Lsi05G016430 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G016430
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Meiotic recombination protein DMC1-like protein
Location	chr05: 24058552 .. 24061539 (-)
RNA-Seq Expression	Lsi05G016430
Synteny	Lsi05G016430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTCAGAGCCGAAGAACAAAGCCAGCAACTACAGCTTGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGCGATTGATAAACGTAAGTTCCAGAGCTTTTAACTTATAATTAAGTTATTGTTTCGCTATTCAAATAATTTAATCCACAACGCTTGTTTCGTGGATCTTAAACGGAACTTGATTTCATGACGTTGTATCTTAATGATCTGCTTGTTATTCTTGGAGTTTGATTCGCAAAACTCCAATTCTGATCAATTTTCTTTTTCCAAAGTGAAATGAGATTACTCATTCGATTGATTCATTCGTTATGAAAGCATAACGGCTCCGGCGGTTTAATTTAGTGATCGTTTCATTTTACGATAGCCTAGCGTCCAGTTTAGCTAGGTTTATATTATCTCGTTGTCTATTTTCTCAAGGCAAGCAATTCTACGAGAGTTTTGCTAAATTCGTGAAGAAATATGCGAATTGTTTTAGCCAATCAACTGACTATCATGTTGCTCCACTACATCCGAAAGAGTTCCTTCGTCATTTTCTGTGCAGTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGACGCAGGGATATACACCTGCAACGGTTTGATGATGCACACGAAGAAGGTAGAACAATTTTCACGTCAAATTCCTTATCTCCTGAATTTGATATGATTGTAATATAATGACCAAGAATTTTGTATTTTAGCACTTGACTGGGATAAAAGGTTTATCCGAGGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGGTGAGCTTCTCAGTCACCACTTCTCTATTATCTACGATACGTACAATGTTTTGCACATTGATGTCATAATGCTATAAACTTCAGCTTTTCTTCAACTAACACTTATCTTTTATCGGTTGCTTTTCAGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTCAGGGTAAGCTGCTTCTGTTATATATTAGTAACAAATGGAGTGTTTAACCAAATAGATCCATATTTCACCAAAAAGTATAGTTAGCATCGTCTCCCCTTTCCTTTTCCGCTTACGGTAGGCTTCGCGTTCGGAAACAACTGTGTTCGATTTCCTTCAGTTGTTCTACCAGCTCCTATAAGTTCAATTTTCAGTAAACTACCGTCCGTCGGAAATGCAGACTTAGTCCTTGATTTTTGTTTGTAGAGAAAGTCCGTGGTTCGCATTACAACTGGAAGCCAGGCTCTCGACGAACTCTTAGGAGGCAAGTCTTGCTTTACGACGTTCCTTTTTTCACTATCTCGCAGATCATAGTTCATAGGCACTAAAGTTGTCGTTCTAATTCTTACTAAAAGGTGGAATTGAAACTCTAGCGATCACGGAAGCTTTTGGAGAATTCAGGTGATGATGTACATATTAATAGTTGCTTCGATTTTGTTTATCGAGAATCGAAGTTCTGTATTTAACTTGCAGCTCTTCTCTGGCTTCGTTAAACGTGCCTAGATCCGGGAAAACGCAACTCGCGCATACTCTATGCGTCTCTACACAGGTTTATCTATGCCTTGGGCTTCACATCTGATCTTTAAATTGAATTCATTTTGTGTAATGATGTATTTCGTTATATGTGCATTAAAAGGAAAACTAAGGGTTAGCGCGTCTTTCTTTTACATCTAATAATTACCGAGCGTTTCTTTCACTGCCTCAAATTTGATGGCATCTTTGCAATTGTGCTTGGCGTTTGCCTTCGCAGCTTCCTACCAGCATGCGGGGAGGGAATGGAAAGGTTGCATACATTGACACTGAAGGCACTTTGTATCCTTTTCTGAAGCTAATTTTATTATGTCGTTGTTGCGGTTTGGGCACGTCCAATGAAATGAAATGATTATTTTTGGAGATGCGCTCCCTTTTCAATATGTCCTCTCCTTAACTACATGCACTTGCAGCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTACTTGACAATGTAAGCACCAGTTTTTTGTGTATAGCTTCTTTCAACCAGAACTGCCGGTTGAAAATCTTTTATTAATTTGCTGCTTGATGAAATAGATCATATATGCTCGTGCCTACACTTACGAACATCAACATAACCTTCTGCTCGGCCTTGCCGCAAAAATGTCTGAAGAACCATTTAAACTTCTGGTGAGTTAGTAGGTAGCCTGTAATTCGAATGTCAAAAACTACGGGGTCTGACATTGTACATTCTATCTCCTAATTGCAGATCGTTGACTCTATCATCGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGCCAGGTCGAATTAAATAGACTTGAACAACAGACGTCGTCGAGAATTTGATTTCCCTAGCTTAATATCATTCGTCCTCTTGTTTCACGTCATTTATGACACTAACTGGTTGTCACATGCAGCAAAAACTAGCGCAAATGCTGTCCCGATTAACTAAAATTGCAGAAGAGTTCAATGTCGCAGTTTACTTGACCAACCAAGGTAGCGATTGAACTTTATGGAAGTCGTTTCTGGTGCTTCATCTGATGTTTATCTCATTCAGTAAACCCAAATATGTTTGCCCATTTTATGGCCAGAGTTTCCCGACCTTCGTACTTGTATTTGCTGGATTGACCGAGACTAAATTGTTTGCCACGGAGTTAAACTGTTGTTTATCATTCACTATGTTGGTTTTACTAAACGTAATCTTATTGTTGACAACAGTCGTTGCAGACCCAGGTGGAGGAGTGTTTGTATCAGATCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCCGCTACAGTAAGATTGATGTTCCGGAAAGGCAAAGGTGAACAACGGATCTGCAAGGTGTTCGATGCCCCTAATTTGCCGGAGTCTGAAGCTATATCCTTAACTCACATCACCTCTCACTTTGACACCTTCATTTACTATTATCTTAACGAGTTCTAA

mRNA sequence

ATGTTGCTCAGAGCCGAAGAACAAAGCCAGCAACTACAGCTTGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGCGATTGATAAACTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGACGCAGGGATATACACCTGCAACGGTTTGATGATGCACACGAAGAAGCACTTGACTGGGATAAAAGGTTTATCCGAGGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTCAGGAGAAAGTCCGTGGTTCGCATTACAACTGGAAGCCAGGCTCTCGACGAACTCTTAGGAGGCAAGTCTTGCTTTACGACCTCTTCTCTGGCTTCGTTAAACGTGCCTAGATCCGGGAAAACGCAACTCGCGCATACTCTATGCGTCTCTACACAGCTTCCTACCAGCATGCGGGGAGGGAATGGAAAGGTTGCATACATTGACACTGAAGGCACTTTCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTACTTGACAATATCATATATGCTCGTGCCTACACTTACGAACATCAACATAACCTTCTGCTCGGCCTTGCCGCAAAAATGTCTGAAGAACCATTTAAACTTCTGATCGTTGACTCTATCATCGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGCCAGCAAAAACTAGCGCAAATGCTGTCCCGATTAACTAAAATTGCAGAAGAGTTCAATGTCGCAGTTTACTTGACCAACCAAGTCGTTGCAGACCCAGGTGGAGGAGTGTTTGTATCAGATCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCCGCTACAGTAAGATTGATGTTCCGGAAAGGCAAAGGTGAACAACGGATCTGCAAGGTGTTCGATGCCCCTAATTTGCCGGAGTCTGAAGCTATATCCTTAACTCACATCACCTCTCACTTTGACACCTTCATTTACTATTATCTTAACGAGTTCTAA

Coding sequence (CDS)

ATGTTGCTCAGAGCCGAAGAACAAAGCCAGCAACTACAGCTTGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGCGATTGATAAACTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGACGCAGGGATATACACCTGCAACGGTTTGATGATGCACACGAAGAAGCACTTGACTGGGATAAAAGGTTTATCCGAGGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTCAGGAGAAAGTCCGTGGTTCGCATTACAACTGGAAGCCAGGCTCTCGACGAACTCTTAGGAGGCAAGTCTTGCTTTACGACCTCTTCTCTGGCTTCGTTAAACGTGCCTAGATCCGGGAAAACGCAACTCGCGCATACTCTATGCGTCTCTACACAGCTTCCTACCAGCATGCGGGGAGGGAATGGAAAGGTTGCATACATTGACACTGAAGGCACTTTCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTACTTGACAATATCATATATGCTCGTGCCTACACTTACGAACATCAACATAACCTTCTGCTCGGCCTTGCCGCAAAAATGTCTGAAGAACCATTTAAACTTCTGATCGTTGACTCTATCATCGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGCCAGCAAAAACTAGCGCAAATGCTGTCCCGATTAACTAAAATTGCAGAAGAGTTCAATGTCGCAGTTTACTTGACCAACCAAGTCGTTGCAGACCCAGGTGGAGGAGTGTTTGTATCAGATCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCCGCTACAGTAAGATTGATGTTCCGGAAAGGCAAAGGTGAACAACGGATCTGCAAGGTGTTCGATGCCCCTAATTTGCCGGAGTCTGAAGCTATATCCTTAACTCACATCACCTCTCACTTTGACACCTTCATTTACTATTATCTTAACGAGTTCTAA

Protein sequence

MLLRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKSCFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHFDTFIYYYLNEF

Homology

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BLAST of Lsi05G016430 vs. ExPASy Swiss-Prot
Match: Q96449 (Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 1.6e-162
Identity = 289/329 (87.84%), Postives = 313/329 (95.14%), Query Frame = 0


Query: 3   LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           L++EE S QLQLVEREDI+D++DLFEAIDKL + GINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKSEESSGQLQLVEREDIDDDEDLFEAIDKLIAQGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 122
           K+LTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL+RKSV+RITTGSQALDELLGG  
Sbjct: 65  KNLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVIRITTGSQALDELLGG-G 124

Query: 123 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
             T++   +    RSGKTQLAHTLCVSTQLPT+MRGGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 125 VETSAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE 184

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF+LLIVDS+IALFRVDF+GRG
Sbjct: 185 RFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFSGRG 244

Query: 243 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 302
           ELA+RQQKLAQMLSRL KIAEEFNVAVY+TNQV++DPGGGVFV+DPKKPAGGHVLAHAAT
Sbjct: 245 ELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVISDPGGGVFVTDPKKPAGGHVLAHAAT 304

Query: 303 VRLMFRKGKGEQRICKVFDAPNLPESEAI 332
           VRLMFRKGKGEQRICKVFDAPNLPE+EA+
Sbjct: 305 VRLMFRKGKGEQRICKVFDAPNLPEAEAV 332

[Close]

BLAST of Lsi05G016430 vs. ExPASy Swiss-Prot
Match: Q39009 (Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DMC1 PE=1 SV=2)

HSP 1 Score: 541.2 bits (1393), Expect = 8.7e-153
Identity = 270/328 (82.32%), Postives = 307/328 (93.60%), Query Frame = 0


Query: 3   LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           L+AEE S Q+QLVERE+ ++++DLFE IDKL + GINAGDVKKLQ+AGI+TCNGLMMHTK
Sbjct: 5   LKAEETS-QMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 122
           K+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSDAL++RKSVV+ITTG QALD+LLGG  
Sbjct: 65  KNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGG-G 124

Query: 123 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
             T++   +    RSGKTQLAHTLCV+TQLPT+M+GGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 125 IETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAE 184

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF++LIVDSIIALFRVDFTGRG
Sbjct: 185 RFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFTGRG 244

Query: 243 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 302
           ELA+RQQKLAQMLSRL KIAEEFNVAVY+TNQV+ADPGGG+F+SDPKKPAGGHVLAHAAT
Sbjct: 245 ELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAAT 304

Query: 303 VRLMFRKGKGEQRICKVFDAPNLPESEA 331
           +RL+FRKGKG+ R+CKV+DAPNL E+EA
Sbjct: 305 IRLLFRKGKGDTRVCKVYDAPNLAEAEA 330

[Close]

BLAST of Lsi05G016430 vs. ExPASy Swiss-Prot
Match: P37384 (Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM15 PE=2 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.5e-152
Identity = 275/329 (83.59%), Postives = 298/329 (90.58%), Query Frame = 0


Query: 4   RAEEQSQQLQLVEREDI-EDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 63
           R  E   QLQL++R++  E+E+D FE+IDKL S GINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 9   RRFESPGQLQLLDRQEAEEEEEDCFESIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTK 68

Query: 64  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 123
           K+LTGIKGLSEAKVDKICEAAEKLVN GYITGSD LL+RKSV+RITTGSQALDELLGG  
Sbjct: 69  KNLTGIKGLSEAKVDKICEAAEKLVNVGYITGSDVLLKRKSVIRITTGSQALDELLGG-G 128

Query: 124 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 183
             T     +    RSGKTQ+AHTLCVSTQLP SM GGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 129 IETLQITEAFGEFRSGKTQIAHTLCVSTQLPVSMHGGNGKVAYIDTEGTFRPDRIVPIAE 188

Query: 184 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 243
           RFGMD  AVLDNIIYARAYTYEHQ+NLLL LAAKMSEEPF+LLIVDS+IALFRVDF+GRG
Sbjct: 189 RFGMDASAVLDNIIYARAYTYEHQYNLLLALAAKMSEEPFRLLIVDSVIALFRVDFSGRG 248

Query: 244 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 303
           ELAERQQKLAQMLSRLTKIAEEFNVAVY+TNQV+ADPGGG+F+SDPKKPAGGHVLAHAAT
Sbjct: 249 ELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAAT 308

Query: 304 VRLMFRKGKGEQRICKVFDAPNLPESEAI 332
           VRLM RKGKGEQR+CK+FDAPNLPESEA+
Sbjct: 309 VRLMLRKGKGEQRVCKIFDAPNLPESEAV 336

[Close]

BLAST of Lsi05G016430 vs. ExPASy Swiss-Prot
Match: Q7EAG4 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39946 GN=DMC1B PE=2 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 7.6e-149
Identity = 264/325 (81.23%), Postives = 295/325 (90.77%), Query Frame = 0


Query: 7   EQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLT 66
           ++  QLQL++ E IE+E++ FE+IDKL S GIN+GDVKKLQDAGIYTCNGLMMHTKK LT
Sbjct: 8   DEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMMHTKKSLT 67

Query: 67  GIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKSCFTT 126
           GIKGLSEAKVDKICEAAEKL++ G++TGSD L++RKSVVRITTGSQALDELLGG    T 
Sbjct: 68  GIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLGG-GIETL 127

Query: 127 SSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGM 186
               +    RSGKTQLAHTLCVSTQLP  M GGNGKVAYIDTEGTFRP+RIVPIAERFGM
Sbjct: 128 CITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGM 187

Query: 187 DPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAE 246
           D  AVLDNIIYARAYTYEHQ+NLLLGLAAKM+EEPF+LLIVDS+IALFRVDF+GRGELAE
Sbjct: 188 DANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSGRGELAE 247

Query: 247 RQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLM 306
           RQQKLAQMLSRLTKIAEEFNVAVY+TNQV+ADPGGG+F++DPKKPAGGHVLAHAAT+RLM
Sbjct: 248 RQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHAATIRLM 307

Query: 307 FRKGKGEQRICKVFDAPNLPESEAI 332
            RKGKGEQR+CK+FDAPNLPE EA+
Sbjct: 308 LRKGKGEQRVCKIFDAPNLPEGEAV 331

[Close]

BLAST of Lsi05G016430 vs. ExPASy Swiss-Prot
Match: Q7GBF7 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=DMC1B PE=2 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 7.6e-149
Identity = 264/325 (81.23%), Postives = 295/325 (90.77%), Query Frame = 0


Query: 7   EQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLT 66
           ++  QLQL++ E IE+E++ FE+IDKL S GIN+GDVKKLQDAGIYTCNGLMMHTKK LT
Sbjct: 8   DEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMMHTKKSLT 67

Query: 67  GIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKSCFTT 126
           GIKGLSEAKVDKICEAAEKL++ G++TGSD L++RKSVVRITTGSQALDELLGG    T 
Sbjct: 68  GIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLGG-GIETL 127

Query: 127 SSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGM 186
               +    RSGKTQLAHTLCVSTQLP  M GGNGKVAYIDTEGTFRP+RIVPIAERFGM
Sbjct: 128 CITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGM 187

Query: 187 DPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAE 246
           D  AVLDNIIYARAYTYEHQ+NLLLGLAAKM+EEPF+LLIVDS+IALFRVDF+GRGELAE
Sbjct: 188 DANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSGRGELAE 247

Query: 247 RQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLM 306
           RQQKLAQMLSRLTKIAEEFNVAVY+TNQV+ADPGGG+F++DPKKPAGGHVLAHAAT+RLM
Sbjct: 248 RQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHAATIRLM 307

Query: 307 FRKGKGEQRICKVFDAPNLPESEAI 332
            RKGKGEQR+CK+FDAPNLPE EA+
Sbjct: 308 LRKGKGEQRVCKIFDAPNLPEGEAV 331

[Close]

BLAST of Lsi05G016430 vs. ExPASy TrEMBL
Match: A0A6J1IBC8 (meiotic recombination protein DMC1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473101 PE=3 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 6.9e-177
Identity = 323/346 (93.35%), Postives = 332/346 (95.95%), Query Frame = 0


Query: 3   LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           L+AEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 6   LKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 65

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 122
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LLRRKSVVRITTGSQALDELLGG  
Sbjct: 66  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLGG-G 125

Query: 123 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
             T +   +    RSGKTQLAHTLCVSTQLPT+MRGGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 126 IETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE 185

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG
Sbjct: 186 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 245

Query: 243 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 302
           ELAERQQKLAQMLSRLTKIAEE+NVAVY+TNQVVADPGGGVFVSDPKKPAGGHVLAHAAT
Sbjct: 246 ELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 305

Query: 303 VRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHFDTFIYYYL 349
           VRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHF TFIY++L
Sbjct: 306 VRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHFITFIYHFL 350

[Close]

BLAST of Lsi05G016430 vs. ExPASy TrEMBL
Match: A0A0A0L5D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145750 PE=3 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 5.8e-176
Identity = 323/339 (95.28%), Postives = 327/339 (96.46%), Query Frame = 0


Query: 1   MLLRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMH 60
           MLLRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMH
Sbjct: 98  MLLRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMH 157

Query: 61  TKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGG 120
           TKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL+RKSVVRITTGSQALDELLGG
Sbjct: 158 TKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGG 217

Query: 121 KSCFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPI 180
               T +   +    RSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPI
Sbjct: 218 -GIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPI 277

Query: 181 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 240
           AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG
Sbjct: 278 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 337

Query: 241 RGELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHA 300
           RGELAERQQKLAQMLSRLTKIAEEFNVAVY+TNQVVADPGGGVFVSDPKKPAGGHVLAHA
Sbjct: 338 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 397

Query: 301 ATVRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSH 340
           ATVRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSH
Sbjct: 398 ATVRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSH 435

[Close]

BLAST of Lsi05G016430 vs. ExPASy TrEMBL
Match: A0A5A7U4Y6 (Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G005680 PE=3 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 5.6e-171
Identity = 312/330 (94.55%), Postives = 317/330 (96.06%), Query Frame = 0


Query: 3   LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           L+AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 122
           KHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL+RKSVVRITTGSQALDELLGGK 
Sbjct: 65  KHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGGKP 124

Query: 123 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
                    L   +SGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 125 ASRLFFFHHLTHHKSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 184

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG
Sbjct: 185 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 244

Query: 243 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 302
           ELAERQQKLAQMLSRLTKIAEEFNVAVY+TNQVVADPGGGVFVSDPKKPAGGHVLAHAAT
Sbjct: 245 ELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 304

Query: 303 VRLMFRKGKGEQRICKVFDAPNLPESEAIS 333
           VRLMFRKGKGEQRICKVFDAPNLPESEAIS
Sbjct: 305 VRLMFRKGKGEQRICKVFDAPNLPESEAIS 334

[Close]

BLAST of Lsi05G016430 vs. ExPASy TrEMBL
Match: A0A6J1CCE5 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica charantia OX=3673 GN=LOC111009434 PE=3 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.3e-170
Identity = 314/337 (93.18%), Postives = 319/337 (94.66%), Query Frame = 0


Query: 3   LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           L+AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 122
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL+RKSVVRITTGSQALDELLGG  
Sbjct: 65  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGG-G 124

Query: 123 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
             T +   +    RSGKTQLAHTLCVSTQLPT MRGGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 125 IETLAITEAFGEFRSGKTQLAHTLCVSTQLPTHMRGGNGKVAYIDTEGTFRPDRIVPIAE 184

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG
Sbjct: 185 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 244

Query: 243 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 302
           ELAERQQKLAQMLSRLTKIAEEFNVAVY+TNQVVADPGGGVFVSDPKKPAGGHVLAHAAT
Sbjct: 245 ELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 304

Query: 303 VRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSH 340
           VRLMFRKGKGEQRICKVFDAPNLPESEAISL     H
Sbjct: 305 VRLMFRKGKGEQRICKVFDAPNLPESEAISLLSXRKH 340

[Close]

BLAST of Lsi05G016430 vs. ExPASy TrEMBL
Match: A0A5D3D096 (Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00830 PE=3 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 6.2e-170
Identity = 312/330 (94.55%), Postives = 318/330 (96.36%), Query Frame = 0


Query: 3   LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           L+AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 122
           KHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL+RKSVVRITTGSQALDELLGG  
Sbjct: 65  KHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGG-G 124

Query: 123 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
             T +   +    RSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 125 IETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 184

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG
Sbjct: 185 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 244

Query: 243 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 302
           ELAERQQKLAQMLSRLTKIAEEFNVAVY+TNQVVADPGGGVFVSDPKKPAGGHVLAHAAT
Sbjct: 245 ELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 304

Query: 303 VRLMFRKGKGEQRICKVFDAPNLPESEAIS 333
           VRLMFRKGKGEQRICKVFDAPNLPESEAIS
Sbjct: 305 VRLMFRKGKGEQRICKVFDAPNLPESEAIS 333

[Close]

BLAST of Lsi05G016430 vs. NCBI nr
Match: XP_022974436.1 (meiotic recombination protein DMC1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 629.8 bits (1623), Expect = 1.4e-176
Identity = 323/346 (93.35%), Postives = 332/346 (95.95%), Query Frame = 0


Query: 3   LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           L+AEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 6   LKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 65

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 122
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LLRRKSVVRITTGSQALDELLGG  
Sbjct: 66  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLGG-G 125

Query: 123 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
             T +   +    RSGKTQLAHTLCVSTQLPT+MRGGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 126 IETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE 185

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG
Sbjct: 186 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 245

Query: 243 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 302
           ELAERQQKLAQMLSRLTKIAEE+NVAVY+TNQVVADPGGGVFVSDPKKPAGGHVLAHAAT
Sbjct: 246 ELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 305

Query: 303 VRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHFDTFIYYYL 349
           VRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHF TFIY++L
Sbjct: 306 VRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHFITFIYHFL 350

[Close]

BLAST of Lsi05G016430 vs. NCBI nr
Match: KAG6597413.1 (hypothetical protein SDJN03_10593, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 629.8 bits (1623), Expect = 1.4e-176
Identity = 322/346 (93.06%), Postives = 332/346 (95.95%), Query Frame = 0


Query: 3   LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           L+AEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 6   LKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 65

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 122
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LLRRKSVVRITTGSQALDELLGG  
Sbjct: 66  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLGG-G 125

Query: 123 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
             T +   +    RSGKTQLAHTLCVSTQLPT+MRGGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 126 IETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE 185

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG
Sbjct: 186 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 245

Query: 243 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 302
           ELAERQQKLAQMLSRLTKIAEE+NVAVY+TNQVVADPGGGVFVSDPKKPAGGHVLAHAAT
Sbjct: 246 ELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 305

Query: 303 VRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHFDTFIYYYL 349
           VRLMFRKGKGEQRICKVFDAPNLPESEAIS THITSHF+TFIY++L
Sbjct: 306 VRLMFRKGKGEQRICKVFDAPNLPESEAISFTHITSHFNTFIYHFL 350

[Close]

BLAST of Lsi05G016430 vs. NCBI nr
Match: XP_031739053.1 (meiotic recombination protein DMC1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 622.5 bits (1604), Expect = 2.3e-174
Identity = 320/337 (94.96%), Postives = 325/337 (96.44%), Query Frame = 0


Query: 3   LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           L+AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 122
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL+RKSVVRITTGSQALDELLGG  
Sbjct: 65  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGG-G 124

Query: 123 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
             T +   +    RSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 125 IETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 184

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG
Sbjct: 185 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 244

Query: 243 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 302
           ELAERQQKLAQMLSRLTKIAEEFNVAVY+TNQVVADPGGGVFVSDPKKPAGGHVLAHAAT
Sbjct: 245 ELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 304

Query: 303 VRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSH 340
           VRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSH
Sbjct: 305 VRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSH 340

[Close]

BLAST of Lsi05G016430 vs. NCBI nr
Match: KAA0049326.1 (meiotic recombination protein DMC1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 610.1 bits (1572), Expect = 1.2e-170
Identity = 312/330 (94.55%), Postives = 317/330 (96.06%), Query Frame = 0


Query: 3   LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           L+AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 122
           KHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALL+RKSVVRITTGSQALDELLGGK 
Sbjct: 65  KHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGGKP 124

Query: 123 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
                    L   +SGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 125 ASRLFFFHHLTHHKSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 184

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG
Sbjct: 185 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 244

Query: 243 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 302
           ELAERQQKLAQMLSRLTKIAEEFNVAVY+TNQVVADPGGGVFVSDPKKPAGGHVLAHAAT
Sbjct: 245 ELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 304

Query: 303 VRLMFRKGKGEQRICKVFDAPNLPESEAIS 333
           VRLMFRKGKGEQRICKVFDAPNLPESEAIS
Sbjct: 305 VRLMFRKGKGEQRICKVFDAPNLPESEAIS 334

[Close]

BLAST of Lsi05G016430 vs. NCBI nr
Match: XP_022138203.1 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog [Momordica charantia])

HSP 1 Score: 609.0 bits (1569), Expect = 2.6e-170
Identity = 314/337 (93.18%), Postives = 319/337 (94.66%), Query Frame = 0


Query: 3   LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           L+AEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 122
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALL+RKSVVRITTGSQALDELLGG  
Sbjct: 65  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGG-G 124

Query: 123 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
             T +   +    RSGKTQLAHTLCVSTQLPT MRGGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 125 IETLAITEAFGEFRSGKTQLAHTLCVSTQLPTHMRGGNGKVAYIDTEGTFRPDRIVPIAE 184

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG
Sbjct: 185 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 244

Query: 243 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 302
           ELAERQQKLAQMLSRLTKIAEEFNVAVY+TNQVVADPGGGVFVSDPKKPAGGHVLAHAAT
Sbjct: 245 ELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 304

Query: 303 VRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSH 340
           VRLMFRKGKGEQRICKVFDAPNLPESEAISL     H
Sbjct: 305 VRLMFRKGKGEQRICKVFDAPNLPESEAISLLSXRKH 340

[Close]

BLAST of Lsi05G016430 vs. TAIR 10
Match: AT3G22880.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 541.2 bits (1393), Expect = 6.2e-154
Identity = 270/328 (82.32%), Postives = 307/328 (93.60%), Query Frame = 0


Query: 3   LRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           L+AEE S Q+QLVERE+ ++++DLFE IDKL + GINAGDVKKLQ+AGI+TCNGLMMHTK
Sbjct: 5   LKAEETS-QMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKS 122
           K+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSDAL++RKSVV+ITTG QALD+LLGG  
Sbjct: 65  KNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGG-G 124

Query: 123 CFTTSSLASLNVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
             T++   +    RSGKTQLAHTLCV+TQLPT+M+GGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 125 IETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAE 184

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF++LIVDSIIALFRVDFTGRG
Sbjct: 185 RFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFTGRG 244

Query: 243 ELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 302
           ELA+RQQKLAQMLSRL KIAEEFNVAVY+TNQV+ADPGGG+F+SDPKKPAGGHVLAHAAT
Sbjct: 245 ELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAAT 304

Query: 303 VRLMFRKGKGEQRICKVFDAPNLPESEA 331
           +RL+FRKGKG+ R+CKV+DAPNL E+EA
Sbjct: 305 IRLLFRKGKGDTRVCKVYDAPNLAEAEA 330

[Close]

BLAST of Lsi05G016430 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 )

HSP 1 Score: 298.5 bits (763), Expect = 7.0e-81
Identity = 163/326 (50.00%), Postives = 217/326 (66.56%), Query Frame = 0


Query: 7   EQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLT 66
           EQ +    V+++D E+       +++L + GI + DVKKL+DAG+ T  G+    +K L 
Sbjct: 5   EQRRNQNAVQQQDDEETQHGPFPVEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPRKDLL 64

Query: 67  GIKGLSEAKVDKICEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGKSCFTT 126
            IKG+S+AKVDKI EAA KLV  G+ + S    +R+ +++IT+GS+ LD++L G     T
Sbjct: 65  QIKGISDAKVDKIVEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKVLEGG--IET 124

Query: 127 SSLASL-NVPRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFG 186
            S+  L    RSGKTQL HTLCV+ QLP    GG GK  YID EGTFRP R++ IA+RFG
Sbjct: 125 GSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 184

Query: 187 MDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELA 246
           ++   VL+N+ YARAY  +HQ  LLL  A+ M E  F LLIVDS  AL+R DF+GRGEL+
Sbjct: 185 LNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGELS 244

Query: 247 ERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPK-KPAGGHVLAHAATVR 306
            RQ  LA+ L  L K+A+EF VAV +TNQVVA   G    + P+ KP GG+++AHA T R
Sbjct: 245 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTR 304

Query: 307 LMFRKGKGEQRICKVFDAPNLPESEA 331
           L  RKG+ E+RICKV  +P LPE+EA
Sbjct: 305 LALRKGRAEERICKVISSPCLPEAEA 328

[Close]

BLAST of Lsi05G016430 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-25
Identity = 91/273 (33.33%), Postives = 135/273 (49.45%), Query Frame = 0


Query: 80  CEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGK-SCFTTSSLASLNVPRSG 139
           C  +  L+N G     D L   +S+ RITT    LD +LGG  SC   + +    VP  G
Sbjct: 79  CNGSRSLIN-GAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIG--GVPGIG 138

Query: 140 KTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE---------------- 199
           KTQ+   L V+ Q+P    G  GK  YIDTEG+F  +R + IAE                
Sbjct: 139 KTQIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKH 198

Query: 200 ----RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVDSIIALFRVD 259
               +  M P  +L+NI Y R  +Y  Q  L+  L   +SE +  K++IVDSI   FR D
Sbjct: 199 FQANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQD 258

Query: 260 FTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVL 319
           +    +LA+R + L++M  +  K+A++F++AV L NQV      G F       A G   
Sbjct: 259 Y---DDLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSF---QLALALGDSW 318

Query: 320 AHAATVRLMFRKGKGEQRICKVFDAPNLPESEA 331
           +H+ T R++     G++R   +  +P+LP + A
Sbjct: 319 SHSCTNRVIL-YWNGDERYAYIDKSPSLPSASA 341

[Close]

BLAST of Lsi05G016430 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-25
Identity = 91/273 (33.33%), Postives = 135/273 (49.45%), Query Frame = 0


Query: 80  CEAAEKLVNFGYITGSDALLRRKSVVRITTGSQALDELLGGK-SCFTTSSLASLNVPRSG 139
           C  +  L+N G     D L   +S+ RITT    LD +LGG  SC   + +    VP  G
Sbjct: 103 CNGSRSLIN-GAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIG--GVPGIG 162

Query: 140 KTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE---------------- 199
           KTQ+   L V+ Q+P    G  GK  YIDTEG+F  +R + IAE                
Sbjct: 163 KTQIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKH 222

Query: 200 ----RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVDSIIALFRVD 259
               +  M P  +L+NI Y R  +Y  Q  L+  L   +SE +  K++IVDSI   FR D
Sbjct: 223 FQANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQD 282

Query: 260 FTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYLTNQVVADPGGGVFVSDPKKPAGGHVL 319
           +    +LA+R + L++M  +  K+A++F++AV L NQV      G F       A G   
Sbjct: 283 Y---DDLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSF---QLALALGDSW 342

Query: 320 AHAATVRLMFRKGKGEQRICKVFDAPNLPESEA 331
           +H+ T R++     G++R   +  +P+LP + A
Sbjct: 343 SHSCTNRVIL-YWNGDERYAYIDKSPSLPSASA 365

[Close]

BLAST of Lsi05G016430 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-13
Identity = 55/200 (27.50%), Postives = 100/200 (50.00%), Query Frame = 0


Query: 90  GYITGSDALLRRKSVVRITTGSQALDELL-GGKSCFTTSSLASLNVPRSGKTQLAHTLCV 149
           G I   + L R  +  ++TTG + LD  L GG SC + + + + +    GKTQL   L +
Sbjct: 4   GKIKPENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAES--GCGKTQLCLQLSL 63

Query: 150 STQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV--------LDNIIYARA 209
            TQLP S  G NG   Y+ +E  F   R+  ++  F     ++         D++     
Sbjct: 64  CTQLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNV 123

Query: 210 YTYEHQHNLLLGLAAKMSEE----PFKLLIVDSIIALFRVDFTGR-GELAERQQKLAQML 269
           ++ +H  +++  +   +       P KL+++DS+ ALFR +F     +L +R     ++ 
Sbjct: 124 HSVDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKIS 183

Query: 270 SRLTKIAEEFNVAVYLTNQV 276
            +L ++A +F++A+ +TNQV
Sbjct: 184 GKLKQLASKFDLAIVITNQV 201

The following BLAST results are available for this feature:

BLAST of Lsi05G016430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96449	1.6e-162	87.84	Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q39009	8.7e-153	82.32	Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DM...	[more]
P37384	1.5e-152	83.59	Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM1...	[more]
Q7EAG4	7.6e-149	81.23	Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39...	[more]
Q7GBF7	7.6e-149	81.23	Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of Lsi05G016430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IBC8	6.9e-177	93.35	meiotic recombination protein DMC1 homolog isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A0A0L5D5	5.8e-176	95.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145750 PE=3 SV=1	[more]
A0A5A7U4Y6	5.6e-171	94.55	Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1CCE5	1.3e-170	93.18	LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica cha...	[more]
A0A5D3D096	6.2e-170	94.55	Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Lsi05G016430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974436.1	1.4e-176	93.35	meiotic recombination protein DMC1 homolog isoform X1 [Cucurbita maxima]	[more]
KAG6597413.1	1.4e-176	93.06	hypothetical protein SDJN03_10593, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_031739053.1	2.3e-174	94.96	meiotic recombination protein DMC1 homolog isoform X1 [Cucumis sativus]	[more]
KAA0049326.1	1.2e-170	94.55	meiotic recombination protein DMC1-like protein [Cucumis melo var. makuwa]	[more]
XP_022138203.1	2.6e-170	93.18	LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog [Momordica chara...	[more]

BLAST of Lsi05G016430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22880.1	6.2e-154	82.32	DNA repair (Rad51) family protein	[more]
AT5G20850.1	7.0e-81	50.00	RAS associated with diabetes protein 51	[more]
AT2G45280.1	1.1e-25	33.33	RAS associated with diabetes protein 51C	[more]
AT2G45280.2	1.1e-25	33.33	RAS associated with diabetes protein 51C	[more]
AT5G57450.1	1.6e-13	27.50	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 90..331 e-value: 2.3E-99 score: 331.8
IPR011940	Meiotic recombination protein Dmc1	TIGRFAM	TIGR02238	TIGR02238	coord: 30..331 e-value: 2.0E-149 score: 494.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 90..341 e-value: 1.1E-74 score: 253.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 106..330
IPR016467	DNA recombination and repair protein, RecA-like	PIRSF	PIRSF005856	Rad51	coord: 16..337 e-value: 1.5E-119 score: 396.8
None	No IPR available	GENE3D	1.10.150.20		coord: 7..89 e-value: 3.4E-30 score: 105.8
None	No IPR available	PANTHER	PTHR22942:SF64	MEIOTIC RECOMBINATION PROTEIN DMC1-LIKE PROTEIN	coord: 14..333
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 14..333
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 103..275 score: 34.780872
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 281..330 score: 15.767197
IPR033925	Rad51/DMC1/RadA	CDD	cd01123	Rad51_DMC1_radA	coord: 107..330 e-value: 1.11761E-116 score: 335.708
IPR010995	DNA repair Rad51/transcription factor NusA, alpha-helical	SUPERFAMILY	47794	Rad51 N-terminal domain-like	coord: 22..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G016430.1	Lsi05G016430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070192	chromosome organization involved in meiotic cell cycle
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0042148	strand invasion
biological_process	GO:0000730	DNA recombinase assembly
biological_process	GO:0006281	DNA repair
cellular_component	GO:0000794	condensed nuclear chromosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0000150	DNA strand exchange activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000166	nucleotide binding