Lsi05G015470 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G015470
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	phylloplanin-like
Location	chr05: 23241732 .. 23243561 (-)
RNA-Seq Expression	Lsi05G015470
Synteny	Lsi05G015470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTATTGCCTATATATATTGGCATTGAAGGAATGTGAGTTTGGAAGGAAGATCATAAGATAAAAAAGAAAAGAAAAAAATGGGTTATTTGAAATCAATTTTATTTGTTTTGGTGATAATTAGTGGTATTGGAGCAGCTCCATTAATGGTGGAAGCTCAGCTTGGGATTATTGGCAGTCTCCTTGGCCTTATCAGAATCCAAGGAACTGTTTTTTGCACTGCCAATGGCAACATTGGCATCAATGGCACTGCCACTCCTATTTTCCCAGGTATGCTATTTTCACAAAATTTTGTTTGATAATTATTTTTTTTTTAATTTTTTTTCTACTTAGATCTTTTAATAATTCTCATCTTTGTTAAATAAATAAGTTAATTTTTAGTCGATTTCTAAATTTCAAAACCTACTTTCTTTTTCTTTTTTTTTCTTTTTTCAAAATTTGGCTTAATTTTTTAAAATACTTACGAAAGTAGATTACATTAAATTGTTTAATAAACTTAATTTTTCAAAAATTAAAAATTAAAAACCAAATAATTATTAAAAAAGATCTTACTTTTTTTCTTTTTTCAATTTTGTTTAGGTCCATGAACTTTTATATATTATAAATTAAAGTTGAGAAATTTTCACTACAAAAAAAAAATGTCAAACCATTTACAGAAAATAGTAAAAGAAATACTGATAGACATTGATAGACTTCTACCAACGTCTATCCATGATAAACTTCTATCATTTCTATCACTGATAGACCCTGATAGACTTCCTATCAACGTCTATTATAGCCATCTAAAAATTTTGCTATGTTGTGTGAATAATTTTCCTTATTTTTCTATTTTTAAAAATTTCTCATTGAAGTTATTATTATTATTTTTTTTTTACGAATATGTAATGTAATGTTATTTTTACTTAGATTTTAAGTACTAGATTTAAAATAGTTAATGATTAGGTGCAAGTGCACTTAATCCCATGTATTTCTTTTTTATACATAATAATTTTTTATTTTTTTTAAAATGAACGTTATTGTCTAGGCTGCACAATCGATCAGTGCAACTCAAAATGCACTCAAATTTTTTTCTTTTAAAAATACAGATGGTCCAAGATGGACAAAAAAAGATTTTAACATGCAACAAAATTTAAAATGACTATATTAATGATTTGTGTTTGAAGAATTACTCCATAAAAAAAAAAAGTTCAGAGATTAAGATATGATTTTATGCAGATGCATCAGTACAGTTGCAGTGTGGAAATGGGAACATTGTGTCAACTACAACAACAAATAACATGGGAAACTTTTCGATGTTGTTAAATCCTTTACAGTTCCTTCTCTCTGTAATCACAAACAAATGCAACGTCGTAGTTAATACGCCGCTGTCCAATTGCAATGCGACATTACCGTCTACCGGAGTTCTATTTTCGTCATTGGGTTTCGTCGGAAAAACGATAGAGGGCATCCTCAACATCATGAACGTAGTCCCCAACGGATTCCAGTTCCTGCCATCTCTTTAAAATGCCAGCCATTGGCTAAATATATTTACAAAAGGGGATAAGGAATAACAAGAATATTTGAGTTTTTACTACTTTCGTCTAATGTTGTTTTATGTCAGTTGTGAGTTCTCTCTCAAAGTTGATTGAGTTCTGTTGTTGTTTGTTATTGTATTTATGCATGTCTGTTGTTGCTGTTTGTTATTGTGTTTATGCATGTTTGTTGTTGGTTGTTCATTCCAAAAATAAAAGGTTGTGTGTTTTGTTGTTGTTCTTATAGCTATTTCAAAGTGGGGTTAATGTAATACTATTATAATTTAAAAAAATATATATATAGTTTGTTTCGTGGGTTA

mRNA sequence

GGTTATTGCCTATATATATTGGCATTGAAGGAATGTGAGTTTGGAAGGAAGATCATAAGATAAAAAAGAAAAGAAAAAAATGGGTTATTTGAAATCAATTTTATTTGTTTTGGTGATAATTAGTGGTATTGGAGCAGCTCCATTAATGGTGGAAGCTCAGCTTGGGATTATTGGCAGTCTCCTTGGCCTTATCAGAATCCAAGGAACTGTTTTTTGCACTGCCAATGGCAACATTGGCATCAATGGCACTGCCACTCCTATTTTCCCAGATGCATCAGTACAGTTGCAGTGTGGAAATGGGAACATTGTGTCAACTACAACAACAAATAACATGGGAAACTTTTCGATGTTGTTAAATCCTTTACAGTTCCTTCTCTCTGTAATCACAAACAAATGCAACGTCGTAGTTAATACGCCGCTGTCCAATTGCAATGCGACATTACCGTCTACCGGAGTTCTATTTTCGTCATTGGGTTTCGTCGGAAAAACGATAGAGGGCATCCTCAACATCATGAACGTAGTCCCCAACGGATTCCAGTTCCTGCCATCTCTTTAAAATGCCAGCCATTGGCTAAATATATTTACAAAAGGGGATAAGGAATAACAAGAATATTTGAGTTTTTACTACTTTCGTCTAATGTTGTTTTATGTCAGTTGTGAGTTCTCTCTCAAAGTTGATTGAGTTCTGTTGTTGTTTGTTATTGTATTTATGCATGTCTGTTGTTGCTGTTTGTTATTGTGTTTATGCATGTTTGTTGTTGGTTGTTCATTCCAAAAATAAAAGGTTGTGTGTTTTGTTGTTGTTCTTATAGCTATTTCAAAGTGGGGTTAATGTAATACTATTATAATTTAAAAAAATATATATATAGTTTGTTTCGTGGGTTA

Coding sequence (CDS)

ATGGGTTATTTGAAATCAATTTTATTTGTTTTGGTGATAATTAGTGGTATTGGAGCAGCTCCATTAATGGTGGAAGCTCAGCTTGGGATTATTGGCAGTCTCCTTGGCCTTATCAGAATCCAAGGAACTGTTTTTTGCACTGCCAATGGCAACATTGGCATCAATGGCACTGCCACTCCTATTTTCCCAGATGCATCAGTACAGTTGCAGTGTGGAAATGGGAACATTGTGTCAACTACAACAACAAATAACATGGGAAACTTTTCGATGTTGTTAAATCCTTTACAGTTCCTTCTCTCTGTAATCACAAACAAATGCAACGTCGTAGTTAATACGCCGCTGTCCAATTGCAATGCGACATTACCGTCTACCGGAGTTCTATTTTCGTCATTGGGTTTCGTCGGAAAAACGATAGAGGGCATCCTCAACATCATGAACGTAGTCCCCAACGGATTCCAGTTCCTGCCATCTCTTTAA

Protein sequence

MGYLKSILFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFPDASVQLQCGNGNIVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPSTGVLFSSLGFVGKTIEGILNIMNVVPNGFQFLPSL

Homology

[Close]

BLAST of Lsi05G015470 vs. ExPASy Swiss-Prot
Match: Q56S59 (Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-18
Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 8   LFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIG-INGTATPIFPDAS 67
           +F++ +++ + A P    A   I+   L    I G VFC+ NGN+  ING +  +FP+AS
Sbjct: 6   IFLIFLLAALIATP----AAFAILVPTLVSTHISGLVFCSVNGNLDVINGLSPQVFPNAS 65

Query: 68  VQLQCGNGNIVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPSTGV 127
           VQL+CG  N++S+T TN  G FS+ +N    L       CN+VV TPLS CNATL S G 
Sbjct: 66  VQLRCGATNVISSTITNGSGAFSLAVNTFPLL------NCNLVVATPLSTCNATLQSVGR 125

Query: 128 LFSSLGFVGKTI---EGILNIMNVVPNGF 153
           L SSL  V  T+    G++ +  + P GF
Sbjct: 126 LASSLRLVNITLGSGTGLIRV-GLAPTGF 143

[Close]

BLAST of Lsi05G015470 vs. ExPASy TrEMBL
Match: A0A6J1C7T1 (phylloplanin-like OS=Momordica charantia OX=3673 GN=LOC111009161 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.6e-53
Identity = 110/152 (72.37%), Postives = 135/152 (88.82%), Query Frame = 0


Query: 4   LKSILFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFP 63
           L+S+L VLV+ + +G APLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATP+FP
Sbjct: 3   LRSVLLVLVMAAAVG-APLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPVFP 62

Query: 64  DASVQLQCGNGNIVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPS 123
           +A+VQ++CG+GN+VS+ TTNNMG FS+LL+PLQF+LS + N CNVVV TPLSNCNA+LPS
Sbjct: 63  NAAVQMECGDGNVVSSVTTNNMGIFSILLDPLQFILSSVLNNCNVVVKTPLSNCNASLPS 122

Query: 124 TGVLFSSLGFVGKTIEGILNIMNVVPNGFQFL 156
           TG L S L FV K ++G+L+I+N+VP+GFQ L
Sbjct: 123 TGSLLSRLQFVSKKLQGLLSIVNLVPSGFQLL 153

[Close]

BLAST of Lsi05G015470 vs. ExPASy TrEMBL
Match: A0A6J1FBV3 (phylloplanin-like OS=Cucurbita moschata OX=3662 GN=LOC111444198 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.3e-50
Identity = 105/154 (68.18%), Postives = 127/154 (82.47%), Query Frame = 0


Query: 4   LKSILFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFP 63
           LKS+LFV V+++ +GA  ++VEAQLG IGSLL L RIQGTVFCTANGNIG NGTATP FP
Sbjct: 3   LKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLARIQGTVFCTANGNIGTNGTATPAFP 62

Query: 64  DASVQLQCGNGNIVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPS 123
           +A+VQLQCGNGN+VST TTN+ G FS+LL+PLQ LLS +T+ C+VVVNTPLS+CNATLPS
Sbjct: 63  NAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATLPS 122

Query: 124 TGVLFSSLGFVGKTIEGILNIMNVVPNGFQFLPS 158
            G L S+L  VG T +G+L I N++P GF F PS
Sbjct: 123 VGNLVSALNLVGMTFQGLLRITNIIPTGFMFQPS 156

[Close]

BLAST of Lsi05G015470 vs. ExPASy TrEMBL
Match: A0A6J1IE70 (phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111472350 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.0e-50
Identity = 104/154 (67.53%), Postives = 127/154 (82.47%), Query Frame = 0


Query: 4   LKSILFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFP 63
           LKS+LFVLV+ + +GA  ++ EAQLG IGSLL L RIQGTVFCTA+GNIG NGTATPIFP
Sbjct: 3   LKSVLFVLVMAAAMGAPLMVAEAQLGSIGSLLSLTRIQGTVFCTADGNIGANGTATPIFP 62

Query: 64  DASVQLQCGNGNIVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPS 123
           +A+VQLQCGNGN+VST TTN+ G F +LLNPLQFLLS +T+ C+V+VNTPLS+CNATLPS
Sbjct: 63  NAAVQLQCGNGNVVSTATTNSAGMFLILLNPLQFLLSSLTSNCSVLVNTPLSSCNATLPS 122

Query: 124 TGVLFSSLGFVGKTIEGILNIMNVVPNGFQFLPS 158
            G L S L F G  ++G+L+I N++P GF F PS
Sbjct: 123 VGNLVSGLNFAGTILQGLLSITNIIPRGFTFQPS 156

[Close]

BLAST of Lsi05G015470 vs. ExPASy TrEMBL
Match: A0A4S4DKV4 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_012208 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.5e-49
Identity = 101/155 (65.16%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 4   LKSILFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFP 63
           LKS+L V ++I+ + A P M EAQLG+I  LLGLIRIQGTVFCTANGN+G+NGT+TP+FP
Sbjct: 3   LKSLLLVFLLIAALTAVP-MAEAQLGLISGLLGLIRIQGTVFCTANGNMGVNGTSTPVFP 62

Query: 64  DASVQLQCGNGNIVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPS 123
            A VQLQCG GN VS+ TTNN G FSM+L+PLQF+LS + + CN++VNTPLSNCN  LPS
Sbjct: 63  YAKVQLQCGAGNTVSSATTNNFGIFSMVLDPLQFVLSSLLSNCNLLVNTPLSNCNLNLPS 122

Query: 124 TGVLFSSLGFVGKTIEGILNIMNVVPNGFQFLPSL 159
            G L S L F+G T++G+LNI N++P+GFQFLP+L
Sbjct: 123 VGGLLSPLQFIGNTLQGLLNISNIIPSGFQFLPNL 156

[Close]

BLAST of Lsi05G015470 vs. ExPASy TrEMBL
Match: A0A7J7GYZ1 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_018763 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 9.3e-49
Identity = 100/155 (64.52%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 4   LKSILFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFP 63
           LKS+L V ++I+ + A P M EAQLG+I  LLGLIRIQGTVFCTANGN+G+NGT+TP+FP
Sbjct: 3   LKSLLLVFLLIAALTAVP-MAEAQLGLISGLLGLIRIQGTVFCTANGNMGVNGTSTPVFP 62

Query: 64  DASVQLQCGNGNIVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPS 123
           +A VQLQCG GN VS+ TTNN G FSM+L+PLQF+LS + + CN++VNTPLSNCN  L S
Sbjct: 63  NAKVQLQCGAGNTVSSATTNNFGIFSMVLDPLQFVLSSLLSNCNLLVNTPLSNCNLNLHS 122

Query: 124 TGVLFSSLGFVGKTIEGILNIMNVVPNGFQFLPSL 159
            G L S L F+G T++G+LNI N++P+GFQFLP+L
Sbjct: 123 VGGLLSPLQFIGNTLQGLLNISNIIPSGFQFLPNL 156

[Close]

BLAST of Lsi05G015470 vs. NCBI nr
Match: XP_038903470.1 (phylloplanin-like [Benincasa hispida])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 132/155 (85.16%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 4   LKSILFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFP 63
           LKS+LFVLVI+  +G APLMVEAQLGI+GSLLGLIRIQGTVFCTANGNIGINGTATPIFP
Sbjct: 3   LKSVLFVLVIVGAMG-APLMVEAQLGIVGSLLGLIRIQGTVFCTANGNIGINGTATPIFP 62

Query: 64  DASVQLQCGNGNIVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPS 123
           +ASVQLQCGNGNIVSTTTTNNMG FS+LLNPLQFLLS+IT+ C+ VVNTPLSNCN TLPS
Sbjct: 63  NASVQLQCGNGNIVSTTTTNNMGVFSILLNPLQFLLSLITSSCSTVVNTPLSNCNVTLPS 122

Query: 124 TGVLFSSLGFVGKTIEGILNIMNVVPNGFQFLPSL 159
           TGVL S LGFVG+T+EGILNI+NV PNGF+FLPSL
Sbjct: 123 TGVLLSRLGFVGQTMEGILNILNVAPNGFEFLPSL 156

[Close]

BLAST of Lsi05G015470 vs. NCBI nr
Match: XP_022137816.1 (phylloplanin-like [Momordica charantia])

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-53
Identity = 110/152 (72.37%), Postives = 135/152 (88.82%), Query Frame = 0


Query: 4   LKSILFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFP 63
           L+S+L VLV+ + +G APLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATP+FP
Sbjct: 3   LRSVLLVLVMAAAVG-APLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPVFP 62

Query: 64  DASVQLQCGNGNIVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPS 123
           +A+VQ++CG+GN+VS+ TTNNMG FS+LL+PLQF+LS + N CNVVV TPLSNCNA+LPS
Sbjct: 63  NAAVQMECGDGNVVSSVTTNNMGIFSILLDPLQFILSSVLNNCNVVVKTPLSNCNASLPS 122

Query: 124 TGVLFSSLGFVGKTIEGILNIMNVVPNGFQFL 156
           TG L S L FV K ++G+L+I+N+VP+GFQ L
Sbjct: 123 TGSLLSRLQFVSKKLQGLLSIVNLVPSGFQLL 153

[Close]

BLAST of Lsi05G015470 vs. NCBI nr
Match: XP_022937971.1 (phylloplanin-like [Cucurbita moschata])

HSP 1 Score: 209.1 bits (531), Expect = 2.7e-50
Identity = 105/154 (68.18%), Postives = 127/154 (82.47%), Query Frame = 0


Query: 4   LKSILFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFP 63
           LKS+LFV V+++ +GA  ++VEAQLG IGSLL L RIQGTVFCTANGNIG NGTATP FP
Sbjct: 3   LKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLARIQGTVFCTANGNIGTNGTATPAFP 62

Query: 64  DASVQLQCGNGNIVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPS 123
           +A+VQLQCGNGN+VST TTN+ G FS+LL+PLQ LLS +T+ C+VVVNTPLS+CNATLPS
Sbjct: 63  NAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATLPS 122

Query: 124 TGVLFSSLGFVGKTIEGILNIMNVVPNGFQFLPS 158
            G L S+L  VG T +G+L I N++P GF F PS
Sbjct: 123 VGNLVSALNLVGMTFQGLLRITNIIPTGFMFQPS 156

[Close]

BLAST of Lsi05G015470 vs. NCBI nr
Match: XP_023522114.1 (phylloplanin-like [Cucurbita pepo subsp. pepo] >XP_023540360.1 phylloplanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.4 bits (529), Expect = 4.6e-50
Identity = 105/154 (68.18%), Postives = 127/154 (82.47%), Query Frame = 0


Query: 4   LKSILFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFP 63
           LKS+LFV V+++ +GA  ++VEAQLG IGSLL L RIQGTVFCTANGNIG NGTATP FP
Sbjct: 3   LKSVLFVCVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPAFP 62

Query: 64  DASVQLQCGNGNIVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPS 123
           +A+VQLQCGNGN+VST TTN+ G FS+LL+PLQ LLS +T+ C+VVVNTPLS+CNATLPS
Sbjct: 63  NAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSLTSNCSVVVNTPLSSCNATLPS 122

Query: 124 TGVLFSSLGFVGKTIEGILNIMNVVPNGFQFLPS 158
            G L S+L  VG T +G+L I N++P GF F PS
Sbjct: 123 VGNLVSALNLVGMTFQGLLRITNIIPTGFMFQPS 156

[Close]

BLAST of Lsi05G015470 vs. NCBI nr
Match: KAG6597529.1 (hypothetical protein SDJN03_10709, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028986.1 hypothetical protein SDJN02_10169 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208.0 bits (528), Expect = 6.0e-50
Identity = 105/154 (68.18%), Postives = 127/154 (82.47%), Query Frame = 0


Query: 4   LKSILFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFP 63
           LKS+LFV V+++ +GA  ++VEAQLG IGSLL L RIQGTVFCTANGNIG NGTATP FP
Sbjct: 3   LKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPAFP 62

Query: 64  DASVQLQCGNGNIVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPS 123
           +A+VQLQCGNGN+VST TTN+ G FS+LL+PLQ LLS +T+ C+VVVNTPLS+CNATLPS
Sbjct: 63  NAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATLPS 122

Query: 124 TGVLFSSLGFVGKTIEGILNIMNVVPNGFQFLPS 158
            G L S+L  VG T +G+L I N++P GF F PS
Sbjct: 123 VGNLVSALNLVGMTFQGLLRITNIIPTGFIFQPS 156

[Close]

BLAST of Lsi05G015470 vs. TAIR 10
Match: AT3G16660.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 122.5 bits (306), Expect = 3.1e-28
Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 29  GIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFPDASVQLQCGNGN-IVSTTTTNNMGN 88
           G++G +L L+ I G VFC+ NG    +GT+TP F +A V+LQCG  N +VST TTN  G 
Sbjct: 54  GLVGGILNLVNINGVVFCSLNG--APSGTSTPAFANAGVELQCGRQNRVVSTATTNAAGL 113

Query: 89  FSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPSTGVLFSSLGFVGKTIEGILNIMNV 148
           FS+  + +Q LLS + + C VVV TPLS CNA LPS G L S L  +G ++ G+LNI+++
Sbjct: 114 FSLPTDSIQMLLSTLLSDCRVVVTTPLSTCNANLPSVGNLVSRLAMIGNSLTGLLNIISI 173

Query: 149 VPNGFQFL 156
           +P GF  L
Sbjct: 174 IPAGFGLL 179

[Close]

BLAST of Lsi05G015470 vs. TAIR 10
Match: AT3G16670.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 69/149 (46.31%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 5   KSILFVLVIISGIGAAPLMVEAQLGIIGSLLGLIRIQGTVFCTANGNIGINGTATPIFPD 64
           K I F LV++  I  +P M  AQ G+ G  + +  I G +FCT NG   +NGT  P F +
Sbjct: 6   KHITFSLVLLCLIVVSP-MANAQSGLGG--INVPIINGVLFCTING-APLNGTPAPAFAN 65

Query: 65  ASVQLQCGNGN-IVSTTTTNNMGNFSMLLNPLQFLLSVITNKCNVVVNTPLSNCNATLPS 124
           A VQLQCGN N +V+ T TN  G F+   N +Q  L  + N C +VV TP S+C+ATLPS
Sbjct: 66  AVVQLQCGNLNRVVAETITNIAGLFTFSTNGIQISLPTLLNDCRIVVPTPRSSCDATLPS 125

Query: 125 TGVLFSSLGFVGKTIEGILNIMNVVPNGF 153
           TG L S L  VG  + G+LNI+ ++P GF
Sbjct: 126 TGQLISQLNLVGSIVSGLLNIVAILPTGF 150

The following BLAST results are available for this feature:

BLAST of Lsi05G015470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56S59	1.3e-18	40.94	Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]

BLAST of Lsi05G015470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C7T1	1.6e-53	72.37	phylloplanin-like OS=Momordica charantia OX=3673 GN=LOC111009161 PE=4 SV=1	[more]
A0A6J1FBV3	1.3e-50	68.18	phylloplanin-like OS=Cucurbita moschata OX=3662 GN=LOC111444198 PE=4 SV=1	[more]
A0A6J1IE70	5.0e-50	67.53	phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111472350 PE=4 SV=1	[more]
A0A4S4DKV4	2.5e-49	65.16	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0122...	[more]
A0A7J7GYZ1	9.3e-49	64.52	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_018763 PE=4 SV=1	[more]

BLAST of Lsi05G015470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903470.1	1.1e-64	85.16	phylloplanin-like [Benincasa hispida]	[more]
XP_022137816.1	3.4e-53	72.37	phylloplanin-like [Momordica charantia]	[more]
XP_022937971.1	2.7e-50	68.18	phylloplanin-like [Cucurbita moschata]	[more]
XP_023522114.1	4.6e-50	68.18	phylloplanin-like [Cucurbita pepo subsp. pepo] >XP_023540360.1 phylloplanin-like...	[more]
KAG6597529.1	6.0e-50	68.18	hypothetical protein SDJN03_10709, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lsi05G015470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16660.1	3.1e-28	49.22	Pollen Ole e 1 allergen and extensin family protein	[more]
AT3G16670.1	1.2e-24	46.31	Pollen Ole e 1 allergen and extensin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_1	coord: 40..120 e-value: 3.9E-6 score: 27.2
None	No IPR available	PANTHER	PTHR34458:SF5	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN	coord: 5..155
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 35..129 e-value: 3.6E-5 score: 25.9
IPR040404	Phylloplanin-like	PANTHER	PTHR34458	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN-RELATED	coord: 5..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G015470.1	Lsi05G015470.1	mRNA