Lsi05G011090 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAATTTTGAGAGAAAAAAAAGAGAAGAAAAGTAGCGTGGCATTTCCGTTATTTTCGATGAGATCAAAGGGTAGCTACAACTAACTCAAGAGAACACAGACATGCCAACTTTTCGAGCTTCCCCTTGAAGCAAAGCCTTCATTTTCTCTCCATTTTTTCCCTTTCTCTCTTTCTAATTCTCCTCCGGTTCGAATTAGGGCAAAGATTCATCGTCTTCCATGGGGCAACAATCCTTGATCTACAGCTTCGTTGCGCGTGGGACTGTAATTCTCGCGGAGTATACGGAATTCACCGGCAATTTCACCAGTATAGCCTCCCAGTGCCTCCAGAAGCTTCCCGCCACCAATAACAAGTTCACTTACAATTGCGATGGCCACACCTTCAACTATCTCGTCGATAATGGATTCAGTAACTTTCTCTGTCTCCTCTTTTTTTTTTTTTTTTTTTTTTCATCGATTCCATCTCTTTTTTCTACGGTTTTCATGGCGTTCGTCTTTTGATCGATTGTTTTATATCTATACAACTGTTATGCATGTATATTATGCGATTCTTTCTGATTCTCCTGTTTAGTTTTTAACGTGCTTCCGTATTGATATTTGCGTCAGATGCGATTCTTAACGCGTTGTTATCTTCCAGTGGAAATAATAGGAAACTAGAATCATAAGCATCGTTTTGTGATACGCTGATGAGATAACTAATGGAGGATTTGGTTCTATAAATATCATTCTATTTTGAAAGATATTACGTATTGAAATGAACGATCGTTAAAATTCCTTGGTAGATTCTTGAACGAGTCCTTTAATTATGCCACAGCTCGAATTTATTCCACATCGCTATCGTTTTAGAAACCGTTTTCTTGGAGATTTATTTCGCTTTTGTCTTTTTGAGGTTGTTTTCTGAGTTCGTCAATGCGAGAGAACTGTTGCAGATGTGGTACCCGAAACTGTCATTCTTCGTATCAATATTTCTGGAGCCTTGAAACTGCCGCCTCCTCTGTTTATGATGACAACAAATTCTTTTATACTAATTTCAGTTTTGATGTTCTTTTCTCTAATCGCATTTCTGTAAAATTAGCATTCTCCTGTTTTGTTAATCATCCCCTTTCCTCGTTCTGTAAGTTAATGTTTCAGTTCTTTGATTGAAGATTGTGTTGTCCTGAGGATGTTTCTCATCTCAGTTCATGTACATGGTTCCTGAGTGTGTTTCATCATTGTCATTAATTACTATTTCAGTTTAAGGTCCAGTCAAGAAATTCACCTTCAATTCAGACTAATGGAGAAAATAATTGAGAACCAAGATTATCTAGATATGGAAAAACATACAATGCAATGAAGCTGTACTATTTAATCTATAAAGCATATACATGTGTGCTTCCACGAGAAAGACCATACTTAAAACTCTTGAACGACTGGATGTGGATCCTAAAGATCTGTGTTTGCTTGTGCTCCATACAGACTCTATGCTTACATAAGTAAATCTAATTGATTCCATCTCTTCCACATCGCAGCTTACTGTGTGGTTGCAGTTGAGGCTGCTGGCCGACAGATCCCTATTGCATTCCTTGAACGAGTTAATGAGGACTTTGTGAAGAGATATGGAGGTGGAAAGGCCATGACAGCAACTGCCAACAGCCTGAACAAAGAATTTGGGTACATTGTTTCATGGGAATTATTAAATGAATGCCACATTATCTCTTATCTAACATTATATATAAAGAATGAATGTGCCATTACCTGGATTTTGATTCCAACAACATTATATTTTTAAATAGGTCTAAACTGAAGGAGCATATGAAGTATTGTGTGGAGCACCCAGAGGAGATCAGTAAGCTTGCCAAAGTGAAAGCACAGGTTTCTGAAGTCAAAGGAGTAATGATGGAAAACATTGAGAAGGTAAAAGAAATCTTTGCTATCTACTGCTTGCTACCTACAGCCATTACATTCCGCCTTGCCTTTCAATCTTAAAATTTAGGAAAAGGCCAAATTCTGGTTATTATAACATTTGATCTAATTTAATCTTTTATTGTATTTTACTGGATATGCAAATGTTGTGTTTATTCACTAATTGTTCTCTCAACAGGTTCTTGATCGTGGAGAGAAGATTGAGCTTCTAGTGGATAAGACAGAAAACCTTCGATCTCAGGTCATTGCCAGATTCTTTTGCATGACTAACTAAATTATGATTGGCAATCTGAGAAATGATACATTCTCTATAATGAACAAGTATAGATGCTATATGAATTAGAGGGAATTTAGTTCATGAATGAATGGCATTCATATTTGTTTGCAATACTTTCCTACTTATGGATAAATTGAAGTTGTTACTAAGTTATATACCTTAAGAAAAAGGGGATTGCATTCAAAACTTGCGAGTGAGCACGAGCAGCAACATCATAGAGCGTGTCTGTGCTATATGCTTCCAATTATTTAGCTTATTCGTGTCATAGTCTCATGTTAGACGTAGCACTATGCTTAGTTCTGTGATTCCAATGGATTATTGGCCTTGTGAGGTTTAGAACAATCCCAAGTAACTTGAATAAGGAGAAAATTGTAATAAAAAGAAAACAGGAGACTATGTTTACAAAAGAGGAAATACACAATTTTTTTTTACTGTGAATACAAAATTTAATTGAAAATGGTATCTGCAGGCACAAGATTTTAGGCAGCAAGGAACCAAAATGAGGAGAAAGATGTGGTATCAGAACATGAAGATGAAGCTGATAGTTCTTGCGATCGTACTCGCGTTGATTCTGATTATCATTTTGTCTGTCTGCGGCGGCTTCAATTGTTGATGGATTATTCTCTGCAGCATTAGGATTTTGGTGATGGGATCAGTCTTACTCGGACAGTTTTATACATGCTTGTTTATTGTACAAATCTTTCAGTTCCAAGTTCAACTTACCCATACGTTACCTAAGGACTCTGCTTTTGTATAGGTTGTGCGGTTATATTCTTTTGACATTTTGTATGGAAATATATCATTCGTTTGCTAAATAATAAATACGCTTGGATATCAA ATAATTTTGAGAGAAAAAAAAGAGAAGAAAAGTAGCGTGGCATTTCCGTTATTTTCGATGAGATCAAAGGGTAGCTACAACTAACTCAAGAGAACACAGACATGCCAACTTTTCGAGCTTCCCCTTGAAGCAAAGCCTTCATTTTCTCTCCATTTTTTCCCTTTCTCTCTTTCTAATTCTCCTCCGGTTCGAATTAGGGCAAAGATTCATCGTCTTCCATGGGGCAACAATCCTTGATCTACAGCTTCGTTGCGCGTGGGACTGTAATTCTCGCGGAGTATACGGAATTCACCGGCAATTTCACCAGTATAGCCTCCCAGTGCCTCCAGAAGCTTCCCGCCACCAATAACAAGTTCACTTACAATTGCGATGGCCACACCTTCAACTATCTCGTCGATAATGGATTCACTTACTGTGTGGTTGCAGTTGAGGCTGCTGGCCGACAGATCCCTATTGCATTCCTTGAACGAGTTAATGAGGACTTTGTGAAGAGATATGGAGGTGGAAAGGCCATGACAGCAACTGCCAACAGCCTGAACAAAGAATTTGGGTCTAAACTGAAGGAGCATATGAAGTATTGTGTGGAGCACCCAGAGGAGATCAGTAAGCTTGCCAAAGTGAAAGCACAGGTTTCTGAAGTCAAAGGAGTAATGATGGAAAACATTGAGAAGGTTCTTGATCGTGGAGAGAAGATTGAGCTTCTAGTGGATAAGACAGAAAACCTTCGATCTCAGGCACAAGATTTTAGGCAGCAAGGAACCAAAATGAGGAGAAAGATGTGGTATCAGAACATGAAGATGAAGCTGATAGTTCTTGCGATCGTACTCGCGTTGATTCTGATTATCATTTTGTCTGTCTGCGGCGGCTTCAATTGTTGATGGATTATTCTCTGCAGCATTAGGATTTTGGTGATGGGATCAGTCTTACTCGGACAGTTTTATACATGCTTGTTTATTGTACAAATCTTTCAGTTCCAAGTTCAACTTACCCATACGTTACCTAAGGACTCTGCTTTTGTATAGGTTGTGCGGTTATATTCTTTTGACATTTTGTATGGAAATATATCATTCGTTTGCTAAATAATAAATACGCTTGGATATCAA ATGGGGCAACAATCCTTGATCTACAGCTTCGTTGCGCGTGGGACTGTAATTCTCGCGGAGTATACGGAATTCACCGGCAATTTCACCAGTATAGCCTCCCAGTGCCTCCAGAAGCTTCCCGCCACCAATAACAAGTTCACTTACAATTGCGATGGCCACACCTTCAACTATCTCGTCGATAATGGATTCACTTACTGTGTGGTTGCAGTTGAGGCTGCTGGCCGACAGATCCCTATTGCATTCCTTGAACGAGTTAATGAGGACTTTGTGAAGAGATATGGAGGTGGAAAGGCCATGACAGCAACTGCCAACAGCCTGAACAAAGAATTTGGGTCTAAACTGAAGGAGCATATGAAGTATTGTGTGGAGCACCCAGAGGAGATCAGTAAGCTTGCCAAAGTGAAAGCACAGGTTTCTGAAGTCAAAGGAGTAATGATGGAAAACATTGAGAAGGTTCTTGATCGTGGAGAGAAGATTGAGCTTCTAGTGGATAAGACAGAAAACCTTCGATCTCAGGCACAAGATTTTAGGCAGCAAGGAACCAAAATGAGGAGAAAGATGTGGTATCAGAACATGAAGATGAAGCTGATAGTTCTTGCGATCGTACTCGCGTTGATTCTGATTATCATTTTGTCTGTCTGCGGCGGCTTCAATTGTTGA MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVDNGFTYCVVAVEAAGRQIPIAFLERVNEDFVKRYGGGKAMTATANSLNKEFGSKLKEHMKYCVEHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWYQNMKMKLIVLAIVLALILIIILSVCGGFNC Homology
BLAST of Lsi05G011090 vs. ExPASy Swiss-Prot
Match: P47192 (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana OX=3702 GN=VAMP722 PE=2 SV=2) HSP 1 Score: 384.4 bits (986), Expect = 8.5e-106 Identity = 192/219 (87.67%), Postives = 211/219 (96.35%), Query Frame = 0
BLAST of Lsi05G011090 vs. ExPASy Swiss-Prot
Match: O48850 (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana OX=3702 GN=VAMP725 PE=2 SV=2) HSP 1 Score: 379.0 bits (972), Expect = 3.6e-104 Identity = 188/219 (85.84%), Postives = 208/219 (94.98%), Query Frame = 0
BLAST of Lsi05G011090 vs. ExPASy Swiss-Prot
Match: Q9MAS5 (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana OX=3702 GN=VAMP726 PE=2 SV=2) HSP 1 Score: 377.9 bits (969), Expect = 8.0e-104 Identity = 188/219 (85.84%), Postives = 206/219 (94.06%), Query Frame = 0
BLAST of Lsi05G011090 vs. ExPASy Swiss-Prot
Match: Q9ZTW3 (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana OX=3702 GN=VAMP721 PE=2 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 4.4e-102 Identity = 187/219 (85.39%), Postives = 207/219 (94.52%), Query Frame = 0
BLAST of Lsi05G011090 vs. ExPASy Swiss-Prot
Match: O23429 (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana OX=3702 GN=VAMP724 PE=2 SV=2) HSP 1 Score: 313.5 bits (802), Expect = 1.8e-84 Identity = 156/220 (70.91%), Postives = 189/220 (85.91%), Query Frame = 0
BLAST of Lsi05G011090 vs. ExPASy TrEMBL
Match: A0A0A0L8R7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G625650 PE=3 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114 Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0
BLAST of Lsi05G011090 vs. ExPASy TrEMBL
Match: A0A1S3CN35 (vesicle-associated membrane protein 722-like OS=Cucumis melo OX=3656 GN=LOC103502784 PE=3 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 4.0e-114 Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0
BLAST of Lsi05G011090 vs. ExPASy TrEMBL
Match: A0A6J1HI28 (vesicle-associated membrane protein 722-like OS=Cucurbita moschata OX=3662 GN=LOC111463791 PE=3 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 2.6e-113 Identity = 212/219 (96.80%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of Lsi05G011090 vs. ExPASy TrEMBL
Match: A0A6J1HWF2 (vesicle-associated membrane protein 722-like OS=Cucurbita maxima OX=3661 GN=LOC111466884 PE=3 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112 Identity = 211/219 (96.35%), Postives = 218/219 (99.54%), Query Frame = 0
BLAST of Lsi05G011090 vs. ExPASy TrEMBL
Match: A0A6J1K628 (vesicle-associated membrane protein 722-like OS=Cucurbita maxima OX=3661 GN=LOC111491496 PE=3 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 2.8e-112 Identity = 213/219 (97.26%), Postives = 217/219 (99.09%), Query Frame = 0
BLAST of Lsi05G011090 vs. NCBI nr
Match: XP_038886944.1 (vesicle-associated membrane protein 722-like [Benincasa hispida]) HSP 1 Score: 421.4 bits (1082), Expect = 4.8e-114 Identity = 217/219 (99.09%), Postives = 218/219 (99.54%), Query Frame = 0
BLAST of Lsi05G011090 vs. NCBI nr
Match: XP_004152023.1 (vesicle-associated membrane protein 722 [Cucumis sativus] >KGN58350.1 hypothetical protein Csa_017562 [Cucumis sativus]) HSP 1 Score: 421.4 bits (1082), Expect = 4.8e-114 Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0
BLAST of Lsi05G011090 vs. NCBI nr
Match: XP_008465086.1 (PREDICTED: vesicle-associated membrane protein 722-like [Cucumis melo]) HSP 1 Score: 420.6 bits (1080), Expect = 8.2e-114 Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0
BLAST of Lsi05G011090 vs. NCBI nr
Match: XP_022963465.1 (vesicle-associated membrane protein 722-like [Cucurbita moschata] >XP_023554031.1 vesicle-associated membrane protein 722-like [Cucurbita pepo subsp. pepo] >KAG6571579.1 putative vesicle-associated membrane protein 726, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 417.9 bits (1073), Expect = 5.3e-113 Identity = 212/219 (96.80%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of Lsi05G011090 vs. NCBI nr
Match: XP_022967329.1 (vesicle-associated membrane protein 722-like [Cucurbita maxima]) HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112 Identity = 211/219 (96.35%), Postives = 218/219 (99.54%), Query Frame = 0
BLAST of Lsi05G011090 vs. TAIR 10
Match: AT2G33120.1 (synaptobrevin-related protein 1 ) HSP 1 Score: 384.4 bits (986), Expect = 6.0e-107 Identity = 192/219 (87.67%), Postives = 211/219 (96.35%), Query Frame = 0
BLAST of Lsi05G011090 vs. TAIR 10
Match: AT2G32670.1 (vesicle-associated membrane protein 725 ) HSP 1 Score: 379.0 bits (972), Expect = 2.5e-105 Identity = 188/219 (85.84%), Postives = 208/219 (94.98%), Query Frame = 0
BLAST of Lsi05G011090 vs. TAIR 10
Match: AT1G04760.1 (vesicle-associated membrane protein 726 ) HSP 1 Score: 377.9 bits (969), Expect = 5.7e-105 Identity = 188/219 (85.84%), Postives = 206/219 (94.06%), Query Frame = 0
BLAST of Lsi05G011090 vs. TAIR 10
Match: AT2G33120.2 (synaptobrevin-related protein 1 ) HSP 1 Score: 375.6 bits (963), Expect = 2.8e-104 Identity = 191/227 (84.14%), Postives = 211/227 (92.95%), Query Frame = 0
BLAST of Lsi05G011090 vs. TAIR 10
Match: AT1G04750.1 (vesicle-associated membrane protein 721 ) HSP 1 Score: 372.1 bits (954), Expect = 3.1e-103 Identity = 187/219 (85.39%), Postives = 207/219 (94.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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