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Lsi05G010800 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTAATTTAAAGTTTACTTTTTTATTTTTTAGTACAACAAATACAATGGATGATGATTCTAACTTTTGGGGTCATGTCAGTTACATGCATCTCTTTAATTTATCGGTTAAAATATCAATAAGTTTCCTTAATTATCGAAAGAAAACCTAAGTTATTAATATTCATCAATAATGGTATGTGTGGTTAGATCTTTCCATATACAAACTTCATATATTAATTGTATATAAATGGTTCATATATATATCTCAAAGATTTGAATGAAACATACACAAAATTCTTAGCCAAATCCAAAAATGAAGGCTTTGAATAGTTTGTTTGTGGTTTTGGTGTTTGTAATTTTTGCATTAATTATTAACATTGACACCTGTTTTGCAGCATCCAAATTCATACATCCACTGACGCCAATGAAAGTGACAATTATGAATCACCAAACAAACGATACTCTCTTGGCTCATTGCAAGTCCAAAAATGATGATTTAGGTCAACAATTTTGCTCATTTCTTTTTTTTTTTCTTTCTAATTTTTAGATAATATTTATAATATTTACAATAACCTTTGTTTGTATTTATTCTTTAAATTACATTTTTTTTATTTAATTAAATCTTATTTTGGTGTATTGAATTTTTTTAGTTTGTTTTGTTTTCATCTCTAAATTTTAAGGCTTCTATTTCATAACCATTTGGTTTTTTTATTTTAGGTTTTGAAAATTAAGTTTATGGATACTACATTTACTTATTGGTTTTTGTGTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTGTTTACAATTGAGGATTGTTTTAAAAATACGAGCCTAATTAATAACATTTAAGTCCCGTTTGGTAACCATTTGTTTTTTTTTTTTGTTTTTAGTTTTTTGAAAATTAAGCTTACAAACACCCTTTCCACCTCTAAATTCCTTGTTTTCTTATCTACTTTGTTACCCATGGTTACTAAGTCAAATTTTGAAAATTTAGAAAAGTAGTTTTTAAAAACTTATATTTGTTTTTTAAATTTGGGCTAAGAATTCAACTCTCTTACTCAAGAAAGATGCAAACCATTGTAAGAAAATGTAAAGAATTAAGCTTAATTTTAAAAAACCGAAAACCAAAAACTAGAAACAAAATGGTTACCAAACGGGATCTTAGTTTTTTGTTTTTGGTTTTTAAAAATTGTGCTTGTTTTCCAACAATTTCTCTATCTTGGTTTCGTCTTGCTAAGGTAAGCATTAGAATTTTATGCCAAATTCTAAAAACAAAAATATCCTTTATAAAAACTAGGTTTTTTTTTCACAAAGATGAGCCCAATAGATAGAAGTAGTGTTTGTTGGCTTAATTTTTCCAAAAAAAATTAATTTTTTATCAAACGGATATTTTAATGGGAAATTTTTAAAAATAGAAAAATAAAGAAAACTATTTACACAAAATAGCAAAATTTTAGATAGTTGTGATAGATGCTAATATAAATCTATCAGGGTCTATTTGTAACAACCCAAAATTTTAAGTAATTTTAATTTAATTATCTTAAATTATTTGGGTATTATTTTGAATTTTTAAGTCTTAATTGAATTATTTTAGAAGAAATAATTCAATTTAAATTAAATAGGATAAAAGATTTGAATTTAAATTCCATCGGTGAAAATTGAATTTTAATTTGGGAGATTTAATTTATTTAGTTGAATTGGTGGAGGGAAAAGTAATTTAATATGTATATACCTAATTTATTAAGGAATTAGGGTTTGGGATCGTATATATATATTATTAAGTGACTAGAGAGGGAGAAAAATACACCGAAAAATGGAGAATGGGAAAAACGGCAGTGCAGTTCGGTTTTTCTGCGACAGCTCCTAGAAAATTTTCGTTTTTTGGAGTTTCAACCGTCGGATTGTATTCAAATTTTATCAGCATATTCGGGACATATAGAGCCTCATTCTGAACGGTTGGATAGTTGTTTTAAGCTCTCATGTGTCCGTAATCATTGCCGAACAGAACCTGTAAAACTGGGTAAGTTTTGGGATTTTGGTCTCCATTGGTTATTTGATTTACTATCAAAAAATTTGGTTAATCTCTAATGTTGATCTTGTGTTAGGTTTGAGGTTTCTAAAGTTTTGGTTACGCTTAACAAGCCTTGGCGTCAACGTATTATTATTTTTTTTTTTTGTGGATTTTAGGCAACAACCGTTGTGGGTCATAACGGTGGTGTGGATTGTAATTGGTACACAGGGAATTTCTGAGCGCGATTGTTACACTTATTTCAAGGTAAGTGATTCTACTGCTGGCAGGTCTTGACCATTGGCATATAAATCATTCAGAGTATTATTTGGCTATTGGCTGGCTATTGGCATGTTTGCATGTATGATTTGTCTGGCTAATGCTTCTCTGGCTACTTTATGATTTATCTACTGTTGAGAATTTATCAGTTGAGAATTTACCTATGCTATGTATGATTGAATCCGATGCCAACGCCCGTTGTCCCATGCTATATTATTACTTGAATCATTAAGTTCACCTCAAAACAGTTTTGACGGTGTGCCATCAGGCCACTAGACCTGTGTGGACCGACGGGTTCTCATCAGGTTCACCTCCAGTTTCGACGGTGTGCCATCAGGCCACTAGACATGTGTGGACCGACGGGTTCACCTCCATGTTCACTGGTGTGGATCATCAGGCTTACACCACAGCATTGACAGCGTGCCCTCAAGCCGTTAAGCATGGTGACAGGGCAGTTGGCCTACAGATCTAGAAATCCCGGCAGTGGGATTACTTACTAAGTTTTATACTCATTCGGTTACAATTTTATAGATTTCAGGTAAAGACAAGGACAGACAGACGAATGACAGGAAGAATCCGTGACCGTGCCATTGGGACCAGTCAATGCTTCCGCTCATATTTTTATGTTTTCATGTTGTTAAATCCAAATTTGAATGTTTAAATTAGAAATTTTAGTTTTGCATTCTTAGAGGTTTTATGCAAAACTCACAGTTCTGGTTTTATAATTTTTTTTAGGGGTACCCCGATCTAATATTTTTAATTATTTAAATTTAATGAAGTTATTTATTTGATAAATTTCTTTTATTTTAGTCAAATATACGAAATGTGTCGTTTTGAAATGTATGCATGCATGAAGTAACGACTTCTAGAAAGTCAGGTCGTTACACTATTAGTGATAGAAATTATAGAAGTCTATCACTGATAGATGTTGATAGAAGTCTATCAATATCTATCAATATTTTTTTGCTATTTTCTGTAAATAGTTTGATATTTTTTTCTGTGTAAAAATTTCCCTATTTTAATATTGCCCTATTTAGTGCTCATAATGGCTTGAAATTTTACTCATATATTAATGTGCTCGTTCACATACTCAAATGAGCTTGGTCATTCATTTGTTAAAATAAAAATAAATGTATGACAACAAAGATTTTTTTTTAAGGATTAGAAAAAATAGACATATTTTAAAACTAACCTTAAACTAAATAATATGTGATTTGAACATTTTCTTAATTGAATTTGAGTACGTGTGTGAAAAAATAATTATGGATCCACCATTGATTTCAGGTGAGCAAGTCATCAACATTGGAAAGGTATACGAGTGGAAATTCAGGGTGAATTTTTTTGGAACGACGTTGTTTTGGTGCAACTTTCGCAATGAACAAAAACATGCAACATTTGAAGTTTTTTGGCCAGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATATGGGTAGCTAAAAATGAGGGCTTTTACTTGTTTAATGGCTCTCAAAAGAAATTCGAGTTCGTTCATGCATGGGAATCTGGTACTTCTTAG ATGGATACAACAAATACAATGGATGATGATTCTAACTTTTGGGGTGAGCAAGTCATCAACATTGGAAAGGTATACGAGTGGAAATTCAGGGTGAATTTTTTTGGAACGACGTTGTTTTGGTGCAACTTTCGCAATGAACAAAAACATGCAACATTTGAAGTTTTTTGGCCAGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATATGGGTAGCTAAAAATGAGGGCTTTTACTTGTTTAATGGCTCTCAAAAGAAATTCGAGTTCGTTCATGCATGGGAATCTGGTACTTCTTAG ATGGATACAACAAATACAATGGATGATGATTCTAACTTTTGGGGTGAGCAAGTCATCAACATTGGAAAGGTATACGAGTGGAAATTCAGGGTGAATTTTTTTGGAACGACGTTGTTTTGGTGCAACTTTCGCAATGAACAAAAACATGCAACATTTGAAGTTTTTTGGCCAGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATATGGGTAGCTAAAAATGAGGGCTTTTACTTGTTTAATGGCTCTCAAAAGAAATTCGAGTTCGTTCATGCATGGGAATCTGGTACTTCTTAG MDTTNTMDDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESGTS Homology
BLAST of Lsi05G010800 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.0e-09 Identity = 27/76 (35.53%), Postives = 38/76 (50.00%), Query Frame = 0
BLAST of Lsi05G010800 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 7.7e-09 Identity = 28/86 (32.56%), Postives = 37/86 (43.02%), Query Frame = 0
BLAST of Lsi05G010800 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 55.8 bits (133), Expect = 3.2e-07 Identity = 31/91 (34.07%), Postives = 44/91 (48.35%), Query Frame = 0
BLAST of Lsi05G010800 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.1e-06 Identity = 23/90 (25.56%), Postives = 44/90 (48.89%), Query Frame = 0
BLAST of Lsi05G010800 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.4e-05 Identity = 27/91 (29.67%), Postives = 47/91 (51.65%), Query Frame = 0
BLAST of Lsi05G010800 vs. ExPASy TrEMBL
Match: A0A1S3C8Z6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103498000 PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 3.1e-21 Identity = 50/91 (54.95%), Postives = 60/91 (65.93%), Query Frame = 0
BLAST of Lsi05G010800 vs. ExPASy TrEMBL
Match: A0A6J1ESA0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437334 PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.4e-18 Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Lsi05G010800 vs. ExPASy TrEMBL
Match: A0A6P4B1H1 (S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426491 PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 4.2e-18 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 0
BLAST of Lsi05G010800 vs. ExPASy TrEMBL
Match: A0A6J1C659 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111008788 PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 4.2e-18 Identity = 47/92 (51.09%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Lsi05G010800 vs. ExPASy TrEMBL
Match: A0A6P4ACY4 (S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426490 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.6e-17 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 0
BLAST of Lsi05G010800 vs. NCBI nr
Match: XP_008458671.1 (PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]) HSP 1 Score: 110.9 bits (276), Expect = 6.4e-21 Identity = 50/91 (54.95%), Postives = 60/91 (65.93%), Query Frame = 0
BLAST of Lsi05G010800 vs. NCBI nr
Match: XP_038907112.1 (S-protein homolog 74-like [Benincasa hispida]) HSP 1 Score: 109.8 bits (273), Expect = 1.4e-20 Identity = 51/91 (56.04%), Postives = 59/91 (64.84%), Query Frame = 0
BLAST of Lsi05G010800 vs. NCBI nr
Match: KAE8652336.1 (hypothetical protein Csa_021865 [Cucumis sativus]) HSP 1 Score: 103.6 bits (257), Expect = 1.0e-18 Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of Lsi05G010800 vs. NCBI nr
Match: XP_022931007.1 (S-protein homolog 1-like [Cucurbita moschata]) HSP 1 Score: 102.1 bits (253), Expect = 3.0e-18 Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Lsi05G010800 vs. NCBI nr
Match: XP_022137291.1 (S-protein homolog 1-like [Momordica charantia]) HSP 1 Score: 100.5 bits (249), Expect = 8.7e-18 Identity = 47/92 (51.09%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Lsi05G010800 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-10 Identity = 27/76 (35.53%), Postives = 38/76 (50.00%), Query Frame = 0
BLAST of Lsi05G010800 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 61.2 bits (147), Expect = 5.5e-10 Identity = 28/86 (32.56%), Postives = 37/86 (43.02%), Query Frame = 0
BLAST of Lsi05G010800 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 53.1 bits (126), Expect = 1.5e-07 Identity = 23/90 (25.56%), Postives = 44/90 (48.89%), Query Frame = 0
BLAST of Lsi05G010800 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 51.6 bits (122), Expect = 4.3e-07 Identity = 26/84 (30.95%), Postives = 41/84 (48.81%), Query Frame = 0
BLAST of Lsi05G010800 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 45.8 bits (107), Expect = 2.4e-05 Identity = 26/91 (28.57%), Postives = 43/91 (47.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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