Lsi05G011410 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGGTGAAAATAAAGAACCAATGGTTCCTTAGTTTTTATATACTGATGATCTAAAAATTTGTGCTCGGAGTGGGATTTGATCTAACTTTTTTCATTTTTGTTTTTCTAACCTTTTGTTAATGTTAGTTAACTTTTTTTTTCAATTTTTTTTCTTCTTCCCCCTTTTTTTTCTCTCGCTCCTATTGCATGTAGATTTGTTGCATTATGTACATCTAGGCGTTCTCATTACTCGTTGTTGCTTACTTTCTCGCTCCCTTTGTAATCAGCCAAATCTCAATTTGGCTTGCACAAACTAACTACTAACAAATATTCTAGGTCACGTTTACTAAATCATAATGAAAATTGGTATAATCATAATAGAATTTTATTGATGGATTAATTGTAATGAGCCTGAATTGCAAATGTAATTTGATTGTTTTTTTACCGCGTTTACTTAGAATTATGAATTTTGTTACATTTACCGTTATCGTTACCTTTACCTTTGAGGGTCAAACGATAACAGTAAGGATATCAAAATTCTTAATTTATCATTTAGAACGGTAACGGTAATGATTCAGTGTAATTTTCAAATGCTATTGGTTTGAGTATTCGTCAATTAATTTATATTTTTTATTATGAGGGTCAACTTTTTACATTATCATTAATTTATTACGTTTATACAGGTAAATGTGGCTCTAGTTCATCAACGTTATCATTAAATTATTGAACCTCATATCTAATTATTACAATCATGTATGGCTAAGTATTATTTACCTTTCATCGTAAATGAGATTACGAAAATTTAGCGAAAAATTCACGTCCACATTCAATGACACCAAGTCCAGGGCGATGGAACCTCACAAGTCATGGTAGAGTCATCTGAAGCTTCCCCTGTTTCTCATCTCTGTAGGTCAAGCATGAGTACATCACTTATCATCAGTCAATCTAACCGTTCTGTAAATTATTTTCTCACTGGACCAATAATCGCAGAGTTTCTATCATCATCAAAGAATTCCCGATTGATGGTCGAAGAAATTCTGTCACTTGTTCGAATTCTTTGTTACCTCAGCGTATTCCCCAAACCCCATTGTTTATTTCATTCCGTGGATTCTTTCTTCTTTTCTCCCCCCAATAACTCCCTCATCTTCATCTTCACAGTGTTCTGATTCCTCCTGTTTGATTCCCAGCTCTGATTAGACCCATTTCGTCACAATGAAGCATAAGAAGGATTAGACTCCAATCGGGGTCGACCCAATTTACAGCATGAGCAATCGCCTTGACGCCAAAGACAGTCCCTATGTTCAGTATTCCTCTGCTTCCGCATCTTCAAATGGGAAATGTTTGCTTTCTTCTGTTCTGCACTTAAGGTGTTTGTAAAAATTCCTCTGTGGATGCTGATACTTTTTTTTTGCATATGTCCAACAGATAAGATGTGGGAAGTGTTGAATCGGTGTGAGAAGAGGTTTGAAGATTGTTCTAAGATGGTAGAGGCTGCAGCAGATGGCGTCTGGAATCAATGTTAGTTCTTTCCTGAATGTGTTGTTTTCACCAAGAATTCTAATTAGAAACTCATTGCTGCTTCATTTTGATGCTGAAATAAGTTCAGTTCTCTCTATCTCTCTAATATGATTGGTCGAGTTTTAATGAATTGGTTTCAGGTTTGTCATGATTTATCATTGATTCTAAATAATCAGTGATATTTAGTAATTTAATTGGTAGAGCTTTCAATTATTGGTTTCAAACGATTAAAACTGTTTCTTTCTGTACAGAAATGGTTTCAAGTTTCCCTTTAAGGTGACATTGATCCAAACAATCAATAAGAAATGGTTTCAAGTTTCCCTTTAAGGTGACATTGATCCAAACAATCAATAATAACTTCCATTAACAAATGACATGTTAAAAGTTAAAACTGAACCAACTTTTCTTGGCAAGGATTTGCTTTGTTCCTTTTGGTCCCTTTCTAGAATTATGAAATTTGGACCCTGGATTTGTATACCTGTTTGATGTCCTCTTTAGCTTATTAGCGTTTAACCTGCACTGCAATATTTGCTTTTCCCAACAGTGAAACTTAGTTCTAGTGTCACTGATGCGGCCATGGCCAGGCTTCATCAAGGGACAAAGTTACTTACAGAAGGTGGCTATAACAAAGTATTCCAACAGACGTTTGGTTTCGTTGATGCAGACAAATACTTGGATTCCTTTGCTTGTTATCTGTCCACTTCCTCTGGGCCTGTGAATGGGACTCTGTACATATCCACAAAAAGAGTGGCCTTTTGTAGTGAGTTTCCTCTTTGTTACTATCCATCTCCTGGCCAACCACAGTGGATCCTTTACAAGGTACGTCTGGCCCATTGTTCTTGAAGATATTTTGATCTGATGGATCTGAAATAGGACTTTAGGATACAAAACTTAGCTGTTTACTGATAAGTAGTTCATTGAGTTTATTTAAGGCGAGTTTGAAAACAATTTGGTTTTGGGTTCCTAGTTTTTTAAAATTAAGCTTGTAAACACTTCTTCAACGTATGGAGTTTCTTTGTTTACTATCTACTTCTTAACCATGTTTTCAAAATCCATGTCAAGTTTTGAAGACTAAAAAAAGTAGGCCCAGCTTAATAATCATTTTGTTTTTGAAGTATATACGAGTTTTCTCAAAATTTATTGGTAAGTTTTTCACCTACTAAAAAATACATGTGAATTCTAAGTCAAATTTCATGAATAAAATCATGTTCTCAAAAACTACATTTTTTTAATTTTCAAAATTTGACTTGGCTTTTGAGAACAGTAGGTAATAAAGCAAAAAAACTTATAGGTAAAACAAAAACAAAACGGTTGTCAAACGGGGCGTACTTTTAAAATCACGTCTTCGTTTTATGAATTTAGCTAAAACAAGCACAATTTTTAAAAATTAAAACTTGATTGAACAGGGCCTTAGAGGATGGATAAAAGACTTCTCATATGTTTGATGAGAGGTCTGAGACACTTCATAAAAGATTATACTGGCTTAACTCTCTCTGTTAACGTCACTACTCACATATACTTCTCTTATCTAACACGTGGTGAGGGCCCTGCTGCCTTCACTCTCAAAGATACTCCTATTACAGTTACAGATTACCAATTTCTCTCTCCCTCTAACTTCCATTTGTATTTCCCACCCTTTCTTCTTTGAACACGTGATATGCATACATGGCTTCTTGAGTGTAAGAAAAATTTCTAGCGTTCGTTGTTGGTTTAAATCCTATTTTGGTCCCTGAACTTTGAATCATGTTCTACTTTGGTCCCTAAACTTTCAAAAAGGCCCATTTTAGTCTCTGAACTTTTAAAAATTGTTTATTTTGGTCCCTGCTGTTAATATTCTTTAACAGACTACTTTTCATGGCTATTGTGTAACTTAGGAAATGAAGAATTTCTCTCAAAGTGTCATCAACATTTTTATTTTCTCTGTTTTTTCTTTTCATCCGCCCATTTTTCATGTAACTATATCAAGTTTCCTTTTTTACAATCATTTCGTAAGAAAAGAAGTTAACGTATTGTTCAAAATCTTGAATGACTAAAATTGATTTACCCTCTAATTCAAAATTGAAACCCTAGATTTTTTTAGGGTGGCTAACTTATTTGGTAGCCTTGTCATCCAAAAAATCACCCTTCTATTAAATCTTAACAAGGACCAAGGTACGCACTTTTCAAAAGTTCAGGGGCTAAAACGGACATTTTTGAAAGTTTAGAAACCAAAATGGAACAAGATTCAAAGTTCAGGGACCAAAATAGGATTTAAACCATTCATTGTTTGTCATAAAAGAAGCATTGAAGAATGGTGTGGAATCCATAAAATCAAATTCATATATCATTTAATGATGTCTTAAAAGTTGAATGGAAGGAGTATGTACTACTAGGTGGCTACACTACTATTATTTTTTCCCTCAAATGCAGATCCTGCTTTTTTCTCTTAGTTTACAATGAAGAGATAAGAAAAAGAAGAAGAGATAGTTATTAATTGATTGCTAGCCAAGTTTTCTATAAAATTATTCTCTAAACTTGCTTTACTATGATTATGTTTAATGTTTTTTTGGAATTTAAAGCATGGGGGCACTGCAGTTTGGGAAATAACTATATGAAGTATTGCAATAGTTTGATTTTTGACCCCAGTGAATCACAATTTCACTCGGTTTCTCCTGTGAAATTCTATATAAAAAAATTTCCATTTCTTTTCCTTATTGTGATAGAAAATAATTGAAGTTCAAATTCATTAGAATAAAATTTATATGACATAAGATAATAGAAGTATCTAGTCTTATAGTATAGTTCATAATCTCTCAATGGAGTAAAATAGTCGACTCTCATTCACTGTTTGATGAGAGGATAGTGTATTGGGGACTAGAATTTAATACCATTTAATATACCCATTAAATAGCCTAACATAATTACCCTTTCTTTGTTACCCACTGTGAATTAATTATTAAATTGGGCACCATGGGATCACTAGCAATGGGTGGAGGAACTGGAAATGTAAGAATGCAGGGTCTGATCTTCCTGTAGGATACCATTGATGGATTGTCAGTCCACAGAGACTATAAGCTGTTGTGCAAGAACCTGTTTCTGGTTTGAAGAATAATAAATGAAACCATTTAGAGAGTGAAAGAAGAGTCTGCAGCTTTATAAAGCTCTTTCTTGGACATCCATCAATTAATACATCCAGAATAGACCCCCCTCCCCCCCCCCCAAAGGAATTTTAGCAAGGCCAAGGAGACTCTCTCTCCCTCTCTCTGCAATTTGTCTAATGACATCTCTTGATGATTATTGAAAAGTAAGTTTAGTGAAATGTGTTCTTGCTAGTTCGGTCCCGTTATTGCACGTCGGTACATAAAACTAACTCAGAATTTATAAAACTATGCTAAAGACAATGTTGGCAGTCCAATCTCCTATCTCCTTTCTGTGTGTTTCCATGAAGTATAGTTTAGTGGGCTTGTGTTACTACTTGATCTTGCATTTTATCCCCTTCTCAAATGATTGATATTTGAGTAGAATCAACTGGAATGATTAGCAAAACGAATCGCCGAGTTTCGTTGAGTTTCTTTGTCCCTTTATCTATCTTTTTTGCCTGAGTTTTCAATGATGGATCTTCTGTTAATGTCTTTAGTTGGATTCTTTTTCATGACTATGATGAATATGTATGTAGGTGGTGATAGCGGTTGATCAGTTGGGAAAAATCAATGCTTCTTCAAACCTTATGGACCCCTCACAAAAGTACATCCAAGTAATCACGAGGGACTCTCATGAATTCTGGTTCATGGGATTCATATCATATAACAAGGCTGTCAAGACTTTAACTGATGCATTGCAGCGATCCCGTGCCTAGGTCGAACTCGGAGGATACCAAAATGCATCTGTTCCCTCTCGCAATCTCGTACCTACCTAAATCAACACTTCCTTCTATACACTTCACATATATTTTTCTATTTTAGTCAAATGAGATAACCGATAATAATCATTAGATGTGGATTCTAAAATATGCATGTCCCCTGATAACTACGAGACACATATTCAAGGCTCTCTTAGTGCTGTTTCTCTCGTACATTTAATGATGCAAAACTGTCAGTCACATGTGACGGCCGCTGATAAGAAGATTCTCTTATTTTTGTAAATAGTTTTATAAAATAAAGTTGTTTGTATCATACACTTGTGAAATCTAAGCAACCCATGCTTTGACTAGGATTATTATTGATTACTTTACCGCAGGTTGTGCAGAAATTCTAGTGGAGGTCTTTATG ATGCTGACTCCAATCGGGGTCGACCCAATTTACAGCATGAGCAATCGCCTTGACGCCAAAGACAGTCCCTATGTTCAGTATTCCTCTGCTTCCGCATCTTCAAATGGGAAATATAAGATGTGGGAAGTGTTGAATCGGTGTGAGAAGAGTGTCACTGATGCGGCCATGGCCAGGCTTCATCAAGGGACAAAGTTACTTACAGAAGGTGGCTATAACAAAGTATTCCAACAGACGTTTGGTTTCGTTGATGCAGACAAATACTTGGATTCCTTTGCTTGTTATCTGTCCACTTCCTCTGGGCCTGTGAATGGGACTCTGTACATATCCACAAAAAGAGTGGCCTTTTGTAGTGAGTTTCCTCTTTGTTACTATCCATCTCCTGGCCAACCACAGTGGATCCTTTACAAGGTGGTGATAGCGGTTGATCAGTTGGGAAAAATCAATGCTTCTTCAAACCTTATGGACCCCTCACAAAAGTACATCCAAGTAATCACGAGGGACTCTCATGAATTCTGGTTCATGGGATTCATATCATATAACAAGGCTGTCAAGACTTTAACTGATGCATTGCAGCGATCCCGTGCCTAGGTCGAACTCGGAGGATACCAAAATGCATCTGTTCCCTCTCGCAATCTCGTACCTACCTAAATCAACACTTCCTTCTATACACTTCACATATATTTTTCTATTTTAGTCAAATGAGATAACCGATAATAATCATTAGATGTGGATTCTAAAATATGCATGTCCCCTGATAACTACGAGACACATATTCAAGGCTCTCTTAGTGCTGTTTCTCTCGTACATTTAATGATGCAAAACTGTCAGTCACATGTGACGGCCGCTGATAAGAAGATTCTCTTATTTTTGTAAATAGTTTTATAAAATAAAGTTGTTTGTATCATACACTTGTGAAATCTAAGCAACCCATGCTTTGACTAGGATTATTATTGATTACTTTACCGCAGGTTGTGCAGAAATTCTAGTGGAGGTCTTTATG ATGCTGACTCCAATCGGGGTCGACCCAATTTACAGCATGAGCAATCGCCTTGACGCCAAAGACAGTCCCTATGTTCAGTATTCCTCTGCTTCCGCATCTTCAAATGGGAAATATAAGATGTGGGAAGTGTTGAATCGGTGTGAGAAGAGTGTCACTGATGCGGCCATGGCCAGGCTTCATCAAGGGACAAAGTTACTTACAGAAGGTGGCTATAACAAAGTATTCCAACAGACGTTTGGTTTCGTTGATGCAGACAAATACTTGGATTCCTTTGCTTGTTATCTGTCCACTTCCTCTGGGCCTGTGAATGGGACTCTGTACATATCCACAAAAAGAGTGGCCTTTTGTAGTGAGTTTCCTCTTTGTTACTATCCATCTCCTGGCCAACCACAGTGGATCCTTTACAAGGTGGTGATAGCGGTTGATCAGTTGGGAAAAATCAATGCTTCTTCAAACCTTATGGACCCCTCACAAAAGTACATCCAAGTAATCACGAGGGACTCTCATGAATTCTGGTTCATGGGATTCATATCATATAACAAGGCTGTCAAGACTTTAACTGATGCATTGCAGCGATCCCGTGCCTAG MLTPIGVDPIYSMSNRLDAKDSPYVQYSSASASSNGKYKMWEVLNRCEKSVTDAAMARLHQGTKLLTEGGYNKVFQQTFGFVDADKYLDSFACYLSTSSGPVNGTLYISTKRVAFCSEFPLCYYPSPGQPQWILYKVVIAVDQLGKINASSNLMDPSQKYIQVITRDSHEFWFMGFISYNKAVKTLTDALQRSRA Homology
BLAST of Lsi05G011410 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 7.2e-40 Identity = 87/201 (43.28%), Postives = 125/201 (62.19%), Query Frame = 0
BLAST of Lsi05G011410 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 9.4e-40 Identity = 79/151 (52.32%), Postives = 111/151 (73.51%), Query Frame = 0
BLAST of Lsi05G011410 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.0e-38 Identity = 84/190 (44.21%), Postives = 123/190 (64.74%), Query Frame = 0
BLAST of Lsi05G011410 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2) HSP 1 Score: 139.8 bits (351), Expect = 3.2e-32 Identity = 69/138 (50.00%), Postives = 93/138 (67.39%), Query Frame = 0
BLAST of Lsi05G011410 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.7e-28 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 0
BLAST of Lsi05G011410 vs. ExPASy TrEMBL
Match: A0A1S3CCD7 (GEM-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 5.0e-84 Identity = 161/213 (75.59%), Postives = 174/213 (81.69%), Query Frame = 0
BLAST of Lsi05G011410 vs. ExPASy TrEMBL
Match: A0A6J1E018 (GEM-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111026148 PE=3 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83 Identity = 159/207 (76.81%), Postives = 168/207 (81.16%), Query Frame = 0
BLAST of Lsi05G011410 vs. ExPASy TrEMBL
Match: A0A1S3CCH4 (GEM-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 3.1e-78 Identity = 160/243 (65.84%), Postives = 173/243 (71.19%), Query Frame = 0
BLAST of Lsi05G011410 vs. ExPASy TrEMBL
Match: A0A1S3CCV4 (GEM-like protein 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 3.6e-74 Identity = 143/182 (78.57%), Postives = 149/182 (81.87%), Query Frame = 0
BLAST of Lsi05G011410 vs. ExPASy TrEMBL
Match: E2CXH9 (GRAM domain-containing protein (Fragment) OS=Jatropha curcas OX=180498 PE=2 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 7.7e-53 Identity = 109/216 (50.46%), Postives = 146/216 (67.59%), Query Frame = 0
BLAST of Lsi05G011410 vs. NCBI nr
Match: XP_038887655.1 (GEM-like protein 2 isoform X2 [Benincasa hispida]) HSP 1 Score: 331.6 bits (849), Expect = 4.4e-87 Identity = 167/207 (80.68%), Postives = 172/207 (83.09%), Query Frame = 0
BLAST of Lsi05G011410 vs. NCBI nr
Match: XP_038887653.1 (GEM-like protein 2 isoform X1 [Benincasa hispida] >XP_038887654.1 GEM-like protein 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 323.6 bits (828), Expect = 1.2e-84 Identity = 166/208 (79.81%), Postives = 171/208 (82.21%), Query Frame = 0
BLAST of Lsi05G011410 vs. NCBI nr
Match: XP_008460398.1 (PREDICTED: GEM-like protein 2 isoform X2 [Cucumis melo]) HSP 1 Score: 320.5 bits (820), Expect = 1.0e-83 Identity = 161/213 (75.59%), Postives = 174/213 (81.69%), Query Frame = 0
BLAST of Lsi05G011410 vs. NCBI nr
Match: XP_022159858.1 (GEM-like protein 2 [Momordica charantia]) HSP 1 Score: 318.5 bits (815), Expect = 3.9e-83 Identity = 159/207 (76.81%), Postives = 168/207 (81.16%), Query Frame = 0
BLAST of Lsi05G011410 vs. NCBI nr
Match: XP_008460396.1 (PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo] >XP_008460397.1 PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo]) HSP 1 Score: 301.2 bits (770), Expect = 6.4e-78 Identity = 160/243 (65.84%), Postives = 173/243 (71.19%), Query Frame = 0
BLAST of Lsi05G011410 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein ) HSP 1 Score: 167.2 bits (422), Expect = 1.3e-41 Identity = 87/196 (44.39%), Postives = 125/196 (63.78%), Query Frame = 0
BLAST of Lsi05G011410 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 165.2 bits (417), Expect = 5.1e-41 Identity = 87/201 (43.28%), Postives = 125/201 (62.19%), Query Frame = 0
BLAST of Lsi05G011410 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein ) HSP 1 Score: 164.9 bits (416), Expect = 6.7e-41 Identity = 79/151 (52.32%), Postives = 111/151 (73.51%), Query Frame = 0
BLAST of Lsi05G011410 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 ) HSP 1 Score: 159.8 bits (403), Expect = 2.2e-39 Identity = 84/190 (44.21%), Postives = 123/190 (64.74%), Query Frame = 0
BLAST of Lsi05G011410 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein ) HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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