Homology
BLAST of Lsi05G012730 vs. ExPASy Swiss-Prot
Match:
Q9SZK1 (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E45 PE=3 SV=1)
HSP 1 Score: 609.4 bits (1570), Expect = 4.4e-173
Identity = 297/549 (54.10%), Postives = 385/549 (70.13%), Query Frame = 0
Query: 5 KWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDYLKQD 64
K VLL+ + C SLR+F+QI QL+T L+ DD + KV+ F ++ Y+ L
Sbjct: 6 KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSI 65
Query: 65 NARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREG 124
+ L SF +N+L++ Y D P++ + Y+ V +GF PDMFTFP + KAC FSG REG
Sbjct: 66 RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125
Query: 125 RQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFMKA 184
+Q+H +V K+G D+YVQNSL+ FYG CG+ A +VF EM VRDVVSW +I+GF +
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 185 GHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKL-DLVLGNAM 244
G + EA+ F +M+VEP++AT + VL + R G L +GKGIHG+I +R L L GNA+
Sbjct: 186 GLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 245 LDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRT-LGISPD 304
+DMY K L +A ++F EL +D VSW MI+GL+ + KE+++LFS+M+T GI PD
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 305 AIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFY 364
ILTSVLSACASLG +D G WVHEYI GIKWD HIGTAIVDMYAKCG IE AL+IF
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 365 NMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDE 424
+ +N FTWNALL GLA+HG E+L FE M+ G KPN VTFLA + ACCH+G+VDE
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 425 GRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNA 484
GR+YF+ M + YNL PKLEHYGCMIDL CRAGLL+EA+EL + MP+KPDV I G +L+A
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 485 CRTVGN-VELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNKA 544
C+ G +EL I D L+++ EDSGV+VLLSNI A N RW DV R+RRLMK +G++K
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545
Query: 545 PGSSVIEVY 551
PGSS IE +
Sbjct: 546 PGSSYIEKF 554
BLAST of Lsi05G012730 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 444.9 bits (1143), Expect = 1.4e-123
Identity = 238/609 (39.08%), Postives = 358/609 (58.78%), Query Frame = 0
Query: 8 LLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFA-NFVEYGDYACDYLKQ-DN 67
LL ++ CK L +QI AQ++ +GL+ D F +++++ F A + Y DY+ LK +N
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115
Query: 68 ARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFV---PDMFTFPVLLKACSNFSGSR 127
+ F +N I + + P+ + +Y++M+R G PD FT+PVL K C++ S
Sbjct: 116 PNI--FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 175
Query: 128 EGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFM 187
G + V+KL L +V N+ I + +CGD A +VFDE VRD+VSWN LI+G+
Sbjct: 176 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 235
Query: 188 KAGHFDEAISLFFRM---NVEPSIATLINVLTACARKGDLCMGKGIHGVI-ERRFKLDLV 247
K G ++AI ++ M V+P T+I ++++C+ GDL GK + + E ++ +
Sbjct: 236 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 295
Query: 248 LGNAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGL-------------------- 307
L NA++DM++K G ++EA++IFD L R IVSWT MI+G
Sbjct: 296 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 355
Query: 308 -----------MQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHE 367
+Q+ +++L LF M+T PD I + LSAC+ LG LD G W+H
Sbjct: 356 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 415
Query: 368 YINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHE 427
YI + + ++ +GT++VDMYAKCG I AL +F+ + RN+ T+ A++ GLA+HG A
Sbjct: 416 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 475
Query: 428 ALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCM 487
A++ F MI +G+ P+E+TF+ +++ACCH GM+ GR YF+ M + +NL P+L+HY M
Sbjct: 476 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR-FNLNPQLKHYSIM 535
Query: 488 IDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDS 547
+DL RAGLLEEA L +MPM+ D +WG LL CR GNVEL +LELDP DS
Sbjct: 536 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 595
Query: 548 GVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTE 577
G++VLL + W D R RR+M +RGV K PG S IEV G EF+V D S ++E
Sbjct: 596 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 655
BLAST of Lsi05G012730 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 429.5 bits (1103), Expect = 6.2e-119
Identity = 227/607 (37.40%), Postives = 360/607 (59.31%), Query Frame = 0
Query: 9 LDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEF--FANFVEYGDYACDYLK---Q 68
L + NCK+L+ R IHAQ++ GL ++ +K++EF + E YA K +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 69 DNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSRE 128
N + +N++ + P A+ +Y M+ G +P+ +TFP +LK+C+ +E
Sbjct: 97 PNLLI----WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE 156
Query: 129 GRQVHSVVVKLGLLADLYVQNS-------------------------------LIRFYGA 188
G+Q+H V+KLG DLYV S LI+ Y +
Sbjct: 157 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 216
Query: 189 CGDFSCAGRVFDEMLVRDVVSWNSLISGFMKAGHFDEAISLF---FRMNVEPSIATLINV 248
G A ++FDE+ V+DVVSWN++ISG+ + G++ EA+ LF + NV P +T++ V
Sbjct: 217 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 276
Query: 249 LTACARKGDLCMGKGIH-GVIERRFKLDLVLGNAMLDMYAKNGCLYEAKKIFDELPTRDI 308
++ACA+ G + +G+ +H + + F +L + NA++D+Y+K G L A +F+ LP +D+
Sbjct: 277 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 336
Query: 309 VSWTIMITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEY 368
+SW +I G + KE+L LF M G +P+ + + S+L ACA LG +D G W+H Y
Sbjct: 337 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 396
Query: 369 INQR--GIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAH 428
I++R G+ + T+++DMYAKCG IE A Q+F ++ ++ +WNA++ G AMHG A
Sbjct: 397 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 456
Query: 429 EALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGC 488
+ +LF M G++P+++TF+ +++AC HSGM+D GR F M+ Q Y + PKLEHYGC
Sbjct: 457 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT-QDYKMTPKLEHYGC 516
Query: 489 MIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPED 548
MIDL +GL +EA E+ M M+PD +IW LL AC+ GNVEL + +++++PE+
Sbjct: 517 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 576
Query: 549 SGVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQT 574
G +VLLSNI A+ RW++V + R L+ D+G+ K PG S IE+ HEF++GD H +
Sbjct: 577 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 636
BLAST of Lsi05G012730 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 422.5 bits (1085), Expect = 7.6e-117
Identity = 228/611 (37.32%), Postives = 345/611 (56.46%), Query Frame = 0
Query: 8 LLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYG-----DYACDYLK 67
+L+ + CKSL +Q+HA ++ + + K+ F N YA +
Sbjct: 15 ILEKLSFCKSLNHIKQLHAHILRT------VINHKLNSFLFNLSVSSSSINLSYALNVFS 74
Query: 68 QDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSR 127
+ S FN + P+ + Y+R+ G D F+F +LKA S S
Sbjct: 75 SIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALF 134
Query: 128 EGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFM 187
EG ++H V K+ L D +V+ + Y +CG + A VFDEM RDVV+WN++I +
Sbjct: 135 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 194
Query: 188 KAGHFDEAISLFFRM---NVEPSIATLINVLTACARKGDLCMGKGIHG-VIERRFKLDLV 247
+ G DEA LF M NV P L N+++AC R G++ + I+ +IE ++D
Sbjct: 195 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 254
Query: 248 LGNAMLDMYAKNGC-------------------------------LYEAKKIFDELPTRD 307
L A++ MYA GC L +A+ IFD+ +D
Sbjct: 255 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 314
Query: 308 IVSWTIMITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHE 367
+V WT MI+ ++SD P+E+L +F M GI PD + + SV+SACA+LG LD WVH
Sbjct: 315 LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHS 374
Query: 368 YINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHE 427
I+ G++ ++ I A+++MYAKCG ++ +F MP+RN +W++++ L+MHG A +
Sbjct: 375 CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASD 434
Query: 428 ALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCM 487
AL+LF M V+PNEVTF+ ++ C HSG+V+EG+K F +M+ + YN+ PKLEHYGCM
Sbjct: 435 ALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDE-YNITPKLEHYGCM 494
Query: 488 IDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDS 547
+DLF RA LL EA+E+ +MP+ +V+IWG L++ACR G +EL ILEL+P+
Sbjct: 495 VDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 554
Query: 548 GVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTE 579
G VL+SNI A +RW DV +RR+M+++ V K G S I+ GK+HEF++GD H Q+
Sbjct: 555 GALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSN 614
BLAST of Lsi05G012730 vs. ExPASy Swiss-Prot
Match:
Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)
HSP 1 Score: 416.8 bits (1070), Expect = 4.2e-115
Identity = 226/599 (37.73%), Postives = 344/599 (57.43%), Query Frame = 0
Query: 15 CKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFAN----FVEYGDYACDYLKQDNARLGS 74
CK+ F+Q+H+Q +T G+ + K+ F+ + V Y + + + +
Sbjct: 44 CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVV-- 103
Query: 75 FPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSRE-GRQVHS 134
+N++I + D V +Y M+++G PD TFP LL G+ G+++H
Sbjct: 104 --WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 163
Query: 135 VVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFMKAGHFDE 194
VVK GL ++LYVQN+L++ Y CG A VFD DV SWN +ISG+ + ++E
Sbjct: 164 HVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEE 223
Query: 195 AISLFFRMN---VEPSIATLINVLTACARKGDLCMGKGIHG-VIERRFKLDLVLGNAMLD 254
+I L M V P+ TL+ VL+AC++ D + K +H V E + + L L NA+++
Sbjct: 224 SIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVN 283
Query: 255 MYA-------------------------------KNGCLYEAKKIFDELPTRDIVSWTIM 314
YA + G L A+ FD++P RD +SWTIM
Sbjct: 284 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 343
Query: 315 ITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGI 374
I G +++ ESLE+F M++ G+ PD + SVL+ACA LG+L+ G W+ YI++ I
Sbjct: 344 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKI 403
Query: 375 KWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEV 434
K D+ +G A++DMY KCGC E A ++F++M QR+ FTW A++ GLA +G EA+ +F
Sbjct: 404 KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQ 463
Query: 435 MIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRA 494
M ++P+++T+L +++AC HSGMVD+ RK+F M + + P L HYGCM+D+ RA
Sbjct: 464 MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD-HRIEPSLVHYGCMVDMLGRA 523
Query: 495 GLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDSGVFVLLS 554
GL++EA E+ R MPM P+ ++WG LL A R + ++ ILEL+P++ V+ LL
Sbjct: 524 GLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLC 583
Query: 555 NISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTEEIFQVL 574
NI A +RW D+ +RR + D + K PG S+IEV G AHEFV GD SHLQ+EEI+ L
Sbjct: 584 NIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 637
BLAST of Lsi05G012730 vs. ExPASy TrEMBL
Match:
A0A0A0LF19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004700 PE=4 SV=1)
HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 525/582 (90.21%), Postives = 557/582 (95.70%), Query Frame = 0
Query: 1 MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1 MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
Query: 61 LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
L+Q N RLGSFPFNSLIN YVGG+ PQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61 LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
SREGRQVH VVVKLGLLAD YVQNSLIR YGACGDFSCAG+VFDEMLVRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180
Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
FMKAGHFDEAIS+FFRM+VEPS+ TL++VL ACAR GDLC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
NAMLDMY KNGC YEAK IFDELPTRDIVSWTIMITGL+QSD+PK+SLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGIS 300
Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMAL+I
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
FY+M QRNTFTWNALLCGLAMHGL HEALNLFEVMIISGVKPNE+TFLAI+TACCH G+V
Sbjct: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLV 420
Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
DEGRKYF+NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWG+LL
Sbjct: 421 DEGRKYFDNMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLL 480
Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
NAC TVGN+ELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRK 540
Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
APGSSVIEV GKAHEFVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581
BLAST of Lsi05G012730 vs. ExPASy TrEMBL
Match:
A0A5D3CGR6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00240 PE=4 SV=1)
HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 525/582 (90.21%), Postives = 558/582 (95.88%), Query Frame = 0
Query: 1 MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1 MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
Query: 61 LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
L+Q N RLGSFPFNSLIN YVGG+ PQ AVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61 LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
SREGRQVH VVVKLGLLADLYVQNSLIR YGACGD SCAG+VFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180
Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
FMKAGHFDEAIS+FFRM+VEPSIATL++VL ACAR G+LC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240
Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
NAMLDMY KNGC YEAKK+FDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360
Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
FY+MPQRNTFTWNALLCGLAMHGL HEAL+LFEVM ISGV+PNE+TFLAI+TACCHSG+V
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420
Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
DEGRKYF+NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLL
Sbjct: 421 DEGRKYFDNMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLL 480
Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
NAC TVGNVELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKK 540
Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
APGSSVIEV GKAHEFVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581
BLAST of Lsi05G012730 vs. ExPASy TrEMBL
Match:
A0A1S3C7P6 (pentatricopeptide repeat-containing protein At4g38010 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497763 PE=4 SV=1)
HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 525/582 (90.21%), Postives = 557/582 (95.70%), Query Frame = 0
Query: 1 MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1 MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
Query: 61 LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
L+Q N RLGSFPFNSLIN YVGG+ PQ AVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61 LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
SREGRQVH VVVKLGLLADLYVQNSLIR YGACGD SCAG+VFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180
Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
FMKAGHFDEAIS+FFRM+VEPSIATL++VL ACAR G+LC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240
Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
NAMLDMY KNGC YEAKK+FDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360
Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
FY+MPQRNTFTWNALLCGLAMHGL HEAL+LFEVM ISGV+PNE+TFLAI+TACCHSG+V
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420
Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
DEGRKYF NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLL
Sbjct: 421 DEGRKYFENMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLL 480
Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
NAC TVGNVELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKK 540
Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
APGSSVIEV GKAHEFVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581
BLAST of Lsi05G012730 vs. ExPASy TrEMBL
Match:
A0A5A7V3V4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001190 PE=4 SV=1)
HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 523/582 (89.86%), Postives = 558/582 (95.88%), Query Frame = 0
Query: 1 MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1 MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
Query: 61 LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
L+Q N RLGSFPFNSLIN YVGG+ PQ AVSV+RRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61 LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVFRRMVRDGFVPDMFTFPVLLKACSNFSG 120
Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
SREGRQVH VVVKLGLLADLYVQNSLIR YGACGD SCAG+VFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180
Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
FMKAGHFDEAIS+FFRM+VEPSIATL++VL ACAR G+LC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240
Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
NAMLDMY KNGC YEAKK+FDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360
Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
FY+MPQRNTFTWNALLCGLAMHGL HEAL+LFEVM ISGV+PNE+TFLAI+TACCHSG+V
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420
Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
DEGRKYF+NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLL
Sbjct: 421 DEGRKYFDNMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLL 480
Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
NAC TVGNVELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKK 540
Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
APGSSVIEV GKAH+FVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHDFVVGDISHLQTEEIYKVLNLINSVYHE 581
BLAST of Lsi05G012730 vs. ExPASy TrEMBL
Match:
A0A6J1HYD9 (pentatricopeptide repeat-containing protein At4g38010 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467390 PE=4 SV=1)
HSP 1 Score: 1067.8 bits (2760), Expect = 1.7e-308
Identity = 513/588 (87.24%), Postives = 553/588 (94.05%), Query Frame = 0
Query: 1 MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
MFNLKWVLLDS+K+CK+LRIF++IHAQLVTSGLVYDDFVT KV+EFFANFVE+GDYACDY
Sbjct: 1 MFNLKWVLLDSIKDCKNLRIFKKIHAQLVTSGLVYDDFVTNKVVEFFANFVEFGDYACDY 60
Query: 61 LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
LKQ N RLGSFPFNSLIN Y GG+ PQMAVSVYRRM RDGFVPD+FTFPVL KACSNFSG
Sbjct: 61 LKQVNTRLGSFPFNSLINGYAGGEFPQMAVSVYRRMARDGFVPDLFTFPVLFKACSNFSG 120
Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
SREGRQVH VV+KLG+L+DL+VQNSL+R YGAC DFSCAG+VFDEMLVRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVIKLGILSDLFVQNSLVRCYGACEDFSCAGKVFDEMLVRDVVSWNSLISG 180
Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
FMKAG FD+AISLFFRM+VEPS+ATL++VL ACARKGDL MGKGIHG+I+RRFKLDLVLG
Sbjct: 181 FMKAGRFDDAISLFFRMDVEPSVATLVSVLAACARKGDLYMGKGIHGMIQRRFKLDLVLG 240
Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
NAMLDMYAKNGCLYEAK IFDELPTRDIVSWTIMITGL+QS++PKESLELF MMR LGIS
Sbjct: 241 NAMLDMYAKNGCLYEAKNIFDELPTRDIVSWTIMITGLVQSNHPKESLELFWMMRNLGIS 300
Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
PD IILTSVLSACASLGTL +GTWVHEYINQRGIKWDIHIGTAIVDMYAKCGC+EMA QI
Sbjct: 301 PDGIILTSVLSACASLGTLKYGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCVEMARQI 360
Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
F +MPQRNTFTWNALLCGLAMHGLAHEAL LFEVMIISGVK NEVTFLAI+TACCHSG+V
Sbjct: 361 FNSMPQRNTFTWNALLCGLAMHGLAHEALYLFEVMIISGVKTNEVTFLAILTACCHSGLV 420
Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
DEGRKYF+NMS Q YNL PKLEHYGCMIDLFCRAGLLEEAVEL RTMPMKPDVLIWGVLL
Sbjct: 421 DEGRKYFDNMSSQRYNLSPKLEHYGCMIDLFCRAGLLEEAVELVRTMPMKPDVLIWGVLL 480
Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
NAC+TVGNVELS HIQ+YILELDPEDSGVFVLLSNISATNERWS+V RLRRLMKDRGV K
Sbjct: 481 NACKTVGNVELSQHIQEYILELDPEDSGVFVLLSNISATNERWSNVTRLRRLMKDRGVKK 540
Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNECQLMHP 589
+PGSSVIEV GKAHEFV GDIS+LQTEEI++VL LINSV++E LMHP
Sbjct: 541 SPGSSVIEVDGKAHEFVAGDISNLQTEEIYKVLTLINSVFHESHLMHP 588
BLAST of Lsi05G012730 vs. NCBI nr
Match:
XP_038889932.1 (pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889934.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889935.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889936.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889937.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889938.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889939.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889940.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889941.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida])
HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 528/582 (90.72%), Postives = 562/582 (96.56%), Query Frame = 0
Query: 1 MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
MFNLKWVLL SV++CK+LRIFRQIHAQLVTSGLV DDFVT+KV+EFFANFVEYGDYACDY
Sbjct: 1 MFNLKWVLLHSVEDCKNLRIFRQIHAQLVTSGLVCDDFVTSKVIEFFANFVEYGDYACDY 60
Query: 61 LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
LKQ + RLGSFPFNSLIN YV G+LPQ+AVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61 LKQGSTRLGSFPFNSLINGYV-GELPQLAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
SREGRQ+H VVVKLGLLAD YVQNSLI YGACGDFSCAGRVFDEMLVRDVVSWNSLISG
Sbjct: 121 SREGRQIHGVVVKLGLLADHYVQNSLICCYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
FMK GHFDEAISLFFRM+VEPSIATL++VL ACARKGDLCMGKGIHGVIERRFKL+L+LG
Sbjct: 181 FMKVGHFDEAISLFFRMDVEPSIATLVSVLAACARKGDLCMGKGIHGVIERRFKLNLILG 240
Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
NAMLDMY KNGCLYEAKKIFDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGI+
Sbjct: 241 NAMLDMYVKNGCLYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIN 300
Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
PDAIILTSVLSAC+SLGTLDFGTWVHEYINQR IKWD+HIGTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACSSLGTLDFGTWVHEYINQRRIKWDVHIGTAIVDMYAKCGCIEMALQI 360
Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
FYNMP++NTFTWNALLCGLAMHGL +EALNLFEVMI SGVKPNEVTFLAI+TACCHSG+V
Sbjct: 361 FYNMPKKNTFTWNALLCGLAMHGLVYEALNLFEVMIKSGVKPNEVTFLAILTACCHSGLV 420
Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
+EGRKYFNNMS QLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL
Sbjct: 421 NEGRKYFNNMSSQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
NAC+TVGNV+LSHHI+DYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGV K
Sbjct: 481 NACKTVGNVDLSHHIRDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVEK 540
Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
APGSSVIEV GKAHEFV GDISHLQT+EI+++L+LINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVAGDISHLQTKEIYKLLSLINSVYHE 581
BLAST of Lsi05G012730 vs. NCBI nr
Match:
XP_031736963.1 (pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cucumis sativus])
HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 525/582 (90.21%), Postives = 557/582 (95.70%), Query Frame = 0
Query: 1 MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1 MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
Query: 61 LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
L+Q N RLGSFPFNSLIN YVGG+ PQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61 LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
SREGRQVH VVVKLGLLAD YVQNSLIR YGACGDFSCAG+VFDEMLVRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180
Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
FMKAGHFDEAIS+FFRM+VEPS+ TL++VL ACAR GDLC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240
Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
NAMLDMY KNGC YEAK IFDELPTRDIVSWTIMITGL+QSD+PK+SLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGIS 300
Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMAL+I
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360
Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
FY+M QRNTFTWNALLCGLAMHGL HEALNLFEVMIISGVKPNE+TFLAI+TACCH G+V
Sbjct: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLV 420
Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
DEGRKYF+NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWG+LL
Sbjct: 421 DEGRKYFDNMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLL 480
Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
NAC TVGN+ELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRK 540
Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
APGSSVIEV GKAHEFVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581
BLAST of Lsi05G012730 vs. NCBI nr
Match:
TYK10715.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 525/582 (90.21%), Postives = 558/582 (95.88%), Query Frame = 0
Query: 1 MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1 MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
Query: 61 LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
L+Q N RLGSFPFNSLIN YVGG+ PQ AVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61 LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
SREGRQVH VVVKLGLLADLYVQNSLIR YGACGD SCAG+VFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180
Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
FMKAGHFDEAIS+FFRM+VEPSIATL++VL ACAR G+LC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240
Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
NAMLDMY KNGC YEAKK+FDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360
Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
FY+MPQRNTFTWNALLCGLAMHGL HEAL+LFEVM ISGV+PNE+TFLAI+TACCHSG+V
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420
Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
DEGRKYF+NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLL
Sbjct: 421 DEGRKYFDNMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLL 480
Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
NAC TVGNVELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKK 540
Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
APGSSVIEV GKAHEFVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581
BLAST of Lsi05G012730 vs. NCBI nr
Match:
XP_008458315.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cucumis melo])
HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 525/582 (90.21%), Postives = 557/582 (95.70%), Query Frame = 0
Query: 1 MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1 MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
Query: 61 LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
L+Q N RLGSFPFNSLIN YVGG+ PQ AVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61 LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
SREGRQVH VVVKLGLLADLYVQNSLIR YGACGD SCAG+VFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180
Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
FMKAGHFDEAIS+FFRM+VEPSIATL++VL ACAR G+LC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240
Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
NAMLDMY KNGC YEAKK+FDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360
Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
FY+MPQRNTFTWNALLCGLAMHGL HEAL+LFEVM ISGV+PNE+TFLAI+TACCHSG+V
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420
Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
DEGRKYF NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLL
Sbjct: 421 DEGRKYFENMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLL 480
Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
NAC TVGNVELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKK 540
Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
APGSSVIEV GKAHEFVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581
BLAST of Lsi05G012730 vs. NCBI nr
Match:
KAA0061557.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 523/582 (89.86%), Postives = 558/582 (95.88%), Query Frame = 0
Query: 1 MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1 MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60
Query: 61 LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
L+Q N RLGSFPFNSLIN YVGG+ PQ AVSV+RRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61 LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVFRRMVRDGFVPDMFTFPVLLKACSNFSG 120
Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
SREGRQVH VVVKLGLLADLYVQNSLIR YGACGD SCAG+VFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180
Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
FMKAGHFDEAIS+FFRM+VEPSIATL++VL ACAR G+LC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240
Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
NAMLDMY KNGC YEAKK+FDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300
Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360
Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
FY+MPQRNTFTWNALLCGLAMHGL HEAL+LFEVM ISGV+PNE+TFLAI+TACCHSG+V
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420
Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
DEGRKYF+NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLL
Sbjct: 421 DEGRKYFDNMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLL 480
Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
NAC TVGNVELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKK 540
Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
APGSSVIEV GKAH+FVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHDFVVGDISHLQTEEIYKVLNLINSVYHE 581
BLAST of Lsi05G012730 vs. TAIR 10
Match:
AT4G38010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 609.4 bits (1570), Expect = 3.1e-174
Identity = 297/549 (54.10%), Postives = 385/549 (70.13%), Query Frame = 0
Query: 5 KWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDYLKQD 64
K VLL+ + C SLR+F+QI QL+T L+ DD + KV+ F ++ Y+ L
Sbjct: 6 KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSI 65
Query: 65 NARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREG 124
+ L SF +N+L++ Y D P++ + Y+ V +GF PDMFTFP + KAC FSG REG
Sbjct: 66 RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125
Query: 125 RQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFMKA 184
+Q+H +V K+G D+YVQNSL+ FYG CG+ A +VF EM VRDVVSW +I+GF +
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 185 GHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKL-DLVLGNAM 244
G + EA+ F +M+VEP++AT + VL + R G L +GKGIHG+I +R L L GNA+
Sbjct: 186 GLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 245 LDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRT-LGISPD 304
+DMY K L +A ++F EL +D VSW MI+GL+ + KE+++LFS+M+T GI PD
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 305 AIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFY 364
ILTSVLSACASLG +D G WVHEYI GIKWD HIGTAIVDMYAKCG IE AL+IF
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 365 NMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDE 424
+ +N FTWNALL GLA+HG E+L FE M+ G KPN VTFLA + ACCH+G+VDE
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 425 GRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNA 484
GR+YF+ M + YNL PKLEHYGCMIDL CRAGLL+EA+EL + MP+KPDV I G +L+A
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 485 CRTVGN-VELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNKA 544
C+ G +EL I D L+++ EDSGV+VLLSNI A N RW DV R+RRLMK +G++K
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545
Query: 545 PGSSVIEVY 551
PGSS IE +
Sbjct: 546 PGSSYIEKF 554
BLAST of Lsi05G012730 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 444.9 bits (1143), Expect = 1.0e-124
Identity = 238/609 (39.08%), Postives = 358/609 (58.78%), Query Frame = 0
Query: 8 LLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFA-NFVEYGDYACDYLKQ-DN 67
LL ++ CK L +QI AQ++ +GL+ D F +++++ F A + Y DY+ LK +N
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115
Query: 68 ARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFV---PDMFTFPVLLKACSNFSGSR 127
+ F +N I + + P+ + +Y++M+R G PD FT+PVL K C++ S
Sbjct: 116 PNI--FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 175
Query: 128 EGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFM 187
G + V+KL L +V N+ I + +CGD A +VFDE VRD+VSWN LI+G+
Sbjct: 176 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 235
Query: 188 KAGHFDEAISLFFRM---NVEPSIATLINVLTACARKGDLCMGKGIHGVI-ERRFKLDLV 247
K G ++AI ++ M V+P T+I ++++C+ GDL GK + + E ++ +
Sbjct: 236 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 295
Query: 248 LGNAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGL-------------------- 307
L NA++DM++K G ++EA++IFD L R IVSWT MI+G
Sbjct: 296 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 355
Query: 308 -----------MQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHE 367
+Q+ +++L LF M+T PD I + LSAC+ LG LD G W+H
Sbjct: 356 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 415
Query: 368 YINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHE 427
YI + + ++ +GT++VDMYAKCG I AL +F+ + RN+ T+ A++ GLA+HG A
Sbjct: 416 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 475
Query: 428 ALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCM 487
A++ F MI +G+ P+E+TF+ +++ACCH GM+ GR YF+ M + +NL P+L+HY M
Sbjct: 476 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR-FNLNPQLKHYSIM 535
Query: 488 IDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDS 547
+DL RAGLLEEA L +MPM+ D +WG LL CR GNVEL +LELDP DS
Sbjct: 536 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 595
Query: 548 GVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTE 577
G++VLL + W D R RR+M +RGV K PG S IEV G EF+V D S ++E
Sbjct: 596 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 655
BLAST of Lsi05G012730 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 429.5 bits (1103), Expect = 4.4e-120
Identity = 227/607 (37.40%), Postives = 360/607 (59.31%), Query Frame = 0
Query: 9 LDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEF--FANFVEYGDYACDYLK---Q 68
L + NCK+L+ R IHAQ++ GL ++ +K++EF + E YA K +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 69 DNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSRE 128
N + +N++ + P A+ +Y M+ G +P+ +TFP +LK+C+ +E
Sbjct: 97 PNLLI----WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE 156
Query: 129 GRQVHSVVVKLGLLADLYVQNS-------------------------------LIRFYGA 188
G+Q+H V+KLG DLYV S LI+ Y +
Sbjct: 157 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 216
Query: 189 CGDFSCAGRVFDEMLVRDVVSWNSLISGFMKAGHFDEAISLF---FRMNVEPSIATLINV 248
G A ++FDE+ V+DVVSWN++ISG+ + G++ EA+ LF + NV P +T++ V
Sbjct: 217 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 276
Query: 249 LTACARKGDLCMGKGIH-GVIERRFKLDLVLGNAMLDMYAKNGCLYEAKKIFDELPTRDI 308
++ACA+ G + +G+ +H + + F +L + NA++D+Y+K G L A +F+ LP +D+
Sbjct: 277 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 336
Query: 309 VSWTIMITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEY 368
+SW +I G + KE+L LF M G +P+ + + S+L ACA LG +D G W+H Y
Sbjct: 337 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 396
Query: 369 INQR--GIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAH 428
I++R G+ + T+++DMYAKCG IE A Q+F ++ ++ +WNA++ G AMHG A
Sbjct: 397 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 456
Query: 429 EALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGC 488
+ +LF M G++P+++TF+ +++AC HSGM+D GR F M+ Q Y + PKLEHYGC
Sbjct: 457 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT-QDYKMTPKLEHYGC 516
Query: 489 MIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPED 548
MIDL +GL +EA E+ M M+PD +IW LL AC+ GNVEL + +++++PE+
Sbjct: 517 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 576
Query: 549 SGVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQT 574
G +VLLSNI A+ RW++V + R L+ D+G+ K PG S IE+ HEF++GD H +
Sbjct: 577 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 636
BLAST of Lsi05G012730 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 422.5 bits (1085), Expect = 5.4e-118
Identity = 228/611 (37.32%), Postives = 345/611 (56.46%), Query Frame = 0
Query: 8 LLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYG-----DYACDYLK 67
+L+ + CKSL +Q+HA ++ + + K+ F N YA +
Sbjct: 15 ILEKLSFCKSLNHIKQLHAHILRT------VINHKLNSFLFNLSVSSSSINLSYALNVFS 74
Query: 68 QDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSR 127
+ S FN + P+ + Y+R+ G D F+F +LKA S S
Sbjct: 75 SIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALF 134
Query: 128 EGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFM 187
EG ++H V K+ L D +V+ + Y +CG + A VFDEM RDVV+WN++I +
Sbjct: 135 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 194
Query: 188 KAGHFDEAISLFFRM---NVEPSIATLINVLTACARKGDLCMGKGIHG-VIERRFKLDLV 247
+ G DEA LF M NV P L N+++AC R G++ + I+ +IE ++D
Sbjct: 195 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 254
Query: 248 LGNAMLDMYAKNGC-------------------------------LYEAKKIFDELPTRD 307
L A++ MYA GC L +A+ IFD+ +D
Sbjct: 255 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 314
Query: 308 IVSWTIMITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHE 367
+V WT MI+ ++SD P+E+L +F M GI PD + + SV+SACA+LG LD WVH
Sbjct: 315 LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHS 374
Query: 368 YINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHE 427
I+ G++ ++ I A+++MYAKCG ++ +F MP+RN +W++++ L+MHG A +
Sbjct: 375 CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASD 434
Query: 428 ALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCM 487
AL+LF M V+PNEVTF+ ++ C HSG+V+EG+K F +M+ + YN+ PKLEHYGCM
Sbjct: 435 ALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDE-YNITPKLEHYGCM 494
Query: 488 IDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDS 547
+DLF RA LL EA+E+ +MP+ +V+IWG L++ACR G +EL ILEL+P+
Sbjct: 495 VDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 554
Query: 548 GVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTE 579
G VL+SNI A +RW DV +RR+M+++ V K G S I+ GK+HEF++GD H Q+
Sbjct: 555 GALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSN 614
BLAST of Lsi05G012730 vs. TAIR 10
Match:
AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 416.8 bits (1070), Expect = 3.0e-116
Identity = 226/599 (37.73%), Postives = 344/599 (57.43%), Query Frame = 0
Query: 15 CKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFAN----FVEYGDYACDYLKQDNARLGS 74
CK+ F+Q+H+Q +T G+ + K+ F+ + V Y + + + +
Sbjct: 44 CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVV-- 103
Query: 75 FPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSRE-GRQVHS 134
+N++I + D V +Y M+++G PD TFP LL G+ G+++H
Sbjct: 104 --WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 163
Query: 135 VVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFMKAGHFDE 194
VVK GL ++LYVQN+L++ Y CG A VFD DV SWN +ISG+ + ++E
Sbjct: 164 HVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEE 223
Query: 195 AISLFFRMN---VEPSIATLINVLTACARKGDLCMGKGIHG-VIERRFKLDLVLGNAMLD 254
+I L M V P+ TL+ VL+AC++ D + K +H V E + + L L NA+++
Sbjct: 224 SIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVN 283
Query: 255 MYA-------------------------------KNGCLYEAKKIFDELPTRDIVSWTIM 314
YA + G L A+ FD++P RD +SWTIM
Sbjct: 284 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 343
Query: 315 ITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGI 374
I G +++ ESLE+F M++ G+ PD + SVL+ACA LG+L+ G W+ YI++ I
Sbjct: 344 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKI 403
Query: 375 KWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEV 434
K D+ +G A++DMY KCGC E A ++F++M QR+ FTW A++ GLA +G EA+ +F
Sbjct: 404 KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQ 463
Query: 435 MIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRA 494
M ++P+++T+L +++AC HSGMVD+ RK+F M + + P L HYGCM+D+ RA
Sbjct: 464 MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD-HRIEPSLVHYGCMVDMLGRA 523
Query: 495 GLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDSGVFVLLS 554
GL++EA E+ R MPM P+ ++WG LL A R + ++ ILEL+P++ V+ LL
Sbjct: 524 GLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLC 583
Query: 555 NISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTEEIFQVL 574
NI A +RW D+ +RR + D + K PG S+IEV G AHEFV GD SHLQ+EEI+ L
Sbjct: 584 NIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 637
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SZK1 | 4.4e-173 | 54.10 | Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX... | [more] |
Q9SJZ3 | 1.4e-123 | 39.08 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
Q9LN01 | 6.2e-119 | 37.40 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O23337 | 7.6e-117 | 37.32 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
Q9LSB8 | 4.2e-115 | 37.73 | Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LF19 | 0.0e+00 | 90.21 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004700 PE=4 SV=1 | [more] |
A0A5D3CGR6 | 0.0e+00 | 90.21 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3C7P6 | 0.0e+00 | 90.21 | pentatricopeptide repeat-containing protein At4g38010 isoform X1 OS=Cucumis melo... | [more] |
A0A5A7V3V4 | 0.0e+00 | 89.86 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1HYD9 | 1.7e-308 | 87.24 | pentatricopeptide repeat-containing protein At4g38010 isoform X1 OS=Cucurbita ma... | [more] |
Match Name | E-value | Identity | Description | |
XP_038889932.1 | 0.0e+00 | 90.72 | pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_03... | [more] |
XP_031736963.1 | 0.0e+00 | 90.21 | pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cucumis sativu... | [more] |
TYK10715.1 | 0.0e+00 | 90.21 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_008458315.1 | 0.0e+00 | 90.21 | PREDICTED: pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cuc... | [more] |
KAA0061557.1 | 0.0e+00 | 89.86 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |