Lsi05G013200 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G013200
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein jagunal-like protein 1-like isoform X1
Location	chr05: 20967137 .. 20969874 (-)
RNA-Seq Expression	Lsi05G013200
Synteny	Lsi05G013200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGACATCGTTGCCTGAGGAAGCCACTAAAATCGACGAACCAAATCGAACCGTCCGGTTCGTGGTGGGAAGAAGAATGCCCGTCGTGGGTCGAAGTCAGAGGTCCGGATTCTCAGATAGTTCGATCCAGTCCCCACCAAGAAGATGAATCAGAGGAAATCGGCTGCCGGAAGGCCGTCTGGAACCGATGGCTCTGATTTTTCCTATCGTATGGTCGTCGATTCTCGTAAGTTCCCTCAATTTCTTCTCCTAATTTCTTATCGATATGCATTCTATGAGCAAAAACTTCCGTCTTCTTCTTTGGAGGGGATCGTCTACCCCTAATTTTTCAGGCATTCGAACAACATTAGGAAATGGGTTTCATTTAGCTACTTTAATTGTCTTATGGGAATCAATTTCGGTTTATTCTAATTCTAGGGTATCAAAAGGTTGCCAAAGGGAAATCTCGTTTCCATACTCTGATTTTAGCCCAGGTACACACATTATATTACTTTATTCATCTCTTGTAGCGTGTTTTGTTTCATTCTAGCGATGATAATGCTTTTACGTTTACTATCTAAATAGTGATATTTCTTGTGTTTGTAATCATGGACATCATTGTAACCCACGAAAGAAGTGAAACAATTTCCATTAGATAGTAGTGTCAGTGTGATAAAGCCTCTGTTTCTTTACATGAATGAATTCCAAGGACATCCATATCAGCAATTCCTCCCACATTGTCTTCAATTTCTTGTGATATCAGTTTAATGTAGAGCTGACCTTGAGAGAGATTCATTAATTCCTGAAAAGGTTAATGTACCATATTATTTGTATTTCAGAGGCTATATCTGCTGGAAGTTTGGTGCTGATTAAGGGTACCATATGATTGTTGTATCATGAAGGTCTAAACCCGCCTTTTTGTTACCAAGAATTTGAGGGCCCACTCTCCTAGTAATGGCAAAATCTGGGTGGACAGCTTTATAAATATGTAGGGATATTAGAGTTGATTTAACGTTCGTTTTCTGTACACTAGTCTATGCGATTAATAAAGCTTTCATGTAATACTTGGTTCACTTTTTTCTTCAAGTTCTCTTGTCTTTGATTTGACTGACTGGAATGCTTTCTAGTTCCTCTATTGAAATCAATGAATATTTATCTCTACTATTTGAAATCAGGCCAAATGAAACTGGAAGAATTTGGTAGTGACATATAACATTACCTCATCTAATGATCTTACAATGTCTACATGCCTTATTGATGTTGGTTTTTACTTGTTCAATAAAATGGGAGCTTACTTGTGGACCTCTTGTGACTGTATATTGTTGTACTCTAATTTGGTCTGTTCGATTCTAATGCAGGTTTTCATTCAACTTTGTGGAGTGGTATACCTGTTTATATTGACATCAAGAAAACAGACTCCTGATAAACTTGCTATTTCATCTGCCATCACTGGTTTCTTTTCATTGTTCGTTGGAGAACTAGGTTGCTAGTGATACTATTACCTTTTGCACCAAATTTCTTATACATCTTCATCTGTTTCAACAGTAATGGTTAACTTTTTCCCAATGTTTTGTTGAAGGCCGAAGGCACAGCCGTGCAAGTTTTTTGAAAGTATATATGATTGCATCATCCCTTGCACTCCTACTGCTTTTTGTTGATGTCTCTCAGGGTAATTATACATTTGAGGTAAGAAAAGTCGATCCATTTTTTAATTTTCTGCTCAAGTAAGAGTCAAATCAAATGTAAATGTTATCAAGCAACAGGCCACTGGAATTGTTATGTATGCTAACGAGTCGACAATAAATTAAAATGTTGGACAAAAAATTAAAATAGCCATCCCATTAATAGGCATGCCTTCTTCAAGCTTGTTTAGTTATTTGAGACTCCAGAGATTTTGATTGTTAGCTTTGTTACCATTGGCATCTATCTTTGAAAATGAAGCTTTAATTTGATTTGGCTTATTGGATTTATAATTTATGGCCTTTGATCACAGCTTCCATGTGGTAATGTCTATTATTATTCATCATTCTAACTGAGTTTTGAATCTCATGAACCATTTAGGGTATTGGGGATCTAAGTAATTGGCAAACAAAGCAGCTTGAACTTTTCGAGATGATCCGCATTTCTCTTGGTGGGTTTTCTATCACATGTTACCTTCATTGTTTTTCTTACAGTAAATAAATATGAAGACTAACACTGGAATTCTCATATGTCTTCAAACAGGGGCTTTGCTTCAAATATTTTCAATCAGCACTGTGATTTCCCTCGTTGGTAACATGTCTCCTCCAAAACGTGCCTCTTAAATTATTTTGTACTACACTATTGTCCTTCTAACGACCAGGAAAGATTTCTCTACTGATTCTTCTTGATTCTGTGTCCAAAAAATCATCCAAAAGAAAGCTTGAATTTGTCTTCCTAGATCATTTTTCAAGAACTGTTTCACTTGGGGTCGGGAGCCTTATTGGGAATTTAATGAAATTTTGTATCTTGAAATTGCTCGAGTAAAATTTAAAGGTAAATCAAAATTTTCTGGGAAAAAAAAAAATTTGATGGGATTGACAATGATTGAACTCTTTGTTATATTTCTTTAAGTCCTGCTTGAATTGCTTAAAATGCGCATTTGTTGAACTAGTTATTGTGTCTAGACGAAATCTCTTCGAATCTACTTTCCCTTATTTTTTTCTCATCCTCTTTTTTAGACAATTAAGTTGGCAGTTTATGGCCACTTGTAATATATATTTTTCACATGTTCTTGCTTT

mRNA sequence

TTTGACATCGTTGCCTGAGGAAGCCACTAAAATCGACGAACCAAATCGAACCGTCCGGTTCGTGGTGGGAAGAAGAATGCCCGTCGTGGGTCGAAGTCAGAGGTCCGGATTCTCAGATAGTTCGATCCAGTCCCCACCAAGAAGATGAATCAGAGGAAATCGGCTGCCGGAAGGCCGTCTGGAACCGATGGCTCTGATTTTTCCTATCGTATGGTCGTCGATTCTCGGTATCAAAAGGTTGCCAAAGGGAAATCTCGTTTCCATACTCTGATTTTAGCCCAGGTTTTCATTCAACTTTGTGGAGTGGTATACCTGTTTATATTGACATCAAGAAAACAGACTCCTGATAAACTTGCTATTTCATCTGCCATCACTGGTTTCTTTTCATTGTTCGTTGGAGAACTAGGCCGAAGGCACAGCCGTGCAAGTTTTTTGAAAGTATATATGATTGCATCATCCCTTGCACTCCTACTGCTTTTTGTTGATGTCTCTCAGGGTAATTATACATTTGAGGGTATTGGGGATCTAAGTAATTGGCAAACAAAGCAGCTTGAACTTTTCGAGATGATCCGCATTTCTCTTGGGGCTTTGCTTCAAATATTTTCAATCAGCACTGTGATTTCCCTCGTTGGTAACATGTCTCCTCCAAAACGTGCCTCTTAAATTATTTTGTACTACACTATTGTCCTTCTAACGACCAGGAAAGATTTCTCTACTGATTCTTCTTGATTCTGTGTCCAAAAAATCATCCAAAAGAAAGCTTGAATTTGTCTTCCTAGATCATTTTTCAAGAACTGTTTCACTTGGGGTCGGGAGCCTTATTGGGAATTTAATGAAATTTTGTATCTTGAAATTGCTCGAGTAAAATTTAAAGGTAAATCAAAATTTTCTGGGAAAAAAAAAAATTTGATGGGATTGACAATGATTGAACTCTTTGTTATATTTCTTTAAGTCCTGCTTGAATTGCTTAAAATGCGCATTTGTTGAACTAGTTATTGTGTCTAGACGAAATCTCTTCGAATCTACTTTCCCTTATTTTTTTCTCATCCTCTTTTTTAGACAATTAAGTTGGCAGTTTATGGCCACTTGTAATATATATTTTTCACATGTTCTTGCTTT

Coding sequence (CDS)

ATGAATCAGAGGAAATCGGCTGCCGGAAGGCCGTCTGGAACCGATGGCTCTGATTTTTCCTATCGTATGGTCGTCGATTCTCGGTATCAAAAGGTTGCCAAAGGGAAATCTCGTTTCCATACTCTGATTTTAGCCCAGGTTTTCATTCAACTTTGTGGAGTGGTATACCTGTTTATATTGACATCAAGAAAACAGACTCCTGATAAACTTGCTATTTCATCTGCCATCACTGGTTTCTTTTCATTGTTCGTTGGAGAACTAGGCCGAAGGCACAGCCGTGCAAGTTTTTTGAAAGTATATATGATTGCATCATCCCTTGCACTCCTACTGCTTTTTGTTGATGTCTCTCAGGGTAATTATACATTTGAGGGTATTGGGGATCTAAGTAATTGGCAAACAAAGCAGCTTGAACTTTTCGAGATGATCCGCATTTCTCTTGGGGCTTTGCTTCAAATATTTTCAATCAGCACTGTGATTTCCCTCGTTGGTAACATGTCTCCTCCAAAACGTGCCTCTTAA

Protein sequence

MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVFIQLCGVVYLFILTSRKQTPDKLAISSAITGFFSLFVGELGRRHSRASFLKVYMIASSLALLLLFVDVSQGNYTFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLVGNMSPPKRAS

Homology

[Close]

BLAST of Lsi05G013200 vs. ExPASy TrEMBL
Match: A0A5D3DK80 (Protein jagunal-like protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00450 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 158/172 (91.86%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVFIQLCGVVYLFIL 60
           M+QRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQ+ IQLCGV YLFIL
Sbjct: 35  MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQIVIQLCGVAYLFIL 94

Query: 61  TSRKQTPDKLAISSAITGFFSLFVGELGRRHSRASFLKVYMIASSLALLLLFVDVSQGNY 120
           TS+K+TPDKLAISSAITGFFSLF+GELG+RHSR SFLKVY+IASSL+LLLL VDVSQGNY
Sbjct: 95  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYVIASSLSLLLLLVDVSQGNY 154

Query: 121 TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLVGNMSPPKRAS 173
           TFE IGDLSNWQTKQLELFEMIRISLGALLQIF+ISTVISLVGNMSPPKRAS
Sbjct: 155 TFESIGDLSNWQTKQLELFEMIRISLGALLQIFAISTVISLVGNMSPPKRAS 206

[Close]

BLAST of Lsi05G013200 vs. ExPASy TrEMBL
Match: A0A1S3AXI9 (uncharacterized protein LOC103483988 OS=Cucumis melo OX=3656 GN=LOC103483988 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 158/172 (91.86%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVFIQLCGVVYLFIL 60
           M+QRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQ+ IQLCGV YLFIL
Sbjct: 1   MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQIVIQLCGVAYLFIL 60

Query: 61  TSRKQTPDKLAISSAITGFFSLFVGELGRRHSRASFLKVYMIASSLALLLLFVDVSQGNY 120
           TS+K+TPDKLAISSAITGFFSLF+GELG+RHSR SFLKVY+IASSL+LLLL VDVSQGNY
Sbjct: 61  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYVIASSLSLLLLLVDVSQGNY 120

Query: 121 TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLVGNMSPPKRAS 173
           TFE IGDLSNWQTKQLELFEMIRISLGALLQIF+ISTVISLVGNMSPPKRAS
Sbjct: 121 TFESIGDLSNWQTKQLELFEMIRISLGALLQIFAISTVISLVGNMSPPKRAS 172

[Close]

BLAST of Lsi05G013200 vs. ExPASy TrEMBL
Match: A0A0A0L667 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175730 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.6e-78
Identity = 155/172 (90.12%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVFIQLCGVVYLFIL 60
           M+QRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFH+LILAQV IQLCGV YLF+L
Sbjct: 1   MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHSLILAQVVIQLCGVAYLFLL 60

Query: 61  TSRKQTPDKLAISSAITGFFSLFVGELGRRHSRASFLKVYMIASSLALLLLFVDVSQGNY 120
           TS+K+TPDKLAISSAITGFFSLF+GELG+RHSR SFLKVY IASSL+LLLL VDVSQGNY
Sbjct: 61  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYAIASSLSLLLLLVDVSQGNY 120

Query: 121 TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLVGNMSPPKRAS 173
           TFE IGDLSNWQ KQLELFEMIRISLGALLQIF+ISTVISLV NMSPPKRAS
Sbjct: 121 TFESIGDLSNWQAKQLELFEMIRISLGALLQIFAISTVISLVSNMSPPKRAS 172

[Close]

BLAST of Lsi05G013200 vs. ExPASy TrEMBL
Match: A0A6J1FTA0 (uncharacterized protein LOC111447929 OS=Cucurbita moschata OX=3662 GN=LOC111447929 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.3e-75
Identity = 149/172 (86.63%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVFIQLCGVVYLFIL 60
           MNQRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSR +TLIL QV IQLCGVVYLFIL
Sbjct: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60

Query: 61  TSRKQTPDKLAISSAITGFFSLFVGELGRRHSRASFLKVYMIASSLALLLLFVDVSQGNY 120
           TS+++TPDKLAISSA+ GFFSLF+GELGRR SRASF+K YMIASSLALLLLFV+VSQGNY
Sbjct: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120

Query: 121 TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLVGNMSPPKRAS 173
           TFEGI DLSNWQTK+LEL E IRI LGALLQIF+I TVISLVGNMSPPKR+S
Sbjct: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 172

[Close]

BLAST of Lsi05G013200 vs. ExPASy TrEMBL
Match: A0A6J1JJ87 (uncharacterized protein LOC111486305 OS=Cucurbita maxima OX=3661 GN=LOC111486305 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 149/172 (86.63%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVFIQLCGVVYLFIL 60
           MNQRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSR +TLIL QV IQLCG+VYLFIL
Sbjct: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVVIQLCGIVYLFIL 60

Query: 61  TSRKQTPDKLAISSAITGFFSLFVGELGRRHSRASFLKVYMIASSLALLLLFVDVSQGNY 120
           TS+++TPDKLAISSA+TGF SLF+GELGRR SRASFLK YMIASSLALLLLFV+VSQGNY
Sbjct: 61  TSKRETPDKLAISSAVTGFLSLFLGELGRRRSRASFLKAYMIASSLALLLLFVNVSQGNY 120

Query: 121 TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLVGNMSPPKRAS 173
           TFEGI DLSNWQTK+LEL E IRI LGALLQIF+I TVISLVGNMSPPKR+S
Sbjct: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 172

[Close]

BLAST of Lsi05G013200 vs. NCBI nr
Match: XP_038882410.1 (uncharacterized protein LOC120073675 [Benincasa hispida])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 161/172 (93.60%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVFIQLCGVVYLFIL 60
           MN RK AAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQV IQ CGVVYLFIL
Sbjct: 1   MNLRKPAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVIIQFCGVVYLFIL 60

Query: 61  TSRKQTPDKLAISSAITGFFSLFVGELGRRHSRASFLKVYMIASSLALLLLFVDVSQGNY 120
           TS+K+TPDKLAISSAITGFFSL VGELGRRHSRAS LKVYMI SSLALLLLFVDVSQGNY
Sbjct: 61  TSKKETPDKLAISSAITGFFSLLVGELGRRHSRASLLKVYMITSSLALLLLFVDVSQGNY 120

Query: 121 TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLVGNMSPPKRAS 173
           TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISL+ NMSPPKRAS
Sbjct: 121 TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLICNMSPPKRAS 172

[Close]

BLAST of Lsi05G013200 vs. NCBI nr
Match: KAA0067675.1 (protein jagunal-like protein 1-like isoform X1 [Cucumis melo var. makuwa] >TYK23679.1 protein jagunal-like protein 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 158/172 (91.86%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVFIQLCGVVYLFIL 60
           M+QRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQ+ IQLCGV YLFIL
Sbjct: 35  MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQIVIQLCGVAYLFIL 94

Query: 61  TSRKQTPDKLAISSAITGFFSLFVGELGRRHSRASFLKVYMIASSLALLLLFVDVSQGNY 120
           TS+K+TPDKLAISSAITGFFSLF+GELG+RHSR SFLKVY+IASSL+LLLL VDVSQGNY
Sbjct: 95  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYVIASSLSLLLLLVDVSQGNY 154

Query: 121 TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLVGNMSPPKRAS 173
           TFE IGDLSNWQTKQLELFEMIRISLGALLQIF+ISTVISLVGNMSPPKRAS
Sbjct: 155 TFESIGDLSNWQTKQLELFEMIRISLGALLQIFAISTVISLVGNMSPPKRAS 206

[Close]

BLAST of Lsi05G013200 vs. NCBI nr
Match: XP_008439098.1 (PREDICTED: uncharacterized protein LOC103483988 [Cucumis melo])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 158/172 (91.86%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVFIQLCGVVYLFIL 60
           M+QRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQ+ IQLCGV YLFIL
Sbjct: 1   MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQIVIQLCGVAYLFIL 60

Query: 61  TSRKQTPDKLAISSAITGFFSLFVGELGRRHSRASFLKVYMIASSLALLLLFVDVSQGNY 120
           TS+K+TPDKLAISSAITGFFSLF+GELG+RHSR SFLKVY+IASSL+LLLL VDVSQGNY
Sbjct: 61  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYVIASSLSLLLLLVDVSQGNY 120

Query: 121 TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLVGNMSPPKRAS 173
           TFE IGDLSNWQTKQLELFEMIRISLGALLQIF+ISTVISLVGNMSPPKRAS
Sbjct: 121 TFESIGDLSNWQTKQLELFEMIRISLGALLQIFAISTVISLVGNMSPPKRAS 172

[Close]

BLAST of Lsi05G013200 vs. NCBI nr
Match: XP_004148140.1 (uncharacterized protein LOC101211693 [Cucumis sativus] >KGN57273.1 hypothetical protein Csa_010144 [Cucumis sativus])

HSP 1 Score: 302.0 bits (772), Expect = 3.3e-78
Identity = 155/172 (90.12%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVFIQLCGVVYLFIL 60
           M+QRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFH+LILAQV IQLCGV YLF+L
Sbjct: 1   MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHSLILAQVVIQLCGVAYLFLL 60

Query: 61  TSRKQTPDKLAISSAITGFFSLFVGELGRRHSRASFLKVYMIASSLALLLLFVDVSQGNY 120
           TS+K+TPDKLAISSAITGFFSLF+GELG+RHSR SFLKVY IASSL+LLLL VDVSQGNY
Sbjct: 61  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYAIASSLSLLLLLVDVSQGNY 120

Query: 121 TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLVGNMSPPKRAS 173
           TFE IGDLSNWQ KQLELFEMIRISLGALLQIF+ISTVISLV NMSPPKRAS
Sbjct: 121 TFESIGDLSNWQAKQLELFEMIRISLGALLQIFAISTVISLVSNMSPPKRAS 172

[Close]

BLAST of Lsi05G013200 vs. NCBI nr
Match: XP_022943094.1 (uncharacterized protein LOC111447929 [Cucurbita moschata])

HSP 1 Score: 289.7 bits (740), Expect = 1.7e-74
Identity = 149/172 (86.63%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVFIQLCGVVYLFIL 60
           MNQRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSR +TLIL QV IQLCGVVYLFIL
Sbjct: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60

Query: 61  TSRKQTPDKLAISSAITGFFSLFVGELGRRHSRASFLKVYMIASSLALLLLFVDVSQGNY 120
           TS+++TPDKLAISSA+ GFFSLF+GELGRR SRASF+K YMIASSLALLLLFV+VSQGNY
Sbjct: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120

Query: 121 TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLVGNMSPPKRAS 173
           TFEGI DLSNWQTK+LEL E IRI LGALLQIF+I TVISLVGNMSPPKR+S
Sbjct: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 172

[Close]

BLAST of Lsi05G013200 vs. TAIR 10
Match: AT5G51510.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1352 (InterPro:IPR009787); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 2.2e-32
Identity = 79/172 (45.93%), Postives = 105/172 (61.05%), Query Frame = 0


Query: 1   MNQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQVFIQLCGVVYLFIL 60
           M QRK  AGRPSGTDGSDFSYRMVVDSRY KV K K+R   LI  Q  I + G+   F+ 
Sbjct: 1   MQQRKPTAGRPSGTDGSDFSYRMVVDSRYTKVTKEKARLRPLIFVQAAIYVIGLSCAFLT 60

Query: 61  TSRKQTPDKLAISSAITGFFSLFVGELGRRHSRASFLKVYMIASSLALLLLFVDVSQGNY 120
           T++K   + LAI++A+ G     +GELG R SR + L++Y  AS++ ++L      +   
Sbjct: 61  TTKKDEKNTLAIAAAVAGLVCSLIGELGCRRSRVNLLRLYTAASTIVMVLSVFCAVRSRL 120

Query: 121 TFEGIGDLSNWQTKQLELFEMIRISLGALLQIFSISTVISLVGNMSPPKRAS 173
           T E     S+  T +LEL   I   LGA++QI +I    SLV NMSPP +A+
Sbjct: 121 TMEERN--SSGTTAKLELAGFICAQLGAVVQILAIIVTGSLVNNMSPPTKAA 170

The following BLAST results are available for this feature:

BLAST of Lsi05G013200 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi05G013200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DK80	1.3e-80	91.86	Protein jagunal-like protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3AXI9	1.3e-80	91.86	uncharacterized protein LOC103483988 OS=Cucumis melo OX=3656 GN=LOC103483988 PE=...	[more]
A0A0A0L667	1.6e-78	90.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175730 PE=3 SV=1	[more]
A0A6J1FTA0	8.3e-75	86.63	uncharacterized protein LOC111447929 OS=Cucurbita moschata OX=3662 GN=LOC1114479...	[more]
A0A6J1JJ87	1.4e-74	86.63	uncharacterized protein LOC111486305 OS=Cucurbita maxima OX=3661 GN=LOC111486305...	[more]

BLAST of Lsi05G013200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882410.1	2.7e-80	93.60	uncharacterized protein LOC120073675 [Benincasa hispida]	[more]
KAA0067675.1	2.7e-80	91.86	protein jagunal-like protein 1-like isoform X1 [Cucumis melo var. makuwa] >TYK23...	[more]
XP_008439098.1	2.7e-80	91.86	PREDICTED: uncharacterized protein LOC103483988 [Cucumis melo]	[more]
XP_004148140.1	3.3e-78	90.12	uncharacterized protein LOC101211693 [Cucumis sativus] >KGN57273.1 hypothetical ...	[more]
XP_022943094.1	1.7e-74	86.63	uncharacterized protein LOC111447929 [Cucurbita moschata]	[more]

BLAST of Lsi05G013200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51510.1	2.2e-32	45.93	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1352...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009787	Protein jagunal	PFAM	PF07086	Jagunal	coord: 10..62 e-value: 4.3E-8 score: 33.5
IPR009787	Protein jagunal	PANTHER	PTHR20955	UNCHARACTERIZED	coord: 1..172
None	No IPR available	PANTHER	PTHR20955:SF1	PROTEIN JAGUNAL HOMOLOG 1	coord: 1..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G013200.1	Lsi05G013200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007029	endoplasmic reticulum organization
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane