Lsi05G010220 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G010220
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionrho-N domain-containing protein 1, chloroplastic-like
Locationchr05: 17704413 .. 17708147 (+)
RNA-Seq ExpressionLsi05G010220
SyntenyLsi05G010220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTTTGACCTGAGGATCGAACATTTGCATTGATGCCCCTAAACTTCTTGAATTTGAATTTCTATAGTTTTTAGCGCCTCTTTGTTTTGTCTATGTTTTGTTGTTGTTTCCTGTCCTATTTGGTTGAATATGGTTGTGGAGAAATTAAAGCTCTGCATTTATTGGATTTCGTTTGATCTTTTCTGTTGCGCTTTCTGTTCTGTTTCTCTCTGTTTTCCTTTTTCTAAGTTTAAGTTCAGTTTTAGAGTACTTAATACCATATTCTGATTGCTTGAAAATTCTCTACTTAATCGGATTGCGTGACCCGTTGATTTGTTATGCTGCATCATGCTTTCACCTTCTTGAATTGAATTCCTCACTGCGTGCTTGAAGTTGGTATATGCATCATCTCGGAGCACTATGTGTGCTGATATTGAATTTTCCAGTTTTCACATCCAAGGTTTTAACTCTTAGCTTGGAGAGATACGCCTTCTTGGAACAACAAGAGTCTTACGCCTCTCATAGAATTAGCGTGCTTAAAGTCTCTATTAGGGGTGTTCGTGGGTTGGATTGGTCGGGCTAAAGAACTTTTTAGACCTAACTCAATTGTTCGGGTTGTAAGTTTCTTCAATCCAAATAACCCTTATTAAATAATGAACCCAACCCAACTATGAAACATTTGGGTTGGGTTGGTTTTGATTAATTGGGCCATTTATTAAAATTTGTATTCTAAAGATAAGTAAAATGTTAATGTATAAAATTATATTCAATGAAATGTTTCTTATCTAAACCAAATGGGTTAGGTTGGGTTGATCGGGTTTTTGAACACCCCCAGTCTCTATGCCCTATGTAATGATTGGAAGAATAATATTAATTTGCCTCAAAAGTTTGAGTATAACAATACAAAGTATTACTACTTTTCTCTACTATGTATTGAAGAAAAAAATTTATAGTATTAGTCAATCCTATAAATGATAATAGTAGTGAGGTTAAAAGATATCCTTTCTTAGAATTTTTGTTTGAGTGGCAGTTGATAAGGGTGGTTTTTTTATTCTCTTATATGACAATTATGTATAGCAATACCTGATCATACTAACTAGGATTTGTTAAATGTTAGTGGTTAAATTTGAGGCTTACGTCTTGCCTCTTCAAGAGGAAAAATCTCAAGGTCACTTTTTGCCTTTTAAAATATTGTTGACATCCATATTGTTTTCACATATGATGATTGTTTAAACTGTTTTGATTCATGGGCTTTGTTATACCTTCATCTTCAATTATGTTGAAGTGTTGTTTCCATGATTGATGATTCATCGACGTGCCTCCATCTATTAGGGGAAGTGATTGACGAGTGTATTATTGTCACATTCATAGAAAATATATATATTGTTGATCACTGTTGATGCATTATTGATGTTCAATAGTAAGCAGATAACATAGTTTGGAATCGCATGACTTGGTTGTAGAAACATAAGGCTGTTCATATATGCCCAAATCATGAAACTTAAAGCCTATGACCGTTAAGTTGCTTTCTCGACGCCCTTTGCCTGTAGCAACTGGTCCTAATTGTTGCTTCTCCATGTGTTTTTTTCCATTCAACTACGTGCACAGGTTATTGATTGCAGTTATAAATTGGTGGTGCAATGAAGAAAAGAGCAGTCATGGCTGTCACTTTACTGTGGCTGATCTAGTTCTCTATTATTGGTTATTTTGATATTTTTTTCAATGGAAGCTTCTTTGTCATTGCTATATTTCTTCATTTTCTCTTTTGAAGGCAACATCTTTTATTTATTTGAATGCCTGGCTTCAATTGCATAGTTCTAATTGTGTGGTTTTCTTTCAAATGAATAAATAACCACACTTACATTGAGAAAAATGAAAGAATACACGGGTATACAAAAAAAAAAAAGAAAGCCAACAAAATAGAAGAGGCTACCTAAAAGAAAGGCCTCCGGTCGAGTAAAATAAAGCTTAGAGAATAACTAAAAAAAACTTCATAACCACAAGCCCACAAAGAGACATAAAATCTAGCAAGGGACCAAACATTAGAAGGATTAATTGCATAGTTTTAATTTTGTGGTTTGTACTCTATACCATGATGGATGACAACAACTGTTACCCTCTTTATGATTGCTTACTGTTAATGTATGGCAGTATACTTTTGGAATAAAAGATGGAAAATTAGAGGTAGTTGAAGGTAATGCTATTCTTGCTGTAGATGGCTGTTCTAGATTGGTTGGTCATAAAATTTATACCCAAAATCAGATTGAAGATTGAAAAGAAAATGGTTAAAAGAAAGGCTTGGGATTAAATCTGCTCTGTTTCTGCAATGTTCAGGGGATTTCAATATATTTATGAAATCATACTTTTTTGGACTTGGATACTTCTCCCTTATGAATTCTCTTCTAGTTTGTTTATATGGTTTTGGTTACTATTCGTGCTGGAAATCTGATAAGTTTTTATAAACATGGAATCTTGATTTGATATAGGCTTTGGACTGTCAGATAGCAGATGCCTACCATGCTCTGGAGTTTCAGGACGAGCAGCCTCGGTCTCTTCACGCTCTTTATGTGCTGAAAATAGAATCAATGCACCGGTCAAATTCAGACCTCTAAACTGTACTTCAGTGGGAGCATCTTTTACATGCAAAGCCAGCTCAGGAGGTCATAGGAGAAACCCAGATTTTTCAAAGCAAAATAGGCATGGCTTCTCAAGAAGTAGAAATAGGCAAAATGAGGAGAGAGAGAACCTTGAAAATGTTGATGAAACTGATTTATTATCATCTAAGAATGGACCATTACTTTCAATCTCTAGCACCCCAAAATCCCAGGCCACTGCTACCCCAGGCCCAAGGGAGAAGGAAATTGTTGAGCTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAGCGAGCTGCGATGAAAGAAGAGAAGAAAATGGAAGCTCAAGGACAAACTAAAGGGAGTGAGACAGTGGATTCTCTTCTTAAGCTATTGAGAAAGCATTCGGTAGAGCAAGGGAAAAGAAGCAGTGGTGGTGGTAGCGGCAGCAGCAGCAAGGACTTCGGTTTTAACCATGTCAAAGAGAATGGTCCATATGATGAAGGAAAAGGCACAAGCATTTTTGGCCTAAGTGCCAATTTGAGAGAGAAGGCCCAAGAGCCAACAGGTTCTTTCAGTAGACCCGTATCAAATTTTCAACGTAAATCCCCCGTGCCTCGGGTGAAGTACCAACCAATTTACCCTGGGGAAAGTATTGTCGACTCCACTGATGGTGTGAATTCAAAGGGAGTGAAACTTAATGGAACTGAGGCAGGTTCTCATCTGAAGGCAAAGGTATGGACTCGGCAGGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAGGAGAGACAGAGCAGGAGCCAGAGCCAGACCAAGAGTATGAGTTGGAGCCAGAAGCTGAATCATATGAGCTAGACCATGAGCCTGATGAAATGGAGCCTGAACTTGTTAATTTATTAGGCGTGTCATCAGATGTTGACAACACGTTTGAAGATGATGTTAAAGACAATGAGAAATTTGCAAAGCATGATGAACATGAGGATTTGAACTCATTGAAGCTTGCTGAACTGAGGGCGATTGCCAAATCTCGCAGTTTGAAAGGGTTCTCGAAGATGAAGAAGAGCGAGCTCGTGCAGTTGTTAAGCGATGCTCAGGTTTGAGAATGTCATGCTGGACAGGAACCTCTGGGTTTAGGATGTTTTAGGTTTTTTT

mRNA sequence

ATGGGCTTTGGACTGTCAGATAGCAGATGCCTACCATGCTCTGGAGTTTCAGGACGAGCAGCCTCGGTCTCTTCACGCTCTTTATGTGCTGAAAATAGAATCAATGCACCGGTCAAATTCAGACCTCTAAACTGTACTTCAGTGGGAGCATCTTTTACATGCAAAGCCAGCTCAGGAGGTCATAGGAGAAACCCAGATTTTTCAAAGCAAAATAGGCATGGCTTCTCAAGAAGTAGAAATAGGCAAAATGAGGAGAGAGAGAACCTTGAAAATGTTGATGAAACTGATTTATTATCATCTAAGAATGGACCATTACTTTCAATCTCTAGCACCCCAAAATCCCAGGCCACTGCTACCCCAGGCCCAAGGGAGAAGGAAATTGTTGAGCTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAGCGAGCTGCGATGAAAGAAGAGAAGAAAATGGAAGCTCAAGGACAAACTAAAGGGAGTGAGACAGTGGATTCTCTTCTTAAGCTATTGAGAAAGCATTCGGTAGAGCAAGGGAAAAGAAGCAGTGGTGGTGGTAGCGGCAGCAGCAGCAAGGACTTCGGTTTTAACCATGTCAAAGAGAATGGTCCATATGATGAAGGAAAAGGCACAAGCATTTTTGGCCTAAGTGCCAATTTGAGAGAGAAGGCCCAAGAGCCAACAGGTTCTTTCAGTAGACCCGTATCAAATTTTCAACGTAAATCCCCCGTGCCTCGGGTGAAGTACCAACCAATTTACCCTGGGGAAAGTATTGTCGACTCCACTGATGGTGTGAATTCAAAGGGAGTGAAACTTAATGGAACTGAGGCAGGTTCTCATCTGAAGGCAAAGGTATGGACTCGGCAGGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAGGAGAGACAGAGCAGGAGCCAGAGCCAGACCAAGAGTATGAGTTGGAGCCAGAAGCTGAATCATATGAGCTAGACCATGAGCCTGATGAAATGGAGCCTGAACTTGTTAATTTATTAGGCGTGTCATCAGATGTTGACAACACGTTTGAAGATGATGTTAAAGACAATGAGAAATTTGCAAAGCATGATGAACATGAGGATTTGAACTCATTGAAGCTTGCTGAACTGAGGGCGATTGCCAAATCTCGCAGTTTGAAAGGGTTCTCGAAGATGAAGAAGAGCGAGCTCGTGCAGTTGTTAAGCGATGCTCAGGTTTGAGAATGTCATGCTGGACAGGAACCTCTGGGTTTAGGATGTTTTAGGTTTTTTT

Coding sequence (CDS)

ATGGGCTTTGGACTGTCAGATAGCAGATGCCTACCATGCTCTGGAGTTTCAGGACGAGCAGCCTCGGTCTCTTCACGCTCTTTATGTGCTGAAAATAGAATCAATGCACCGGTCAAATTCAGACCTCTAAACTGTACTTCAGTGGGAGCATCTTTTACATGCAAAGCCAGCTCAGGAGGTCATAGGAGAAACCCAGATTTTTCAAAGCAAAATAGGCATGGCTTCTCAAGAAGTAGAAATAGGCAAAATGAGGAGAGAGAGAACCTTGAAAATGTTGATGAAACTGATTTATTATCATCTAAGAATGGACCATTACTTTCAATCTCTAGCACCCCAAAATCCCAGGCCACTGCTACCCCAGGCCCAAGGGAGAAGGAAATTGTTGAGCTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAGCGAGCTGCGATGAAAGAAGAGAAGAAAATGGAAGCTCAAGGACAAACTAAAGGGAGTGAGACAGTGGATTCTCTTCTTAAGCTATTGAGAAAGCATTCGGTAGAGCAAGGGAAAAGAAGCAGTGGTGGTGGTAGCGGCAGCAGCAGCAAGGACTTCGGTTTTAACCATGTCAAAGAGAATGGTCCATATGATGAAGGAAAAGGCACAAGCATTTTTGGCCTAAGTGCCAATTTGAGAGAGAAGGCCCAAGAGCCAACAGGTTCTTTCAGTAGACCCGTATCAAATTTTCAACGTAAATCCCCCGTGCCTCGGGTGAAGTACCAACCAATTTACCCTGGGGAAAGTATTGTCGACTCCACTGATGGTGTGAATTCAAAGGGAGTGAAACTTAATGGAACTGAGGCAGGTTCTCATCTGAAGGCAAAGGTATGGACTCGGCAGGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAGGAGAGACAGAGCAGGAGCCAGAGCCAGACCAAGAGTATGAGTTGGAGCCAGAAGCTGAATCATATGAGCTAGACCATGAGCCTGATGAAATGGAGCCTGAACTTGTTAATTTATTAGGCGTGTCATCAGATGTTGACAACACGTTTGAAGATGATGTTAAAGACAATGAGAAATTTGCAAAGCATGATGAACATGAGGATTTGAACTCATTGAAGCTTGCTGAACTGAGGGCGATTGCCAAATCTCGCAGTTTGAAAGGGTTCTCGAAGATGAAGAAGAGCGAGCTCGTGCAGTTGTTAAGCGATGCTCAGGTTTGA

Protein sequence

MGFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQGETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSDAQV
Homology
BLAST of Lsi05G010220 vs. ExPASy Swiss-Prot
Match: Q94K75 (Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RHON1 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.5e-60
Identity = 183/411 (44.53%), Postives = 248/411 (60.34%), Query Frame = 0

Query: 2   GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGH 61
           G+ LSDSRC   S VS R  ++   S C +++ N  +K  P       +SF C+ASSGG+
Sbjct: 16  GYTLSDSRCFFNSAVSRRTLAILPCSSCLDHK-NGRLKSVPNR-----SSFVCRASSGGY 75

Query: 62  RRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATPG 121
           RRNPDFS+ N+HG+ R  NRQ+  RE+ + ++ +D+LSS+NGPL ++SS+PK QAT++PG
Sbjct: 76  RRNPDFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNLSSSPKFQATSSPG 135

Query: 122 PREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGQTKGSETVDSLLKLLRKHSVEQGK 181
           PREKEIVELFRKVQAQLR R AA KEEKK+E  ++GQ K SETVDSLLKLLRKHS EQ K
Sbjct: 136 PREKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLLRKHSGEQSK 195

Query: 182 RSSGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQR 241
           R            F      +    D+   T     S N    A     SF+RP S+F+R
Sbjct: 196 R--------QVSKFSSQGEVQGDTVDKQDRTGNLVTSGNKDNNA----SSFTRPTSSFRR 255

Query: 242 KSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQ 301
           KSPVPR +  P Y  E+  D      S    +  T+     K  V    E E E   E +
Sbjct: 256 KSPVPRSQSPPAYSSEATFD-----QSSSYSVTWTQK----KDTVELHDEPEHEPAYEHE 315

Query: 302 SQGETEQEPEP-----DQEYELEPEAESYELDHEPDEMEPELVN----LLGVSSDVDNTF 361
            + E E EP P     + + EL+PE+ S+  + E D++  ++++    +L V SD D + 
Sbjct: 316 HEPENESEPGPVTTMLEPDSELKPESSSFYQEEEDDDVTFDVLSQDDGILDVLSDDDESL 375

Query: 362 EDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLL 401
           +D  +D+++ A+ +  +DL+ LKL ELR IAKSR LKG SKMKK+ELV+LL
Sbjct: 376 DDADEDSDE-AEEEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVELL 396

BLAST of Lsi05G010220 vs. ExPASy Swiss-Prot
Match: Q8L4E7 (SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.0e-36
Identity = 131/356 (36.80%), Postives = 204/356 (57.30%), Query Frame = 0

Query: 51  SFTCKASSGGHR-RNPDFSKQNRHGFSRSRNRQNEERENLENVDE--TDLLSSKNGPLLS 110
           S  C A+   HR R+ D ++  + G +R +++  +E+++ EN+DE  TD++SSKNGP +S
Sbjct: 39  SLVCSANPNNHRSRSSDITRHQKGGSARRKSKPYQEKDDSENIDEFDTDIMSSKNGPPIS 98

Query: 111 ISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSE-TVDSLL 170
           ++S  + QAT+ PG REKEIVELF++VQAQLR R   KEEKK E Q + +G   +VDSLL
Sbjct: 99  LTSNSRPQATSVPGEREKEIVELFKRVQAQLRARGKGKEEKKPE-QAKAQGERGSVDSLL 158

Query: 171 KLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPT 230
            LLRKHSV+Q ++S         K+   +  K +      + +SIF  +    E+ +   
Sbjct: 159 NLLRKHSVDQRRKS------GDEKEQSVDQTKRSNESGNKQNSSIFIKNDTQEEQKKPHP 218

Query: 231 GSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTR 290
            +F RP SNF+R+SPVP VK+QP+    + VD+   +N+    +   EA   L+ K  T 
Sbjct: 219 AAFKRPASNFRRRSPVPNVKFQPV----TNVDAERVINNINDAVQ--EAKPTLENKAAT- 278

Query: 291 QESEREHWEELQSQGETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVD 350
            E +     E  S  E E     D ++  + E ++ + D    E +   + +  V   +D
Sbjct: 279 DEPDSVSTFEPNSVIEPENLSLDDLDHISDDEPDASDTDEPSGEYDEPSLQIPSVPI-ID 338

Query: 351 NTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSD 403
            + +  +K +          DL++LK+ ELR +AKSR +KG+SKMKK++LV+LLS+
Sbjct: 339 ESHDTTLKSSL------GGPDLSTLKVTELRELAKSRGIKGYSKMKKNDLVELLSN 373

BLAST of Lsi05G010220 vs. ExPASy TrEMBL
Match: A0A5D3DAG1 (Rho-N domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001440 PE=4 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 7.9e-185
Identity = 349/403 (86.60%), Postives = 380/403 (94.29%), Query Frame = 0

Query: 1   MGFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGG 60
           +GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS G
Sbjct: 7   IGFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFTCKASS-G 66

Query: 61  HRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATP 120
           HRRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+NGPLLSISSTPKSQATATP
Sbjct: 67  HRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPKSQATATP 126

Query: 121 GPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRS 180
           GPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRS
Sbjct: 127 GPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHAVEQGKRS 186

Query: 181 SGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKS 240
           S  G+G S+KD  FNHVKENGPYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+S
Sbjct: 187 S--GAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNFQRRS 246

Query: 241 PVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQ 300
           PVPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ
Sbjct: 247 PVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHWEELQSQ 306

Query: 301 GETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFA 360
            +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+
Sbjct: 307 RDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFS 366

Query: 361 KHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSDA 404
           KH EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS++
Sbjct: 367 KHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNS 406

BLAST of Lsi05G010220 vs. ExPASy TrEMBL
Match: A0A1S4DXI1 (rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 1.0e-184
Identity = 349/402 (86.82%), Postives = 379/402 (94.28%), Query Frame = 0

Query: 2   GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGH 61
           GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GH
Sbjct: 28  GFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFTCKASS-GH 87

Query: 62  RRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATPG 121
           RRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+NGPLLSISSTPKSQATATPG
Sbjct: 88  RRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPKSQATATPG 147

Query: 122 PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSS 181
           PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS
Sbjct: 148 PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHAVEQGKRSS 207

Query: 182 GGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSP 241
             G+G S+KD  FNHVKENGPYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SP
Sbjct: 208 --GAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNFQRRSP 267

Query: 242 VPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG 301
           VPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ 
Sbjct: 268 VPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHWEELQSQR 327

Query: 302 ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAK 361
           +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+K
Sbjct: 328 DTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSK 387

Query: 362 HDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSDA 404
           H EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS++
Sbjct: 388 HGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNS 426

BLAST of Lsi05G010220 vs. ExPASy TrEMBL
Match: A0A1S3BHF2 (rho-N domain-containing protein 1, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 1.0e-184
Identity = 349/402 (86.82%), Postives = 379/402 (94.28%), Query Frame = 0

Query: 2   GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGH 61
           GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GH
Sbjct: 14  GFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFTCKASS-GH 73

Query: 62  RRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATPG 121
           RRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+NGPLLSISSTPKSQATATPG
Sbjct: 74  RRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPKSQATATPG 133

Query: 122 PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSS 181
           PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS
Sbjct: 134 PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHAVEQGKRSS 193

Query: 182 GGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSP 241
             G+G S+KD  FNHVKENGPYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SP
Sbjct: 194 --GAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNFQRRSP 253

Query: 242 VPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG 301
           VPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ 
Sbjct: 254 VPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHWEELQSQR 313

Query: 302 ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAK 361
           +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+K
Sbjct: 314 DTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSK 373

Query: 362 HDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSDA 404
           H EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS++
Sbjct: 374 HGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNS 412

BLAST of Lsi05G010220 vs. ExPASy TrEMBL
Match: A0A1S4DWS1 (rho-N domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 1.0e-184
Identity = 349/402 (86.82%), Postives = 379/402 (94.28%), Query Frame = 0

Query: 2   GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGH 61
           GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GH
Sbjct: 34  GFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFTCKASS-GH 93

Query: 62  RRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATPG 121
           RRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+NGPLLSISSTPKSQATATPG
Sbjct: 94  RRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPKSQATATPG 153

Query: 122 PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSS 181
           PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS
Sbjct: 154 PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHAVEQGKRSS 213

Query: 182 GGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSP 241
             G+G S+KD  FNHVKENGPYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SP
Sbjct: 214 --GAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNFQRRSP 273

Query: 242 VPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG 301
           VPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ 
Sbjct: 274 VPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHWEELQSQR 333

Query: 302 ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAK 361
           +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+K
Sbjct: 334 DTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSK 393

Query: 362 HDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSDA 404
           H EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS++
Sbjct: 394 HGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNS 432

BLAST of Lsi05G010220 vs. ExPASy TrEMBL
Match: A0A1S4DWR7 (rho-N domain-containing protein 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 1.0e-184
Identity = 349/402 (86.82%), Postives = 379/402 (94.28%), Query Frame = 0

Query: 2   GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGH 61
           GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GH
Sbjct: 30  GFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFTCKASS-GH 89

Query: 62  RRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATPG 121
           RRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+NGPLLSISSTPKSQATATPG
Sbjct: 90  RRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPKSQATATPG 149

Query: 122 PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSS 181
           PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS
Sbjct: 150 PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHAVEQGKRSS 209

Query: 182 GGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSP 241
             G+G S+KD  FNHVKENGPYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SP
Sbjct: 210 --GAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNFQRRSP 269

Query: 242 VPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG 301
           VPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ 
Sbjct: 270 VPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHWEELQSQR 329

Query: 302 ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAK 361
           +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+K
Sbjct: 330 DTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSK 389

Query: 362 HDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSDA 404
           H EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS++
Sbjct: 390 HGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNS 428

BLAST of Lsi05G010220 vs. NCBI nr
Match: XP_038887988.1 (rho-N domain-containing protein 1, chloroplastic-like isoform X1 [Benincasa hispida])

HSP 1 Score: 693.3 bits (1788), Expect = 1.2e-195
Identity = 376/406 (92.61%), Postives = 391/406 (96.31%), Query Frame = 0

Query: 3   FGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHR 62
           FGLSDSRCLPCSGVSGRAASVSSRSLCAE+RI+A VKFRPLNCTS+GASFTCKASSGGHR
Sbjct: 15  FGLSDSRCLPCSGVSGRAASVSSRSLCAEHRIDARVKFRPLNCTSLGASFTCKASSGGHR 74

Query: 63  RNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATPGP 122
           RNPDFSKQNRHGFSRSRNRQNEERE+L+NVDE+DLLSSKNGPLLSISSTPKSQATATPGP
Sbjct: 75  RNPDFSKQNRHGFSRSRNRQNEERESLDNVDESDLLSSKNGPLLSISSTPKSQATATPGP 134

Query: 123 REKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSG 182
           REKEIVELFRKVQAQLRERAAMKEEKK+EAQGQTKGSETVDSLLKLLRKHSVEQGKRSSG
Sbjct: 135 REKEIVELFRKVQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSG 194

Query: 183 GGS--GSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKS 242
           GGS  GSSSKDF FNHVKENG YDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKS
Sbjct: 195 GGSGGGSSSKDFNFNHVKENGHYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKS 254

Query: 243 PVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQES-EREHWEELQS 302
           PVPRVKYQPI+PGESIVDSTDGVNSKGVKLNGTE  S LKAKVWTRQES ER HWEELQS
Sbjct: 255 PVPRVKYQPIFPGESIVDSTDGVNSKGVKLNGTETRSQLKAKVWTRQESTERGHWEELQS 314

Query: 303 QGETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKF 362
           QGET+QEPE DQEYELEPEAESYEL+H+PDE E ELVNLLGVSSD+D+TF+DDVKDNEKF
Sbjct: 315 QGETKQEPELDQEYELEPEAESYELEHDPDETESELVNLLGVSSDLDDTFDDDVKDNEKF 374

Query: 363 AKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSDAQV 406
           AKHDEHEDLNSLK+AELRAIAKSRSLKGFSKMKKSELVQLLSD  V
Sbjct: 375 AKHDEHEDLNSLKVAELRAIAKSRSLKGFSKMKKSELVQLLSDVHV 420

BLAST of Lsi05G010220 vs. NCBI nr
Match: XP_038887989.1 (rho-N domain-containing protein 1, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 687.6 bits (1773), Expect = 6.6e-194
Identity = 373/404 (92.33%), Postives = 389/404 (96.29%), Query Frame = 0

Query: 5   LSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRN 64
           L+DSRCLPCSGVSGRAASVSSRSLCAE+RI+A VKFRPLNCTS+GASFTCKASSGGHRRN
Sbjct: 12  LTDSRCLPCSGVSGRAASVSSRSLCAEHRIDARVKFRPLNCTSLGASFTCKASSGGHRRN 71

Query: 65  PDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATPGPRE 124
           PDFSKQNRHGFSRSRNRQNEERE+L+NVDE+DLLSSKNGPLLSISSTPKSQATATPGPRE
Sbjct: 72  PDFSKQNRHGFSRSRNRQNEERESLDNVDESDLLSSKNGPLLSISSTPKSQATATPGPRE 131

Query: 125 KEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGG 184
           KEIVELFRKVQAQLRERAAMKEEKK+EAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGG
Sbjct: 132 KEIVELFRKVQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGG 191

Query: 185 S--GSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPV 244
           S  GSSSKDF FNHVKENG YDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPV
Sbjct: 192 SGGGSSSKDFNFNHVKENGHYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPV 251

Query: 245 PRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQES-EREHWEELQSQG 304
           PRVKYQPI+PGESIVDSTDGVNSKGVKLNGTE  S LKAKVWTRQES ER HWEELQSQG
Sbjct: 252 PRVKYQPIFPGESIVDSTDGVNSKGVKLNGTETRSQLKAKVWTRQESTERGHWEELQSQG 311

Query: 305 ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAK 364
           ET+QEPE DQEYELEPEAESYEL+H+PDE E ELVNLLGVSSD+D+TF+DDVKDNEKFAK
Sbjct: 312 ETKQEPELDQEYELEPEAESYELEHDPDETESELVNLLGVSSDLDDTFDDDVKDNEKFAK 371

Query: 365 HDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSDAQV 406
           HDEHEDLNSLK+AELRAIAKSRSLKGFSKMKKSELVQLLSD  V
Sbjct: 372 HDEHEDLNSLKVAELRAIAKSRSLKGFSKMKKSELVQLLSDVHV 415

BLAST of Lsi05G010220 vs. NCBI nr
Match: KAA0038048.1 (rho-N domain-containing protein 1 [Cucumis melo var. makuwa] >TYK20556.1 rho-N domain-containing protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 656.4 bits (1692), Expect = 1.6e-184
Identity = 349/403 (86.60%), Postives = 380/403 (94.29%), Query Frame = 0

Query: 1   MGFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGG 60
           +GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS G
Sbjct: 7   IGFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFTCKASS-G 66

Query: 61  HRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATP 120
           HRRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+NGPLLSISSTPKSQATATP
Sbjct: 67  HRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPKSQATATP 126

Query: 121 GPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRS 180
           GPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRS
Sbjct: 127 GPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHAVEQGKRS 186

Query: 181 SGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKS 240
           S  G+G S+KD  FNHVKENGPYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+S
Sbjct: 187 S--GAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNFQRRS 246

Query: 241 PVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQ 300
           PVPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ
Sbjct: 247 PVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHWEELQSQ 306

Query: 301 GETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFA 360
            +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+
Sbjct: 307 RDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFS 366

Query: 361 KHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSDA 404
           KH EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS++
Sbjct: 367 KHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNS 406

BLAST of Lsi05G010220 vs. NCBI nr
Match: XP_016900423.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 656.0 bits (1691), Expect = 2.1e-184
Identity = 349/402 (86.82%), Postives = 379/402 (94.28%), Query Frame = 0

Query: 2   GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGH 61
           GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GH
Sbjct: 34  GFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFTCKASS-GH 93

Query: 62  RRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATPG 121
           RRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+NGPLLSISSTPKSQATATPG
Sbjct: 94  RRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPKSQATATPG 153

Query: 122 PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSS 181
           PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS
Sbjct: 154 PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHAVEQGKRSS 213

Query: 182 GGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSP 241
             G+G S+KD  FNHVKENGPYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SP
Sbjct: 214 --GAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNFQRRSP 273

Query: 242 VPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG 301
           VPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ 
Sbjct: 274 VPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHWEELQSQR 333

Query: 302 ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAK 361
           +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+K
Sbjct: 334 DTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSK 393

Query: 362 HDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSDA 404
           H EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS++
Sbjct: 394 HGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNS 432

BLAST of Lsi05G010220 vs. NCBI nr
Match: XP_008447421.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X7 [Cucumis melo])

HSP 1 Score: 656.0 bits (1691), Expect = 2.1e-184
Identity = 349/402 (86.82%), Postives = 379/402 (94.28%), Query Frame = 0

Query: 2   GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGH 61
           GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GH
Sbjct: 14  GFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFTCKASS-GH 73

Query: 62  RRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATPG 121
           RRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+NGPLLSISSTPKSQATATPG
Sbjct: 74  RRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPKSQATATPG 133

Query: 122 PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSS 181
           PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS
Sbjct: 134 PREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHAVEQGKRSS 193

Query: 182 GGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSP 241
             G+G S+KD  FNHVKENGPYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SP
Sbjct: 194 --GAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPASNFQRRSP 253

Query: 242 VPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG 301
           VPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ 
Sbjct: 254 VPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHWEELQSQR 313

Query: 302 ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAK 361
           +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+K
Sbjct: 314 DTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDIKDNEEFSK 373

Query: 362 HDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSDA 404
           H EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS++
Sbjct: 374 HGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNS 412

BLAST of Lsi05G010220 vs. TAIR 10
Match: AT1G06190.1 (Rho termination factor )

HSP 1 Score: 233.4 bits (594), Expect = 3.2e-61
Identity = 183/411 (44.53%), Postives = 248/411 (60.34%), Query Frame = 0

Query: 2   GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGH 61
           G+ LSDSRC   S VS R  ++   S C +++ N  +K  P       +SF C+ASSGG+
Sbjct: 16  GYTLSDSRCFFNSAVSRRTLAILPCSSCLDHK-NGRLKSVPNR-----SSFVCRASSGGY 75

Query: 62  RRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATPG 121
           RRNPDFS+ N+HG+ R  NRQ+  RE+ + ++ +D+LSS+NGPL ++SS+PK QAT++PG
Sbjct: 76  RRNPDFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNLSSSPKFQATSSPG 135

Query: 122 PREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGQTKGSETVDSLLKLLRKHSVEQGK 181
           PREKEIVELFRKVQAQLR R AA KEEKK+E  ++GQ K SETVDSLLKLLRKHS EQ K
Sbjct: 136 PREKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLLRKHSGEQSK 195

Query: 182 RSSGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQR 241
           R            F      +    D+   T     S N    A     SF+RP S+F+R
Sbjct: 196 R--------QVSKFSSQGEVQGDTVDKQDRTGNLVTSGNKDNNA----SSFTRPTSSFRR 255

Query: 242 KSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQ 301
           KSPVPR +  P Y  E+  D      S    +  T+     K  V    E E E   E +
Sbjct: 256 KSPVPRSQSPPAYSSEATFD-----QSSSYSVTWTQK----KDTVELHDEPEHEPAYEHE 315

Query: 302 SQGETEQEPEP-----DQEYELEPEAESYELDHEPDEMEPELVN----LLGVSSDVDNTF 361
            + E E EP P     + + EL+PE+ S+  + E D++  ++++    +L V SD D + 
Sbjct: 316 HEPENESEPGPVTTMLEPDSELKPESSSFYQEEEDDDVTFDVLSQDDGILDVLSDDDESL 375

Query: 362 EDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLL 401
           +D  +D+++ A+ +  +DL+ LKL ELR IAKSR LKG SKMKK+ELV+LL
Sbjct: 376 DDADEDSDE-AEEEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVELL 396

BLAST of Lsi05G010220 vs. TAIR 10
Match: AT1G06190.2 (Rho termination factor )

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-47
Identity = 129/262 (49.24%), Postives = 166/262 (63.36%), Query Frame = 0

Query: 2   GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGH 61
           G+ LSDSRC   S VS R  ++   S C +++ N  +K  P       +SF C+ASSGG+
Sbjct: 16  GYTLSDSRCFFNSAVSRRTLAILPCSSCLDHK-NGRLKSVPNR-----SSFVCRASSGGY 75

Query: 62  RRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISSTPKSQATATPG 121
           RRNPDFS+ N+HG+ R  NRQ+  RE+ + ++ +D+LSS+NGPL ++SS+PK QAT++PG
Sbjct: 76  RRNPDFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNLSSSPKFQATSSPG 135

Query: 122 PREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGQTKGSETVDSLLKLLRKHSVEQGK 181
           PREKEIVELFRKVQAQLR R AA KEEKK+E  ++GQ K SETVDSLLKLLRKHS EQ K
Sbjct: 136 PREKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLLRKHSGEQSK 195

Query: 182 RSSGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQR 241
           R            F      +    D+   T     S N    A     SF+RP S+F+R
Sbjct: 196 R--------QVSKFSSQGEVQGDTVDKQDRTGNLVTSGNKDNNA----SSFTRPTSSFRR 255

Query: 242 KSPVPRVKYQPIYPGESIVDST 261
           KSPVPR +  P Y  E+  D +
Sbjct: 256 KSPVPRSQSPPAYSSEATFDQS 257

BLAST of Lsi05G010220 vs. TAIR 10
Match: AT2G31150.1 (ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism )

HSP 1 Score: 114.4 bits (285), Expect = 2.2e-25
Identity = 125/322 (38.82%), Postives = 165/322 (51.24%), Query Frame = 0

Query: 61  HRR-NPDFSKQNRHGFSRSRNRQNEERENL-ENVDETDLLSSKNGPLLSISSTPKSQATA 120
           HRR NPDFS+ N+HGF R RNR+NE+++ L +   E D+LSSKN                
Sbjct: 26  HRRNNPDFSRNNKHGF-RGRNRRNEDKDGLVDGGLEDDMLSSKN---------------- 85

Query: 121 TPGPREKEIVELFRKVQAQLRER-AAMKEEKKMEAQGQTKG---SETVDSLLKLLRKHSV 180
                EKEIVELF+KVQ QLR R AA KEEKK E   + +G   SETVDSLLKLLRKHS 
Sbjct: 86  -----EKEIVELFKKVQVQLRARAAAKKEEKKTEEASKGQGGKESETVDSLLKLLRKHSG 145

Query: 181 EQGKRSSGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVS 240
           EQ K+              FN  K+    D+         S             F+RP S
Sbjct: 146 EQSKKQVS----------NFNSEKQLQRDDDASERQNHSSSRFDSRNKDHNATPFTRPAS 205

Query: 241 NFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHW 300
           +F+R SPVPR K Q  Y  E+I D               EA S+  +  WT+++      
Sbjct: 206 SFKRNSPVPRHKSQASYSSEAIFD---------------EASSY--SVTWTQKK------ 265

Query: 301 EELQSQGETEQEPEPDQ--EYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTF--- 360
           ++++S+ E E EPEP+   EY+ EPE E+   ++EP E EPEL  L  VS     +F   
Sbjct: 266 DQVESRDEPEYEPEPESAAEYD-EPEPEA---EYEP-ESEPELAILESVSELKLESFYQE 287

Query: 361 EDDVKDNEKFAKHDEHEDLNSL 372
           ED+ +++  F   +  +D  SL
Sbjct: 326 EDEDEEDHNFVIDELSDDDESL 287

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q94K754.5e-6044.53Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Q8L4E72.0e-3636.80SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV... [more]
Match NameE-valueIdentityDescription
A0A5D3DAG17.9e-18586.60Rho-N domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S4DXI11.0e-18486.82rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3... [more]
A0A1S3BHF21.0e-18486.82rho-N domain-containing protein 1, chloroplastic isoform X7 OS=Cucumis melo OX=3... [more]
A0A1S4DWS11.0e-18486.82rho-N domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3... [more]
A0A1S4DWR71.0e-18486.82rho-N domain-containing protein 1, chloroplastic isoform X2 OS=Cucumis melo OX=3... [more]
Match NameE-valueIdentityDescription
XP_038887988.11.2e-19592.61rho-N domain-containing protein 1, chloroplastic-like isoform X1 [Benincasa hisp... [more]
XP_038887989.16.6e-19492.33rho-N domain-containing protein 1, chloroplastic-like isoform X2 [Benincasa hisp... [more]
KAA0038048.11.6e-18486.60rho-N domain-containing protein 1 [Cucumis melo var. makuwa] >TYK20556.1 rho-N d... [more]
XP_016900423.12.1e-18486.82PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis ... [more]
XP_008447421.12.1e-18486.82PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X7 [Cucumis ... [more]
Match NameE-valueIdentityDescription
AT1G06190.13.2e-6144.53Rho termination factor [more]
AT1G06190.21.5e-4749.24Rho termination factor [more]
AT2G31150.12.2e-2538.82ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative ... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..118
NoneNo IPR availablePANTHERPTHR34449RHO TERMINATION FACTORcoord: 2..404
NoneNo IPR availablePANTHERPTHR34449:SF5RHO-N DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTICcoord: 2..404
IPR011112Rho termination factor, N-terminalSMARTSM00959Rho_N_2_acoord: 367..405
e-value: 0.0012
score: 28.1
IPR011112Rho termination factor, N-terminalPFAMPF07498Rho_Ncoord: 367..402
e-value: 3.6E-7
score: 30.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G010220.1Lsi05G010220.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006353 DNA-templated transcription, termination