Lsi05G011060 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G011060
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLAGLIDADG_2 domain-containing protein
Locationchr05: 18817183 .. 18830793 (+)
RNA-Seq ExpressionLsi05G011060
SyntenyLsi05G011060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAATTTATCATAAATTCTTTGTCCTTTAAAAATTTTCTTTATAAATGACTCATATTCACATGCCAACTCTTTCTTGTACTCATTGCTTGGTTGTCTTCAGCATCTTCCTTAGATTCTCATTCTCTGTCTTCATTTTCCCCTTCAGTCTTTCACAGTGAAGACAGAGAATCTTCAGCAAAGAGACAGCACAGAACAGATCTCTCTAATAAGTGCTTTTTTTCCATTTTGACTCAAAATTTGTCATTTTTCTTTGACATGTGCGTAACCCCTTTTAAAAAAACCTCACTTTACCAATCATAGTCATGCAGGTAAAGCCTTTCAAAACAGTTTGCTTTATGAAAAGTTCCTTAAAGAAATGTGTGTTTTTTTGTTCTATTAAAAGCTTAATGGGTTTCTGTTGTTTTGATGAATTGTAGCAAGTTCTTCAATGGGTTTTCAAGGAAACAAATGAAAAACAAGGACAGAGGACTTCACAATCCACCAAGAAGGAGACAAGTTGGGGTAAGAGAAACATGCACAGTACCTGTTTGATAAAATGTCAAAGTGGCAACGATTTGTTTTAAGTGTCATGAAACTTTCTTTTTTTTGCCAGATAAAGGAACTGCTGCTAGATCAAAGGAGATAGTGGTGTCTAGTTCATGTGGGAGTTCTCAAAGATCAAAGGGATTTGAAGGAAGGAAATTTGATCTAAAGAAGTTGAAATCATTTGCTTTGTTGTGCAGAAAGGATATTTCAAAGTCTTGCTTTTATAGTACCATTAATATAAAGAGACCAAGAACACAGGGCTTTGATAATATGCACCATTATTGGATCCAAAAGATGAAAAAAGAAGATATTGCTAAGGGAATTAGAGAGATTGGTCAAAAGGCAGATTCTTCTTCTTCTTCTGTTCATGCTGGCACCAAAGTCTTGCCAATAACTGATGCCACTTTAGTAGAGCAATGCAGCAGTAAGACTGAGAAGAAAGTTTTGGCCAATGGAGAGAGTAAAACCAAAACCAAATCAAGAATGAAGGAACTTTTGAGATGGGCTATGACTTCAAGATCAGAAAAAGGAGGGAAGTTCATCACTGGCAAGGTGATTTTCTTAACTTCTTAATAACTTTCCCCTTGTTTGGACATCTGGAAATCCTTTATTTGTACAAGTAATCAACTATGTTTCTATTGGTTTGAATCATTTACTCCTTAAACCACCACATAACTCAATAGCTTAAGCTTATGAGTTCAGGTATATATATACTCTTAATACCATCTTTAAGTATGGGCTTGAGGATTAATTTGACTTGTGGAACCTGAAACATGAATTGTATCAACATCAATCGAGTTAGGACCTCTTGTTTTGATACAATATTAAACTACTTCTAAATCCAAAAAAAAGCTCTTAGGTTGAAATAAATTTTATTTTACCAAATCCATATTGAATGGTGACTGTGATCTGTATCCATATTGAATATGAAAGAAGCCAAAGCATAGGCCCTCGGTGTCAAATCACCATTATAGCTATCAGCATCCTTATTGATGAATAGCTAGCTTATTTTAAGGGTCTATATGGAATGACTTTTTGAGTGCTTAAACTTCTAAACACTTGAAAAGTAATTCCAAACAGTCGAGATATATGTTTCAATGATGCAATAATTTTCAAACTGAATGGCTTAAAATTGTGCAACTTCTTTCAGGTTTCACGAATGAGAAACCGAGGAACTCTTAAAGCAGGTTTGGACGATGATCGAGGGAGTAACGACTCCCCCAAGATTAGTTTCAGATGGGAAGCTGAAAGCTGCTCCTCCATTTCCTCAGCCTACTCGTCGGTGTCGGCGGTGTCCCCATTCAAAAACTGTTCCATCACACTGAATTCCACTGCCATTCATGAAATCAATCAATATTATCCAAGAAGAGGAAGCTGGATCACTACAGATTCTGAATGTAAGATTGTAATCCCCATTTTCACTAGACTGATCACTTATGAAAAATTATTATAGAACAAAAGACATGAGGAACTGACTTAACTTTCCTTCTCTGCCTTGAATGGACAGTTGTTGTGCTAGAGCTTTGAAGGAGAAGGGAAGACAGATGATCTGCAATGGCTTCATCAATGTGGTATCTGCTTGCACTATGTGAATTGTAGATTCTATGCAAAACCAGAGGATTTGTTTGTAAAAATGCTTCAAATATCTATGCAAAACATGTATCTGAAATAACATTTTGATTGTAACTCAAATAATCATCTAACAAGTCTTTGGTGTAAGAGGTTAACTGAGCTTCACATCTGCATTCCCTTTTTGCAATGCGATTCTTTTTTTTACCCGAGTTTTTGGAGGTCGAGATTGAGATAAGAAAAGGCATCTTAGGATATGAAAGAGTTAGAATTGGTTGCTAATGTTTCTGTTTCTTTTTCACTGTCTCTCGTTTCCATTTTTTCAGAACCAAATGTATTTGGTAAATGTTCTTGTCTTTTGGTTTCTCATTTTTTTTAGAAATGTTTTTTAAAAAACCAGTTTCTTGGTTCTAATCTTCCTTTCTTTATTTAGAAAGGAAAATTGTCCAGAATAACCTCTAAGTTTTCTTTTTTCAAAACTAGCACAATTTTTCAAAACTCGTTATAATAGTGTTTCTTGTGCCATCTCGACCGAGATCGCACTCCAAGATTTTAGTGGAACGTTGAGTTTCATCTTTTTGATCCATAGGAAAAGACGATGATACCCTATTACCTTCAAACCCCAAACGTTTTCTTTATCAGCAAACTTTAGCATTTTTTTCCTTACATTTTGTTCATCAATCATTTTGAATCTCTGAAACTCTCTCAGTCTACACGTTTTTTTTGTGCCATTTCAATTGATTTCAACTCGCTCAAGTAGAGGTATTTCACATTTTTCTGTCTTTTTTTTAGTTAAAGGTTGTATTTTTAAGTTTATGAGGGTGAGTTTTTGAAGTTTAGGGTTTAGAAATTTTTGAAATATGACACCATCTATTGCATTTTCTTGGGTCTTTACCATGTTTTTTGGTAAAGATATTTGAATGCGTACTGTTTTCATGGCTTTTTCTTTTTGGGTGGGGGTGGGGGGGGGGGGGGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGAATAAATGTGGATTTGCTCGGGAACAGGTTGAATCTCCCCCAAGATTCATTCAATCTCTCTCGAGATTGTTCCAAAATTTGAGCTTTAAGACATTATGTGTTTGGTCGGTGCCTTTATCTCCCAAGACCAAATGCATAATGACTTAAAGATTGGAGCTCGGGGCTTGCCTTGGTCCTGGATGCCCGAGATTCATGCTTAATTCTACCCACTGTGTTCAATCTTGGAGCTCGAGCCCAGGATTATCTCCAAGATTCAAAACGATTTCTCAAATTTAGGTCAATAATTGTTACGTCTAATCTATTGGTTAGGTATTGAGTTTAGTTTTTTTATTTCTATTTGTTTTATAGATGCCATTAGTTTCCGAAATCCATAGTTCTAATTATTTTCTGGCCAACCTAACTTGTTGTTCCCATCTAGGAAAAAAAAATTTCCAACATTAAGAATAAGTTAACACCTAGACAATTATATATGTGTAGGCAAACCTATATTTAGATATTTTTTGGATCTTAAGCTATTTTTTAATGGTCCTCTGTGCCATTATATTCTTCTAAGGGAGGTGGAGGAGACTAGAGAGGACACTATTAGCTTTAAGTTATTGGAGAGAAAGGTGTCTTTTGGTCAAGAGCAGTTCGATCTAATGATGGAGTTGGGATATAGCTCTAAGCATGTGGTTGTGGCTGATCTCGGTCATAATTCAACATGTATTAATTTTTAATCTATTTCAAACTTTTTTTATTGAGTTTTCACACCATTCCACCATTCAATTTTTCATTTCCAATAAAAACAACTTGAACAAATAACATGTATTAGTTTTTAGCCCAATTCAAACTTTTTTCATTGAGTTTTCACATCAATTCATCATTCAATTCTTCATTTCAATAAAAATAATTTGAAAATTTCAGTTCATAATCAATTTTTTGGTCTTCACTATTATCATTATTCCACTACCAATCATAGTTGGCTTCTAATTGTTGATTTATATGCTTAAATTTATGATTTATTACTTAAATAAGTTTGTCATAAAATTTCACTAAAAAATTTACAATATTTTTACAAATTTATGTGATATCCGTGATTTTTTCTGAAATATTCGTCGATATCTAAATATCCGTCGATAAATCCGTAAATCTGAGTTACCGATATTTACACCAATAATGATATTTTCGTCCTTGGTCATGGTTGAGTTCAAATCGATCAAGAACATGCTTATGACTTTTGAAGGTAAGTTACAATCTTTCTCTGTGCTGGTTCATATTTTTAGGGTTTACGTTCTAAATTTTCTGTAATTTAGGTGTTTAAGATCTATATTTTTTGTTATCTTATAGGGTAAGTAAGTTGATCCTCAGCAGTATTCTGGGGTTGGGAAGGTCTGGTATTCATACCGAATGCCTGATTCCAACGGCTTGGTAGCCGAGGATCCACCTGTTGAGGATCTACCAGTTGATCGCACATTATTCAATGGACTTAATGATCGCACATCATTTGAACTCATGTGGTATTCAGGAATAAAATCAAGGTGAGAGGGAAATGAGGGTACATTTTAGGCTATCAAGATTGAAAATGACGGTATTATACTCCTAGTGTTATGAACTACTGTTGGTAACTTAGACATCAAAAGAGCCATTTGAGACATATCGTCACTAGTTAAGAAAAAATGAAGATCTTCTTGATTACTAATCACAAAAGCAGAGACACTTGGCCTAACATTATCAAACACCTTATAACCAACTCAAACTCAACAGAATTTATCTCACTTATTATATATATTTGCTGTAAAAATTTCTCATACATTATCCCGACGTCTACAAACAAACACTTCAATTGGTCCGATCCCCTACATATTCTTTATCCTTCTCCTTCCATTCGCCCTTAAAACAAACAAATATATAAGGAATTCTGAAAAAAGACAAACAACCATACAAAAAGTTACTAAAATTCATCAAAATCTCAGGGGGAATACTGAATCTCAGTAACAAAATGTTAATATCTCATCCAAGATTTGGATGTTGTTGAATGCATCTCGGGGCAAGTCACATTGATCTTGGGCGAGATTATTGTATAGTTGTAGTAAGAAAGCGACATCAAAGTCGATGGGAAGCAGGATACTGTGTTCGGCGGCTTGACATCTTCATTACCACCCATTTTTTTCATCACCTTTACTACTTTCATTATCACCCTGAAAATCTTCTGTATTGCTACAATCTTATTTTTAATATACATATCATGAACGTTGTCATCTTCATTACTTCCACTTTCATTTTAACATCCATCATGAGTAGCTAAATCTCTCAAGGGTTGGGTTAAATAAATCATCATTCTGATGAACGTCACTTAGATTCATTTTGTTTAGTGTGTCCTGATTCTTTTTGCTTGTTTTCATCTAACTAATCGAAACAAGTAACAATAGTTAACTGCTTGAGAGAGTAAGAAATTGTGGAGCTCACTAAACAAAGTAAGGAGTATCTTTAAAGATAAAGACAATCTTACGTTCAAATAACCTTCAAGCATGCTTCGTAGAAATATGACTTATATGACTCACTCAACGAGAGGTTGAGATTCTAGTTGTGGTTAAGAACAATGAACCGAAACCTAAGTGAAGTTCAAAAGAATGATGATTGTTTTTCCCCAACCTTGTTTCTATCAATTGCATTTTTACATCGTTTCAATCTTGCTTCACTACCATGCACCTTGCAGCTCATTCACTCTCATCCTACTGTTTATACATCTTGAATATCTTGAATACATGATCGTTTAAATACTTGACATTGCTAAGAATCATCCATAAACCATTCTCTAGTTAGTTGAATCAACGAAACCCCTGTGTTCGACCTTGATCCTCACCAAGAAATCCCTTTTTGAGTTTATACTTGGGTCCATTATAGAAAACTTGTAGGAAATTATTATAAATCATCAACACCACGGAAAGACAAGATGGAGGAATAAAATTTTTTATTTTCTAACTCAATCTCAGTCTCGATCTCAGCTGGGATGCCTCGAAAAAAACTATTCTAACAAGTTTTGAAAAATCGTGTTAGTTTTGAAATATGGAAACTTGAGGGAGTTATTTTGGACAATTTTTTATTTAAAAAGCTACTATATTTAGTTTATACATTTTTTTATATAAAATTTCATAGGAAAGAAGAAAAAAAAAAAGAATGATTATCGAACATGTTTTCATTTTTTTTTCTATTAAAAAAAGAAAGAAAAAGAAATAATAAACTGCTAACACATGCAATTATATTTTTCTTCCACTAAAAAGTAAAAATGGAAAATTATAAATGAGAAACAAGAAACACAAATAATTTAAATAACATGAGAAATTGGAATAAGAATTGAGAAACAATTAGATTCAGATGTGAGTATCTCACCATCTTCAAGGGAGAATGAATTCTAAAAATTAAAAAAAAAAAAGCTCTTGATTCTTAATTATCATAGGTTATATATATATATATATATATATATATTTATATTATTTTAAAATTTAAGTGTATTATTTAAAATTTTGAAAGTTGAGCAGTTTTGAGGAATGTGGGAAAAAGAATAAGGGTTTATTTGACATGCAATGTGAAAATTGAAAATTGAAAACAATGGATTCAACGGAAACATTGTTGTATTTCATATTTTCATATATGTATTCGGTAGCAGGTTTATAAATTGAATATAAATTTAAACAATTATTCAAAATCTTTTAGATAATATATTTCTAAACCATAGAACTAATGGTAGTTACCCACGAACTATTAGATTGAATATAAACAATTATTAATTTAGTTATGAACTTGTTTTAGATAAAAACTTTATATAATTATTATTTTGTAATATCATATAATTTATAATACATATTTTAATTTAACAAAATAATTGAGTTTATAACATAATATACTATACTTATTAACATTTTTTAAATATAATGCTGCTTTTGAAAATTTTAAATTCAAAGGTTGAAAACAATGAAAACATTAAAAAAAAAAACTAAATTATAAAAAATGTCCCTAAATTTTGCATTTTGGGTAAAAAAAAATACTCTCGAACTTTTAAAAGTTTAAAAAGTACCTTAAATTTTTAAAACGAATTCAAAAATACCCATACAATTAGTTTTGGATGAAAACGGTTAGAGTTTTGTTTAAAAAATAACCTAACTTTCAAAAGTTTCAAAAATACCCTGAAACTTTAAAAAAATTCAAACATACTCCATCGTTAGTATATGAACAAAAACCATTAATACCTCATTCGAAAAATAACTCTAATCTTTTTATAAAAAAAATTTAAATGCTCCTATCATTAATATGGTGATCAATTTGTTTGAAGTTTTTCTTAATTCGAAAAAGCCAATTATAAAACAAATTATATAAATATATTTTTTTATATAGACACCCTCCCTTTTCTCTTATTTTTCTAATTTTTATACTAAAATTTTTAGCAACCAAAATCAAAATCAAAATTTTAAATTAAAACAAAAAATCTCACAAAATTCTAAAATTAAAATCTCCCTTTAAAACATACCAAAACAATAGTCAGATAAAAAACGTATTTGGTTATTAACGCATACTCAACTACTAAAATACAACTTTGTTAAAACATTTAAGTCCTAAAATCTCTTGGTGCTTCCATTATGTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTCGTAAGTTTAAGGTTTTAGGCTTTATCCTCCTTTTTGCATTTTTCTGTTTTTTCTCAGCTCAAAACTACGCTAAAAAAACACTCACTGCCAAGCTTTTTTTCCTCTTGCCCGTTAGGGTTTCTGTTTTTCTTCTTCATTTTCCCTCTCTCGCTTCCCGCCTTGCCAGAGAACCGCCATGGATAGGTACCAAAAGCTCGACAAACCTAAACCTAAATCTCCTCTGAATGAAAATTAAATCCGCATTACCAGTCAAGGCGCTATTCGAAACTAAATCACTTATGCTTCCACCCTTCTCCAGGTATCATTTCACTCTTTCTTTTATCGTTTTCAACAGCTATTGTATCTCATTTCATTTTTTTTCTTTTTGGTGTATTCGTCTCATTGTTTCTGTTTATGTGTTGCGTTTGTTGATTTTTTTTTTCTTTAATGCTGAATCTGTAATAGTTGCTCGCTGGCTGATGATTTGAAGTCCTCCCAAATTCGGCTCTGTCACTCCCAACTCTGCATTTTCTATCCAACCGTAATCCACCTTCCGTTTTCTCCATGTCCATTCATACCTCTGCATTTTCAACTGTGACCCTTCTCCGTTCTCTCACTCTTCCCTTCTCTCCATACCATCACTACTTTCGTTGTCCCGATTACATAGTCCGTACTCTCTTTATCCCAGCGTATTCTGTAAAAGGACGACGACAACTTCCGCGGATTCCTGCCTTTGCTTCCAGTTCTTTTGTTGAACAGCTAGTGTATGACCGAGATTCCCCGTTCGAGTCTGAAGAGCACTTATCATCTCCATACAGTAATGGGGCTGATGGTTTTCAATCTGAAAATGGTTTTGCGTCAGCGGATTTGAAACATTTAGGAACGCCTGCGCTAGAAGTCAAGGAGCTGGATGAGTTGCCAGAGCAATGGCGAAGATCCAAATTGGCTTGGCTTTGTAAGGAATTGCCAGCACAAAAGCCGGGAACATTGATACGGCTGCTTAATGCTCAGAAGAAATGGCTGGGGCAAGATGACGCAACCTATCTCACCGTGCATTGTTTGCGTATTCGCGAAAACGAGACTGCATTTAGGGTTAGTGTCTTTTCTCTAGACTGCATTTAGGGTTAGTGTCTTTTCTCTTTCTTCTTTATTCTATTATGTTCCAACACCATAGGTATCACAACTTGTAATGCAATTATTGGTTTGTTGGGTTGAATAATAGGGAATTATTTGGAAGTGTTCAATTTTGGCTATGCTGTGCTTTATATATTTGGATTATATAATACTTGTAAAAAAAGTTTGGAATGTAGTAGTAGGGCTCTGAAGATAACTGTAGCATGAACACCATTTGGAAAGAACGAAATCTCTGGAATAAAAGTAAATTTTGATAGTTCTCTTTATTTGCTATTTTTTGTAACCTATGTTTGTGATATAATTTTCTTTCTACTTTTTCATTTTTTTCATTTTGGAGATTAGGTGTACAAGTGGATGTTGCAACAACGTTGGTACCGATTTGATTATGCTTTAGCTACTAAGCTTGCTGATTACATGGGCAAGGAACGAAAATTCTCAAAGTGTCGGGAAGTATTTGATGATATAATTAATCAGGGCTGCGTGCCAAGTGAATCCACATTTCATATATTGATTGTTGCATACCTTAGTGCACCTGTTCAAGGATGCATAGAGGAAGCAAGTACCATTTACAATCGTATGATTCAGTTAGGAGGTTACCAACCACGTCTTAGCTTGCACAATTCTCTCTTTAGAGCTCTTATGAGCAAACCAGGGGATTTGTCAAAGCATCATCTTAAACAGGCTGAGTTTATATATCACAATTTGGTAACAAGTGGACTTGAGTTACATAAAGATATATATGGTGGTCTAATTTGGCTACATAGTTATCAGGATACTATAGACAAAGAAAGGATAGTGTTTCTAAGGAAAGAAATGCAACAAGCAGGAATCAAGGAGGAAAGAGAAGTCCTTTTGTCCATATTGAGAGCGAGCTCAAAAATGGGGGATGTAGTGGAAGCAGAAAGATCGTGGCAAAAACTTACGTATTTTGATGGCAGCATGCCATCTCAAGCTTTTGTTTACAAAATGGAAGTCTATTCAAAGATGGGCAGACCAATGAAAGCTCTGGAGATCTTTAGGGAGATGGAGCAGTTGAACTCTACAAGCGCTGCAGCATATCAGACAGTTATTGGTATTTTATGTAAATTTCAAGAGATAGAACTTGCAGAATCAATCATGTCAGGCTTCATAAAGAGTAATTTAAAACCCCTCATGCCAGCTTATGTTGATTTGATGAATATGTTTTTCAATTTAAGCTTACACGATAAGTTAGAGTTAACCTTCTCTCAGTGCCTTGAGAAGTGTAAACCCAATCGTACTATCTATAGCATATATTTGGACTCTTTGGTAAAAGTTGGTAACATCTACAAGGCCGAAGAAATATTTAATCAGATGGAAACAAATGGAGAAATTGGTATAAATGCTCGTTCATGCAACATCATTTTGAGTGGGTATCTTTTATTTGGAAATTATTTGAAGGCTGAAAAAATATATGATTTGATGTGTCAGAAGAAGTATGACATTGATCCTCCATTAATGGAGAAACTTGATTATGTCCTAAGCTTGAGTAGGAAGGAGGTTAAGAAGCCAGTAAGCTTGAAGTTGAGTAAAGAACAGAGGGAGATTTTAATAGGGTTGTTGTTGGGTGGCCTGGAGATAGAGTCTGATGAAGAGAGGAAAAATCATAGAATCCATTTTGAATTCCTCAAAAACAGTAACTCCCACTCTCTTTTGAGGAGACACATATATGAGCAATATCATGAATGGTTACATCCTGCTTCGAAGTTGAGCGATGGTGATATAGATATACCATATAAATTCTGCACTGTTTCACATTCATATTTTGGTTTCTATGCAGATCAGTTTTGGCCACGAGGCCATCCTGCAATCCCTAATCTAATTCACCGGTGGCTTTCACCTCGTGTTCTTGCATACTGGTATATGTATGGAGGCTGCAGGACATCATCAGGGGATATTTTACTGAAGCTAAAGGGAAGTCATGAGGGTGTTGAGAAGATTGTTAAATCTTTGAGAGAGAAGTCCATGCATTGCAAAGTGAAAAGGAAGGGCAACATGTATTGGATAGGTTTACTTGGAAGCAACGCCACATGGTTCTGGAAACTAATTGAACCTTTCATTCTGGATTACTTGAAAGATAGTCTACATGCAGACAGTCTTAACTTGGAGAGGGTTTTAAATGAAACTGAAAATATCAACTTTGATAGTCAATCTGATTCCGTTGGGGAGGCTTCTAATTAA

mRNA sequence

ATAATTTATCATAAATTCTTTGTCCTTTAAAAATTTTCTTTATAAATGACTCATATTCACATGCCAACTCTTTCTTGTACTCATTGCTTGGTTGTCTTCAGCATCTTCCTTAGATTCTCATTCTCTGTCTTCATTTTCCCCTTCAGTCTTTCACAGTGAAGACAGAGAATCTTCAGCAAAGAGACAGCACAGAACAGATCTCTCTAATAAGTGCTTTTTTTCCATTTTGACTCAAAATTTGTCATTTTTCTTTGACATGTGCGTAACCCCTTTTAAAAAAACCTCACTTTACCAATCATAGTCATGCAGCAAGTTCTTCAATGGGTTTTCAAGGAAACAAATGAAAAACAAGGACAGAGGACTTCACAATCCACCAAGAAGGAGACAAGTTGGGATAAAGGAACTGCTGCTAGATCAAAGGAGATAGTGGTGTCTAGTTCATGTGGGAGTTCTCAAAGATCAAAGGGATTTGAAGGAAGGAAATTTGATCTAAAGAAGTTGAAATCATTTGCTTTGTTGTGCAGAAAGGATATTTCAAAGTCTTGCTTTTATAGTACCATTAATATAAAGAGACCAAGAACACAGGGCTTTGATAATATGCACCATTATTGGATCCAAAAGATGAAAAAAGAAGATATTGCTAAGGGAATTAGAGAGATTGGTCAAAAGGCAGATTCTTCTTCTTCTTCTGTTCATGCTGGCACCAAAGTCTTGCCAATAACTGATGCCACTTTAGTAGAGCAATGCAGCAGTAAGACTGAGAAGAAAGTTTTGGCCAATGGAGAGAGTAAAACCAAAACCAAATCAAGAATGAAGGAACTTTTGAGATGGGCTATGACTTCAAGATCAGAAAAAGGAGGGAAGTTCATCACTGGCAAGGTTTCACGAATGAGAAACCGAGGAACTCTTAAAGCAGGTTTGGACGATGATCGAGGGAGTAACGACTCCCCCAAGATTAGTTTCAGATGGGAAGCTGAAAGCTGCTCCTCCATTTCCTCAGCCTACTCGTCGGTGTCGGCGGTGTCCCCATTCAAAAACTGTTCCATCACACTGAATTCCACTGCCATTCATGAAATCAATCAATATTATCCAAGAAGAGGAAGCTGGATCACTACAGATTCTGAATCTCAAAACTACGCTAAAAAAACACTCACTGCCAAGCTTTTTTTCCTCTTGCCCGTTAGGGTTTCTGTTTTTCTTCTTCATTTTCCCTCTCTCGCTTCCCGCCTTGCCAGAGAACCGCCATGGATAGTCCTCCCAAATTCGGCTCTGTCACTCCCAACTCTGCATTTTCTATCCAACCGTAATCCACCTTCCGTTTTCTCCATGTCCATTCATACCTCTGCATTTTCAACTGTGACCCTTCTCCGTTCTCTCACTCTTCCCTTCTCTCCATACCATCACTACTTTCGTTGTCCCGATTACATAGTCCGTACTCTCTTTATCCCAGCGTATTCTGTAAAAGGACGACGACAACTTCCGCGGATTCCTGCCTTTGCTTCCAGTTCTTTTGTTGAACAGCTAGTGTATGACCGAGATTCCCCGTTCGAGTCTGAAGAGCACTTATCATCTCCATACAGTAATGGGGCTGATGGTTTTCAATCTGAAAATGGTTTTGCGTCAGCGGATTTGAAACATTTAGGAACGCCTGCGCTAGAAGTCAAGGAGCTGGATGAGTTGCCAGAGCAATGGCGAAGATCCAAATTGGCTTGGCTTTGTAAGGAATTGCCAGCACAAAAGCCGGGAACATTGATACGGCTGCTTAATGCTCAGAAGAAATGGCTGGGGCAAGATGACGCAACCTATCTCACCGTGCATTGTTTGCGTATTCGCGAAAACGAGACTGCATTTAGGGTGTACAAGTGGATGTTGCAACAACGTTGGTACCGATTTGATTATGCTTTAGCTACTAAGCTTGCTGATTACATGGGCAAGGAACGAAAATTCTCAAAGTGTCGGGAAGTATTTGATGATATAATTAATCAGGGCTGCGTGCCAAGTGAATCCACATTTCATATATTGATTGTTGCATACCTTAGTGCACCTGTTCAAGGATGCATAGAGGAAGCAAGTACCATTTACAATCGTATGATTCAGTTAGGAGGTTACCAACCACGTCTTAGCTTGCACAATTCTCTCTTTAGAGCTCTTATGAGCAAACCAGGGGATTTGTCAAAGCATCATCTTAAACAGGCTGAGTTTATATATCACAATTTGGTAACAAGTGGACTTGAGTTACATAAAGATATATATGGTGGTCTAATTTGGCTACATAGTTATCAGGATACTATAGACAAAGAAAGGATAGTGTTTCTAAGGAAAGAAATGCAACAAGCAGGAATCAAGGAGGAAAGAGAAGTCCTTTTGTCCATATTGAGAGCGAGCTCAAAAATGGGGGATGTAGTGGAAGCAGAAAGATCGTGGCAAAAACTTACGTATTTTGATGGCAGCATGCCATCTCAAGCTTTTGTTTACAAAATGGAAGTCTATTCAAAGATGGGCAGACCAATGAAAGCTCTGGAGATCTTTAGGGAGATGGAGCAGTTGAACTCTACAAGCGCTGCAGCATATCAGACAGTTATTGGTATTTTATGTAAATTTCAAGAGATAGAACTTGCAGAATCAATCATGTCAGGCTTCATAAAGAGTAATTTAAAACCCCTCATGCCAGCTTATGTTGATTTGATGAATATGTTTTTCAATTTAAGCTTACACGATAAGTTAGAGTTAACCTTCTCTCAGTGCCTTGAGAAGTGTAAACCCAATCGTACTATCTATAGCATATATTTGGACTCTTTGGTAAAAGTTGGTAACATCTACAAGGCCGAAGAAATATTTAATCAGATGGAAACAAATGGAGAAATTGGTATAAATGCTCGTTCATGCAACATCATTTTGAGTGGGTATCTTTTATTTGGAAATTATTTGAAGGCTGAAAAAATATATGATTTGATGTGTCAGAAGAAGTATGACATTGATCCTCCATTAATGGAGAAACTTGATTATGTCCTAAGCTTGAGTAGGAAGGAGGTTAAGAAGCCAGTAAGCTTGAAGTTGAGTAAAGAACAGAGGGAGATTTTAATAGGGTTGTTGTTGGGTGGCCTGGAGATAGAGTCTGATGAAGAGAGGAAAAATCATAGAATCCATTTTGAATTCCTCAAAAACAGTAACTCCCACTCTCTTTTGAGGAGACACATATATGAGCAATATCATGAATGGTTACATCCTGCTTCGAAGTTGAGCGATGGTGATATAGATATACCATATAAATTCTGCACTGTTTCACATTCATATTTTGGTTTCTATGCAGATCAGTTTTGGCCACGAGGCCATCCTGCAATCCCTAATCTAATTCACCGGTGGCTTTCACCTCGTGTTCTTGCATACTGGTATATGTATGGAGGCTGCAGGACATCATCAGGGGATATTTTACTGAAGCTAAAGGGAAGTCATGAGGGTGTTGAGAAGATTGTTAAATCTTTGAGAGAGAAGTCCATGCATTGCAAAGTGAAAAGGAAGGGCAACATGTATTGGATAGGTTTACTTGGAAGCAACGCCACATGGTTCTGGAAACTAATTGAACCTTTCATTCTGGATTACTTGAAAGATAGTCTACATGCAGACAGTCTTAACTTGGAGAGGGTTTTAAATGAAACTGAAAATATCAACTTTGATAGTCAATCTGATTCCGTTGGGGAGGCTTCTAATTAA

Coding sequence (CDS)

ATGCAGCAAGTTCTTCAATGGGTTTTCAAGGAAACAAATGAAAAACAAGGACAGAGGACTTCACAATCCACCAAGAAGGAGACAAGTTGGGATAAAGGAACTGCTGCTAGATCAAAGGAGATAGTGGTGTCTAGTTCATGTGGGAGTTCTCAAAGATCAAAGGGATTTGAAGGAAGGAAATTTGATCTAAAGAAGTTGAAATCATTTGCTTTGTTGTGCAGAAAGGATATTTCAAAGTCTTGCTTTTATAGTACCATTAATATAAAGAGACCAAGAACACAGGGCTTTGATAATATGCACCATTATTGGATCCAAAAGATGAAAAAAGAAGATATTGCTAAGGGAATTAGAGAGATTGGTCAAAAGGCAGATTCTTCTTCTTCTTCTGTTCATGCTGGCACCAAAGTCTTGCCAATAACTGATGCCACTTTAGTAGAGCAATGCAGCAGTAAGACTGAGAAGAAAGTTTTGGCCAATGGAGAGAGTAAAACCAAAACCAAATCAAGAATGAAGGAACTTTTGAGATGGGCTATGACTTCAAGATCAGAAAAAGGAGGGAAGTTCATCACTGGCAAGGTTTCACGAATGAGAAACCGAGGAACTCTTAAAGCAGGTTTGGACGATGATCGAGGGAGTAACGACTCCCCCAAGATTAGTTTCAGATGGGAAGCTGAAAGCTGCTCCTCCATTTCCTCAGCCTACTCGTCGGTGTCGGCGGTGTCCCCATTCAAAAACTGTTCCATCACACTGAATTCCACTGCCATTCATGAAATCAATCAATATTATCCAAGAAGAGGAAGCTGGATCACTACAGATTCTGAATCTCAAAACTACGCTAAAAAAACACTCACTGCCAAGCTTTTTTTCCTCTTGCCCGTTAGGGTTTCTGTTTTTCTTCTTCATTTTCCCTCTCTCGCTTCCCGCCTTGCCAGAGAACCGCCATGGATAGTCCTCCCAAATTCGGCTCTGTCACTCCCAACTCTGCATTTTCTATCCAACCGTAATCCACCTTCCGTTTTCTCCATGTCCATTCATACCTCTGCATTTTCAACTGTGACCCTTCTCCGTTCTCTCACTCTTCCCTTCTCTCCATACCATCACTACTTTCGTTGTCCCGATTACATAGTCCGTACTCTCTTTATCCCAGCGTATTCTGTAAAAGGACGACGACAACTTCCGCGGATTCCTGCCTTTGCTTCCAGTTCTTTTGTTGAACAGCTAGTGTATGACCGAGATTCCCCGTTCGAGTCTGAAGAGCACTTATCATCTCCATACAGTAATGGGGCTGATGGTTTTCAATCTGAAAATGGTTTTGCGTCAGCGGATTTGAAACATTTAGGAACGCCTGCGCTAGAAGTCAAGGAGCTGGATGAGTTGCCAGAGCAATGGCGAAGATCCAAATTGGCTTGGCTTTGTAAGGAATTGCCAGCACAAAAGCCGGGAACATTGATACGGCTGCTTAATGCTCAGAAGAAATGGCTGGGGCAAGATGACGCAACCTATCTCACCGTGCATTGTTTGCGTATTCGCGAAAACGAGACTGCATTTAGGGTGTACAAGTGGATGTTGCAACAACGTTGGTACCGATTTGATTATGCTTTAGCTACTAAGCTTGCTGATTACATGGGCAAGGAACGAAAATTCTCAAAGTGTCGGGAAGTATTTGATGATATAATTAATCAGGGCTGCGTGCCAAGTGAATCCACATTTCATATATTGATTGTTGCATACCTTAGTGCACCTGTTCAAGGATGCATAGAGGAAGCAAGTACCATTTACAATCGTATGATTCAGTTAGGAGGTTACCAACCACGTCTTAGCTTGCACAATTCTCTCTTTAGAGCTCTTATGAGCAAACCAGGGGATTTGTCAAAGCATCATCTTAAACAGGCTGAGTTTATATATCACAATTTGGTAACAAGTGGACTTGAGTTACATAAAGATATATATGGTGGTCTAATTTGGCTACATAGTTATCAGGATACTATAGACAAAGAAAGGATAGTGTTTCTAAGGAAAGAAATGCAACAAGCAGGAATCAAGGAGGAAAGAGAAGTCCTTTTGTCCATATTGAGAGCGAGCTCAAAAATGGGGGATGTAGTGGAAGCAGAAAGATCGTGGCAAAAACTTACGTATTTTGATGGCAGCATGCCATCTCAAGCTTTTGTTTACAAAATGGAAGTCTATTCAAAGATGGGCAGACCAATGAAAGCTCTGGAGATCTTTAGGGAGATGGAGCAGTTGAACTCTACAAGCGCTGCAGCATATCAGACAGTTATTGGTATTTTATGTAAATTTCAAGAGATAGAACTTGCAGAATCAATCATGTCAGGCTTCATAAAGAGTAATTTAAAACCCCTCATGCCAGCTTATGTTGATTTGATGAATATGTTTTTCAATTTAAGCTTACACGATAAGTTAGAGTTAACCTTCTCTCAGTGCCTTGAGAAGTGTAAACCCAATCGTACTATCTATAGCATATATTTGGACTCTTTGGTAAAAGTTGGTAACATCTACAAGGCCGAAGAAATATTTAATCAGATGGAAACAAATGGAGAAATTGGTATAAATGCTCGTTCATGCAACATCATTTTGAGTGGGTATCTTTTATTTGGAAATTATTTGAAGGCTGAAAAAATATATGATTTGATGTGTCAGAAGAAGTATGACATTGATCCTCCATTAATGGAGAAACTTGATTATGTCCTAAGCTTGAGTAGGAAGGAGGTTAAGAAGCCAGTAAGCTTGAAGTTGAGTAAAGAACAGAGGGAGATTTTAATAGGGTTGTTGTTGGGTGGCCTGGAGATAGAGTCTGATGAAGAGAGGAAAAATCATAGAATCCATTTTGAATTCCTCAAAAACAGTAACTCCCACTCTCTTTTGAGGAGACACATATATGAGCAATATCATGAATGGTTACATCCTGCTTCGAAGTTGAGCGATGGTGATATAGATATACCATATAAATTCTGCACTGTTTCACATTCATATTTTGGTTTCTATGCAGATCAGTTTTGGCCACGAGGCCATCCTGCAATCCCTAATCTAATTCACCGGTGGCTTTCACCTCGTGTTCTTGCATACTGGTATATGTATGGAGGCTGCAGGACATCATCAGGGGATATTTTACTGAAGCTAAAGGGAAGTCATGAGGGTGTTGAGAAGATTGTTAAATCTTTGAGAGAGAAGTCCATGCATTGCAAAGTGAAAAGGAAGGGCAACATGTATTGGATAGGTTTACTTGGAAGCAACGCCACATGGTTCTGGAAACTAATTGAACCTTTCATTCTGGATTACTTGAAAGATAGTCTACATGCAGACAGTCTTAACTTGGAGAGGGTTTTAAATGAAACTGAAAATATCAACTTTGATAGTCAATCTGATTCCGTTGGGGAGGCTTCTAATTAA

Protein sequence

MQQVLQWVFKETNEKQGQRTSQSTKKETSWDKGTAARSKEIVVSSSCGSSQRSKGFEGRKFDLKKLKSFALLCRKDISKSCFYSTINIKRPRTQGFDNMHHYWIQKMKKEDIAKGIREIGQKADSSSSSVHAGTKVLPITDATLVEQCSSKTEKKVLANGESKTKTKSRMKELLRWAMTSRSEKGGKFITGKVSRMRNRGTLKAGLDDDRGSNDSPKISFRWEAESCSSISSAYSSVSAVSPFKNCSITLNSTAIHEINQYYPRRGSWITTDSESQNYAKKTLTAKLFFLLPVRVSVFLLHFPSLASRLAREPPWIVLPNSALSLPTLHFLSNRNPPSVFSMSIHTSAFSTVTLLRSLTLPFSPYHHYFRCPDYIVRTLFIPAYSVKGRRQLPRIPAFASSSFVEQLVYDRDSPFESEEHLSSPYSNGADGFQSENGFASADLKHLGTPALEVKELDELPEQWRRSKLAWLCKELPAQKPGTLIRLLNAQKKWLGQDDATYLTVHCLRIRENETAFRVYKWMLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPVQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNLVTSGLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRASSKMGDVVEAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLNSTSAAAYQTVIGILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPNRTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILIGLLLGGLEIESDEERKNHRIHFEFLKNSNSHSLLRRHIYEQYHEWLHPASKLSDGDIDIPYKFCTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVKSLREKSMHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKDSLHADSLNLERVLNETENINFDSQSDSVGEASN
Homology
BLAST of Lsi05G011060 vs. ExPASy Swiss-Prot
Match: Q9XIL5 (Pentatricopeptide repeat-containing protein At2g15820, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OTP51 PE=2 SV=3)

HSP 1 Score: 895.6 bits (2313), Expect = 5.9e-259
Identity = 458/833 (54.98%), Postives = 616/833 (73.95%), Query Frame = 0

Query: 320  NSALSLPTLHFLSNRNPPSVFSMSIHTSAFSTVTLLRSLTLPFSPYHHYFRCPDYIVRTL 379
            +S +S+ T +  S  + P++ +        S+ TL RSL+  FS   H        +R L
Sbjct: 30   SSTVSVTTFNISSLSSNPNIIN--------SSSTLFRSLS--FSLIRHRSSYSRRSLRRL 89

Query: 380  FIPAYSVKGRRQLPRIPAFASSSFVEQLVYDRDSPFESE----EHLSSPYSNGADGFQSE 439
             I  ++V G     +   F+ SS     ++  +S  +      EHL+   +   +G    
Sbjct: 90   SI--HTVHGN----KTQFFSHSSTRTPPLFTANSTAQRSGTFVEHLTG-ITESEEGISEA 149

Query: 440  NGF-----ASADLKHLGTPAL----EVKELDELPEQWRRSKLAWLCKELPAQKPGTLIRL 499
            NGF     A  D++++ T  +    EV+EL+ELPE+WRRSKLAWLCKE+P  K  TL+RL
Sbjct: 150  NGFGDVESARNDIRNVATRRIETEFEVRELEELPEEWRRSKLAWLCKEVPTHKAVTLVRL 209

Query: 500  LNAQKKWLGQDDATYLTVHCLRIRENETAFRVYKWMLQQRWYRFDYALATKLADYMGKER 559
            LNAQKKW+ Q+DATY++VHC+RIRENET FRVY+WM QQ WYRFD+ L TKLA+Y+GKER
Sbjct: 210  LNAQKKWVRQEDATYISVHCMRIRENETGFRVYRWMTQQNWYRFDFGLTTKLAEYLGKER 269

Query: 560  KFSKCREVFDDIINQGCVPSESTFHILIVAYLSA-PVQGCIEEASTIYNRMIQLGGYQPR 619
            KF+KCREVFDD++NQG VPSESTFHIL+VAYLS+  V+GC+EEA ++YNRMIQLGGY+PR
Sbjct: 270  KFTKCREVFDDVLNQGRVPSESTFHILVVAYLSSLSVEGCLEEACSVYNRMIQLGGYKPR 329

Query: 620  LSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNLVTSGLELHKDIYGGLIWLHSYQDTIDK 679
            LSLHNSLFRAL+SK G +    LKQAEFI+HN+VT+GLE+ KDIY GLIWLHS QD +D 
Sbjct: 330  LSLHNSLFRALVSKQGGILNDQLKQAEFIFHNVVTTGLEVQKDIYSGLIWLHSCQDEVDI 389

Query: 680  ERIVFLRKEMQQAGIKEEREVLLSILRASSKMGDVVEAERSWQKLTYFDGSMPSQAFVYK 739
             RI  LR+EM++AG +E +EV++S+LRA +K G V E ER+W +L   D  +PSQAFVYK
Sbjct: 390  GRINSLREEMKKAGFQESKEVVVSLLRAYAKEGGVEEVERTWLELLDLDCGIPSQAFVYK 449

Query: 740  MEVYSKMGRPMKALEIFREMEQ-LNSTSAAAYQTVIGILCKFQEIELAESIMSGFIKSNL 799
            +E YSK+G   KA+EIFREME+ +   + + Y  +I +LCK Q++EL E++M  F +S  
Sbjct: 450  IEAYSKVGDFAKAMEIFREMEKHIGGATMSGYHKIIEVLCKVQQVELVETLMKEFEESGK 509

Query: 800  KPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPNRTIYSIYLDSLVKVGNIYKAEEI 859
            KPL+P+++++  M+F+L LH+KLE+ F QCLEKC+P++ IY+IYLDSL K+GN+ KA ++
Sbjct: 510  KPLLPSFIEIAKMYFDLGLHEKLEMAFVQCLEKCQPSQPIYNIYLDSLTKIGNLEKAGDV 569

Query: 860  FNQMETNGEIGINARSCNIILSGYLLFGNYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLS 919
            FN+M+ NG I ++ARSCN +L GYL  G  ++AE+IYDLM  KKY+I+PPLMEKLDY+LS
Sbjct: 570  FNEMKNNGTINVSARSCNSLLKGYLDCGKQVQAERIYDLMRMKKYEIEPPLMEKLDYILS 629

Query: 920  LSRKEVKK-PVSLKLSKEQREILIGLLLGGLEIESDEERKNHRIHFEFLKNSNSHSLLRR 979
            L +KEVKK P S+KLSK+QRE+L+GLLLGGL+IESD+E+K+H I FEF +NS +H +L++
Sbjct: 630  LKKKEVKKRPFSMKLSKDQREVLVGLLLGGLQIESDKEKKSHMIKFEFRENSQAHLVLKQ 689

Query: 980  HIYEQYHEWLHPASKLSDGDIDIPYKFCTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSP 1039
            +I++Q+ EWLHP S   + DI IP++F +V HSYFGFYA+ +WP+G P IP LIHRWLSP
Sbjct: 690  NIHDQFREWLHPLSNFQE-DI-IPFEFYSVPHSYFGFYAEHYWPKGQPEIPKLIHRWLSP 749

Query: 1040 RVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVKSLREKSMHCKVKRKGNMYWIGLLGS 1099
              LAYWYMY G +TSSGDI+L+LKGS EGVEK+VK+L+ KSM C+VK+KG ++WIGL G+
Sbjct: 750  HSLAYWYMYSGVKTSSGDIILRLKGSLEGVEKVVKALQAKSMECRVKKKGKVFWIGLQGT 809

Query: 1100 NATWFWKLIEPFILDYLKDSLHADSLNLERVLN-ETENINFDSQSDSVGEASN 1136
            N+  FWKLIEP +L+ LK+ L   S +L+ V   E ++INF S SD   +  N
Sbjct: 810  NSALFWKLIEPHVLENLKEHLKPASESLDNVKEAEEQSINFKSNSDHSDDCVN 843

BLAST of Lsi05G011060 vs. ExPASy Swiss-Prot
Match: Q6ZHJ5 (Pentatricopeptide repeat-containing protein OTP51, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=OTP51 PE=3 SV=1)

HSP 1 Score: 808.1 bits (2086), Expect = 1.2e-232
Identity = 397/739 (53.72%), Postives = 543/739 (73.48%), Query Frame = 0

Query: 393  PRIPAFASSSFVEQLVYDRDSPFESEEHLSSPYSNGADGFQSENGFASADLKHLGTPALE 452
            P IPA AS+  +E L+ D D   E E+            FQ E   A+ + + + +P L 
Sbjct: 51   PGIPAVASA--LESLILDLDDDEEDEDE-----ETEFGLFQGEAWAAADEREAVRSPELV 110

Query: 453  VKELDELPEQWRRSKLAWLCKELPAQKPGTLIRLLNAQKKWLGQDDATYLTVHCLRIREN 512
            V EL+ELPEQWRRS++AWLCKELPA K  T  R+LNAQ+KW+ QDDATY+ VHCLRIR N
Sbjct: 111  VPELEELPEQWRRSRIAWLCKELPAYKHSTFTRILNAQRKWITQDDATYVAVHCLRIRNN 170

Query: 513  ETAFRVYKWMLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHI 572
            + AFRVY WM++Q W+RF++ALAT++AD +G++ K  KCREVF+ ++ QG VP+ESTFHI
Sbjct: 171  DAAFRVYSWMVRQHWFRFNFALATRVADCLGRDGKVEKCREVFEAMVKQGRVPAESTFHI 230

Query: 573  LIVAYLSAPVQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAE 632
            LIVAYLS P   C+EEA TIYN+MIQ+GGY+PRLSLHNSLFRAL+SK G  +K++LKQAE
Sbjct: 231  LIVAYLSVPKGRCLEEACTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGTAKYNLKQAE 290

Query: 633  FIYHNLVTSGLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILR 692
            F+YHN+VT+ L++HKD+Y GLIWLHSYQD ID+ERI+ LRKEM+QAG  E  +VL+S++R
Sbjct: 291  FVYHNVVTTNLDVHKDVYAGLIWLHSYQDVIDRERIIALRKEMKQAGFDEGIDVLVSVMR 350

Query: 693  ASSKMGDVVEAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLN-ST 752
            A SK G+V E E +W  +      +P QA+V +ME Y++ G PMK+L++F+EM+  N   
Sbjct: 351  AFSKEGNVAETEATWHNILQSGSDLPVQAYVCRMEAYARTGEPMKSLDMFKEMKDKNIPP 410

Query: 753  SAAAYQTVIGILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTF 812
            + A+Y  +I I+ K  E+++ E +M+ FI+S++K LMPA++DLM M+ +L +H+KLELTF
Sbjct: 411  NVASYHKIIEIMTKALEVDIVEQLMNEFIESDMKHLMPAFLDLMYMYMDLDMHEKLELTF 470

Query: 813  SQCLEKCKPNRTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLF 872
             +C+ +C+PNR +Y+IYL+SLVKVGNI KAEE+F +M  NG IG N +SCNI+L GYL  
Sbjct: 471  LKCIARCRPNRILYTIYLESLVKVGNIEKAEEVFGEMHNNGMIGTNTKSCNIMLRGYLSA 530

Query: 873  GNYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEVK-KPVSLKLSKEQREILIGLL 932
             +Y KAEK+YD+M +KKYD+    +EKL   L L++K +K K VS+KL +EQREILIGLL
Sbjct: 531  EDYQKAEKVYDMMSKKKYDVQADSLEKLQSGLLLNKKVIKPKTVSMKLDQEQREILIGLL 590

Query: 933  LGGLEIESDEERKNHRIHFEFLKNSNSHSLLRRHIYEQYHEWLHPASKLSDGDIDIPYKF 992
            LGG  +ES  +R  H +HF+F ++SN+HS+LR HI+E++ EWL  AS+  D    IPY+F
Sbjct: 591  LGGTRMESYAQRGVHIVHFQFQEDSNAHSVLRVHIHERFFEWLSSASRSFDDGSKIPYQF 650

Query: 993  CTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSH 1052
             T+ H +F F+ DQF+ +G P +P LIHRWL+PRVLAYW+M+GG +  SGDI+LKL G +
Sbjct: 651  STIPHQHFSFFVDQFFLKGQPVLPKLIHRWLTPRVLAYWFMFGGSKLPSGDIVLKLSGGN 710

Query: 1053 -EGVEKIVKSLREKSMHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKDSLHADSL 1112
             EGVE+IV SL  +S+  KVKRKG  +WIG  GSNA  FW++IEP +L+     +  +  
Sbjct: 711  SEGVERIVNSLHTQSLTSKVKRKGRFFWIGFQGSNAESFWRIIEPHVLNNFASLVTQEGS 770

Query: 1113 NLERVLNETENINFDSQSD 1129
            ++    + T++ + DS  D
Sbjct: 771  SIGS--DGTQDTDTDSDDD 780

BLAST of Lsi05G011060 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.7e-11
Identity = 81/341 (23.75%), Postives = 147/341 (43.11%), Query Frame = 0

Query: 544 KERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPVQGCIEEASTIYNRMIQLGGYQ 603
           KE    K    + +++++G +P   T++ +I A   A     +++A  + N M++  G  
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ---AMDKAMEVLNTMVK-NGVM 267

Query: 604 PRLSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNLVTSGLELHKDIYGGLIWLHSYQDTI 663
           P    +NS+        G  S    K+A      + + G+E     Y  L+         
Sbjct: 268 PDCMTYNSILH------GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 327

Query: 664 DKERIVFLRKEMQQAGIKEEREVLLSILRASSKMGDVVEAERSWQKLTYFDGSMPSQ-AF 723
            + R +F    M + G+K E     ++L+  +  G +VE       L   +G  P    F
Sbjct: 328 MEARKIF--DSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPDHYVF 387

Query: 724 VYKMEVYSKMGRPMKALEIFREMEQLN-STSAAAYQTVIGILCKFQEIELAESIMSGFIK 783
              +  Y+K G+  +A+ +F +M Q   + +A  Y  VIGILCK   +E A       I 
Sbjct: 388 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 447

Query: 784 SNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEK--CKPNRTIYSIYLDSLVKVGNIY 843
             L P    Y  L++     +  ++ E    + L++  C  N   ++  +DS  K G + 
Sbjct: 448 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL-NTIFFNSIIDSHCKEGRVI 507

Query: 844 KAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAEKI 881
           ++E++F  M   G +  N  + N +++GY L G   +A K+
Sbjct: 508 ESEKLFELMVRIG-VKPNVITYNTLINGYCLAGKMDEAMKL 533

BLAST of Lsi05G011060 vs. ExPASy Swiss-Prot
Match: Q5G1S8 (Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB1270 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-10
Identity = 68/309 (22.01%), Postives = 135/309 (43.69%), Query Frame = 0

Query: 547 KFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPVQGCIEEASTIYNRMIQLGGYQPRL 606
           KFSK +E+ D +  +GCVP   +F+ LI A L +   G     +     M++  G +P  
Sbjct: 240 KFSKAQELVDAMRQRGCVPDLISFNTLINARLKS--GGLTPNLAVELLDMVRNSGLRPDA 299

Query: 607 SLHNSLFRALMSKPGDLSKHHLKQAEFIYHNLVTSGLELHKDIYGGLIWLHSYQDTIDKE 666
             +N+L  A           +L  A  ++ ++     +     Y  +I ++       + 
Sbjct: 300 ITYNTLLSACS------RDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 359

Query: 667 RIVFLRKEMQQAGIKEEREVLLSILRASSKMGDVVEAERSWQKLTYFDGSMPSQAFVYKM 726
             +F+  E++  G   +     S+L A ++  +  + +  +Q++           +   +
Sbjct: 360 ERLFM--ELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 419

Query: 727 EVYSKMGRPMKALEIFREMEQLN--STSAAAYQTVIGILCKFQEIELAESIMSGFIKSNL 786
            +Y K G+   AL+++++M+ L+  +  A  Y  +I  L K      A ++MS  +   +
Sbjct: 420 HMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGI 479

Query: 787 KPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEK-CKPNRTIYSIYLDSLVKVGNIYKAEE 846
           KP +  Y  L+  +      ++ E TFS  L    KP+   YS+ LD L++     KA  
Sbjct: 480 KPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWG 538

Query: 847 IFNQMETNG 853
           ++  M ++G
Sbjct: 540 LYRDMISDG 538

BLAST of Lsi05G011060 vs. ExPASy Swiss-Prot
Match: P0C8Q6 (Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g08310 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-10
Identity = 63/274 (22.99%), Postives = 120/274 (43.80%), Query Frame = 0

Query: 515 AFRVYKWMLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILI 574
           A+  + W  +Q  YR D      +A  + + R+ +  + +  D++N  C  S   F   I
Sbjct: 89  AYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFI 148

Query: 575 VAYLSAPVQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFI 634
               +A   G ++EAS++++R+ ++G   P    +N L  A       +SK +    E +
Sbjct: 149 RCLGNA---GLVDEASSVFDRVREMGLCVPNAYTYNCLLEA-------ISKSNSSSVELV 208

Query: 635 YHNL-VTSGLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRA 694
              L        H D +     L  Y +T   ER + +  E+   G  +E  +   ++ +
Sbjct: 209 EARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDE-HISTILVVS 268

Query: 695 SSKMGDVVEAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLN-STS 754
             K G V +A    + L   D  +  + +   +  + K  R  KA ++F +M ++  +  
Sbjct: 269 FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNAD 328

Query: 755 AAAYQTVIGILCKFQEIELAESIMSGFIKSNLKP 787
            A Y  +IG LCK +++E+A S+     +S + P
Sbjct: 329 IALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351

BLAST of Lsi05G011060 vs. ExPASy TrEMBL
Match: A0A1S3CPK0 (pentatricopeptide repeat-containing protein At2g15820, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502781 PE=4 SV=1)

HSP 1 Score: 1459.5 bits (3777), Expect = 0.0e+00
Identity = 722/797 (90.59%), Postives = 756/797 (94.86%), Query Frame = 0

Query: 339  VFSMSIHTSAFSTVTLLRSLTLPFSPYHHYFRCPDYIVRTLFIPAYSVKGRRQLPRIPAF 398
            VFSMSI TSAFSTVTLLRSLTL  SPYHHYF  P++I+ TLFI +YSVK  RQLPRI AF
Sbjct: 2    VFSMSIPTSAFSTVTLLRSLTLSLSPYHHYFHYPNHIIPTLFISSYSVK-VRQLPRIRAF 61

Query: 399  ASSSFVEQLVYDRDSPFESEEHLSSPYSNGADGFQSENGFASADLKHLGTPALEVKELDE 458
            AS SFV+QLVYDRDSP ESEEHLSSPYSNG DGF  ENGFAS DLKHLGTPALEVKELDE
Sbjct: 62   ASGSFVKQLVYDRDSPSESEEHLSSPYSNGGDGFHFENGFASVDLKHLGTPALEVKELDE 121

Query: 459  LPEQWRRSKLAWLCKELPAQKPGTLIRLLNAQKKWLGQDDATYLTVHCLRIRENETAFRV 518
            LPEQWRRSKLAWLCKELPAQKPGT+IRLLNAQ+KW+GQDDATYLTVHCLRIRENETAFRV
Sbjct: 122  LPEQWRRSKLAWLCKELPAQKPGTVIRLLNAQRKWMGQDDATYLTVHCLRIRENETAFRV 181

Query: 519  YKWMLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYL 578
            YKWM+QQ WYRFDYAL+TKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYL
Sbjct: 182  YKWMMQQHWYRFDYALSTKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYL 241

Query: 579  SAPVQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNL 638
            SAPVQGCIEEASTIYNRMIQLGGYQPRLSLH+SLFRALMSKPGDLSKHHLKQAEFIYHNL
Sbjct: 242  SAPVQGCIEEASTIYNRMIQLGGYQPRLSLHSSLFRALMSKPGDLSKHHLKQAEFIYHNL 301

Query: 639  VTSGLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRASSKMG 698
            VTSGLELHKDIYGGLIWLHSYQDTIDKERIV LRKEMQQAGIKEE+EVLLSILRASSKMG
Sbjct: 302  VTSGLELHKDIYGGLIWLHSYQDTIDKERIVSLRKEMQQAGIKEEKEVLLSILRASSKMG 361

Query: 699  DVVEAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLNSTSAAAYQT 758
            DVVEAER WQKL Y DG+MP QAFVYKMEVY+KMG+PMKALEIFREMEQLNST+AAAYQT
Sbjct: 362  DVVEAERLWQKLKYLDGNMPYQAFVYKMEVYAKMGKPMKALEIFREMEQLNSTNAAAYQT 421

Query: 759  VIGILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEKC 818
            +IGILCKFQEIELAESIM+GFI+SNLKPL PAYVD+MNMFFNLSLHDKLELTFSQCLEKC
Sbjct: 422  IIGILCKFQEIELAESIMAGFIESNLKPLTPAYVDMMNMFFNLSLHDKLELTFSQCLEKC 481

Query: 819  KPNRTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAE 878
            KPNRTIYSIYLDSLVKVGN+ +AEEIF+QMETNGEIG+NARSCN+IL GYLLFGNY+KAE
Sbjct: 482  KPNRTIYSIYLDSLVKVGNLDRAEEIFSQMETNGEIGVNARSCNLILCGYLLFGNYMKAE 541

Query: 879  KIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILIGLLLGGLEIES 938
            KIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKP+SLKLSKEQREIL+GLLLGGLEIES
Sbjct: 542  KIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPMSLKLSKEQREILVGLLLGGLEIES 601

Query: 939  DEERKNHRIHFEFLKNSNSHSLLRRHIYEQYHEWLHPASKLSDGDIDIPYKFCTVSHSYF 998
            DEERKNHRI FEF KN  +HS+LRRHIYEQYH+WLH ASKL+DGDIDIPYKFCTVSHSYF
Sbjct: 602  DEERKNHRIQFEFHKNCKTHSVLRRHIYEQYHKWLHSASKLTDGDIDIPYKFCTVSHSYF 661

Query: 999  GFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVK 1058
            GFYADQFWPRG   IPNLIHRWLSPR LAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVK
Sbjct: 662  GFYADQFWPRGRQTIPNLIHRWLSPRALAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVK 721

Query: 1059 SLREKSMHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKDSLHADSLNLERVLNET 1118
            SLREKSMHCKVKRKG+MYWIGLLGSNATWFWKLIEPFILD LK+S  ADSLNL  VLNET
Sbjct: 722  SLREKSMHCKVKRKGSMYWIGLLGSNATWFWKLIEPFILDDLKESTQADSLNL-GVLNET 781

Query: 1119 ENINFDSQSDSVGEASN 1136
            ENINFDSQSDSV E SN
Sbjct: 782  ENINFDSQSDSVEETSN 796

BLAST of Lsi05G011060 vs. ExPASy TrEMBL
Match: A0A0A0LBL0 (LAGLIDADG_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G625100 PE=4 SV=1)

HSP 1 Score: 1448.3 bits (3748), Expect = 0.0e+00
Identity = 708/797 (88.83%), Postives = 754/797 (94.60%), Query Frame = 0

Query: 339  VFSMSIHTSAFSTVTLLRSLTLPFSPYHHYFRCPDYIVRTLFIPAYSVKGRRQLPRIPAF 398
            VFSMSI TSAFSTVT LRSLTL  SPYHHYF CP++I+ TLF+PAYSVK RRQLPRI AF
Sbjct: 2    VFSMSIPTSAFSTVTRLRSLTLSLSPYHHYFHCPNHIIPTLFLPAYSVKVRRQLPRIRAF 61

Query: 399  ASSSFVEQLVYDRDSPFESEEHLSSPYSNGADGFQSENGFASADLKHLGTPALEVKELDE 458
            AS SFV+QLVYD DSP ESEEHLSS +SNG DGF  ENGFAS DLKHLGTP LEVKELDE
Sbjct: 62   ASGSFVKQLVYDHDSPSESEEHLSSSFSNGGDGFHFENGFASVDLKHLGTPVLEVKELDE 121

Query: 459  LPEQWRRSKLAWLCKELPAQKPGTLIRLLNAQKKWLGQDDATYLTVHCLRIRENETAFRV 518
            LPEQWRRSK+AWLCKELPAQKPGT+IRLLNAQKKW+GQDDATYL VHCLRIRENETAFRV
Sbjct: 122  LPEQWRRSKVAWLCKELPAQKPGTVIRLLNAQKKWMGQDDATYLIVHCLRIRENETAFRV 181

Query: 519  YKWMLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYL 578
            YKWM+QQ WYRFDYAL+TKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYL
Sbjct: 182  YKWMMQQHWYRFDYALSTKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYL 241

Query: 579  SAPVQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNL 638
            SAPVQGCIEEASTIYNRMIQLGGYQPRLSLH+SLFRAL+SKPGDLSKHHLKQAEFIYHNL
Sbjct: 242  SAPVQGCIEEASTIYNRMIQLGGYQPRLSLHSSLFRALVSKPGDLSKHHLKQAEFIYHNL 301

Query: 639  VTSGLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRASSKMG 698
            VTSGLELHKD+YGGLIWLHSYQDTID+ERIV LRKEMQQAGIKEEREVLLSILRASSKMG
Sbjct: 302  VTSGLELHKDMYGGLIWLHSYQDTIDRERIVSLRKEMQQAGIKEEREVLLSILRASSKMG 361

Query: 699  DVVEAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLNSTSAAAYQT 758
            DV+EAE+ WQ+L Y DG+MPSQAFVYKMEVY+KMG+PMKALEIFREMEQLNST+AAAYQT
Sbjct: 362  DVMEAEKLWQELKYLDGNMPSQAFVYKMEVYAKMGKPMKALEIFREMEQLNSTNAAAYQT 421

Query: 759  VIGILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEKC 818
            +IGILCKFQ IELAESIM+GFI+SNLKPL PAYVDLMNMFFNL+L DKLELTFSQCLEKC
Sbjct: 422  IIGILCKFQVIELAESIMAGFIESNLKPLTPAYVDLMNMFFNLNLDDKLELTFSQCLEKC 481

Query: 819  KPNRTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAE 878
            KPNRTIYSIYLDSLVKVGN+ +AEEIF+QMETNGEIGINARSCNIIL GYLL GNY+KAE
Sbjct: 482  KPNRTIYSIYLDSLVKVGNLDRAEEIFSQMETNGEIGINARSCNIILRGYLLCGNYMKAE 541

Query: 879  KIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILIGLLLGGLEIES 938
            KIYDLMCQK+YDIDPPLMEKL+Y+LSLSRKEVKKP+SLKLSKEQREIL+GLLLGGLEIES
Sbjct: 542  KIYDLMCQKRYDIDPPLMEKLEYILSLSRKEVKKPMSLKLSKEQREILVGLLLGGLEIES 601

Query: 939  DEERKNHRIHFEFLKNSNSHSLLRRHIYEQYHEWLHPASKLSDGDIDIPYKFCTVSHSYF 998
            D+ERKNHRI FEF +N  +HS+LRRHIYEQYH+WLH ASKL+DGD+DIPYKFCTVSHSYF
Sbjct: 602  DDERKNHRIQFEFHRNCKTHSVLRRHIYEQYHKWLHSASKLTDGDVDIPYKFCTVSHSYF 661

Query: 999  GFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVK 1058
            GFYADQFWPRG  AIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVK
Sbjct: 662  GFYADQFWPRGRRAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVK 721

Query: 1059 SLREKSMHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKDSLHADSLNLERVLNET 1118
            SLREKS+HCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLK+S  ADSLNL  VLN +
Sbjct: 722  SLREKSIHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKESTQADSLNLVGVLNGS 781

Query: 1119 ENINFDSQSDSVGEASN 1136
            ENINFDS+SDSV E SN
Sbjct: 782  ENINFDSESDSVEETSN 798

BLAST of Lsi05G011060 vs. ExPASy TrEMBL
Match: A0A6J1KB64 (pentatricopeptide repeat-containing protein At2g15820, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493350 PE=4 SV=1)

HSP 1 Score: 1401.0 bits (3625), Expect = 0.0e+00
Identity = 689/794 (86.78%), Postives = 739/794 (93.07%), Query Frame = 0

Query: 342  MSIHTSAFSTVTLLRSLTLPFSPYHHYFRCPDYIVRTLFIPAYSVKGRRQLPRIPAFASS 401
            MSI TSAF+TVTLLRSLTLPFS  H++FRC +Y++R+L IP YS KGRRQLPRIPAFASS
Sbjct: 1    MSIRTSAFATVTLLRSLTLPFSQCHNHFRCWNYVIRSLSIPTYSAKGRRQLPRIPAFASS 60

Query: 402  SFVEQLVYDRDSPFESEEHLSSPYSNGADGFQSENGFASADLKHLGTPALEVKELDELPE 461
            S VE LVYDRDSP ESEE L SPYSNGA+       FASADLKHLG PALEVKELDELPE
Sbjct: 61   SSVEALVYDRDSPAESEEPLCSPYSNGAE------EFASADLKHLGAPALEVKELDELPE 120

Query: 462  QWRRSKLAWLCKELPAQKPGTLIRLLNAQKKWLGQDDATYLTVHCLRIRENETAFRVYKW 521
            QWRRSKLAWLCKELPA KPGTLIRLLNAQ+KW+ QDDA YL VHCLRIRENETAFRVYKW
Sbjct: 121  QWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYLIVHCLRIRENETAFRVYKW 180

Query: 522  MLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP 581
            M+QQ WYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP
Sbjct: 181  MMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP 240

Query: 582  VQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNLVTS 641
            VQGCIEEASTIYNRMIQLGGY PRLSLHNSLF+AL+SKPGDLSKHHLKQAEFIYHNLVT+
Sbjct: 241  VQGCIEEASTIYNRMIQLGGYPPRLSLHNSLFKALVSKPGDLSKHHLKQAEFIYHNLVTT 300

Query: 642  GLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRASSKMGDVV 701
            GLELHKDIYGGLIWLHSYQDT+DKERI+ LRKEMQQAGI+EEREVL+SILRASSK+GDV+
Sbjct: 301  GLELHKDIYGGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGDVM 360

Query: 702  EAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLNSTSAAAYQTVIG 761
            EAERSW K+  FDGSMPSQAFVYKMEVY+K+G PMKALEIFREMEQLNS S+AAYQT+IG
Sbjct: 361  EAERSWLKIKSFDGSMPSQAFVYKMEVYAKVGNPMKALEIFREMEQLNSISSAAYQTIIG 420

Query: 762  ILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN 821
            ILCKF+E+ LAES+M+GFIKSNLKPL PAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN
Sbjct: 421  ILCKFEEVTLAESVMAGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN 480

Query: 822  RTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAEKIY 881
            RTIYSIYL+SLVKVGN+ +AEEIF+QM+TNGEIG++ARSCNIILSGYLL G+YLKAEKIY
Sbjct: 481  RTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKIY 540

Query: 882  DLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILIGLLLGGLEIESDEE 941
            DLMCQKKYDIDPPLMEKLDYVLSLSRKE+KKPVSLKLSKEQREIL+GLLLGGLEIESDE 
Sbjct: 541  DLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVGLLLGGLEIESDEG 600

Query: 942  RKNHRIHFEFLKNSNSHSLLRRHIYEQYHEWLHPASKLSDGDIDIPYKFCTVSHSYFGFY 1001
            RKNHRI FEF ++ ++HS LRRH+YEQYHEWLHPASKLSD D DIPYKFCTVSHSYFGFY
Sbjct: 601  RKNHRIQFEFHEDCSTHSCLRRHVYEQYHEWLHPASKLSDSDTDIPYKFCTVSHSYFGFY 660

Query: 1002 ADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVKSLR 1061
            ADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCR SSGD +LKLKGS EGV KIVKSLR
Sbjct: 661  ADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKGSREGVVKIVKSLR 720

Query: 1062 EKSMHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKDSLHADSLNLERVLNETENI 1121
            EKSM CKVKRKG +YWIGLLGSNATWFWKLIEPFILD LKDSL AD+LNLE+ +NET NI
Sbjct: 721  EKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDSLQADNLNLEKAVNETYNI 780

Query: 1122 NFDSQSDSVGEASN 1136
            NFDSQSDS  EAS+
Sbjct: 781  NFDSQSDSDEEASS 788

BLAST of Lsi05G011060 vs. ExPASy TrEMBL
Match: A0A6J1GB98 (pentatricopeptide repeat-containing protein At2g15820, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452602 PE=4 SV=1)

HSP 1 Score: 1401.0 bits (3625), Expect = 0.0e+00
Identity = 688/794 (86.65%), Postives = 735/794 (92.57%), Query Frame = 0

Query: 342  MSIHTSAFSTVTLLRSLTLPFSPYHHYFRCPDYIVRTLFIPAYSVKGRRQLPRIPAFASS 401
            MSI TSAF+TVTLLRSLTLPFS  HH+FRC +Y++R+L IP YS KGRRQLPRIPAFASS
Sbjct: 1    MSIRTSAFATVTLLRSLTLPFSQCHHHFRCRNYVIRSLCIPTYSAKGRRQLPRIPAFASS 60

Query: 402  SFVEQLVYDRDSPFESEEHLSSPYSNGADGFQSENGFASADLKHLGTPALEVKELDELPE 461
            S VE LVYDRDSP ESEE L SPYS GA+      GFASADLKHLG PALEVKELDELPE
Sbjct: 61   SSVEALVYDRDSPAESEEPLCSPYSTGAE------GFASADLKHLGAPALEVKELDELPE 120

Query: 462  QWRRSKLAWLCKELPAQKPGTLIRLLNAQKKWLGQDDATYLTVHCLRIRENETAFRVYKW 521
            QWRRSKLAWLCKELPAQKPGTLIRLLNAQ+KW+ QDDA YL VHCLRIRENETAFRVYKW
Sbjct: 121  QWRRSKLAWLCKELPAQKPGTLIRLLNAQRKWMKQDDAAYLIVHCLRIRENETAFRVYKW 180

Query: 522  MLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP 581
            M+QQ WYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP
Sbjct: 181  MMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP 240

Query: 582  VQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNLVTS 641
            +QGCIEE+STIYNRMIQLGGYQPRLSLHNSLF+AL+SKPGDLSKHHLKQAEFIYHNL T+
Sbjct: 241  IQGCIEESSTIYNRMIQLGGYQPRLSLHNSLFKALVSKPGDLSKHHLKQAEFIYHNLATT 300

Query: 642  GLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRASSKMGDVV 701
            GLELHKDIYGGLIWLHSYQDT+DKERI+ LRKEM QAGI+EEREVL+SILRASSK+GDV+
Sbjct: 301  GLELHKDIYGGLIWLHSYQDTVDKERIMSLRKEMHQAGIEEEREVLVSILRASSKLGDVM 360

Query: 702  EAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLNSTSAAAYQTVIG 761
            EAERSW KL  FDGSMPSQAFVYKMEVY+K+G PMKA EIFREMEQLNS SAAAYQT+IG
Sbjct: 361  EAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREMEQLNSISAAAYQTIIG 420

Query: 762  ILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN 821
            ILCKF+E+ LAES+M GFIKSNLKPL PAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN
Sbjct: 421  ILCKFEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN 480

Query: 822  RTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAEKIY 881
            RTIYSIYL+SLVKVGN+ +AEEIF+QM+TNGEIG++ARSCNIILSGYLL G+YLKAEKIY
Sbjct: 481  RTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKIY 540

Query: 882  DLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILIGLLLGGLEIESDEE 941
            DLMCQKKYDIDPPLMEKLDYVLSLSRKE+KKPVSLKLSKEQREIL+GLLLGGLEIESDE 
Sbjct: 541  DLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVGLLLGGLEIESDEG 600

Query: 942  RKNHRIHFEFLKNSNSHSLLRRHIYEQYHEWLHPASKLSDGDIDIPYKFCTVSHSYFGFY 1001
            RKNHRI FEF ++ ++HS LRRHI+EQYHEWLHPASKLSD D DIPYKFCTVSHSYFGFY
Sbjct: 601  RKNHRIQFEFHEDCSTHSRLRRHIHEQYHEWLHPASKLSDSDTDIPYKFCTVSHSYFGFY 660

Query: 1002 ADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVKSLR 1061
            ADQFWPRGHP IPNLIHRWLSPRVLAYWYMYGGCR SSGD +LKLKGS EGV KIVKSLR
Sbjct: 661  ADQFWPRGHPVIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKGSREGVAKIVKSLR 720

Query: 1062 EKSMHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKDSLHADSLNLERVLNETENI 1121
            EKSM CKVKRKG +YWIGLLGSNATWFWKLIEPFILD LKDSL ADSLN+E+  NET NI
Sbjct: 721  EKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDSLQADSLNMEKAANETYNI 780

Query: 1122 NFDSQSDSVGEASN 1136
            NFDSQSDS  EAS+
Sbjct: 781  NFDSQSDSDEEASS 788

BLAST of Lsi05G011060 vs. ExPASy TrEMBL
Match: D7TPM6 (LAGLIDADG_2 domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_03s0063g00900 PE=4 SV=1)

HSP 1 Score: 1088.9 bits (2815), Expect = 0.0e+00
Identity = 550/801 (68.66%), Postives = 647/801 (80.77%), Query Frame = 0

Query: 344  IHTSAFSTVTLLRSLTLPFSPYHHYFRCP---DYIVRTLFIPAYSVKGRR-QLPRIPAFA 403
            + T   S+++LLRSL+      HH F C        ++ F P  +   R   L R P  A
Sbjct: 1    MRTPVLSSLSLLRSLS---PSLHHRFLCSLSLSNYSKSFFFPLPTTNIRHSSLFRRPPLA 60

Query: 404  S--SSFVEQLVYDRDSPFESEEHLSSPYSNGADGFQSENG--FASADLKHLGTPALEVKE 463
               SSFVEQ+V       ESE   +  +S G +G   + G  F S DL+HL +P+LEVKE
Sbjct: 61   KPLSSFVEQVV------GESERDENEGFSRGGEGESFDFGVAFGSTDLRHLSSPSLEVKE 120

Query: 464  LDELPEQWRRSKLAWLCKELPAQKPGTLIRLLNAQKKWLGQDDATYLTVHCLRIRENETA 523
            L+ELPEQWRRSKLAWLCKELPA KP TLIR+LNAQKKW+ Q+DATY+ VHC+RIRENET 
Sbjct: 121  LEELPEQWRRSKLAWLCKELPAHKPATLIRILNAQKKWVRQEDATYIAVHCMRIRENETG 180

Query: 524  FRVYKWMLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIV 583
            FRVYKWM+QQ W++FD+ALATKLADYMGKERKFSKCRE+FDDII QG VP ESTFHILI+
Sbjct: 181  FRVYKWMMQQHWFQFDFALATKLADYMGKERKFSKCREIFDDIIKQGLVPCESTFHILII 240

Query: 584  AYLSAPVQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFIY 643
            AYLSA VQGC++EA  IYNRMIQLGGYQPRLSLHNSLFRAL+ +PG  SK+ LKQAEFI+
Sbjct: 241  AYLSASVQGCLDEACGIYNRMIQLGGYQPRLSLHNSLFRALVGQPGGSSKYFLKQAEFIF 300

Query: 644  HNLVTSGLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRASS 703
            HNLVT G E+HKD+YGGLIWLHSYQDTID+ERI  LR+EMQ AGI+E R+VLLSILRA S
Sbjct: 301  HNLVTFGFEIHKDVYGGLIWLHSYQDTIDRERIASLREEMQLAGIEESRDVLLSILRACS 360

Query: 704  KMGDVVEAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREM-EQLNSTSAA 763
            K GDV EAE++W KL + D ++PSQ FVY+MEVY+K+G PMK+LEIFREM EQL STS  
Sbjct: 361  KEGDVEEAEKTWLKLLHSDCAIPSQGFVYRMEVYAKVGEPMKSLEIFREMQEQLGSTSVV 420

Query: 764  AYQTVIGILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQC 823
            AY  +I +L K QEIEL ES+M+ FI S +KPLMP+Y+DLMNM+FNLSLHDKLE  F +C
Sbjct: 421  AYHKIIEVLSKAQEIELVESLMTEFINSGMKPLMPSYIDLMNMYFNLSLHDKLEAAFYEC 480

Query: 824  LEKCKPNRTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNY 883
            LEKC+PNR IY+IY+DSLV++GN+ KAEEIFNQM +NG IG+N +SCN ILSGYL  G+Y
Sbjct: 481  LEKCRPNRAIYNIYMDSLVQIGNLDKAEEIFNQMYSNGAIGVNTKSCNTILSGYLSCGDY 540

Query: 884  LKAEKIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILIGLLLGGL 943
            LKAEKIYDLMCQKKY ID PLMEKLDYVLSLSRK VK+PVSLKLSKEQREILIGLLLGGL
Sbjct: 541  LKAEKIYDLMCQKKYAIDAPLMEKLDYVLSLSRKVVKRPVSLKLSKEQREILIGLLLGGL 600

Query: 944  EIESDEERKNHRIHFEFLKNSNSHSLLRRHIYEQYHEWLHPASKLSDGDIDIPYKFCTVS 1003
            ++ESDEERKNH I+FEF +NS +HS+LRRHI+EQYHEWL+ +SKLSD + D+PYKF T+S
Sbjct: 601  QMESDEERKNHVIYFEFNENSGAHSVLRRHIHEQYHEWLNSSSKLSDDNDDVPYKFSTIS 660

Query: 1004 HSYFGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVE 1063
            HSYFGFYADQFWPRG P IP LIHRWLSPRVLAYWYMYGG RTSSGDILLKLKGS EGVE
Sbjct: 661  HSYFGFYADQFWPRGRPMIPKLIHRWLSPRVLAYWYMYGGHRTSSGDILLKLKGSREGVE 720

Query: 1064 KIVKSLREKSMHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKDSLHADSLNLERV 1123
            K+V++L+ +SM C+VKRKG ++WIGLLGSN+TWFWKLIEP+ILD +KD + A   N    
Sbjct: 721  KVVRTLKAQSMDCRVKRKGTVFWIGLLGSNSTWFWKLIEPYILDDVKDFVKAGCQN---- 780

Query: 1124 LNETENINFDSQSDSVGEASN 1136
                  I+F S SD+   A++
Sbjct: 781  -----TISFGSGSDTDENAAD 783

BLAST of Lsi05G011060 vs. NCBI nr
Match: XP_038887990.1 (pentatricopeptide repeat-containing protein At2g15820, chloroplastic [Benincasa hispida])

HSP 1 Score: 1465.7 bits (3793), Expect = 0.0e+00
Identity = 724/794 (91.18%), Postives = 760/794 (95.72%), Query Frame = 0

Query: 342  MSIHTSAFSTVTLLRSLTLPFSPYHHYFRCPDYIVRTLFIPAYSVKGRRQLPRIPAFASS 401
            MSIHTSAFS+VTLLRS +L  SPYHHYFRCP++IVRT+FIP YSVKG++QLPRIP+FASS
Sbjct: 1    MSIHTSAFSSVTLLRSPSLSLSPYHHYFRCPNHIVRTIFIPIYSVKGQQQLPRIPSFASS 60

Query: 402  SFVEQLVYDRDSPFESEEHLSSPYSNGADGFQSENGFASADLKHLGTPALEVKELDELPE 461
            S VEQLVYDRDS FESEEHLSSPYSNGAD      GFASADLKHL  PALEVKELDELP+
Sbjct: 61   SSVEQLVYDRDSLFESEEHLSSPYSNGAD------GFASADLKHLEMPALEVKELDELPD 120

Query: 462  QWRRSKLAWLCKELPAQKPGTLIRLLNAQKKWLGQDDATYLTVHCLRIRENETAFRVYKW 521
            QWRRSKLAWLCKELPAQKPGTLIRLLNAQ+KW+ QDDATYLTVHCLRIRENETAFRVYKW
Sbjct: 121  QWRRSKLAWLCKELPAQKPGTLIRLLNAQRKWMRQDDATYLTVHCLRIRENETAFRVYKW 180

Query: 522  MLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP 581
            M+QQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP
Sbjct: 181  MMQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP 240

Query: 582  VQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNLVTS 641
            VQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRAL SKPGDLSKHHLKQAEFIYHNLVTS
Sbjct: 241  VQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALTSKPGDLSKHHLKQAEFIYHNLVTS 300

Query: 642  GLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRASSKMGDVV 701
            GLE+HKDI GGLIWLHSYQDTIDKERIV LRKEMQQAGIKEEREVLLSILRASSKMG+V+
Sbjct: 301  GLEVHKDICGGLIWLHSYQDTIDKERIVSLRKEMQQAGIKEEREVLLSILRASSKMGNVM 360

Query: 702  EAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLNSTSAAAYQTVIG 761
            EAERSWQKL  FDG+MPSQAFVYKMEVY+KMG+PMKALEIFREMEQLNS +AAAY+T+IG
Sbjct: 361  EAERSWQKLKDFDGNMPSQAFVYKMEVYAKMGKPMKALEIFREMEQLNSANAAAYRTIIG 420

Query: 762  ILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN 821
            ILCKFQ+IELAESIM GFIKSNLKPLMPAYVDLMNMFFNLSLH+KLEL FSQCLEKCKP+
Sbjct: 421  ILCKFQDIELAESIMKGFIKSNLKPLMPAYVDLMNMFFNLSLHNKLELIFSQCLEKCKPD 480

Query: 822  RTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAEKIY 881
            RTIYSIYLDSLVKVGN+ +AEEIF+QMETNGEIGINARSCNIILSGYLLFGNYLKAEKIY
Sbjct: 481  RTIYSIYLDSLVKVGNLDRAEEIFSQMETNGEIGINARSCNIILSGYLLFGNYLKAEKIY 540

Query: 882  DLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILIGLLLGGLEIESDEE 941
            DLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREIL+GLLLGG+EIESDEE
Sbjct: 541  DLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILVGLLLGGVEIESDEE 600

Query: 942  RKNHRIHFEFLKNSNSHSLLRRHIYEQYHEWLHPASKLSDGDIDIPYKFCTVSHSYFGFY 1001
            RKNHRI FEF +N N+HSLLRRHIYEQYHEWLH ASKL+DGDIDIPYKFCTVSHSYFGFY
Sbjct: 601  RKNHRIQFEFQQNCNTHSLLRRHIYEQYHEWLHSASKLNDGDIDIPYKFCTVSHSYFGFY 660

Query: 1002 ADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVKSLR 1061
            ADQFWP+GHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGS EGVEKIVKSLR
Sbjct: 661  ADQFWPQGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSREGVEKIVKSLR 720

Query: 1062 EKSMHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKDSLHADSLNLERVLNETENI 1121
            EKSM CKVKRKG+MYWIGLLG+NATWFWKL+EPFILDYLKDSL ADS NL RVLNETENI
Sbjct: 721  EKSMQCKVKRKGSMYWIGLLGNNATWFWKLVEPFILDYLKDSLEADSPNLGRVLNETENI 780

Query: 1122 NFDSQSDSVGEASN 1136
            NFDSQSDSV EASN
Sbjct: 781  NFDSQSDSVEEASN 788

BLAST of Lsi05G011060 vs. NCBI nr
Match: XP_008465080.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g15820, chloroplastic [Cucumis melo])

HSP 1 Score: 1459.5 bits (3777), Expect = 0.0e+00
Identity = 722/797 (90.59%), Postives = 756/797 (94.86%), Query Frame = 0

Query: 339  VFSMSIHTSAFSTVTLLRSLTLPFSPYHHYFRCPDYIVRTLFIPAYSVKGRRQLPRIPAF 398
            VFSMSI TSAFSTVTLLRSLTL  SPYHHYF  P++I+ TLFI +YSVK  RQLPRI AF
Sbjct: 2    VFSMSIPTSAFSTVTLLRSLTLSLSPYHHYFHYPNHIIPTLFISSYSVK-VRQLPRIRAF 61

Query: 399  ASSSFVEQLVYDRDSPFESEEHLSSPYSNGADGFQSENGFASADLKHLGTPALEVKELDE 458
            AS SFV+QLVYDRDSP ESEEHLSSPYSNG DGF  ENGFAS DLKHLGTPALEVKELDE
Sbjct: 62   ASGSFVKQLVYDRDSPSESEEHLSSPYSNGGDGFHFENGFASVDLKHLGTPALEVKELDE 121

Query: 459  LPEQWRRSKLAWLCKELPAQKPGTLIRLLNAQKKWLGQDDATYLTVHCLRIRENETAFRV 518
            LPEQWRRSKLAWLCKELPAQKPGT+IRLLNAQ+KW+GQDDATYLTVHCLRIRENETAFRV
Sbjct: 122  LPEQWRRSKLAWLCKELPAQKPGTVIRLLNAQRKWMGQDDATYLTVHCLRIRENETAFRV 181

Query: 519  YKWMLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYL 578
            YKWM+QQ WYRFDYAL+TKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYL
Sbjct: 182  YKWMMQQHWYRFDYALSTKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYL 241

Query: 579  SAPVQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNL 638
            SAPVQGCIEEASTIYNRMIQLGGYQPRLSLH+SLFRALMSKPGDLSKHHLKQAEFIYHNL
Sbjct: 242  SAPVQGCIEEASTIYNRMIQLGGYQPRLSLHSSLFRALMSKPGDLSKHHLKQAEFIYHNL 301

Query: 639  VTSGLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRASSKMG 698
            VTSGLELHKDIYGGLIWLHSYQDTIDKERIV LRKEMQQAGIKEE+EVLLSILRASSKMG
Sbjct: 302  VTSGLELHKDIYGGLIWLHSYQDTIDKERIVSLRKEMQQAGIKEEKEVLLSILRASSKMG 361

Query: 699  DVVEAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLNSTSAAAYQT 758
            DVVEAER WQKL Y DG+MP QAFVYKMEVY+KMG+PMKALEIFREMEQLNST+AAAYQT
Sbjct: 362  DVVEAERLWQKLKYLDGNMPYQAFVYKMEVYAKMGKPMKALEIFREMEQLNSTNAAAYQT 421

Query: 759  VIGILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEKC 818
            +IGILCKFQEIELAESIM+GFI+SNLKPL PAYVD+MNMFFNLSLHDKLELTFSQCLEKC
Sbjct: 422  IIGILCKFQEIELAESIMAGFIESNLKPLTPAYVDMMNMFFNLSLHDKLELTFSQCLEKC 481

Query: 819  KPNRTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAE 878
            KPNRTIYSIYLDSLVKVGN+ +AEEIF+QMETNGEIG+NARSCN+IL GYLLFGNY+KAE
Sbjct: 482  KPNRTIYSIYLDSLVKVGNLDRAEEIFSQMETNGEIGVNARSCNLILCGYLLFGNYMKAE 541

Query: 879  KIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILIGLLLGGLEIES 938
            KIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKP+SLKLSKEQREIL+GLLLGGLEIES
Sbjct: 542  KIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPMSLKLSKEQREILVGLLLGGLEIES 601

Query: 939  DEERKNHRIHFEFLKNSNSHSLLRRHIYEQYHEWLHPASKLSDGDIDIPYKFCTVSHSYF 998
            DEERKNHRI FEF KN  +HS+LRRHIYEQYH+WLH ASKL+DGDIDIPYKFCTVSHSYF
Sbjct: 602  DEERKNHRIQFEFHKNCKTHSVLRRHIYEQYHKWLHSASKLTDGDIDIPYKFCTVSHSYF 661

Query: 999  GFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVK 1058
            GFYADQFWPRG   IPNLIHRWLSPR LAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVK
Sbjct: 662  GFYADQFWPRGRQTIPNLIHRWLSPRALAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVK 721

Query: 1059 SLREKSMHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKDSLHADSLNLERVLNET 1118
            SLREKSMHCKVKRKG+MYWIGLLGSNATWFWKLIEPFILD LK+S  ADSLNL  VLNET
Sbjct: 722  SLREKSMHCKVKRKGSMYWIGLLGSNATWFWKLIEPFILDDLKESTQADSLNL-GVLNET 781

Query: 1119 ENINFDSQSDSVGEASN 1136
            ENINFDSQSDSV E SN
Sbjct: 782  ENINFDSQSDSVEETSN 796

BLAST of Lsi05G011060 vs. NCBI nr
Match: XP_004152074.2 (pentatricopeptide repeat-containing protein At2g15820, chloroplastic [Cucumis sativus] >KGN58344.1 hypothetical protein Csa_017589 [Cucumis sativus])

HSP 1 Score: 1448.3 bits (3748), Expect = 0.0e+00
Identity = 708/797 (88.83%), Postives = 754/797 (94.60%), Query Frame = 0

Query: 339  VFSMSIHTSAFSTVTLLRSLTLPFSPYHHYFRCPDYIVRTLFIPAYSVKGRRQLPRIPAF 398
            VFSMSI TSAFSTVT LRSLTL  SPYHHYF CP++I+ TLF+PAYSVK RRQLPRI AF
Sbjct: 2    VFSMSIPTSAFSTVTRLRSLTLSLSPYHHYFHCPNHIIPTLFLPAYSVKVRRQLPRIRAF 61

Query: 399  ASSSFVEQLVYDRDSPFESEEHLSSPYSNGADGFQSENGFASADLKHLGTPALEVKELDE 458
            AS SFV+QLVYD DSP ESEEHLSS +SNG DGF  ENGFAS DLKHLGTP LEVKELDE
Sbjct: 62   ASGSFVKQLVYDHDSPSESEEHLSSSFSNGGDGFHFENGFASVDLKHLGTPVLEVKELDE 121

Query: 459  LPEQWRRSKLAWLCKELPAQKPGTLIRLLNAQKKWLGQDDATYLTVHCLRIRENETAFRV 518
            LPEQWRRSK+AWLCKELPAQKPGT+IRLLNAQKKW+GQDDATYL VHCLRIRENETAFRV
Sbjct: 122  LPEQWRRSKVAWLCKELPAQKPGTVIRLLNAQKKWMGQDDATYLIVHCLRIRENETAFRV 181

Query: 519  YKWMLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYL 578
            YKWM+QQ WYRFDYAL+TKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYL
Sbjct: 182  YKWMMQQHWYRFDYALSTKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYL 241

Query: 579  SAPVQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNL 638
            SAPVQGCIEEASTIYNRMIQLGGYQPRLSLH+SLFRAL+SKPGDLSKHHLKQAEFIYHNL
Sbjct: 242  SAPVQGCIEEASTIYNRMIQLGGYQPRLSLHSSLFRALVSKPGDLSKHHLKQAEFIYHNL 301

Query: 639  VTSGLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRASSKMG 698
            VTSGLELHKD+YGGLIWLHSYQDTID+ERIV LRKEMQQAGIKEEREVLLSILRASSKMG
Sbjct: 302  VTSGLELHKDMYGGLIWLHSYQDTIDRERIVSLRKEMQQAGIKEEREVLLSILRASSKMG 361

Query: 699  DVVEAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLNSTSAAAYQT 758
            DV+EAE+ WQ+L Y DG+MPSQAFVYKMEVY+KMG+PMKALEIFREMEQLNST+AAAYQT
Sbjct: 362  DVMEAEKLWQELKYLDGNMPSQAFVYKMEVYAKMGKPMKALEIFREMEQLNSTNAAAYQT 421

Query: 759  VIGILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEKC 818
            +IGILCKFQ IELAESIM+GFI+SNLKPL PAYVDLMNMFFNL+L DKLELTFSQCLEKC
Sbjct: 422  IIGILCKFQVIELAESIMAGFIESNLKPLTPAYVDLMNMFFNLNLDDKLELTFSQCLEKC 481

Query: 819  KPNRTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAE 878
            KPNRTIYSIYLDSLVKVGN+ +AEEIF+QMETNGEIGINARSCNIIL GYLL GNY+KAE
Sbjct: 482  KPNRTIYSIYLDSLVKVGNLDRAEEIFSQMETNGEIGINARSCNIILRGYLLCGNYMKAE 541

Query: 879  KIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILIGLLLGGLEIES 938
            KIYDLMCQK+YDIDPPLMEKL+Y+LSLSRKEVKKP+SLKLSKEQREIL+GLLLGGLEIES
Sbjct: 542  KIYDLMCQKRYDIDPPLMEKLEYILSLSRKEVKKPMSLKLSKEQREILVGLLLGGLEIES 601

Query: 939  DEERKNHRIHFEFLKNSNSHSLLRRHIYEQYHEWLHPASKLSDGDIDIPYKFCTVSHSYF 998
            D+ERKNHRI FEF +N  +HS+LRRHIYEQYH+WLH ASKL+DGD+DIPYKFCTVSHSYF
Sbjct: 602  DDERKNHRIQFEFHRNCKTHSVLRRHIYEQYHKWLHSASKLTDGDVDIPYKFCTVSHSYF 661

Query: 999  GFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVK 1058
            GFYADQFWPRG  AIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVK
Sbjct: 662  GFYADQFWPRGRRAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVK 721

Query: 1059 SLREKSMHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKDSLHADSLNLERVLNET 1118
            SLREKS+HCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLK+S  ADSLNL  VLN +
Sbjct: 722  SLREKSIHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKESTQADSLNLVGVLNGS 781

Query: 1119 ENINFDSQSDSVGEASN 1136
            ENINFDS+SDSV E SN
Sbjct: 782  ENINFDSESDSVEETSN 798

BLAST of Lsi05G011060 vs. NCBI nr
Match: XP_022998786.1 (pentatricopeptide repeat-containing protein At2g15820, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1401.0 bits (3625), Expect = 0.0e+00
Identity = 689/794 (86.78%), Postives = 739/794 (93.07%), Query Frame = 0

Query: 342  MSIHTSAFSTVTLLRSLTLPFSPYHHYFRCPDYIVRTLFIPAYSVKGRRQLPRIPAFASS 401
            MSI TSAF+TVTLLRSLTLPFS  H++FRC +Y++R+L IP YS KGRRQLPRIPAFASS
Sbjct: 1    MSIRTSAFATVTLLRSLTLPFSQCHNHFRCWNYVIRSLSIPTYSAKGRRQLPRIPAFASS 60

Query: 402  SFVEQLVYDRDSPFESEEHLSSPYSNGADGFQSENGFASADLKHLGTPALEVKELDELPE 461
            S VE LVYDRDSP ESEE L SPYSNGA+       FASADLKHLG PALEVKELDELPE
Sbjct: 61   SSVEALVYDRDSPAESEEPLCSPYSNGAE------EFASADLKHLGAPALEVKELDELPE 120

Query: 462  QWRRSKLAWLCKELPAQKPGTLIRLLNAQKKWLGQDDATYLTVHCLRIRENETAFRVYKW 521
            QWRRSKLAWLCKELPA KPGTLIRLLNAQ+KW+ QDDA YL VHCLRIRENETAFRVYKW
Sbjct: 121  QWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYLIVHCLRIRENETAFRVYKW 180

Query: 522  MLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP 581
            M+QQ WYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP
Sbjct: 181  MMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP 240

Query: 582  VQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNLVTS 641
            VQGCIEEASTIYNRMIQLGGY PRLSLHNSLF+AL+SKPGDLSKHHLKQAEFIYHNLVT+
Sbjct: 241  VQGCIEEASTIYNRMIQLGGYPPRLSLHNSLFKALVSKPGDLSKHHLKQAEFIYHNLVTT 300

Query: 642  GLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRASSKMGDVV 701
            GLELHKDIYGGLIWLHSYQDT+DKERI+ LRKEMQQAGI+EEREVL+SILRASSK+GDV+
Sbjct: 301  GLELHKDIYGGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGDVM 360

Query: 702  EAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLNSTSAAAYQTVIG 761
            EAERSW K+  FDGSMPSQAFVYKMEVY+K+G PMKALEIFREMEQLNS S+AAYQT+IG
Sbjct: 361  EAERSWLKIKSFDGSMPSQAFVYKMEVYAKVGNPMKALEIFREMEQLNSISSAAYQTIIG 420

Query: 762  ILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN 821
            ILCKF+E+ LAES+M+GFIKSNLKPL PAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN
Sbjct: 421  ILCKFEEVTLAESVMAGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN 480

Query: 822  RTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAEKIY 881
            RTIYSIYL+SLVKVGN+ +AEEIF+QM+TNGEIG++ARSCNIILSGYLL G+YLKAEKIY
Sbjct: 481  RTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKIY 540

Query: 882  DLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILIGLLLGGLEIESDEE 941
            DLMCQKKYDIDPPLMEKLDYVLSLSRKE+KKPVSLKLSKEQREIL+GLLLGGLEIESDE 
Sbjct: 541  DLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVGLLLGGLEIESDEG 600

Query: 942  RKNHRIHFEFLKNSNSHSLLRRHIYEQYHEWLHPASKLSDGDIDIPYKFCTVSHSYFGFY 1001
            RKNHRI FEF ++ ++HS LRRH+YEQYHEWLHPASKLSD D DIPYKFCTVSHSYFGFY
Sbjct: 601  RKNHRIQFEFHEDCSTHSCLRRHVYEQYHEWLHPASKLSDSDTDIPYKFCTVSHSYFGFY 660

Query: 1002 ADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVKSLR 1061
            ADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCR SSGD +LKLKGS EGV KIVKSLR
Sbjct: 661  ADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKGSREGVVKIVKSLR 720

Query: 1062 EKSMHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKDSLHADSLNLERVLNETENI 1121
            EKSM CKVKRKG +YWIGLLGSNATWFWKLIEPFILD LKDSL AD+LNLE+ +NET NI
Sbjct: 721  EKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDSLQADNLNLEKAVNETYNI 780

Query: 1122 NFDSQSDSVGEASN 1136
            NFDSQSDS  EAS+
Sbjct: 781  NFDSQSDSDEEASS 788

BLAST of Lsi05G011060 vs. NCBI nr
Match: XP_022949171.1 (pentatricopeptide repeat-containing protein At2g15820, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1401.0 bits (3625), Expect = 0.0e+00
Identity = 688/794 (86.65%), Postives = 735/794 (92.57%), Query Frame = 0

Query: 342  MSIHTSAFSTVTLLRSLTLPFSPYHHYFRCPDYIVRTLFIPAYSVKGRRQLPRIPAFASS 401
            MSI TSAF+TVTLLRSLTLPFS  HH+FRC +Y++R+L IP YS KGRRQLPRIPAFASS
Sbjct: 1    MSIRTSAFATVTLLRSLTLPFSQCHHHFRCRNYVIRSLCIPTYSAKGRRQLPRIPAFASS 60

Query: 402  SFVEQLVYDRDSPFESEEHLSSPYSNGADGFQSENGFASADLKHLGTPALEVKELDELPE 461
            S VE LVYDRDSP ESEE L SPYS GA+      GFASADLKHLG PALEVKELDELPE
Sbjct: 61   SSVEALVYDRDSPAESEEPLCSPYSTGAE------GFASADLKHLGAPALEVKELDELPE 120

Query: 462  QWRRSKLAWLCKELPAQKPGTLIRLLNAQKKWLGQDDATYLTVHCLRIRENETAFRVYKW 521
            QWRRSKLAWLCKELPAQKPGTLIRLLNAQ+KW+ QDDA YL VHCLRIRENETAFRVYKW
Sbjct: 121  QWRRSKLAWLCKELPAQKPGTLIRLLNAQRKWMKQDDAAYLIVHCLRIRENETAFRVYKW 180

Query: 522  MLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP 581
            M+QQ WYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP
Sbjct: 181  MMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAP 240

Query: 582  VQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNLVTS 641
            +QGCIEE+STIYNRMIQLGGYQPRLSLHNSLF+AL+SKPGDLSKHHLKQAEFIYHNL T+
Sbjct: 241  IQGCIEESSTIYNRMIQLGGYQPRLSLHNSLFKALVSKPGDLSKHHLKQAEFIYHNLATT 300

Query: 642  GLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRASSKMGDVV 701
            GLELHKDIYGGLIWLHSYQDT+DKERI+ LRKEM QAGI+EEREVL+SILRASSK+GDV+
Sbjct: 301  GLELHKDIYGGLIWLHSYQDTVDKERIMSLRKEMHQAGIEEEREVLVSILRASSKLGDVM 360

Query: 702  EAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLNSTSAAAYQTVIG 761
            EAERSW KL  FDGSMPSQAFVYKMEVY+K+G PMKA EIFREMEQLNS SAAAYQT+IG
Sbjct: 361  EAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREMEQLNSISAAAYQTIIG 420

Query: 762  ILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN 821
            ILCKF+E+ LAES+M GFIKSNLKPL PAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN
Sbjct: 421  ILCKFEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPN 480

Query: 822  RTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAEKIY 881
            RTIYSIYL+SLVKVGN+ +AEEIF+QM+TNGEIG++ARSCNIILSGYLL G+YLKAEKIY
Sbjct: 481  RTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKIY 540

Query: 882  DLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPVSLKLSKEQREILIGLLLGGLEIESDEE 941
            DLMCQKKYDIDPPLMEKLDYVLSLSRKE+KKPVSLKLSKEQREIL+GLLLGGLEIESDE 
Sbjct: 541  DLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVGLLLGGLEIESDEG 600

Query: 942  RKNHRIHFEFLKNSNSHSLLRRHIYEQYHEWLHPASKLSDGDIDIPYKFCTVSHSYFGFY 1001
            RKNHRI FEF ++ ++HS LRRHI+EQYHEWLHPASKLSD D DIPYKFCTVSHSYFGFY
Sbjct: 601  RKNHRIQFEFHEDCSTHSRLRRHIHEQYHEWLHPASKLSDSDTDIPYKFCTVSHSYFGFY 660

Query: 1002 ADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVKSLR 1061
            ADQFWPRGHP IPNLIHRWLSPRVLAYWYMYGGCR SSGD +LKLKGS EGV KIVKSLR
Sbjct: 661  ADQFWPRGHPVIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKGSREGVAKIVKSLR 720

Query: 1062 EKSMHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKDSLHADSLNLERVLNETENI 1121
            EKSM CKVKRKG +YWIGLLGSNATWFWKLIEPFILD LKDSL ADSLN+E+  NET NI
Sbjct: 721  EKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDSLQADSLNMEKAANETYNI 780

Query: 1122 NFDSQSDSVGEASN 1136
            NFDSQSDS  EAS+
Sbjct: 781  NFDSQSDSDEEASS 788

BLAST of Lsi05G011060 vs. TAIR 10
Match: AT2G15820.1 (endonucleases )

HSP 1 Score: 895.6 bits (2313), Expect = 4.2e-260
Identity = 458/833 (54.98%), Postives = 616/833 (73.95%), Query Frame = 0

Query: 320  NSALSLPTLHFLSNRNPPSVFSMSIHTSAFSTVTLLRSLTLPFSPYHHYFRCPDYIVRTL 379
            +S +S+ T +  S  + P++ +        S+ TL RSL+  FS   H        +R L
Sbjct: 30   SSTVSVTTFNISSLSSNPNIIN--------SSSTLFRSLS--FSLIRHRSSYSRRSLRRL 89

Query: 380  FIPAYSVKGRRQLPRIPAFASSSFVEQLVYDRDSPFESE----EHLSSPYSNGADGFQSE 439
             I  ++V G     +   F+ SS     ++  +S  +      EHL+   +   +G    
Sbjct: 90   SI--HTVHGN----KTQFFSHSSTRTPPLFTANSTAQRSGTFVEHLTG-ITESEEGISEA 149

Query: 440  NGF-----ASADLKHLGTPAL----EVKELDELPEQWRRSKLAWLCKELPAQKPGTLIRL 499
            NGF     A  D++++ T  +    EV+EL+ELPE+WRRSKLAWLCKE+P  K  TL+RL
Sbjct: 150  NGFGDVESARNDIRNVATRRIETEFEVRELEELPEEWRRSKLAWLCKEVPTHKAVTLVRL 209

Query: 500  LNAQKKWLGQDDATYLTVHCLRIRENETAFRVYKWMLQQRWYRFDYALATKLADYMGKER 559
            LNAQKKW+ Q+DATY++VHC+RIRENET FRVY+WM QQ WYRFD+ L TKLA+Y+GKER
Sbjct: 210  LNAQKKWVRQEDATYISVHCMRIRENETGFRVYRWMTQQNWYRFDFGLTTKLAEYLGKER 269

Query: 560  KFSKCREVFDDIINQGCVPSESTFHILIVAYLSA-PVQGCIEEASTIYNRMIQLGGYQPR 619
            KF+KCREVFDD++NQG VPSESTFHIL+VAYLS+  V+GC+EEA ++YNRMIQLGGY+PR
Sbjct: 270  KFTKCREVFDDVLNQGRVPSESTFHILVVAYLSSLSVEGCLEEACSVYNRMIQLGGYKPR 329

Query: 620  LSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNLVTSGLELHKDIYGGLIWLHSYQDTIDK 679
            LSLHNSLFRAL+SK G +    LKQAEFI+HN+VT+GLE+ KDIY GLIWLHS QD +D 
Sbjct: 330  LSLHNSLFRALVSKQGGILNDQLKQAEFIFHNVVTTGLEVQKDIYSGLIWLHSCQDEVDI 389

Query: 680  ERIVFLRKEMQQAGIKEEREVLLSILRASSKMGDVVEAERSWQKLTYFDGSMPSQAFVYK 739
             RI  LR+EM++AG +E +EV++S+LRA +K G V E ER+W +L   D  +PSQAFVYK
Sbjct: 390  GRINSLREEMKKAGFQESKEVVVSLLRAYAKEGGVEEVERTWLELLDLDCGIPSQAFVYK 449

Query: 740  MEVYSKMGRPMKALEIFREMEQ-LNSTSAAAYQTVIGILCKFQEIELAESIMSGFIKSNL 799
            +E YSK+G   KA+EIFREME+ +   + + Y  +I +LCK Q++EL E++M  F +S  
Sbjct: 450  IEAYSKVGDFAKAMEIFREMEKHIGGATMSGYHKIIEVLCKVQQVELVETLMKEFEESGK 509

Query: 800  KPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPNRTIYSIYLDSLVKVGNIYKAEEI 859
            KPL+P+++++  M+F+L LH+KLE+ F QCLEKC+P++ IY+IYLDSL K+GN+ KA ++
Sbjct: 510  KPLLPSFIEIAKMYFDLGLHEKLEMAFVQCLEKCQPSQPIYNIYLDSLTKIGNLEKAGDV 569

Query: 860  FNQMETNGEIGINARSCNIILSGYLLFGNYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLS 919
            FN+M+ NG I ++ARSCN +L GYL  G  ++AE+IYDLM  KKY+I+PPLMEKLDY+LS
Sbjct: 570  FNEMKNNGTINVSARSCNSLLKGYLDCGKQVQAERIYDLMRMKKYEIEPPLMEKLDYILS 629

Query: 920  LSRKEVKK-PVSLKLSKEQREILIGLLLGGLEIESDEERKNHRIHFEFLKNSNSHSLLRR 979
            L +KEVKK P S+KLSK+QRE+L+GLLLGGL+IESD+E+K+H I FEF +NS +H +L++
Sbjct: 630  LKKKEVKKRPFSMKLSKDQREVLVGLLLGGLQIESDKEKKSHMIKFEFRENSQAHLVLKQ 689

Query: 980  HIYEQYHEWLHPASKLSDGDIDIPYKFCTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSP 1039
            +I++Q+ EWLHP S   + DI IP++F +V HSYFGFYA+ +WP+G P IP LIHRWLSP
Sbjct: 690  NIHDQFREWLHPLSNFQE-DI-IPFEFYSVPHSYFGFYAEHYWPKGQPEIPKLIHRWLSP 749

Query: 1040 RVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVKSLREKSMHCKVKRKGNMYWIGLLGS 1099
              LAYWYMY G +TSSGDI+L+LKGS EGVEK+VK+L+ KSM C+VK+KG ++WIGL G+
Sbjct: 750  HSLAYWYMYSGVKTSSGDIILRLKGSLEGVEKVVKALQAKSMECRVKKKGKVFWIGLQGT 809

Query: 1100 NATWFWKLIEPFILDYLKDSLHADSLNLERVLN-ETENINFDSQSDSVGEASN 1136
            N+  FWKLIEP +L+ LK+ L   S +L+ V   E ++INF S SD   +  N
Sbjct: 810  NSALFWKLIEPHVLENLKEHLKPASESLDNVKEAEEQSINFKSNSDHSDDCVN 843

BLAST of Lsi05G011060 vs. TAIR 10
Match: AT2G35130.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12
Identity = 91/433 (21.02%), Postives = 190/433 (43.88%), Query Frame = 0

Query: 468 LAWLCKELPAQKPGTLIRLL-NAQKKWLGQDDATYLTVHCLRIRENETAFRVYKWMLQQR 527
           L+++ KE    K   ++  L +    W   DD   ++V     ++ ++   V +W+L++ 
Sbjct: 115 LSFIQKETDPDKVADVLGALPSTHASW---DDLINVSVQLRLNKKWDSIILVCEWILRKS 174

Query: 528 WYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPVQGCI 587
            ++ D      L D  G++ ++ +   ++  ++    VP+E T+ +LI AY  A   G I
Sbjct: 175 SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMA---GLI 234

Query: 588 EEASTIYNRMIQLGGYQPR---LSLHNSLFRALMSKPGDLSKHHLKQAEFIYHNLVTSGL 647
           E A  +   M Q     P+   ++++N+    LM + G     + ++A  ++  +     
Sbjct: 235 ERAEVVLVEM-QNHHVSPKTIGVTVYNAYIEGLMKRKG-----NTEEAIDVFQRMKRDRC 294

Query: 648 ELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRASSKMGDVVEA 707
           +   + Y   + ++ Y           L  EM+    K       +++ A ++ G   +A
Sbjct: 295 KPTTETYN--LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 354

Query: 708 ERSWQKLTYFDGSMPSQAFVYK--MEVYSKMGRPMKALEIFREMEQLN-STSAAAYQTVI 767
           E  +++L   DG  P   +VY   ME YS+ G P  A EIF  M+ +      A+Y  ++
Sbjct: 355 EEIFEQLQE-DGLEP-DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 414

Query: 768 GILCKFQEIELAESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEK-CK 827
               +      AE++     +  + P M +++ L++ +       K E    +  E   +
Sbjct: 415 DAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVE 474

Query: 828 PNRTIYSIYLDSLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAEK 887
           P+  + +  L+   ++G   K E+I  +ME NG    +  + NI+++ Y   G   + E+
Sbjct: 475 PDTFVLNSMLNLYGRLGQFTKMEKILAEME-NGPCTADISTYNILINIYGKAGFLERIEE 530

Query: 888 IYDLMCQKKYDID 893
           ++  + +K +  D
Sbjct: 535 LFVELKEKNFRPD 530

BLAST of Lsi05G011060 vs. TAIR 10
Match: AT3G18110.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-11
Identity = 68/309 (22.01%), Postives = 135/309 (43.69%), Query Frame = 0

Query: 547 KFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPVQGCIEEASTIYNRMIQLGGYQPRL 606
           KFSK +E+ D +  +GCVP   +F+ LI A L +   G     +     M++  G +P  
Sbjct: 240 KFSKAQELVDAMRQRGCVPDLISFNTLINARLKS--GGLTPNLAVELLDMVRNSGLRPDA 299

Query: 607 SLHNSLFRALMSKPGDLSKHHLKQAEFIYHNLVTSGLELHKDIYGGLIWLHSYQDTIDKE 666
             +N+L  A           +L  A  ++ ++     +     Y  +I ++       + 
Sbjct: 300 ITYNTLLSACS------RDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 359

Query: 667 RIVFLRKEMQQAGIKEEREVLLSILRASSKMGDVVEAERSWQKLTYFDGSMPSQAFVYKM 726
             +F+  E++  G   +     S+L A ++  +  + +  +Q++           +   +
Sbjct: 360 ERLFM--ELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 419

Query: 727 EVYSKMGRPMKALEIFREMEQLN--STSAAAYQTVIGILCKFQEIELAESIMSGFIKSNL 786
            +Y K G+   AL+++++M+ L+  +  A  Y  +I  L K      A ++MS  +   +
Sbjct: 420 HMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGI 479

Query: 787 KPLMPAYVDLMNMFFNLSLHDKLELTFSQCLEK-CKPNRTIYSIYLDSLVKVGNIYKAEE 846
           KP +  Y  L+  +      ++ E TFS  L    KP+   YS+ LD L++     KA  
Sbjct: 480 KPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWG 538

Query: 847 IFNQMETNG 853
           ++  M ++G
Sbjct: 540 LYRDMISDG 538

BLAST of Lsi05G011060 vs. TAIR 10
Match: AT5G08310.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 3.8e-11
Identity = 63/274 (22.99%), Postives = 120/274 (43.80%), Query Frame = 0

Query: 515 AFRVYKWMLQQRWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILI 574
           A+  + W  +Q  YR D      +A  + + R+ +  + +  D++N  C  S   F   I
Sbjct: 89  AYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFI 148

Query: 575 VAYLSAPVQGCIEEASTIYNRMIQLGGYQPRLSLHNSLFRALMSKPGDLSKHHLKQAEFI 634
               +A   G ++EAS++++R+ ++G   P    +N L  A       +SK +    E +
Sbjct: 149 RCLGNA---GLVDEASSVFDRVREMGLCVPNAYTYNCLLEA-------ISKSNSSSVELV 208

Query: 635 YHNL-VTSGLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVLLSILRA 694
              L        H D +     L  Y +T   ER + +  E+   G  +E  +   ++ +
Sbjct: 209 EARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDE-HISTILVVS 268

Query: 695 SSKMGDVVEAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQLN-STS 754
             K G V +A    + L   D  +  + +   +  + K  R  KA ++F +M ++  +  
Sbjct: 269 FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNAD 328

Query: 755 AAAYQTVIGILCKFQEIELAESIMSGFIKSNLKP 787
            A Y  +IG LCK +++E+A S+     +S + P
Sbjct: 329 IALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351

BLAST of Lsi05G011060 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 68.2 bits (165), Expect = 5.0e-11
Identity = 102/497 (20.52%), Postives = 195/497 (39.24%), Query Frame = 0

Query: 481 GTLIRLLNAQKKWLGQDDATYLTVHCLRIRENETAFRVYKWMLQQRWYRFDYALATKLAD 540
           G++ R L+  K  L  +D   +        + + + R++K+M +Q W + +  + T +  
Sbjct: 90  GSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIS 149

Query: 541 YMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAY------------LSAPVQGCIEE 600
            +G+E    KC EVFD++ +QG   S  ++  LI AY            L       I  
Sbjct: 150 LLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISP 209

Query: 601 ASTIYNRMIQ------------LG--------GYQPRLSLHNSLFRALMSKP-GDLSKHH 660
           +   YN +I             LG        G QP +  +N+L  A   +  GD     
Sbjct: 210 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGD----- 269

Query: 661 LKQAEFIYHNLVTSGLELHKDIYGGLIWLHSYQDTIDKERIVFLRKEMQQAGIKEEREVL 720
             +AE ++  +   G+      Y  L+   ++      E++  L  EM   G   +    
Sbjct: 270 --EAEMVFRTMNDGGIVPDLTTYSHLV--ETFGKLRRLEKVCDLLGEMASGGSLPDITSY 329

Query: 721 LSILRASSKMGDVVEAERSWQKLTYFDGSMPSQAFVYKMEVYSKMGRPMKALEIFREMEQ 780
             +L A +K G + EA   + ++     +  +  +   + ++ + GR     ++F EM+ 
Sbjct: 330 NVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 389

Query: 781 LNS-TSAAAYQTVIGILCK---FQEI--------------------------------EL 840
            N+   AA Y  +I +  +   F+E+                                E 
Sbjct: 390 SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHED 449

Query: 841 AESIMSGFIKSNLKPLMPAYVDLMNMFFNLSLHDKLELTFSQCLE-KCKPNRTIYSIYLD 900
           A  I+     +++ P   AY  ++  F   +L+++  + F+   E    P+   +   L 
Sbjct: 450 ARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLY 509

Query: 901 SLVKVGNIYKAEEIFNQMETNGEIGINARSCNIILSGYLLFGNYLKAEKIYDLMCQKKYD 908
           S  + G + ++E I +++  +G I  N  + N  +  Y   G + +A K Y  M + + D
Sbjct: 510 SFARGGLVKESEAILSRLVDSG-IPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCD 569

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9XIL55.9e-25954.98Pentatricopeptide repeat-containing protein At2g15820, chloroplastic OS=Arabidop... [more]
Q6ZHJ51.2e-23253.72Pentatricopeptide repeat-containing protein OTP51, chloroplastic OS=Oryza sativa... [more]
Q76C993.7e-1123.75Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... [more]
Q5G1S81.8e-1022.01Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidop... [more]
P0C8Q65.3e-1022.99Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial OS... [more]
Match NameE-valueIdentityDescription
A0A1S3CPK00.0e+0090.59pentatricopeptide repeat-containing protein At2g15820, chloroplastic OS=Cucumis ... [more]
A0A0A0LBL00.0e+0088.83LAGLIDADG_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G625100... [more]
A0A6J1KB640.0e+0086.78pentatricopeptide repeat-containing protein At2g15820, chloroplastic OS=Cucurbit... [more]
A0A6J1GB980.0e+0086.65pentatricopeptide repeat-containing protein At2g15820, chloroplastic OS=Cucurbit... [more]
D7TPM60.0e+0068.66LAGLIDADG_2 domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_03s0063g... [more]
Match NameE-valueIdentityDescription
XP_038887990.10.0e+0091.18pentatricopeptide repeat-containing protein At2g15820, chloroplastic [Benincasa ... [more]
XP_008465080.10.0e+0090.59PREDICTED: pentatricopeptide repeat-containing protein At2g15820, chloroplastic ... [more]
XP_004152074.20.0e+0088.83pentatricopeptide repeat-containing protein At2g15820, chloroplastic [Cucumis sa... [more]
XP_022998786.10.0e+0086.78pentatricopeptide repeat-containing protein At2g15820, chloroplastic [Cucurbita ... [more]
XP_022949171.10.0e+0086.65pentatricopeptide repeat-containing protein At2g15820, chloroplastic [Cucurbita ... [more]
Match NameE-valueIdentityDescription
AT2G15820.14.2e-26054.98endonucleases [more]
AT2G35130.21.5e-1221.02Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G18110.11.3e-1122.01Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G08310.13.8e-1122.99Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G74850.15.0e-1120.52plastid transcriptionally active 2 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027434Homing endonucleaseGENE3D3.10.28.10Homing endonucleasescoord: 1012..1108
e-value: 3.5E-11
score: 45.4
IPR027434Homing endonucleaseGENE3D3.10.28.10Homing endonucleasescoord: 900..1010
e-value: 1.5E-17
score: 65.6
IPR027434Homing endonucleaseSUPERFAMILY55608Homing endonucleasescoord: 914..1100
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 472..625
e-value: 2.1E-16
score: 61.8
coord: 787..899
e-value: 2.7E-13
score: 51.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 860..887
e-value: 0.033
score: 14.4
coord: 727..748
e-value: 0.0069
score: 16.6
coord: 824..852
e-value: 0.0063
score: 16.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 824..852
e-value: 5.3E-4
score: 18.0
coord: 539..567
e-value: 6.8E-4
score: 17.6
coord: 860..891
e-value: 5.1E-4
score: 18.0
IPR004860Homing endonuclease, LAGLIDADGPFAMPF03161LAGLIDADG_2coord: 923..1088
e-value: 1.0E-44
score: 152.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..29
NoneNo IPR availablePANTHERPTHR47539PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN OTP51, CHLOROPLASTICcoord: 352..1130
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 696..890

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G011060.1Lsi05G011060.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0000373 Group II intron splicing
biological_process GO:0045292 mRNA cis splicing, via spliceosome
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0048564 photosystem I assembly
biological_process GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation
cellular_component GO:0009507 chloroplast
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0005515 protein binding