Lsi05G010680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G010680
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionribokinase isoform X1
Locationchr05: 18184216 .. 18189759 (+)
RNA-Seq ExpressionLsi05G010680
SyntenyLsi05G010680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGGTGTTGGTACTACATCTATTGATTTCTTGGCGACAGTGGCTTCTTATCCAAATCCTGACGACAAAATTCGAACCGCAAGCTTAAAGGTTTGCTTTCTTCTTGTTAGCGATTTGATCGAGACATCATTTTTGTGTGTCGTTTATGATAATGTAGACTTTACTCATGATGAAAGATTCAACATTGACTGAATCGATTTGGATGAGGATTTATTAAAGTTTTCAAAATTGCTAAAAAATTGAAATATTTTCAGTTCAGCTCTTGTTATGTTTTTTCCTGTGAAATTCCTCAAAGTCTTGATTGATTTCAAGTCTCCTTTGCACTTTTAAGATTGTTTTTTGTAAAAATCTCGTTCTGAATTACTCAACATACCGTTGTTAATTCATATACTCCCATGAATGATTCAGTGGGAACATATACATATAATATCTGGACGAACAAAGCCTTAGAAAGTGAATAAATTTGGAGTAAAACTTAGAATATAACAGTTGAGATTTTTCCATCATCTACATGAATGAAATGTGTTCTTACAACAAAAACATTATAGTTTCTATTTCCAAAGGTTGCTCTTTATCCATGGCATATACATATTCATGCATGATAAAATTGTAGGTTGCAGATGATACTCATATATTGAGTTCAACAATATATGAACCAGTCGAGCTATGCTCATCATTAGCTCACGGCTTAAGTATTAATTGTAGGCTGTTGGATGTGTCGTGCTTTGGGTGCTCGAAGCGGTCTTCCATATCGTACGGATCCACGGCTGGCATCTTTCTTACATTAGATCATCATTAACTCAAATGAGAATGTGATAGTTTCGTAGATTTTGTTTTCTCTACAACTTTGTATTGGTGTAAAACTAAACATCCTTGTAAGCATTTTAGTCTTTTTTATTTACTTTCCAACCTGTATTGTTAGAAAGTTTGTGTTGGCAAATATTTAAGAGTAAAGTATGTCTTTTGATTTGTCTATGCATTCAGTTCGTATGTTGAAGCGATGTTTTTTGGAAATGTTGTTTCTGCAAAATACTTTCCTTATTTGAAAAATCTTGTCGGCAACATTTGTGCAGATCTTTTGCTATCATAAAAAAGAAATCGTTGAACAACTAGATTGAACCTAGGAAAAAAAAATGAGTCTGGGTCATCTTTTTTCATTTTTTTTTTGACAAATTTCAACTTTCCTTCAAATGGACCTGTTTGACGAGATTTCCGAAGAAATTTAATTCGTGGAATTTGAACTTTATATTTGTATTAATTTAGTATTTGTGAGTACAATCTCTAGTACATAATCCTTTGATTCTTTCTCTCCAAAAGTAAACTTTGATTCTTGCGCTTGTTGATCTACTTAGATGATCGGCCTATGAGCTTGTTGATCTTCTTAGATGATCGACCTTTGAGATTGTTGATATTCTTGGATGATCGGCCTTTGGGCTTGTTGATCTTCTTGGATGACTGTTTTAGATTAACCTTTGGCTTGTTGATCAGCTTGGATCGACCTCCGACTGACTTGTTCATTAGCTTGGATCAGCCTCTAGCTTGTTGATTAGCTTGGATCGACTTCTGCTTGTTATGACTTTAAGAGTTTTAGAGAGTCTTCTGATCTTCTGGAAGTCCTCTGAGCTTTAGTCTTTAAATCTTCAGGAGAGTAGAAGTTGACTTGGGAGCTTTAAAGCTTCAACATTCAGTTTTTCCCATCTTCAGGAAGTTGTAAACTGCTCCAGGAATTCAATGAAGTTTTAATTTTCCCAATTTTCCCATCTTCAGGAAGTTGTAAACTGCTCCAGGAATTCAATGAAGTTTTAATCTTCCAAGTCTTCAAATCTTCAAAAGGTTGTAATCTTGAGGTCGACCAGAGCTTCAGAGTCTTGAAGTCTTCAGAGCTTCCATGTTTTCAGCCAAATGTTTCCAACCCTTCAAAATAAAGGGGTAGGACCTCTATTTATAGAGTTTCTATGGGCGTTCATGGGCTTGGGTCCAGTTGCTTTTGGGCCAAAAAATTGAGTCTGGGTTTGGGTTTGGGCTTGTGCCTAATATCTTTTCTTTGGCCCAAACTTCCACCATTGGCTTGAATTGTGTTGGATTTTTAGACCTACTCAACTTTAATTACTTGGCCCGATCCACTTTATAATTTCACGATGGACTTCGGCTTTTATTGTGGTGACGTGGCGAAATTTGGCTGGTCGAAAATTTTCCTTGAACAGGACCCATGTACTTATGTACATATTAAAAATGAAGTTTCATAAGTTTTTGACACAGTTCCAATTTTGGTTATTTTTGGCATGTGCTAATAATGACCATTTTTCGTCTGTTTTGGGTGGTGCCTTTGTCCTCCCTAAGGAGCACCCATCACGACTTAAATTTTATGTACGTGTGTTAGAAATTTGTCCAAGGATATGAATTCAAAATTTTGAGCCTAGAATCCCTGAATTAAAAAGGTGTATCACACATAAAAAGATAAAAAAAAAACTGTTGAATGACTAGCTTACACCTAGAAAAAAAACTGAGTCTGGGTCATCGTTTTTCAATTTTTTTTTACAAACTTCAACTTTCCTTCAAATGGACCCATATACTTGTTAGAAATGAAGTTTTATAAGTTTTTGACACAGTTCAAATTTTGGTCATTTTTTGTATGTGCTAATAATGACTATTTTTCGTCTGTTTTGAGTCGTGTAGTCAAATGTTGTATGATTTTAGTCATGTTTTTATCTTCTTGTTACTTTCATTTTACCTATGAAAAAAACAAATTATAAAAAAGGAATAAAAGATTTTAAAAAGAAGATGTTAAAATATATTTTAAAAATCTCTAACCAACTTTCCCTCCATCTTGTTCTTTTCTTCAATACTCATTTCCCCAATTTTCTCACACTTGCTAAAATTCTTCATGTTCTTTTTCTACCCACTTCCCCACTAACCTTAACTTCCTCATTTCCCTCTTCCTTTCATGCATGCATTTTGACCAAGGGAAGAATGCTAGGACATAATGATATGAACCGTCTCAAAATTATTATTTATATTTTATGTAATAATTTCGATCTAATTTTACTATTTTTCAAATTTATCCTTCTTATGACATTTTAAATAGGGTTGTTTTAAACATTTTACTATGAATTATAATGTGTCATTAGAGTTTTTTTTGGAAGGCTATTAAAGTCTTACCTTTAAGTTATTTTAGACATTTTATTACGAATTATTGAAGTGGGGAGCAAAATTGTACATTCATGCTATGGGGTCCTCCACTTTGAGTTGAAAAAAAGTTAAAAAAAAGTAGATTTAAAAAATGAGGTTAGTTTTGTAAAAGAAAAACTTTTTAAGCTAAAAATAGCAATTTACCAATTTTGGTTTAGTCTATTACAAATATAAATATAAAATCATTTGATCTTATTAAATAAAATAATGGTAGATTGTTGGTTGAAAATTGTGATTTTTTAATTTATTTTTGAAAAGTTAATTTTTTTACCATTAAAAAATGGAGAAGTTCTAAAAATAGAAAAATAAGAAAAATTATTTACACAAAATAGCGAAATTTTTAGATAGTTGTGATAGAAACGGATAGACGGTGAAAAATTATTTTTTAAATATAATAAAATGAGCCAAAATATTTATAAAGTATAGTAAAATGTCACATTCTATTTATCAATGTCTACATTTTGCTATATTTATAAATATTTTAAACTTTTAAAATAATTTATCTTTTTATAAATTATTTTAAACATCTTTTTTTTATGAATACTTTAAATACAATTTTCATAAATATCCATATATTTTCTATCACATTTTTGTAAAATTGGGACGTCATCGGAGACGGGTGGCGAATAGGGGAAGGAGTCAGCTCGGCGCCGGTTCTTCTACTCCCATAAACAAGATGATGACGTTGCCGGCTTTCCTTTCAAGCAATACGCTTCTTCATTCTTCTCCAACCTTCCTTCTCTTCTCCAAATCAACCAGGTCTGCTTTCCTTCTCCTGCAATTTCTAACTTCAACTCACATTTTCCCGATCAAATCCAAACTAATTCTTTACAATTTCAGCCATTTCTTTCTGCATATTCTGATTTCAGGCCGAGAATGTCCTCGTCAACCTCCTCCTCGGTTCCGATTTCACTTCCTGAAAATCGTGTGGTTGTGAGTTTCTTTCTCTCTCTCCTTGCAATGCTAGACTGCTTTGGTTCTGTTATTGACATAAACAATTTCATATGTATCCTTTTTAGATCATTGAAAGTGATTGAATGGTTAAGTGTGTTTTTGCAGCTTGGTGTTGGTGCTACTTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCCAATCCTGACGACAAAATTAGAACCACAAGCTTAAAGGTTTGATTTCTTCTTGTTAGCAATACGGTCGAGACATCGGGTTTCTTTGTGGTTGCCTAGCTATATATTAAGCATTTGTTGAACTTGTGTTGTGTATAATATGTAGATTTTGCTCATGCTGAGAGATTCTGCTTTGACTTGAATTGATTTGGATGAGGATTTATTAAAGTTTTCGACATTGCTGAAAATTGGAATATTTTCCGTACAACTATTGTTATTTTTTTTCCTGTGAAATTCCTCAAGTCCTGATATATGTCAAATCTGTTTCGCACTTTTAAGACTGCTTTTTGTAGAATTATTGGTTTGAACTACTCAGCATACCTTTTAACAGAGCCTTAGGAAGTGAATGCGTTTGGAGTAGAACTTAGAATATAACAGTTGAGATTTGTCCATCATTTTTATGGCTTACTTAGAGACTCGCTCATTGATCTGTTCAAAGTCCAGATTAAAGGAAATGGCGATAGGGAGCAAAGGAGCATTACATTGCTGCAGCACAACGTAGAGTCATGTATTTGAGAAGGAAGTGTCATGGTGCTACACTAGAGCGACATGGTGCAAGAGCATGAAAAAATACATTTCCTTCTTTATTTGTAAGGAAAGGGGGTGATGGCTAGGCTTTTGAGAGTGTTTTAGAGTTTAAATTTTAGAGAGAAAAATAGGGAGGAACACTTGTGAGACTGAAACCCCACTTGTAATCTTCATCAATTTTTGTAGAATCTGCAGTTGGAGAAGGCTGAAAATAGCCCAAAGTTTGGAGTGAACCAGTATGAACTCAAGTGTGTTGCTTCTTTATTCCTATCTTGTCTCCTTTAATTTGTTTACTTTATTTGTGTACTGCTTTATTTTATGGAAGGGAAATTTTAAGCAAGATTTAAAAATGCCTCTAAATTCCCTACAATAATATTGTATTGTGAGTTGTCTTGGTTCAAGTTCAATCATCTCCCTCTTGTAATAAGTTTTAAAATATATAAGTTTTAAAATATATGTTTGAATTTTTAAATCCTTGTGTATTATGAATGAAATGTGTTCTCTTCTTACAAAAAAAATATTATAGTTTCTATTTACTATAACCATTAGGAGAACCTGTAGCTGATGATTTCTTGTTAGGTACAAGGTGGAGGAAATGTAGGGAATGCTTTAACTTCTGCAGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCTCTTACCAACTTTTAA

mRNA sequence

TTTGGTGTTGGTACTACATCTATTGATTTCTTGGCGACAGTGGCTTCTTATCCAAATCCTGACGACAAAATTCGAACCGCAAGCTTAAAGGTTGCAGATGATACTCATATATTGAGTTCAACAATATATGAACCAGTCGAGCTATGCTCATCATTAGCTCACGGCTTAAGTATTAATTGTAGGCTGTTGGATGTGTCGTGCTTTGGGTGCTCGAAGCGGTCTTCCATATCACGGGTGGCGAATAGGGGAAGGAGTCAGCTCGGCGCCGGTTCTTCTACTCCCATAAACAAGATGATGACGTTGCCGGCTTTCCTTTCAAGCAATACGCTTCTTCATTCTTCTCCAACCTTCCTTCTCTTCTCCAAATCAACCAGGCCGAGAATGTCCTCGTCAACCTCCTCCTCGGTTCCGATTTCACTTCCTGAAAATCGTGTGGTTCTTGGTGTTGGTGCTACTTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCCAATCCTGACGACAAAATTAGAACCACAAGCTTAAAGGTACAAGGTGGAGGAAATGTAGGGAATGCTTTAACTTCTGCAGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCTCTTACCAACTTTTAA

Coding sequence (CDS)

TTTGGTGTTGGTACTACATCTATTGATTTCTTGGCGACAGTGGCTTCTTATCCAAATCCTGACGACAAAATTCGAACCGCAAGCTTAAAGGTTGCAGATGATACTCATATATTGAGTTCAACAATATATGAACCAGTCGAGCTATGCTCATCATTAGCTCACGGCTTAAGTATTAATTGTAGGCTGTTGGATGTGTCGTGCTTTGGGTGCTCGAAGCGGTCTTCCATATCACGGGTGGCGAATAGGGGAAGGAGTCAGCTCGGCGCCGGTTCTTCTACTCCCATAAACAAGATGATGACGTTGCCGGCTTTCCTTTCAAGCAATACGCTTCTTCATTCTTCTCCAACCTTCCTTCTCTTCTCCAAATCAACCAGGCCGAGAATGTCCTCGTCAACCTCCTCCTCGGTTCCGATTTCACTTCCTGAAAATCGTGTGGTTCTTGGTGTTGGTGCTACTTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCCAATCCTGACGACAAAATTAGAACCACAAGCTTAAAGGTACAAGGTGGAGGAAATGTAGGGAATGCTTTAACTTCTGCAGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCTCTTACCAACTTTTAA

Protein sequence

FGVGTTSIDFLATVASYPNPDDKIRTASLKVADDTHILSSTIYEPVELCSSLAHGLSINCRLLDVSCFGCSKRSSISRVANRGRSQLGAGSSTPINKMMTLPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVALTNF
Homology
[Close]
BLAST of Lsi05G010680 vs. ExPASy TrEMBL
Match: A0A5A7T8H5 (Ribokinase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold154G00070 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 3.5e-35
Identity = 92/108 (85.19%), Postives = 93/108 (86.11%), Query Frame = 0 

Query: 98  MMTLPAFLSSNTLL-HSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDF 157
           M  LP  LSSN LL HSSPT LL SKS RP MSSST+SS  IS PENRVVLGVG  SVDF
Sbjct: 1   MTPLPPLLSSNKLLPHSSPTSLL-SKSIRPTMSSSTTSSFSISFPENRVVLGVGTVSVDF 60

Query: 158 LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
           LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA
Sbjct: 61  LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 107

[Close]
BLAST of Lsi05G010680 vs. ExPASy TrEMBL
Match: A0A1S3BH87 (ribokinase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489824 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 3.5e-35
Identity = 92/108 (85.19%), Postives = 93/108 (86.11%), Query Frame = 0 

Query: 98  MMTLPAFLSSNTLL-HSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDF 157
           M  LP  LSSN LL HSSPT LL SKS RP MSSST+SS  IS PENRVVLGVG  SVDF
Sbjct: 1   MTPLPPLLSSNKLLPHSSPTSLL-SKSIRPTMSSSTTSSFSISFPENRVVLGVGTVSVDF 60

Query: 158 LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
           LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA
Sbjct: 61  LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 107

[Close]
BLAST of Lsi05G010680 vs. ExPASy TrEMBL
Match: A0A6J1HH81 (ribokinase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464044 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.3e-34
Identity = 87/110 (79.09%), Postives = 94/110 (85.45%), Query Frame = 0 

Query: 99  MTLPAFLSSNTLLHS----SPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSV 158
           M LPAF+SS TL+HS    +  FL      RPR+SSSTSSSV ISLP+NRVVLGVG+ +V
Sbjct: 1   MPLPAFISSTTLVHSPLRINQPFLCAYSGFRPRISSSTSSSVSISLPDNRVVLGVGSATV 60

Query: 159 DFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
           DFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA
Sbjct: 61  DFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 110

[Close]
BLAST of Lsi05G010680 vs. ExPASy TrEMBL
Match: A0A6J1HGB8 (ribokinase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464044 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.3e-34
Identity = 87/110 (79.09%), Postives = 94/110 (85.45%), Query Frame = 0 

Query: 99  MTLPAFLSSNTLLHS----SPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSV 158
           M LPAF+SS TL+HS    +  FL      RPR+SSSTSSSV ISLP+NRVVLGVG+ +V
Sbjct: 1   MPLPAFISSTTLVHSPLRINQPFLCAYSGFRPRISSSTSSSVSISLPDNRVVLGVGSATV 60

Query: 159 DFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
           DFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA
Sbjct: 61  DFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 110

[Close]
BLAST of Lsi05G010680 vs. ExPASy TrEMBL
Match: A0A6J1HTZ4 (ribokinase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466847 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.9e-34
Identity = 88/110 (80.00%), Postives = 93/110 (84.55%), Query Frame = 0 

Query: 99  MTLPAFLSSNTLLHS----SPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSV 158
           M LPAF+SS TL+HS    +  FL       PRMSSSTSSSV ISLPENRVVLGVG+ +V
Sbjct: 1   MPLPAFISSTTLVHSPLQINQRFLCAYSGFWPRMSSSTSSSVSISLPENRVVLGVGSATV 60

Query: 159 DFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
           DFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA
Sbjct: 61  DFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 110

[Close]
BLAST of Lsi05G010680 vs. NCBI nr
Match: XP_038888957.1 (ribokinase isoform X1 [Benincasa hispida])

HSP 1 Score: 185.7 bits (470), Expect = 4.2e-43
Identity = 100/107 (93.46%), Postives = 102/107 (95.33%), Query Frame = 0 

Query: 98  MMTLPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFL 157
           M  L AF+SS TLLHSSPTFL FSKSTRP+MSSSTSSSVPISLPENRVVLGVGATSVDFL
Sbjct: 1   MTPLQAFISSKTLLHSSPTFLRFSKSTRPKMSSSTSSSVPISLPENRVVLGVGATSVDFL 60

Query: 158 AAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
           AAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA
Sbjct: 61  AAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 107

[Close]
BLAST of Lsi05G010680 vs. NCBI nr
Match: XP_004152009.1 (ribokinase isoform X1 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 3.4e-37
Identity = 92/108 (85.19%), Postives = 96/108 (88.89%), Query Frame = 0 

Query: 98  MMTLPAFLSSNTL-LHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDF 157
           M  LP  LSSN L LHSSPTF+LFSKS RP MSSST+SS  IS PENRVVLGVG+ +VDF
Sbjct: 1   MTPLPPLLSSNKLPLHSSPTFILFSKSIRPTMSSSTTSSRSISFPENRVVLGVGSVAVDF 60

Query: 158 LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
           LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA
Sbjct: 61  LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 108

[Close]
BLAST of Lsi05G010680 vs. NCBI nr
Match: XP_031738611.1 (ribokinase isoform X2 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 3.4e-37
Identity = 92/108 (85.19%), Postives = 96/108 (88.89%), Query Frame = 0 

Query: 98  MMTLPAFLSSNTL-LHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDF 157
           M  LP  LSSN L LHSSPTF+LFSKS RP MSSST+SS  IS PENRVVLGVG+ +VDF
Sbjct: 1   MTPLPPLLSSNKLPLHSSPTFILFSKSIRPTMSSSTTSSRSISFPENRVVLGVGSVAVDF 60

Query: 158 LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
           LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA
Sbjct: 61  LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 108

[Close]
BLAST of Lsi05G010680 vs. NCBI nr
Match: KAA0037911.1 (ribokinase isoform X1 [Cucumis melo var. makuwa] >TYK18988.1 ribokinase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 7.2e-35
Identity = 92/108 (85.19%), Postives = 93/108 (86.11%), Query Frame = 0 

Query: 98  MMTLPAFLSSNTLL-HSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDF 157
           M  LP  LSSN LL HSSPT LL SKS RP MSSST+SS  IS PENRVVLGVG  SVDF
Sbjct: 1   MTPLPPLLSSNKLLPHSSPTSLL-SKSIRPTMSSSTTSSFSISFPENRVVLGVGTVSVDF 60

Query: 158 LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
           LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA
Sbjct: 61  LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 107

[Close]
BLAST of Lsi05G010680 vs. NCBI nr
Match: XP_008447353.1 (PREDICTED: ribokinase isoform X1 [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 7.2e-35
Identity = 92/108 (85.19%), Postives = 93/108 (86.11%), Query Frame = 0 

Query: 98  MMTLPAFLSSNTLL-HSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDF 157
           M  LP  LSSN LL HSSPT LL SKS RP MSSST+SS  IS PENRVVLGVG  SVDF
Sbjct: 1   MTPLPPLLSSNKLLPHSSPTSLL-SKSIRPTMSSSTTSSFSISFPENRVVLGVGTVSVDF 60

Query: 158 LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
           LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA
Sbjct: 61  LAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 107

[Close]
BLAST of Lsi05G010680 vs. TAIR 10
Match: AT4G28706.1 (pfkB-like carbohydrate kinase family protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-21
Identity = 61/104 (58.65%), Postives = 69/104 (66.35%), Query Frame = 0 

Query: 101 LPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAV 160
           LP F +S   L +S  F      TR RMSSS+S       P+N +VLG G  +VDFLA V
Sbjct: 10  LPLFSTSGIYLPASRRF------TRIRMSSSSSIDSVPPPPDNAIVLGCGGIAVDFLATV 69

Query: 161 ASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
            SYP  DDKIR+TSLKVQGGGN  NALT AARLGL  R+ISKVA
Sbjct: 70  DSYPQADDKIRSTSLKVQGGGNAANALTCAARLGLNSRLISKVA 107

[Close]
BLAST of Lsi05G010680 vs. TAIR 10
Match: AT4G28706.3 (pfkB-like carbohydrate kinase family protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.8e-21
Identity = 61/104 (58.65%), Postives = 69/104 (66.35%), Query Frame = 0 

Query: 101 LPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAV 160
           LP F +S   L +S  F  F    R RMSSS+S       P+N +VLG G  +VDFLA V
Sbjct: 10  LPLFSTSGIYLPASRRFTSF----RIRMSSSSSIDSVPPPPDNAIVLGCGGIAVDFLATV 69

Query: 161 ASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
            SYP  DDKIR+TSLKVQGGGN  NALT AARLGL  R+ISKVA
Sbjct: 70  DSYPQADDKIRSTSLKVQGGGNAANALTCAARLGLNSRLISKVA 109

[Close]
BLAST of Lsi05G010680 vs. TAIR 10
Match: AT4G28706.2 (pfkB-like carbohydrate kinase family protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.8e-21
Identity = 61/104 (58.65%), Postives = 69/104 (66.35%), Query Frame = 0 

Query: 101 LPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAV 160
           LP F +S   L +S  F  F    R RMSSS+S       P+N +VLG G  +VDFLA V
Sbjct: 10  LPLFSTSGIYLPASRRFTSF----RIRMSSSSSIDSVPPPPDNAIVLGCGGIAVDFLATV 69

Query: 161 ASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
            SYP  DDKIR+TSLKVQGGGN  NALT AARLGL  R+ISKVA
Sbjct: 70  DSYPQADDKIRSTSLKVQGGGNAANALTCAARLGLNSRLISKVA 109

[Close]
BLAST of Lsi05G010680 vs. TAIR 10
Match: AT4G28706.4 (pfkB-like carbohydrate kinase family protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.8e-21
Identity = 61/104 (58.65%), Postives = 69/104 (66.35%), Query Frame = 0 

Query: 101 LPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAV 160
           LP F +S   L +S  F  F    R RMSSS+S       P+N +VLG G  +VDFLA V
Sbjct: 10  LPLFSTSGIYLPASRRFTSF----RIRMSSSSSIDSVPPPPDNAIVLGCGGIAVDFLATV 69

Query: 161 ASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA 205
            SYP  DDKIR+TSLKVQGGGN  NALT AARLGL  R+ISKVA
Sbjct: 70  DSYPQADDKIRSTSLKVQGGGNAANALTCAARLGLNSRLISKVA 109

[Close]
BLAST of Lsi05G010680 vs. TAIR 10
Match: AT5G43910.2 (pfkB-like carbohydrate kinase family protein )

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-15
Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 0 

Query: 133 SSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAAR 192
           SS    ++P   +VLG G   +D+L  VAS+P PD KIR TS KVQGGGN GNALT  AR
Sbjct: 2   SSCSDEAIPGQPIVLGCGQLCLDYLVTVASFPIPDQKIRGTSFKVQGGGNTGNALTCVAR 61

Query: 193 LGLTPRIISKVA 205
           LGL  RI++KVA
Sbjct: 62  LGLPCRILAKVA 73

The following BLAST results are available for this feature:
BLAST of Lsi05G010680 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi05G010680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T8H53.5e-3585.19Ribokinase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15... [more]
A0A1S3BH873.5e-3585.19ribokinase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489824 PE=3 SV=1[more]
A0A6J1HH812.3e-3479.09ribokinase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464044 PE=3 SV... [more]
A0A6J1HGB82.3e-3479.09ribokinase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464044 PE=3 SV... [more]
A0A6J1HTZ42.9e-3480.00ribokinase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466847 PE=3 SV=1[more]
BLAST of Lsi05G010680 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038888957.14.2e-4393.46ribokinase isoform X1 [Benincasa hispida][more]
XP_004152009.13.4e-3785.19ribokinase isoform X1 [Cucumis sativus][more]
XP_031738611.13.4e-3785.19ribokinase isoform X2 [Cucumis sativus][more]
KAA0037911.17.2e-3585.19ribokinase isoform X1 [Cucumis melo var. makuwa] >TYK18988.1 ribokinase isoform ... [more]
XP_008447353.17.2e-3585.19PREDICTED: ribokinase isoform X1 [Cucumis melo][more]
BLAST of Lsi05G010680 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G28706.12.2e-2158.65pfkB-like carbohydrate kinase family protein [more]
AT4G28706.32.8e-2158.65pfkB-like carbohydrate kinase family protein [more]
AT4G28706.22.8e-2158.65pfkB-like carbohydrate kinase family protein [more]
AT4G28706.42.8e-2158.65pfkB-like carbohydrate kinase family protein [more]
AT5G43910.23.9e-1558.33pfkB-like carbohydrate kinase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029056Ribokinase-likeGENE3D3.40.1190.20coord: 144..207
e-value: 1.0E-9
score: 40.5
IPR029056Ribokinase-likeSUPERFAMILY53613Ribokinase-likecoord: 145..204
NoneNo IPR availablePANTHERPTHR42774:SF3PFKB-LIKE CARBOHYDRATE KINASE FAMILY PROTEINcoord: 123..204
coord: 1..32
NoneNo IPR availablePANTHERPTHR42774PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEINcoord: 123..204
coord: 1..32

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G010680.1Lsi05G010680.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0044281 small molecule metabolic process
biological_process GO:0019252 starch biosynthetic process
molecular_function GO:0019200 carbohydrate kinase activity
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor