Lsi05G012730 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G012730
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr05: 20467056 .. 20468825 (-)
RNA-Seq ExpressionLsi05G012730
SyntenyLsi05G012730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAATCTAAAATGGGTTCTATTAGATTCAGTTAAAAATTGTAAGAGCTTAAGGATCTTTAGACAAATTCATGCTCAGTTGGTAACATCAGGGTTAGTTTACGATGACTTTGTCACAACCAAAGTGATGGAATTCTTTGCCAATTTTGTTGAGTATGGTGACTATGCCTGTGATTATTTAAAACAAGACAACGCTCGCTTAGGTTCATTTCCATTCAACTCACTGATTAATGTGTATGTTGGTGGTGACTTGCCACAAATGGCGGTTTCAGTTTATAGAAGGATGGTGAGAGATGGGTTTGTGCCTGATATGTTTACTTTTCCAGTCCTTCTGAAAGCATGCTCTAACTTTTCAGGGAGCAGAGAAGGCAGACAGGTTCATAGCGTGGTGGTTAAGTTGGGGCTTTTGGCTGATCTTTATGTACAAAACTCACTGATTCGTTTCTATGGAGCTTGTGGGGATTTTTCTTGTGCAGGCAGGGTGTTTGATGAAATGCTTGTTCGAGATGTTGTTTCGTGGAACAGTTTGATATCTGGGTTCATGAAGGCGGGGCATTTTGATGAGGCTATTTCTTTGTTTTTTAGAATGAATGTGGAGCCAAGCATTGCAACTTTAATCAATGTGCTTACTGCTTGTGCAAGAAAGGGTGACTTGTGTATGGGGAAGGGAATTCATGGTGTGATCGAGCGAAGGTTTAAGTTGGATTTAGTACTGGGCAATGCAATGCTAGATATGTATGCAAAGAATGGATGTTTGTATGAAGCTAAGAAAATATTTGACGAGCTCCCAACGAGAGATATTGTGTCTTGGACTATCATGATCACTGGATTGATGCAGAGTGACAATCCAAAAGAGTCATTGGAACTGTTTTCAATGATGCGAACCTTGGGTATTAGCCCTGATGCGATTATTTTAACTAGTGTTCTTTCTGCTTGTGCTAGCCTAGGAACTCTTGACTTTGGCACATGGGTTCATGAGTACATAAATCAAAGAGGAATCAAATGGGATATCCATATTGGAACTGCTATTGTTGACATGTATGCCAAATGTGGATGTATCGAAATGGCACTGCAAATCTTTTACAATATGCCTCAAAGAAATACCTTCACTTGGAATGCCTTGTTATGCGGTCTGGCAATGCATGGACTTGCGCATGAAGCATTAAATCTTTTTGAAGTAATGATAATATCTGGTGTCAAGCCTAACGAGGTAACGTTTCTAGCGATTATGACAGCTTGCTGCCATTCTGGTATGGTCGACGAAGGGCGCAAGTATTTTAATAACATGAGTGGTCAACTTTACAATTTGTTGCCGAAGTTGGAGCATTATGGATGCATGATTGATTTGTTCTGTCGAGCTGGACTCTTGGAGGAAGCTGTGGAGTTGGCAAGGACCATGCCAATGAAGCCTGATGTGCTTATCTGGGGAGTGCTACTAAATGCTTGCAGAACTGTTGGAAATGTTGAGCTCTCTCATCACATACAAGATTACATCTTGGAACTTGATCCGGAGGACAGTGGAGTCTTTGTGCTGCTGTCCAATATATCTGCTACTAATGAAAGATGGTCCGATGTGATTCGATTAAGGAGGTTGATGAAGGATAGAGGTGTTAACAAAGCACCTGGATCAAGTGTCATTGAGGTGTATGGTAAGGCTCACGAGTTTGTGGTTGGAGATATTAGCCACCTCCAAACTGAAGAAATCTTCCAAGTGTTAAACCTCATTAACTCTGTCTACAATGAATGCCAATTGATGCATCCATTGTAG

mRNA sequence

ATGTTCAATCTAAAATGGGTTCTATTAGATTCAGTTAAAAATTGTAAGAGCTTAAGGATCTTTAGACAAATTCATGCTCAGTTGGTAACATCAGGGTTAGTTTACGATGACTTTGTCACAACCAAAGTGATGGAATTCTTTGCCAATTTTGTTGAGTATGGTGACTATGCCTGTGATTATTTAAAACAAGACAACGCTCGCTTAGGTTCATTTCCATTCAACTCACTGATTAATGTGTATGTTGGTGGTGACTTGCCACAAATGGCGGTTTCAGTTTATAGAAGGATGGTGAGAGATGGGTTTGTGCCTGATATGTTTACTTTTCCAGTCCTTCTGAAAGCATGCTCTAACTTTTCAGGGAGCAGAGAAGGCAGACAGGTTCATAGCGTGGTGGTTAAGTTGGGGCTTTTGGCTGATCTTTATGTACAAAACTCACTGATTCGTTTCTATGGAGCTTGTGGGGATTTTTCTTGTGCAGGCAGGGTGTTTGATGAAATGCTTGTTCGAGATGTTGTTTCGTGGAACAGTTTGATATCTGGGTTCATGAAGGCGGGGCATTTTGATGAGGCTATTTCTTTGTTTTTTAGAATGAATGTGGAGCCAAGCATTGCAACTTTAATCAATGTGCTTACTGCTTGTGCAAGAAAGGGTGACTTGTGTATGGGGAAGGGAATTCATGGTGTGATCGAGCGAAGGTTTAAGTTGGATTTAGTACTGGGCAATGCAATGCTAGATATGTATGCAAAGAATGGATGTTTGTATGAAGCTAAGAAAATATTTGACGAGCTCCCAACGAGAGATATTGTGTCTTGGACTATCATGATCACTGGATTGATGCAGAGTGACAATCCAAAAGAGTCATTGGAACTGTTTTCAATGATGCGAACCTTGGGTATTAGCCCTGATGCGATTATTTTAACTAGTGTTCTTTCTGCTTGTGCTAGCCTAGGAACTCTTGACTTTGGCACATGGGTTCATGAGTACATAAATCAAAGAGGAATCAAATGGGATATCCATATTGGAACTGCTATTGTTGACATGTATGCCAAATGTGGATGTATCGAAATGGCACTGCAAATCTTTTACAATATGCCTCAAAGAAATACCTTCACTTGGAATGCCTTGTTATGCGGTCTGGCAATGCATGGACTTGCGCATGAAGCATTAAATCTTTTTGAAGTAATGATAATATCTGGTGTCAAGCCTAACGAGGTAACGTTTCTAGCGATTATGACAGCTTGCTGCCATTCTGGTATGGTCGACGAAGGGCGCAAGTATTTTAATAACATGAGTGGTCAACTTTACAATTTGTTGCCGAAGTTGGAGCATTATGGATGCATGATTGATTTGTTCTGTCGAGCTGGACTCTTGGAGGAAGCTGTGGAGTTGGCAAGGACCATGCCAATGAAGCCTGATGTGCTTATCTGGGGAGTGCTACTAAATGCTTGCAGAACTGTTGGAAATGTTGAGCTCTCTCATCACATACAAGATTACATCTTGGAACTTGATCCGGAGGACAGTGGAGTCTTTGTGCTGCTGTCCAATATATCTGCTACTAATGAAAGATGGTCCGATGTGATTCGATTAAGGAGGTTGATGAAGGATAGAGGTGTTAACAAAGCACCTGGATCAAGTGTCATTGAGGTGTATGGTAAGGCTCACGAGTTTGTGGTTGGAGATATTAGCCACCTCCAAACTGAAGAAATCTTCCAAGTGTTAAACCTCATTAACTCTGTCTACAATGAATGCCAATTGATGCATCCATTGTAG

Coding sequence (CDS)

ATGTTCAATCTAAAATGGGTTCTATTAGATTCAGTTAAAAATTGTAAGAGCTTAAGGATCTTTAGACAAATTCATGCTCAGTTGGTAACATCAGGGTTAGTTTACGATGACTTTGTCACAACCAAAGTGATGGAATTCTTTGCCAATTTTGTTGAGTATGGTGACTATGCCTGTGATTATTTAAAACAAGACAACGCTCGCTTAGGTTCATTTCCATTCAACTCACTGATTAATGTGTATGTTGGTGGTGACTTGCCACAAATGGCGGTTTCAGTTTATAGAAGGATGGTGAGAGATGGGTTTGTGCCTGATATGTTTACTTTTCCAGTCCTTCTGAAAGCATGCTCTAACTTTTCAGGGAGCAGAGAAGGCAGACAGGTTCATAGCGTGGTGGTTAAGTTGGGGCTTTTGGCTGATCTTTATGTACAAAACTCACTGATTCGTTTCTATGGAGCTTGTGGGGATTTTTCTTGTGCAGGCAGGGTGTTTGATGAAATGCTTGTTCGAGATGTTGTTTCGTGGAACAGTTTGATATCTGGGTTCATGAAGGCGGGGCATTTTGATGAGGCTATTTCTTTGTTTTTTAGAATGAATGTGGAGCCAAGCATTGCAACTTTAATCAATGTGCTTACTGCTTGTGCAAGAAAGGGTGACTTGTGTATGGGGAAGGGAATTCATGGTGTGATCGAGCGAAGGTTTAAGTTGGATTTAGTACTGGGCAATGCAATGCTAGATATGTATGCAAAGAATGGATGTTTGTATGAAGCTAAGAAAATATTTGACGAGCTCCCAACGAGAGATATTGTGTCTTGGACTATCATGATCACTGGATTGATGCAGAGTGACAATCCAAAAGAGTCATTGGAACTGTTTTCAATGATGCGAACCTTGGGTATTAGCCCTGATGCGATTATTTTAACTAGTGTTCTTTCTGCTTGTGCTAGCCTAGGAACTCTTGACTTTGGCACATGGGTTCATGAGTACATAAATCAAAGAGGAATCAAATGGGATATCCATATTGGAACTGCTATTGTTGACATGTATGCCAAATGTGGATGTATCGAAATGGCACTGCAAATCTTTTACAATATGCCTCAAAGAAATACCTTCACTTGGAATGCCTTGTTATGCGGTCTGGCAATGCATGGACTTGCGCATGAAGCATTAAATCTTTTTGAAGTAATGATAATATCTGGTGTCAAGCCTAACGAGGTAACGTTTCTAGCGATTATGACAGCTTGCTGCCATTCTGGTATGGTCGACGAAGGGCGCAAGTATTTTAATAACATGAGTGGTCAACTTTACAATTTGTTGCCGAAGTTGGAGCATTATGGATGCATGATTGATTTGTTCTGTCGAGCTGGACTCTTGGAGGAAGCTGTGGAGTTGGCAAGGACCATGCCAATGAAGCCTGATGTGCTTATCTGGGGAGTGCTACTAAATGCTTGCAGAACTGTTGGAAATGTTGAGCTCTCTCATCACATACAAGATTACATCTTGGAACTTGATCCGGAGGACAGTGGAGTCTTTGTGCTGCTGTCCAATATATCTGCTACTAATGAAAGATGGTCCGATGTGATTCGATTAAGGAGGTTGATGAAGGATAGAGGTGTTAACAAAGCACCTGGATCAAGTGTCATTGAGGTGTATGGTAAGGCTCACGAGTTTGTGGTTGGAGATATTAGCCACCTCCAAACTGAAGAAATCTTCCAAGTGTTAAACCTCATTAACTCTGTCTACAATGAATGCCAATTGATGCATCCATTGTAG

Protein sequence

MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDYLKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLGNAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNECQLMHPL
Homology
BLAST of Lsi05G012730 vs. ExPASy Swiss-Prot
Match: Q9SZK1 (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E45 PE=3 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 4.4e-173
Identity = 297/549 (54.10%), Postives = 385/549 (70.13%), Query Frame = 0

Query: 5   KWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDYLKQD 64
           K VLL+ +  C SLR+F+QI  QL+T  L+ DD +  KV+ F     ++  Y+   L   
Sbjct: 6   KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSI 65

Query: 65  NARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREG 124
            + L SF +N+L++ Y   D P++ +  Y+  V +GF PDMFTFP + KAC  FSG REG
Sbjct: 66  RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125

Query: 125 RQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFMKA 184
           +Q+H +V K+G   D+YVQNSL+ FYG CG+   A +VF EM VRDVVSW  +I+GF + 
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185

Query: 185 GHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKL-DLVLGNAM 244
           G + EA+  F +M+VEP++AT + VL +  R G L +GKGIHG+I +R  L  L  GNA+
Sbjct: 186 GLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245

Query: 245 LDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRT-LGISPD 304
           +DMY K   L +A ++F EL  +D VSW  MI+GL+  +  KE+++LFS+M+T  GI PD
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305

Query: 305 AIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFY 364
             ILTSVLSACASLG +D G WVHEYI   GIKWD HIGTAIVDMYAKCG IE AL+IF 
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365

Query: 365 NMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDE 424
            +  +N FTWNALL GLA+HG   E+L  FE M+  G KPN VTFLA + ACCH+G+VDE
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425

Query: 425 GRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNA 484
           GR+YF+ M  + YNL PKLEHYGCMIDL CRAGLL+EA+EL + MP+KPDV I G +L+A
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485

Query: 485 CRTVGN-VELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNKA 544
           C+  G  +EL   I D  L+++ EDSGV+VLLSNI A N RW DV R+RRLMK +G++K 
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545

Query: 545 PGSSVIEVY 551
           PGSS IE +
Sbjct: 546 PGSSYIEKF 554

BLAST of Lsi05G012730 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 1.4e-123
Identity = 238/609 (39.08%), Postives = 358/609 (58.78%), Query Frame = 0

Query: 8   LLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFA-NFVEYGDYACDYLKQ-DN 67
           LL  ++ CK L   +QI AQ++ +GL+ D F +++++ F A +   Y DY+   LK  +N
Sbjct: 56  LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115

Query: 68  ARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFV---PDMFTFPVLLKACSNFSGSR 127
             +  F +N  I  +   + P+ +  +Y++M+R G     PD FT+PVL K C++   S 
Sbjct: 116 PNI--FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 175

Query: 128 EGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFM 187
            G  +   V+KL L    +V N+ I  + +CGD   A +VFDE  VRD+VSWN LI+G+ 
Sbjct: 176 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 235

Query: 188 KAGHFDEAISLFFRM---NVEPSIATLINVLTACARKGDLCMGKGIHGVI-ERRFKLDLV 247
           K G  ++AI ++  M    V+P   T+I ++++C+  GDL  GK  +  + E   ++ + 
Sbjct: 236 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 295

Query: 248 LGNAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGL-------------------- 307
           L NA++DM++K G ++EA++IFD L  R IVSWT MI+G                     
Sbjct: 296 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 355

Query: 308 -----------MQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHE 367
                      +Q+   +++L LF  M+T    PD I +   LSAC+ LG LD G W+H 
Sbjct: 356 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 415

Query: 368 YINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHE 427
           YI +  +  ++ +GT++VDMYAKCG I  AL +F+ +  RN+ T+ A++ GLA+HG A  
Sbjct: 416 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 475

Query: 428 ALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCM 487
           A++ F  MI +G+ P+E+TF+ +++ACCH GM+  GR YF+ M  + +NL P+L+HY  M
Sbjct: 476 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR-FNLNPQLKHYSIM 535

Query: 488 IDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDS 547
           +DL  RAGLLEEA  L  +MPM+ D  +WG LL  CR  GNVEL       +LELDP DS
Sbjct: 536 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 595

Query: 548 GVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTE 577
           G++VLL  +      W D  R RR+M +RGV K PG S IEV G   EF+V D S  ++E
Sbjct: 596 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 655

BLAST of Lsi05G012730 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 6.2e-119
Identity = 227/607 (37.40%), Postives = 360/607 (59.31%), Query Frame = 0

Query: 9   LDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEF--FANFVEYGDYACDYLK---Q 68
           L  + NCK+L+  R IHAQ++  GL   ++  +K++EF   +   E   YA    K   +
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 69  DNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSRE 128
            N  +    +N++   +     P  A+ +Y  M+  G +P+ +TFP +LK+C+     +E
Sbjct: 97  PNLLI----WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE 156

Query: 129 GRQVHSVVVKLGLLADLYVQNS-------------------------------LIRFYGA 188
           G+Q+H  V+KLG   DLYV  S                               LI+ Y +
Sbjct: 157 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 216

Query: 189 CGDFSCAGRVFDEMLVRDVVSWNSLISGFMKAGHFDEAISLF---FRMNVEPSIATLINV 248
            G    A ++FDE+ V+DVVSWN++ISG+ + G++ EA+ LF    + NV P  +T++ V
Sbjct: 217 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 276

Query: 249 LTACARKGDLCMGKGIH-GVIERRFKLDLVLGNAMLDMYAKNGCLYEAKKIFDELPTRDI 308
           ++ACA+ G + +G+ +H  + +  F  +L + NA++D+Y+K G L  A  +F+ LP +D+
Sbjct: 277 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 336

Query: 309 VSWTIMITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEY 368
           +SW  +I G    +  KE+L LF  M   G +P+ + + S+L ACA LG +D G W+H Y
Sbjct: 337 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 396

Query: 369 INQR--GIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAH 428
           I++R  G+     + T+++DMYAKCG IE A Q+F ++  ++  +WNA++ G AMHG A 
Sbjct: 397 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 456

Query: 429 EALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGC 488
            + +LF  M   G++P+++TF+ +++AC HSGM+D GR  F  M+ Q Y + PKLEHYGC
Sbjct: 457 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT-QDYKMTPKLEHYGC 516

Query: 489 MIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPED 548
           MIDL   +GL +EA E+   M M+PD +IW  LL AC+  GNVEL     + +++++PE+
Sbjct: 517 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 576

Query: 549 SGVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQT 574
            G +VLLSNI A+  RW++V + R L+ D+G+ K PG S IE+    HEF++GD  H + 
Sbjct: 577 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 636

BLAST of Lsi05G012730 vs. ExPASy Swiss-Prot
Match: O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 7.6e-117
Identity = 228/611 (37.32%), Postives = 345/611 (56.46%), Query Frame = 0

Query: 8   LLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYG-----DYACDYLK 67
           +L+ +  CKSL   +Q+HA ++ +       +  K+  F  N           YA +   
Sbjct: 15  ILEKLSFCKSLNHIKQLHAHILRT------VINHKLNSFLFNLSVSSSSINLSYALNVFS 74

Query: 68  QDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSR 127
              +   S  FN  +        P+  +  Y+R+   G   D F+F  +LKA S  S   
Sbjct: 75  SIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALF 134

Query: 128 EGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFM 187
           EG ++H V  K+  L D +V+   +  Y +CG  + A  VFDEM  RDVV+WN++I  + 
Sbjct: 135 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 194

Query: 188 KAGHFDEAISLFFRM---NVEPSIATLINVLTACARKGDLCMGKGIHG-VIERRFKLDLV 247
           + G  DEA  LF  M   NV P    L N+++AC R G++   + I+  +IE   ++D  
Sbjct: 195 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 254

Query: 248 LGNAMLDMYAKNGC-------------------------------LYEAKKIFDELPTRD 307
           L  A++ MYA  GC                               L +A+ IFD+   +D
Sbjct: 255 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 314

Query: 308 IVSWTIMITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHE 367
           +V WT MI+  ++SD P+E+L +F  M   GI PD + + SV+SACA+LG LD   WVH 
Sbjct: 315 LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHS 374

Query: 368 YINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHE 427
            I+  G++ ++ I  A+++MYAKCG ++    +F  MP+RN  +W++++  L+MHG A +
Sbjct: 375 CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASD 434

Query: 428 ALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCM 487
           AL+LF  M    V+PNEVTF+ ++  C HSG+V+EG+K F +M+ + YN+ PKLEHYGCM
Sbjct: 435 ALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDE-YNITPKLEHYGCM 494

Query: 488 IDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDS 547
           +DLF RA LL EA+E+  +MP+  +V+IWG L++ACR  G +EL       ILEL+P+  
Sbjct: 495 VDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 554

Query: 548 GVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTE 579
           G  VL+SNI A  +RW DV  +RR+M+++ V K  G S I+  GK+HEF++GD  H Q+ 
Sbjct: 555 GALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSN 614

BLAST of Lsi05G012730 vs. ExPASy Swiss-Prot
Match: Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 416.8 bits (1070), Expect = 4.2e-115
Identity = 226/599 (37.73%), Postives = 344/599 (57.43%), Query Frame = 0

Query: 15  CKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFAN----FVEYGDYACDYLKQDNARLGS 74
           CK+   F+Q+H+Q +T G+  +     K+  F+ +     V Y       + + +  +  
Sbjct: 44  CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVV-- 103

Query: 75  FPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSRE-GRQVHS 134
             +N++I  +   D     V +Y  M+++G  PD  TFP LL       G+   G+++H 
Sbjct: 104 --WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 163

Query: 135 VVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFMKAGHFDE 194
            VVK GL ++LYVQN+L++ Y  CG    A  VFD     DV SWN +ISG+ +   ++E
Sbjct: 164 HVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEE 223

Query: 195 AISLFFRMN---VEPSIATLINVLTACARKGDLCMGKGIHG-VIERRFKLDLVLGNAMLD 254
           +I L   M    V P+  TL+ VL+AC++  D  + K +H  V E + +  L L NA+++
Sbjct: 224 SIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVN 283

Query: 255 MYA-------------------------------KNGCLYEAKKIFDELPTRDIVSWTIM 314
            YA                               + G L  A+  FD++P RD +SWTIM
Sbjct: 284 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 343

Query: 315 ITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGI 374
           I G +++    ESLE+F  M++ G+ PD   + SVL+ACA LG+L+ G W+  YI++  I
Sbjct: 344 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKI 403

Query: 375 KWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEV 434
           K D+ +G A++DMY KCGC E A ++F++M QR+ FTW A++ GLA +G   EA+ +F  
Sbjct: 404 KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQ 463

Query: 435 MIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRA 494
           M    ++P+++T+L +++AC HSGMVD+ RK+F  M    + + P L HYGCM+D+  RA
Sbjct: 464 MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD-HRIEPSLVHYGCMVDMLGRA 523

Query: 495 GLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDSGVFVLLS 554
           GL++EA E+ R MPM P+ ++WG LL A R   +  ++      ILEL+P++  V+ LL 
Sbjct: 524 GLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLC 583

Query: 555 NISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTEEIFQVL 574
           NI A  +RW D+  +RR + D  + K PG S+IEV G AHEFV GD SHLQ+EEI+  L
Sbjct: 584 NIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 637

BLAST of Lsi05G012730 vs. ExPASy TrEMBL
Match: A0A0A0LF19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004700 PE=4 SV=1)

HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 525/582 (90.21%), Postives = 557/582 (95.70%), Query Frame = 0

Query: 1   MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
           L+Q N RLGSFPFNSLIN YVGG+ PQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
           SREGRQVH VVVKLGLLAD YVQNSLIR YGACGDFSCAG+VFDEMLVRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
           FMKAGHFDEAIS+FFRM+VEPS+ TL++VL ACAR GDLC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
           NAMLDMY KNGC YEAK IFDELPTRDIVSWTIMITGL+QSD+PK+SLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMAL+I
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360

Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
           FY+M QRNTFTWNALLCGLAMHGL HEALNLFEVMIISGVKPNE+TFLAI+TACCH G+V
Sbjct: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLV 420

Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
           DEGRKYF+NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWG+LL
Sbjct: 421 DEGRKYFDNMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLL 480

Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
           NAC TVGN+ELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRK 540

Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
           APGSSVIEV GKAHEFVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581

BLAST of Lsi05G012730 vs. ExPASy TrEMBL
Match: A0A5D3CGR6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00240 PE=4 SV=1)

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 525/582 (90.21%), Postives = 558/582 (95.88%), Query Frame = 0

Query: 1   MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
           L+Q N RLGSFPFNSLIN YVGG+ PQ AVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
           SREGRQVH VVVKLGLLADLYVQNSLIR YGACGD SCAG+VFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
           FMKAGHFDEAIS+FFRM+VEPSIATL++VL ACAR G+LC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
           NAMLDMY KNGC YEAKK+FDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
           FY+MPQRNTFTWNALLCGLAMHGL HEAL+LFEVM ISGV+PNE+TFLAI+TACCHSG+V
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420

Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
           DEGRKYF+NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLL
Sbjct: 421 DEGRKYFDNMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLL 480

Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
           NAC TVGNVELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKK 540

Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
           APGSSVIEV GKAHEFVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581

BLAST of Lsi05G012730 vs. ExPASy TrEMBL
Match: A0A1S3C7P6 (pentatricopeptide repeat-containing protein At4g38010 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497763 PE=4 SV=1)

HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 525/582 (90.21%), Postives = 557/582 (95.70%), Query Frame = 0

Query: 1   MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
           L+Q N RLGSFPFNSLIN YVGG+ PQ AVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
           SREGRQVH VVVKLGLLADLYVQNSLIR YGACGD SCAG+VFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
           FMKAGHFDEAIS+FFRM+VEPSIATL++VL ACAR G+LC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
           NAMLDMY KNGC YEAKK+FDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
           FY+MPQRNTFTWNALLCGLAMHGL HEAL+LFEVM ISGV+PNE+TFLAI+TACCHSG+V
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420

Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
           DEGRKYF NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLL
Sbjct: 421 DEGRKYFENMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLL 480

Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
           NAC TVGNVELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKK 540

Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
           APGSSVIEV GKAHEFVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581

BLAST of Lsi05G012730 vs. ExPASy TrEMBL
Match: A0A5A7V3V4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001190 PE=4 SV=1)

HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 523/582 (89.86%), Postives = 558/582 (95.88%), Query Frame = 0

Query: 1   MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
           L+Q N RLGSFPFNSLIN YVGG+ PQ AVSV+RRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVFRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
           SREGRQVH VVVKLGLLADLYVQNSLIR YGACGD SCAG+VFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
           FMKAGHFDEAIS+FFRM+VEPSIATL++VL ACAR G+LC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
           NAMLDMY KNGC YEAKK+FDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
           FY+MPQRNTFTWNALLCGLAMHGL HEAL+LFEVM ISGV+PNE+TFLAI+TACCHSG+V
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420

Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
           DEGRKYF+NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLL
Sbjct: 421 DEGRKYFDNMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLL 480

Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
           NAC TVGNVELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKK 540

Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
           APGSSVIEV GKAH+FVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHDFVVGDISHLQTEEIYKVLNLINSVYHE 581

BLAST of Lsi05G012730 vs. ExPASy TrEMBL
Match: A0A6J1HYD9 (pentatricopeptide repeat-containing protein At4g38010 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467390 PE=4 SV=1)

HSP 1 Score: 1067.8 bits (2760), Expect = 1.7e-308
Identity = 513/588 (87.24%), Postives = 553/588 (94.05%), Query Frame = 0

Query: 1   MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDS+K+CK+LRIF++IHAQLVTSGLVYDDFVT KV+EFFANFVE+GDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFKKIHAQLVTSGLVYDDFVTNKVVEFFANFVEFGDYACDY 60

Query: 61  LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
           LKQ N RLGSFPFNSLIN Y GG+ PQMAVSVYRRM RDGFVPD+FTFPVL KACSNFSG
Sbjct: 61  LKQVNTRLGSFPFNSLINGYAGGEFPQMAVSVYRRMARDGFVPDLFTFPVLFKACSNFSG 120

Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
           SREGRQVH VV+KLG+L+DL+VQNSL+R YGAC DFSCAG+VFDEMLVRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVIKLGILSDLFVQNSLVRCYGACEDFSCAGKVFDEMLVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
           FMKAG FD+AISLFFRM+VEPS+ATL++VL ACARKGDL MGKGIHG+I+RRFKLDLVLG
Sbjct: 181 FMKAGRFDDAISLFFRMDVEPSVATLVSVLAACARKGDLYMGKGIHGMIQRRFKLDLVLG 240

Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
           NAMLDMYAKNGCLYEAK IFDELPTRDIVSWTIMITGL+QS++PKESLELF MMR LGIS
Sbjct: 241 NAMLDMYAKNGCLYEAKNIFDELPTRDIVSWTIMITGLVQSNHPKESLELFWMMRNLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
           PD IILTSVLSACASLGTL +GTWVHEYINQRGIKWDIHIGTAIVDMYAKCGC+EMA QI
Sbjct: 301 PDGIILTSVLSACASLGTLKYGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCVEMARQI 360

Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
           F +MPQRNTFTWNALLCGLAMHGLAHEAL LFEVMIISGVK NEVTFLAI+TACCHSG+V
Sbjct: 361 FNSMPQRNTFTWNALLCGLAMHGLAHEALYLFEVMIISGVKTNEVTFLAILTACCHSGLV 420

Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
           DEGRKYF+NMS Q YNL PKLEHYGCMIDLFCRAGLLEEAVEL RTMPMKPDVLIWGVLL
Sbjct: 421 DEGRKYFDNMSSQRYNLSPKLEHYGCMIDLFCRAGLLEEAVELVRTMPMKPDVLIWGVLL 480

Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
           NAC+TVGNVELS HIQ+YILELDPEDSGVFVLLSNISATNERWS+V RLRRLMKDRGV K
Sbjct: 481 NACKTVGNVELSQHIQEYILELDPEDSGVFVLLSNISATNERWSNVTRLRRLMKDRGVKK 540

Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNECQLMHP 589
           +PGSSVIEV GKAHEFV GDIS+LQTEEI++VL LINSV++E  LMHP
Sbjct: 541 SPGSSVIEVDGKAHEFVAGDISNLQTEEIYKVLTLINSVFHESHLMHP 588

BLAST of Lsi05G012730 vs. NCBI nr
Match: XP_038889932.1 (pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889934.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889935.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889936.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889937.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889938.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889939.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889940.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_038889941.1 pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida])

HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 528/582 (90.72%), Postives = 562/582 (96.56%), Query Frame = 0

Query: 1   MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
           MFNLKWVLL SV++CK+LRIFRQIHAQLVTSGLV DDFVT+KV+EFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLHSVEDCKNLRIFRQIHAQLVTSGLVCDDFVTSKVIEFFANFVEYGDYACDY 60

Query: 61  LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
           LKQ + RLGSFPFNSLIN YV G+LPQ+AVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61  LKQGSTRLGSFPFNSLINGYV-GELPQLAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
           SREGRQ+H VVVKLGLLAD YVQNSLI  YGACGDFSCAGRVFDEMLVRDVVSWNSLISG
Sbjct: 121 SREGRQIHGVVVKLGLLADHYVQNSLICCYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
           FMK GHFDEAISLFFRM+VEPSIATL++VL ACARKGDLCMGKGIHGVIERRFKL+L+LG
Sbjct: 181 FMKVGHFDEAISLFFRMDVEPSIATLVSVLAACARKGDLCMGKGIHGVIERRFKLNLILG 240

Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
           NAMLDMY KNGCLYEAKKIFDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGI+
Sbjct: 241 NAMLDMYVKNGCLYEAKKIFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIN 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
           PDAIILTSVLSAC+SLGTLDFGTWVHEYINQR IKWD+HIGTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACSSLGTLDFGTWVHEYINQRRIKWDVHIGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
           FYNMP++NTFTWNALLCGLAMHGL +EALNLFEVMI SGVKPNEVTFLAI+TACCHSG+V
Sbjct: 361 FYNMPKKNTFTWNALLCGLAMHGLVYEALNLFEVMIKSGVKPNEVTFLAILTACCHSGLV 420

Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
           +EGRKYFNNMS QLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL
Sbjct: 421 NEGRKYFNNMSSQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480

Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
           NAC+TVGNV+LSHHI+DYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGV K
Sbjct: 481 NACKTVGNVDLSHHIRDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVEK 540

Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
           APGSSVIEV GKAHEFV GDISHLQT+EI+++L+LINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVAGDISHLQTKEIYKLLSLINSVYHE 581

BLAST of Lsi05G012730 vs. NCBI nr
Match: XP_031736963.1 (pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cucumis sativus])

HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 525/582 (90.21%), Postives = 557/582 (95.70%), Query Frame = 0

Query: 1   MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
           L+Q N RLGSFPFNSLIN YVGG+ PQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
           SREGRQVH VVVKLGLLAD YVQNSLIR YGACGDFSCAG+VFDEMLVRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
           FMKAGHFDEAIS+FFRM+VEPS+ TL++VL ACAR GDLC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
           NAMLDMY KNGC YEAK IFDELPTRDIVSWTIMITGL+QSD+PK+SLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMAL+I
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKI 360

Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
           FY+M QRNTFTWNALLCGLAMHGL HEALNLFEVMIISGVKPNE+TFLAI+TACCH G+V
Sbjct: 361 FYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLV 420

Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
           DEGRKYF+NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWG+LL
Sbjct: 421 DEGRKYFDNMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLL 480

Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
           NAC TVGN+ELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRK 540

Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
           APGSSVIEV GKAHEFVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581

BLAST of Lsi05G012730 vs. NCBI nr
Match: TYK10715.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 525/582 (90.21%), Postives = 558/582 (95.88%), Query Frame = 0

Query: 1   MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
           L+Q N RLGSFPFNSLIN YVGG+ PQ AVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
           SREGRQVH VVVKLGLLADLYVQNSLIR YGACGD SCAG+VFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
           FMKAGHFDEAIS+FFRM+VEPSIATL++VL ACAR G+LC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
           NAMLDMY KNGC YEAKK+FDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
           FY+MPQRNTFTWNALLCGLAMHGL HEAL+LFEVM ISGV+PNE+TFLAI+TACCHSG+V
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420

Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
           DEGRKYF+NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLL
Sbjct: 421 DEGRKYFDNMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLL 480

Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
           NAC TVGNVELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKK 540

Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
           APGSSVIEV GKAHEFVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581

BLAST of Lsi05G012730 vs. NCBI nr
Match: XP_008458315.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cucumis melo])

HSP 1 Score: 1085.1 bits (2805), Expect = 0.0e+00
Identity = 525/582 (90.21%), Postives = 557/582 (95.70%), Query Frame = 0

Query: 1   MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
           L+Q N RLGSFPFNSLIN YVGG+ PQ AVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
           SREGRQVH VVVKLGLLADLYVQNSLIR YGACGD SCAG+VFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
           FMKAGHFDEAIS+FFRM+VEPSIATL++VL ACAR G+LC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
           NAMLDMY KNGC YEAKK+FDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
           FY+MPQRNTFTWNALLCGLAMHGL HEAL+LFEVM ISGV+PNE+TFLAI+TACCHSG+V
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420

Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
           DEGRKYF NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLL
Sbjct: 421 DEGRKYFENMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLL 480

Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
           NAC TVGNVELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKK 540

Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
           APGSSVIEV GKAHEFVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581

BLAST of Lsi05G012730 vs. NCBI nr
Match: KAA0061557.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 523/582 (89.86%), Postives = 558/582 (95.88%), Query Frame = 0

Query: 1   MFNLKWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDY 60
           MFNLKWVLLDS+K+CK+LRIFRQIHAQLVTSGLVYDDFVT+KVMEFFANFVEYGDYACDY
Sbjct: 1   MFNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDY 60

Query: 61  LKQDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSG 120
           L+Q N RLGSFPFNSLIN YVGG+ PQ AVSV+RRMVRDGFVPDMFTFPVLLKACSNFSG
Sbjct: 61  LEQGNTRLGSFPFNSLINGYVGGEFPQTAVSVFRRMVRDGFVPDMFTFPVLLKACSNFSG 120

Query: 121 SREGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISG 180
           SREGRQVH VVVKLGLLADLYVQNSLIR YGACGD SCAG+VFDEM+VRDVVSWNSLISG
Sbjct: 121 SREGRQVHGVVVKLGLLADLYVQNSLIRCYGACGDLSCAGKVFDEMVVRDVVSWNSLISG 180

Query: 181 FMKAGHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKLDLVLG 240
           FMKAGHFDEAIS+FFRM+VEPSIATL++VL ACAR G+LC GKGIHGVIERRFK++LVLG
Sbjct: 181 FMKAGHFDEAISVFFRMDVEPSIATLVSVLAACARNGNLCTGKGIHGVIERRFKVNLVLG 240

Query: 241 NAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRTLGIS 300
           NAMLDMY KNGC YEAKK+FDELPTRDIVSWTIMITGL+QSD+PKESLELFSMMRTLGIS
Sbjct: 241 NAMLDMYVKNGCFYEAKKMFDELPTRDIVSWTIMITGLVQSDHPKESLELFSMMRTLGIS 300

Query: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQI 360
           PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH GTAIVDMYAKCGCIEMALQI
Sbjct: 301 PDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHTGTAIVDMYAKCGCIEMALQI 360

Query: 361 FYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMV 420
           FY+MPQRNTFTWNALLCGLAMHGL HEAL+LFEVM ISGV+PNE+TFLAI+TACCHSG+V
Sbjct: 361 FYSMPQRNTFTWNALLCGLAMHGLVHEALDLFEVMTISGVEPNEITFLAILTACCHSGLV 420

Query: 421 DEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLL 480
           DEGRKYF+NMS +LYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPD+LIWGVLL
Sbjct: 421 DEGRKYFDNMS-KLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDMLIWGVLL 480

Query: 481 NACRTVGNVELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNK 540
           NAC TVGNVELSH IQDYILELD +DSGVFVLLSNISA N+RWS+V RLRRLMKDRGV K
Sbjct: 481 NACTTVGNVELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVKK 540

Query: 541 APGSSVIEVYGKAHEFVVGDISHLQTEEIFQVLNLINSVYNE 583
           APGSSVIEV GKAH+FVVGDISHLQTEEI++VLNLINSVY+E
Sbjct: 541 APGSSVIEVDGKAHDFVVGDISHLQTEEIYKVLNLINSVYHE 581

BLAST of Lsi05G012730 vs. TAIR 10
Match: AT4G38010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 609.4 bits (1570), Expect = 3.1e-174
Identity = 297/549 (54.10%), Postives = 385/549 (70.13%), Query Frame = 0

Query: 5   KWVLLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYGDYACDYLKQD 64
           K VLL+ +  C SLR+F+QI  QL+T  L+ DD +  KV+ F     ++  Y+   L   
Sbjct: 6   KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSI 65

Query: 65  NARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREG 124
            + L SF +N+L++ Y   D P++ +  Y+  V +GF PDMFTFP + KAC  FSG REG
Sbjct: 66  RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125

Query: 125 RQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFMKA 184
           +Q+H +V K+G   D+YVQNSL+ FYG CG+   A +VF EM VRDVVSW  +I+GF + 
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185

Query: 185 GHFDEAISLFFRMNVEPSIATLINVLTACARKGDLCMGKGIHGVIERRFKL-DLVLGNAM 244
           G + EA+  F +M+VEP++AT + VL +  R G L +GKGIHG+I +R  L  L  GNA+
Sbjct: 186 GLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245

Query: 245 LDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGLMQSDNPKESLELFSMMRT-LGISPD 304
           +DMY K   L +A ++F EL  +D VSW  MI+GL+  +  KE+++LFS+M+T  GI PD
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305

Query: 305 AIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFY 364
             ILTSVLSACASLG +D G WVHEYI   GIKWD HIGTAIVDMYAKCG IE AL+IF 
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365

Query: 365 NMPQRNTFTWNALLCGLAMHGLAHEALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDE 424
            +  +N FTWNALL GLA+HG   E+L  FE M+  G KPN VTFLA + ACCH+G+VDE
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425

Query: 425 GRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNA 484
           GR+YF+ M  + YNL PKLEHYGCMIDL CRAGLL+EA+EL + MP+KPDV I G +L+A
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485

Query: 485 CRTVGN-VELSHHIQDYILELDPEDSGVFVLLSNISATNERWSDVIRLRRLMKDRGVNKA 544
           C+  G  +EL   I D  L+++ EDSGV+VLLSNI A N RW DV R+RRLMK +G++K 
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545

Query: 545 PGSSVIEVY 551
           PGSS IE +
Sbjct: 546 PGSSYIEKF 554

BLAST of Lsi05G012730 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 444.9 bits (1143), Expect = 1.0e-124
Identity = 238/609 (39.08%), Postives = 358/609 (58.78%), Query Frame = 0

Query: 8   LLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFA-NFVEYGDYACDYLKQ-DN 67
           LL  ++ CK L   +QI AQ++ +GL+ D F +++++ F A +   Y DY+   LK  +N
Sbjct: 56  LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115

Query: 68  ARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFV---PDMFTFPVLLKACSNFSGSR 127
             +  F +N  I  +   + P+ +  +Y++M+R G     PD FT+PVL K C++   S 
Sbjct: 116 PNI--FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 175

Query: 128 EGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFM 187
            G  +   V+KL L    +V N+ I  + +CGD   A +VFDE  VRD+VSWN LI+G+ 
Sbjct: 176 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 235

Query: 188 KAGHFDEAISLFFRM---NVEPSIATLINVLTACARKGDLCMGKGIHGVI-ERRFKLDLV 247
           K G  ++AI ++  M    V+P   T+I ++++C+  GDL  GK  +  + E   ++ + 
Sbjct: 236 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 295

Query: 248 LGNAMLDMYAKNGCLYEAKKIFDELPTRDIVSWTIMITGL-------------------- 307
           L NA++DM++K G ++EA++IFD L  R IVSWT MI+G                     
Sbjct: 296 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 355

Query: 308 -----------MQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHE 367
                      +Q+   +++L LF  M+T    PD I +   LSAC+ LG LD G W+H 
Sbjct: 356 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 415

Query: 368 YINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHE 427
           YI +  +  ++ +GT++VDMYAKCG I  AL +F+ +  RN+ T+ A++ GLA+HG A  
Sbjct: 416 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 475

Query: 428 ALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCM 487
           A++ F  MI +G+ P+E+TF+ +++ACCH GM+  GR YF+ M  + +NL P+L+HY  M
Sbjct: 476 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR-FNLNPQLKHYSIM 535

Query: 488 IDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDS 547
           +DL  RAGLLEEA  L  +MPM+ D  +WG LL  CR  GNVEL       +LELDP DS
Sbjct: 536 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 595

Query: 548 GVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTE 577
           G++VLL  +      W D  R RR+M +RGV K PG S IEV G   EF+V D S  ++E
Sbjct: 596 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 655

BLAST of Lsi05G012730 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 429.5 bits (1103), Expect = 4.4e-120
Identity = 227/607 (37.40%), Postives = 360/607 (59.31%), Query Frame = 0

Query: 9   LDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEF--FANFVEYGDYACDYLK---Q 68
           L  + NCK+L+  R IHAQ++  GL   ++  +K++EF   +   E   YA    K   +
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 69  DNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSRE 128
            N  +    +N++   +     P  A+ +Y  M+  G +P+ +TFP +LK+C+     +E
Sbjct: 97  PNLLI----WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE 156

Query: 129 GRQVHSVVVKLGLLADLYVQNS-------------------------------LIRFYGA 188
           G+Q+H  V+KLG   DLYV  S                               LI+ Y +
Sbjct: 157 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 216

Query: 189 CGDFSCAGRVFDEMLVRDVVSWNSLISGFMKAGHFDEAISLF---FRMNVEPSIATLINV 248
            G    A ++FDE+ V+DVVSWN++ISG+ + G++ EA+ LF    + NV P  +T++ V
Sbjct: 217 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 276

Query: 249 LTACARKGDLCMGKGIH-GVIERRFKLDLVLGNAMLDMYAKNGCLYEAKKIFDELPTRDI 308
           ++ACA+ G + +G+ +H  + +  F  +L + NA++D+Y+K G L  A  +F+ LP +D+
Sbjct: 277 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 336

Query: 309 VSWTIMITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEY 368
           +SW  +I G    +  KE+L LF  M   G +P+ + + S+L ACA LG +D G W+H Y
Sbjct: 337 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 396

Query: 369 INQR--GIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAH 428
           I++R  G+     + T+++DMYAKCG IE A Q+F ++  ++  +WNA++ G AMHG A 
Sbjct: 397 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 456

Query: 429 EALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGC 488
            + +LF  M   G++P+++TF+ +++AC HSGM+D GR  F  M+ Q Y + PKLEHYGC
Sbjct: 457 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT-QDYKMTPKLEHYGC 516

Query: 489 MIDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPED 548
           MIDL   +GL +EA E+   M M+PD +IW  LL AC+  GNVEL     + +++++PE+
Sbjct: 517 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 576

Query: 549 SGVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQT 574
            G +VLLSNI A+  RW++V + R L+ D+G+ K PG S IE+    HEF++GD  H + 
Sbjct: 577 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 636

BLAST of Lsi05G012730 vs. TAIR 10
Match: AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 422.5 bits (1085), Expect = 5.4e-118
Identity = 228/611 (37.32%), Postives = 345/611 (56.46%), Query Frame = 0

Query: 8   LLDSVKNCKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFANFVEYG-----DYACDYLK 67
           +L+ +  CKSL   +Q+HA ++ +       +  K+  F  N           YA +   
Sbjct: 15  ILEKLSFCKSLNHIKQLHAHILRT------VINHKLNSFLFNLSVSSSSINLSYALNVFS 74

Query: 68  QDNARLGSFPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSR 127
              +   S  FN  +        P+  +  Y+R+   G   D F+F  +LKA S  S   
Sbjct: 75  SIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALF 134

Query: 128 EGRQVHSVVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFM 187
           EG ++H V  K+  L D +V+   +  Y +CG  + A  VFDEM  RDVV+WN++I  + 
Sbjct: 135 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 194

Query: 188 KAGHFDEAISLFFRM---NVEPSIATLINVLTACARKGDLCMGKGIHG-VIERRFKLDLV 247
           + G  DEA  LF  M   NV P    L N+++AC R G++   + I+  +IE   ++D  
Sbjct: 195 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 254

Query: 248 LGNAMLDMYAKNGC-------------------------------LYEAKKIFDELPTRD 307
           L  A++ MYA  GC                               L +A+ IFD+   +D
Sbjct: 255 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 314

Query: 308 IVSWTIMITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHE 367
           +V WT MI+  ++SD P+E+L +F  M   GI PD + + SV+SACA+LG LD   WVH 
Sbjct: 315 LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHS 374

Query: 368 YINQRGIKWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHE 427
            I+  G++ ++ I  A+++MYAKCG ++    +F  MP+RN  +W++++  L+MHG A +
Sbjct: 375 CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASD 434

Query: 428 ALNLFEVMIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCM 487
           AL+LF  M    V+PNEVTF+ ++  C HSG+V+EG+K F +M+ + YN+ PKLEHYGCM
Sbjct: 435 ALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDE-YNITPKLEHYGCM 494

Query: 488 IDLFCRAGLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDS 547
           +DLF RA LL EA+E+  +MP+  +V+IWG L++ACR  G +EL       ILEL+P+  
Sbjct: 495 VDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 554

Query: 548 GVFVLLSNISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTE 579
           G  VL+SNI A  +RW DV  +RR+M+++ V K  G S I+  GK+HEF++GD  H Q+ 
Sbjct: 555 GALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSN 614

BLAST of Lsi05G012730 vs. TAIR 10
Match: AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 416.8 bits (1070), Expect = 3.0e-116
Identity = 226/599 (37.73%), Postives = 344/599 (57.43%), Query Frame = 0

Query: 15  CKSLRIFRQIHAQLVTSGLVYDDFVTTKVMEFFAN----FVEYGDYACDYLKQDNARLGS 74
           CK+   F+Q+H+Q +T G+  +     K+  F+ +     V Y       + + +  +  
Sbjct: 44  CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVV-- 103

Query: 75  FPFNSLINVYVGGDLPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSRE-GRQVHS 134
             +N++I  +   D     V +Y  M+++G  PD  TFP LL       G+   G+++H 
Sbjct: 104 --WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 163

Query: 135 VVVKLGLLADLYVQNSLIRFYGACGDFSCAGRVFDEMLVRDVVSWNSLISGFMKAGHFDE 194
            VVK GL ++LYVQN+L++ Y  CG    A  VFD     DV SWN +ISG+ +   ++E
Sbjct: 164 HVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEE 223

Query: 195 AISLFFRMN---VEPSIATLINVLTACARKGDLCMGKGIHG-VIERRFKLDLVLGNAMLD 254
           +I L   M    V P+  TL+ VL+AC++  D  + K +H  V E + +  L L NA+++
Sbjct: 224 SIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVN 283

Query: 255 MYA-------------------------------KNGCLYEAKKIFDELPTRDIVSWTIM 314
            YA                               + G L  A+  FD++P RD +SWTIM
Sbjct: 284 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 343

Query: 315 ITGLMQSDNPKESLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGI 374
           I G +++    ESLE+F  M++ G+ PD   + SVL+ACA LG+L+ G W+  YI++  I
Sbjct: 344 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKI 403

Query: 375 KWDIHIGTAIVDMYAKCGCIEMALQIFYNMPQRNTFTWNALLCGLAMHGLAHEALNLFEV 434
           K D+ +G A++DMY KCGC E A ++F++M QR+ FTW A++ GLA +G   EA+ +F  
Sbjct: 404 KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQ 463

Query: 435 MIISGVKPNEVTFLAIMTACCHSGMVDEGRKYFNNMSGQLYNLLPKLEHYGCMIDLFCRA 494
           M    ++P+++T+L +++AC HSGMVD+ RK+F  M    + + P L HYGCM+D+  RA
Sbjct: 464 MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD-HRIEPSLVHYGCMVDMLGRA 523

Query: 495 GLLEEAVELARTMPMKPDVLIWGVLLNACRTVGNVELSHHIQDYILELDPEDSGVFVLLS 554
           GL++EA E+ R MPM P+ ++WG LL A R   +  ++      ILEL+P++  V+ LL 
Sbjct: 524 GLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLC 583

Query: 555 NISATNERWSDVIRLRRLMKDRGVNKAPGSSVIEVYGKAHEFVVGDISHLQTEEIFQVL 574
           NI A  +RW D+  +RR + D  + K PG S+IEV G AHEFV GD SHLQ+EEI+  L
Sbjct: 584 NIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 637

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SZK14.4e-17354.10Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX... [more]
Q9SJZ31.4e-12339.08Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
Q9LN016.2e-11937.40Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O233377.6e-11737.32Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... [more]
Q9LSB84.2e-11537.73Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... [more]
Match NameE-valueIdentityDescription
A0A0A0LF190.0e+0090.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004700 PE=4 SV=1[more]
A0A5D3CGR60.0e+0090.21Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C7P60.0e+0090.21pentatricopeptide repeat-containing protein At4g38010 isoform X1 OS=Cucumis melo... [more]
A0A5A7V3V40.0e+0089.86Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1HYD91.7e-30887.24pentatricopeptide repeat-containing protein At4g38010 isoform X1 OS=Cucurbita ma... [more]
Match NameE-valueIdentityDescription
XP_038889932.10.0e+0090.72pentatricopeptide repeat-containing protein At4g38010 [Benincasa hispida] >XP_03... [more]
XP_031736963.10.0e+0090.21pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cucumis sativu... [more]
TYK10715.10.0e+0090.21pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_008458315.10.0e+0090.21PREDICTED: pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cuc... [more]
KAA0061557.10.0e+0089.86pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT4G38010.13.1e-17454.10Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT2G22410.11.0e-12439.08SLOW GROWTH 1 [more]
AT1G08070.14.4e-12037.40Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G14820.15.4e-11837.32Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G15930.13.0e-11637.73Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 241..266
e-value: 3.0E-4
score: 20.8
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 443..467
e-value: 1.0E-5
score: 25.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 142..171
e-value: 0.0016
score: 16.4
coord: 172..197
e-value: 1.4E-6
score: 26.1
coord: 73..104
e-value: 9.9E-6
score: 23.4
coord: 405..431
e-value: 4.1E-4
score: 18.3
coord: 370..404
e-value: 1.8E-6
score: 25.7
coord: 241..269
e-value: 0.002
score: 16.2
coord: 269..303
e-value: 1.4E-6
score: 26.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 267..314
e-value: 2.8E-7
score: 30.6
coord: 169..215
e-value: 4.6E-8
score: 33.1
coord: 367..416
e-value: 1.4E-11
score: 44.4
coord: 73..116
e-value: 1.4E-7
score: 31.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 403..433
score: 8.70333
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 170..200
score: 10.599635
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 368..402
score: 11.772493
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 69..103
score: 9.689847
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 267..301
score: 11.355965
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 229..320
e-value: 4.6E-23
score: 83.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 7..114
e-value: 3.9E-8
score: 35.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 436..568
e-value: 9.3E-11
score: 43.7
coord: 321..435
e-value: 5.6E-29
score: 103.5
coord: 115..228
e-value: 4.4E-21
score: 77.6
NoneNo IPR availablePANTHERPTHR47928:SF62OS04G0488200 PROTEINcoord: 188..253
coord: 2..188
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 188..253
coord: 2..188
coord: 251..578
NoneNo IPR availablePANTHERPTHR47928:SF62OS04G0488200 PROTEINcoord: 251..578

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G012730.1Lsi05G012730.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding