Lsi05G010110 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G010110
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ethylene-responsive transcription factor 1B-like
Location	chr05: 17588315 .. 17588989 (+)
RNA-Seq Expression	Lsi05G010110
Synteny	Lsi05G010110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCTCTTACTTTTCGTTTTCCGATTCGGATTTCTCGACGGAATCTTCATTCGGATCAACGGAATCATCGTTCTCATGGAGTGAATTTTTCTCGATCCAAAGTACCCTAGAAAACTCAATCTCACTACACGAAGAATTTCTCGGGAATCAAACATCGGAATCGGAATCGAAAATTGTAGTGAAGGAAGAAATCGAAGTGAGTTCGATTGATTTCGAGGAGGAGAAACAGAGGAAGACGACGGAGAAGAGTTACAGAGGAGTGAGACGACGGCCGTGGGGGAAATACGCGGCGGAGATTAGGGATTCGACGAGGCATGGAGTTAGGGTTTGGCTTGGAACTTTTGATAGCGCTGAAGCTGCGGCTTTAGCTTACGATCAAGCGGCATTTTCGATGAGAGGAGCAATGGCGGTGCTAAATTTTCCGGTGGAAATGGTGAGGGAATCACTGCAGGATATTAAGTATCAACTGGAAGAAGGATGTTCGCCGGTGGTGGCTTTGAAAAGGAAACACTCAATGAGAAGGAAGTCGGCGGCGGCGGGGGCGGCGGTGGAGAAAAAGAAGATGAAGAGAAAGAACAATGTGGTGATTTTGGAAGATCTGGGAACAGAGTATTTGGAAGAACTTTTGATGCTAAGTTCATGTGAGAGTAGTAGTGTTAATCCTTTCTAA

mRNA sequence

ATGGAATCCTCTTACTTTTCGTTTTCCGATTCGGATTTCTCGACGGAATCTTCATTCGGATCAACGGAATCATCGTTCTCATGGAGTGAATTTTTCTCGATCCAAAGTACCCTAGAAAACTCAATCTCACTACACGAAGAATTTCTCGGGAATCAAACATCGGAATCGGAATCGAAAATTGTAGTGAAGGAAGAAATCGAAGTGAGTTCGATTGATTTCGAGGAGGAGAAACAGAGGAAGACGACGGAGAAGAGTTACAGAGGAGTGAGACGACGGCCGTGGGGGAAATACGCGGCGGAGATTAGGGATTCGACGAGGCATGGAGTTAGGGTTTGGCTTGGAACTTTTGATAGCGCTGAAGCTGCGGCTTTAGCTTACGATCAAGCGGCATTTTCGATGAGAGGAGCAATGGCGGTGCTAAATTTTCCGGTGGAAATGGTGAGGGAATCACTGCAGGATATTAAGTATCAACTGGAAGAAGGATGTTCGCCGGTGGTGGCTTTGAAAAGGAAACACTCAATGAGAAGGAAGTCGGCGGCGGCGGGGGCGGCGGTGGAGAAAAAGAAGATGAAGAGAAAGAACAATGTGGTGATTTTGGAAGATCTGGGAACAGAGTATTTGGAAGAACTTTTGATGCTAAGTTCATGTGAGAGTAGTAGTGTTAATCCTTTCTAA

Coding sequence (CDS)

ATGGAATCCTCTTACTTTTCGTTTTCCGATTCGGATTTCTCGACGGAATCTTCATTCGGATCAACGGAATCATCGTTCTCATGGAGTGAATTTTTCTCGATCCAAAGTACCCTAGAAAACTCAATCTCACTACACGAAGAATTTCTCGGGAATCAAACATCGGAATCGGAATCGAAAATTGTAGTGAAGGAAGAAATCGAAGTGAGTTCGATTGATTTCGAGGAGGAGAAACAGAGGAAGACGACGGAGAAGAGTTACAGAGGAGTGAGACGACGGCCGTGGGGGAAATACGCGGCGGAGATTAGGGATTCGACGAGGCATGGAGTTAGGGTTTGGCTTGGAACTTTTGATAGCGCTGAAGCTGCGGCTTTAGCTTACGATCAAGCGGCATTTTCGATGAGAGGAGCAATGGCGGTGCTAAATTTTCCGGTGGAAATGGTGAGGGAATCACTGCAGGATATTAAGTATCAACTGGAAGAAGGATGTTCGCCGGTGGTGGCTTTGAAAAGGAAACACTCAATGAGAAGGAAGTCGGCGGCGGCGGGGGCGGCGGTGGAGAAAAAGAAGATGAAGAGAAAGAACAATGTGGTGATTTTGGAAGATCTGGGAACAGAGTATTTGGAAGAACTTTTGATGCTAAGTTCATGTGAGAGTAGTAGTGTTAATCCTTTCTAA

Protein sequence

MESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKIVVKEEIEVSSIDFEEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKSAAAGAAVEKKKMKRKNNVVILEDLGTEYLEELLMLSSCESSSVNPF

Homology

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BLAST of Lsi05G010110 vs. ExPASy Swiss-Prot
Match: A0A3Q7I5Y9 (Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-42
Identity = 102/184 (55.43%), Postives = 138/184 (75.00%), Query Frame = 0


Query: 32  FSIQSTLENSI-SLHEEFLGNQTSESESKIVVKEEIEVSSIDFEEEKQRKTTEKSYRGVR 91
           F++  T +  + +L  E    +T  S S   +KEE EV+S  +EEE++    +K+YRGVR
Sbjct: 18  FNVNDTQDMLLYNLVAEGSSQETVNSSSSYGIKEE-EVTS--YEEERK----DKNYRGVR 77

Query: 92  RRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFPVEMVRES 151
           +RPWGKYAAEIRDSTR+GVRVWLGTFD+AE AALAYDQAAF+MRG+MA+LNFPVE+V+ES
Sbjct: 78  KRPWGKYAAEIRDSTRNGVRVWLGTFDNAEEAALAYDQAAFAMRGSMAILNFPVEIVKES 137

Query: 152 LQDIKYQLEEGCSPVVALKRKHSMRRKSAAAGAAVEKKKMKRKNNVVILEDLGTEYLEEL 211
           L ++K + +  CSPV+ LK+++SMRRKS +       +K + + +VV+ EDLG EYLEEL
Sbjct: 138 LNEMKCRFDGNCSPVIELKKRYSMRRKSVS-------RKNRARKDVVVFEDLGAEYLEEL 187

Query: 212 LMLS 215
           L+ S
Sbjct: 198 LISS 187

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BLAST of Lsi05G010110 vs. ExPASy Swiss-Prot
Match: Q8LDC8 (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 6.8e-42
Identity = 112/216 (51.85%), Postives = 141/216 (65.28%), Query Frame = 0


Query: 11  SDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKIVVKEEIEVSS 70
           S FS E S GS+  SFS        S+  N+ SL   F  N + E     ++++  + + 
Sbjct: 11  SGFSPEYSIGSSPDSFS--------SSSSNNYSL--PFNENDSEEMFLYGLIEQSTQQTY 70

Query: 71  IDFEEEK------QRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAAL 130
           ID + +         + +EKSYRGVRRRPWGK+AAEIRDSTR+G+RVWLGTF+SAE AAL
Sbjct: 71  IDSDSQDLPIKSVSSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAAL 130

Query: 131 AYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKSAAAGAA 190
           AYDQAAFSMRG+ A+LNF  E V+ESL +IKY  E+GCSPVVALKRKHSMRR+       
Sbjct: 131 AYDQAAFSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRR------- 190

Query: 191 VEKKKMK---------RKNNVVILEDLGTEYLEELL 212
           +  KK K         + +NVV+ EDLG +YLEELL
Sbjct: 191 MTNKKTKDSDFDHRSVKLDNVVVFEDLGEQYLEELL 209

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BLAST of Lsi05G010110 vs. ExPASy Swiss-Prot
Match: Q8VYM0 (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.5e-36
Identity = 104/238 (43.70%), Postives = 148/238 (62.18%), Query Frame = 0


Query: 11  SDFSTESSFGSTESSFSWSE--FFSIQSTLENSISLHEEFLGNQTSESESKIVVKEEIEV 70
           S +S+ SS+ S++ S  W+E  F    S  +     + ++  +  S    ++++KEEI+ 
Sbjct: 7   SMYSSPSSWSSSQESLLWNESCFLDQSSEPQAFFCPNYDYSDDFFSFESPEMMIKEEIQN 66

Query: 71  SSI--DFEEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAY 130
             +    EEEK     E+SYRGVR+RPWGK+AAEIRDSTR+G+RVWLGTFD AE AALAY
Sbjct: 67  GDVSNSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAY 126

Query: 131 DQAAFSMRGAMAVLNFPVEMVRESLQDIK-YQLEEGCSPVVALKRKHSMRRK-------- 190
           DQAAF+ +G++A LNFPVE+VRESL+ ++   L +G SPV+ALKRKHS+R +        
Sbjct: 127 DQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHSLRNRPRGKKRSS 186

Query: 191 -------------SAAAGAAVEKKKMKR------KNNVVILEDLGTEYLEELLMLSSC 217
                        S+++ ++  +   K+         +V+ EDLG EYLE+LLM SSC
Sbjct: 187 SSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGAEYLEQLLM-SSC 243

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BLAST of Lsi05G010110 vs. ExPASy Swiss-Prot
Match: Q9LND1 (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.7e-35
Identity = 103/249 (41.37%), Postives = 153/249 (61.45%), Query Frame = 0


Query: 2   ESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSI------SLHEEFLGNQTSE 61
           ++++ S   S  ++ SS  S++ SF W E F  QS  ++ +      +  ++F   ++S 
Sbjct: 4   QTNFLSGEFSPENSSSSSWSSQESFLWEESFLHQSFDQSFLLSSPTDNYCDDFFAFESS- 63

Query: 62  SESKIVVKEEIEVSSIDFEEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGT 121
                ++KEE + +++  EEE      EKSYRGVR+RPWGK+AAEIRDSTR G+RVWLGT
Sbjct: 64  -----IIKEEGKEATVAAEEE------EKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGT 123

Query: 122 FDSAEAAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIK-YQLEEGCSPVVALKRKHSM 181
           FD+AEAAALAYDQAAF+++G++AVLNFP ++V ESL+ ++   L +G SPV+ALKRKHSM
Sbjct: 124 FDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSM 183

Query: 182 RRK------------------------SAAAGAAVEKKKMKR--------KNNVVILEDL 212
           R +                        S+++ +++  +  K+           +V+LEDL
Sbjct: 184 RNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLEDL 240

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BLAST of Lsi05G010110 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.3e-24
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 0


Query: 84  KSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFP 143
           K YRGVRRRPWGKYAAEIRDS RHG RVWLGTF++AE AALAYD+AAF MRGA A+LNFP
Sbjct: 57  KKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFP 116

Query: 144 VEMVRESLQDIKYQL 159
            E+V  S+   K  L
Sbjct: 117 SEIVNASVSVDKLSL 131

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BLAST of Lsi05G010110 vs. ExPASy TrEMBL
Match: A0A5A7T5F2 (Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001090 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.1e-98
Identity = 205/225 (91.11%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKI 60
           MESSYFSFSDSDFSTESSFGS ESSFSWSEFFSI S LENS  + EEFLGNQ SESESKI
Sbjct: 1   MESSYFSFSDSDFSTESSFGSVESSFSWSEFFSIHSALENSTGV-EEFLGNQKSESESKI 60

Query: 61  VVKEEIEVSSIDFEEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEEIEV+SIDF+EEKQRKTTEK+YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFKEEKQRKTTEKNYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKS-A 180
           AAALAYDQAAFSMRG MAVLNFPVEMVRESLQDI+YQLEEGCSPVVALK+KHSMRRKS A
Sbjct: 121 AAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYQLEEGCSPVVALKKKHSMRRKSVA 180

Query: 181 AAGAAVEKKKMKRKNNVVILEDLGTEYLEELLMLSSCESSSVNPF 225
           AA AAVEKKKMK+KNNVVILEDLGTEYLEELLMLSSCE  S+NPF
Sbjct: 181 AATAAVEKKKMKKKNNVVILEDLGTEYLEELLMLSSCE--SINPF 222

[Close]

BLAST of Lsi05G010110 vs. ExPASy TrEMBL
Match: A0A1S3BHE9 (ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC103489880 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.1e-98
Identity = 205/225 (91.11%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKI 60
           MESSYFSFSDSDFSTESSFGS ESSFSWSEFFSI S LENS  + EEFLGNQ SESESKI
Sbjct: 1   MESSYFSFSDSDFSTESSFGSVESSFSWSEFFSIHSALENSTGV-EEFLGNQKSESESKI 60

Query: 61  VVKEEIEVSSIDFEEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEEIEV+SIDF+EEKQRKTTEK+YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFKEEKQRKTTEKNYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKS-A 180
           AAALAYDQAAFSMRG MAVLNFPVEMVRESLQDI+YQLEEGCSPVVALK+KHSMRRKS A
Sbjct: 121 AAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYQLEEGCSPVVALKKKHSMRRKSVA 180

Query: 181 AAGAAVEKKKMKRKNNVVILEDLGTEYLEELLMLSSCESSSVNPF 225
           AA AAVEKKKMK+KNNVVILEDLGTEYLEELLMLSSCE  S+NPF
Sbjct: 181 AATAAVEKKKMKKKNNVVILEDLGTEYLEELLMLSSCE--SINPF 222

[Close]

BLAST of Lsi05G010110 vs. ExPASy TrEMBL
Match: A0A0A0L7G2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G389850 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 197/223 (88.34%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKI 60
           MESSYFSFSDSDFST+SSFGSTESSFSW++F SI S LENSI + EEFLG Q  +SESKI
Sbjct: 1   MESSYFSFSDSDFSTDSSFGSTESSFSWTDFLSIHSALENSIGI-EEFLGKQKLDSESKI 60

Query: 61  VVKEEIEVSSIDFEEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEEIEV+SIDF+EEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKS-- 180
           AAALAYDQAAFSMRG MAVLNFPVEMVRESLQDI+Y+LEEGCSPVVALKRKHSMRRKS  
Sbjct: 121 AAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVA 180

Query: 181 -AAAGAAVEKKKMKRKNNVVILEDLGTEYLEELLMLSSCESSS 221
            A A  AVEKKKMK+KNNVVILEDLGTEYLEELLMLSSCES+S
Sbjct: 181 AATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSSCESTS 222

[Close]

BLAST of Lsi05G010110 vs. ExPASy TrEMBL
Match: A0A6J1HV48 (ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111467117 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.4e-90
Identity = 197/226 (87.17%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKI 60
           MESSYFSFSDSDFST SSFGS ESSFSWSEFF         I L +EFLGNQT ESESKI
Sbjct: 1   MESSYFSFSDSDFSTGSSFGSAESSFSWSEFF--------PIPLPDEFLGNQT-ESESKI 60

Query: 61  VVKEEIEVSSIDFEEEKQRKTT-EKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA 120
            VKEEIEVSSIDF EEKQRKTT EKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA
Sbjct: 61  AVKEEIEVSSIDFAEEKQRKTTAEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA 120

Query: 121 EAAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKSA 180
           EAAALAYDQAAFSMRGA+AVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHS+RRKSA
Sbjct: 121 EAAALAYDQAAFSMRGALAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSLRRKSA 180

Query: 181 A-AGAAVEKKKMKRKNNVVILEDLGTEYLEELLMLSSCESSSVNPF 225
           A A AAVEKKKMK+K N+VI EDLGTEYLEELLMLSS ES S+NPF
Sbjct: 181 AEAAAAVEKKKMKKKKNMVIFEDLGTEYLEELLMLSSYESCSINPF 217

[Close]

BLAST of Lsi05G010110 vs. ExPASy TrEMBL
Match: A0A6J1HH44 (ethylene-responsive transcription factor 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111464002 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 6.9e-90
Identity = 196/225 (87.11%), Postives = 202/225 (89.78%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKI 60
           MESSYFSFSDSDFST SSFGS ESSFSWSEFF         I L +EFLGNQ  ESESKI
Sbjct: 1   MESSYFSFSDSDFSTGSSFGSAESSFSWSEFF--------PIPLPDEFLGNQ-PESESKI 60

Query: 61  VVKEEIEVSSIDFEEEKQRKTT-EKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA 120
            VKEEIEVSSIDF EEKQRKTT EKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA
Sbjct: 61  AVKEEIEVSSIDFAEEKQRKTTAEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA 120

Query: 121 EAAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKSA 180
           EAAALAYDQAAFSMRGA+AVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHS+RRKSA
Sbjct: 121 EAAALAYDQAAFSMRGALAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSLRRKSA 180

Query: 181 AAGAAVEKKKMKRKNNVVILEDLGTEYLEELLMLSSCESSSVNPF 225
           AA AAVEKKKMK+K N+VI EDLGTEYLEELLMLSS ES S+NPF
Sbjct: 181 AA-AAVEKKKMKKKKNMVIFEDLGTEYLEELLMLSSYESCSINPF 215

[Close]

BLAST of Lsi05G010110 vs. NCBI nr
Match: XP_008447432.1 (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo] >KAA0038078.1 ethylene-responsive transcription factor 1B-like [Cucumis melo var. makuwa] >TYK20527.1 ethylene-responsive transcription factor 1B-like [Cucumis melo var. makuwa])

HSP 1 Score: 367.5 bits (942), Expect = 8.4e-98
Identity = 205/225 (91.11%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKI 60
           MESSYFSFSDSDFSTESSFGS ESSFSWSEFFSI S LENS  + EEFLGNQ SESESKI
Sbjct: 1   MESSYFSFSDSDFSTESSFGSVESSFSWSEFFSIHSALENSTGV-EEFLGNQKSESESKI 60

Query: 61  VVKEEIEVSSIDFEEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEEIEV+SIDF+EEKQRKTTEK+YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFKEEKQRKTTEKNYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKS-A 180
           AAALAYDQAAFSMRG MAVLNFPVEMVRESLQDI+YQLEEGCSPVVALK+KHSMRRKS A
Sbjct: 121 AAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYQLEEGCSPVVALKKKHSMRRKSVA 180

Query: 181 AAGAAVEKKKMKRKNNVVILEDLGTEYLEELLMLSSCESSSVNPF 225
           AA AAVEKKKMK+KNNVVILEDLGTEYLEELLMLSSCE  S+NPF
Sbjct: 181 AATAAVEKKKMKKKNNVVILEDLGTEYLEELLMLSSCE--SINPF 222

[Close]

BLAST of Lsi05G010110 vs. NCBI nr
Match: XP_038888342.1 (ethylene-response factor C3-like [Benincasa hispida])

HSP 1 Score: 364.0 bits (933), Expect = 9.3e-97
Identity = 202/224 (90.18%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKI 60
           MESSYFSF DSDFS E+SFGSTESSFSW+EFF        SISL EEF+GNQTSESESKI
Sbjct: 1   MESSYFSFIDSDFSPETSFGSTESSFSWNEFF--------SISLQEEFIGNQTSESESKI 60

Query: 61  VVKEEIEVSSIDFEEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEEIEV+SIDFEEEK RKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFEEEKHRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKSAA 180
           AAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKS+A
Sbjct: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKSSA 180

Query: 181 AGAAVEKKKMKRKNNVVILEDLGTEYLEELLMLSSCESSSVNPF 225
           A AAVEKKKMK+KNNVVILEDLGTEYLEELLMLSSCE  S+NPF
Sbjct: 181 ATAAVEKKKMKKKNNVVILEDLGTEYLEELLMLSSCE--SLNPF 214

[Close]

BLAST of Lsi05G010110 vs. NCBI nr
Match: XP_004151982.1 (ethylene-response factor C3 [Cucumis sativus])

HSP 1 Score: 355.9 bits (912), Expect = 2.5e-94
Identity = 197/223 (88.34%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKI 60
           MESSYFSFSDSDFST+SSFGSTESSFSW++F SI S LENSI + EEFLG Q  +SESKI
Sbjct: 1   MESSYFSFSDSDFSTDSSFGSTESSFSWTDFLSIHSALENSIGI-EEFLGKQKLDSESKI 60

Query: 61  VVKEEIEVSSIDFEEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEEIEV+SIDF+EEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKS-- 180
           AAALAYDQAAFSMRG MAVLNFPVEMVRESLQDI+Y+LEEGCSPVVALKRKHSMRRKS  
Sbjct: 121 AAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVA 180

Query: 181 -AAAGAAVEKKKMKRKNNVVILEDLGTEYLEELLMLSSCESSS 221
            A A  AVEKKKMK+KNNVVILEDLGTEYLEELLMLSSCES+S
Sbjct: 181 AATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSSCESTS 222

[Close]

BLAST of Lsi05G010110 vs. NCBI nr
Match: KAE8650665.1 (hypothetical protein Csa_011527 [Cucumis sativus])

HSP 1 Score: 350.9 bits (899), Expect = 8.1e-93
Identity = 194/219 (88.58%), Postives = 204/219 (93.15%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKI 60
           MESSYFSFSDSDFST+SSFGSTESSFSW++F SI S LENSI + EEFLG Q  +SESKI
Sbjct: 1   MESSYFSFSDSDFSTDSSFGSTESSFSWTDFLSIHSALENSIGI-EEFLGKQKLDSESKI 60

Query: 61  VVKEEIEVSSIDFEEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VVKEEIEV+SIDF+EEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKS-- 180
           AAALAYDQAAFSMRG MAVLNFPVEMVRESLQDI+Y+LEEGCSPVVALKRKHSMRRKS  
Sbjct: 121 AAALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVA 180

Query: 181 -AAAGAAVEKKKMKRKNNVVILEDLGTEYLEELLMLSSC 217
            A A  AVEKKKMK+KNNVVILEDLGTEYLEELLMLSSC
Sbjct: 181 AATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSSC 218

[Close]

BLAST of Lsi05G010110 vs. NCBI nr
Match: XP_022967675.1 (ethylene-responsive transcription factor 1B-like [Cucurbita maxima])

HSP 1 Score: 342.4 bits (877), Expect = 2.9e-90
Identity = 197/226 (87.17%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKI 60
           MESSYFSFSDSDFST SSFGS ESSFSWSEFF         I L +EFLGNQT ESESKI
Sbjct: 1   MESSYFSFSDSDFSTGSSFGSAESSFSWSEFF--------PIPLPDEFLGNQT-ESESKI 60

Query: 61  VVKEEIEVSSIDFEEEKQRKTT-EKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA 120
            VKEEIEVSSIDF EEKQRKTT EKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA
Sbjct: 61  AVKEEIEVSSIDFAEEKQRKTTAEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA 120

Query: 121 EAAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKSA 180
           EAAALAYDQAAFSMRGA+AVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHS+RRKSA
Sbjct: 121 EAAALAYDQAAFSMRGALAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSLRRKSA 180

Query: 181 A-AGAAVEKKKMKRKNNVVILEDLGTEYLEELLMLSSCESSSVNPF 225
           A A AAVEKKKMK+K N+VI EDLGTEYLEELLMLSS ES S+NPF
Sbjct: 181 AEAAAAVEKKKMKKKKNMVIFEDLGTEYLEELLMLSSYESCSINPF 217

[Close]

BLAST of Lsi05G010110 vs. TAIR 10
Match: AT3G23240.1 (ethylene response factor 1 )

HSP 1 Score: 172.2 bits (435), Expect = 4.8e-43
Identity = 112/216 (51.85%), Postives = 141/216 (65.28%), Query Frame = 0


Query: 11  SDFSTESSFGSTESSFSWSEFFSIQSTLENSISLHEEFLGNQTSESESKIVVKEEIEVSS 70
           S FS E S GS+  SFS        S+  N+ SL   F  N + E     ++++  + + 
Sbjct: 11  SGFSPEYSIGSSPDSFS--------SSSSNNYSL--PFNENDSEEMFLYGLIEQSTQQTY 70

Query: 71  IDFEEEK------QRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAAL 130
           ID + +         + +EKSYRGVRRRPWGK+AAEIRDSTR+G+RVWLGTF+SAE AAL
Sbjct: 71  IDSDSQDLPIKSVSSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAAL 130

Query: 131 AYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKSAAAGAA 190
           AYDQAAFSMRG+ A+LNF  E V+ESL +IKY  E+GCSPVVALKRKHSMRR+       
Sbjct: 131 AYDQAAFSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRR------- 190

Query: 191 VEKKKMK---------RKNNVVILEDLGTEYLEELL 212
           +  KK K         + +NVV+ EDLG +YLEELL
Sbjct: 191 MTNKKTKDSDFDHRSVKLDNVVVFEDLGEQYLEELL 209

[Close]

BLAST of Lsi05G010110 vs. TAIR 10
Match: AT2G31230.1 (ethylene-responsive element binding factor 15 )

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-37
Identity = 104/238 (43.70%), Postives = 148/238 (62.18%), Query Frame = 0


Query: 11  SDFSTESSFGSTESSFSWSE--FFSIQSTLENSISLHEEFLGNQTSESESKIVVKEEIEV 70
           S +S+ SS+ S++ S  W+E  F    S  +     + ++  +  S    ++++KEEI+ 
Sbjct: 7   SMYSSPSSWSSSQESLLWNESCFLDQSSEPQAFFCPNYDYSDDFFSFESPEMMIKEEIQN 66

Query: 71  SSI--DFEEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAY 130
             +    EEEK     E+SYRGVR+RPWGK+AAEIRDSTR+G+RVWLGTFD AE AALAY
Sbjct: 67  GDVSNSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAY 126

Query: 131 DQAAFSMRGAMAVLNFPVEMVRESLQDIK-YQLEEGCSPVVALKRKHSMRRK-------- 190
           DQAAF+ +G++A LNFPVE+VRESL+ ++   L +G SPV+ALKRKHS+R +        
Sbjct: 127 DQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHSLRNRPRGKKRSS 186

Query: 191 -------------SAAAGAAVEKKKMKR------KNNVVILEDLGTEYLEELLMLSSC 217
                        S+++ ++  +   K+         +V+ EDLG EYLE+LLM SSC
Sbjct: 187 SSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGAEYLEQLLM-SSC 243

[Close]

BLAST of Lsi05G010110 vs. TAIR 10
Match: AT1G06160.1 (octadecanoid-responsive Arabidopsis AP2/ERF 59 )

HSP 1 Score: 149.4 bits (376), Expect = 3.3e-36
Identity = 103/249 (41.37%), Postives = 153/249 (61.45%), Query Frame = 0


Query: 2   ESSYFSFSDSDFSTESSFGSTESSFSWSEFFSIQSTLENSI------SLHEEFLGNQTSE 61
           ++++ S   S  ++ SS  S++ SF W E F  QS  ++ +      +  ++F   ++S 
Sbjct: 4   QTNFLSGEFSPENSSSSSWSSQESFLWEESFLHQSFDQSFLLSSPTDNYCDDFFAFESS- 63

Query: 62  SESKIVVKEEIEVSSIDFEEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGT 121
                ++KEE + +++  EEE      EKSYRGVR+RPWGK+AAEIRDSTR G+RVWLGT
Sbjct: 64  -----IIKEEGKEATVAAEEE------EKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGT 123

Query: 122 FDSAEAAALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIK-YQLEEGCSPVVALKRKHSM 181
           FD+AEAAALAYDQAAF+++G++AVLNFP ++V ESL+ ++   L +G SPV+ALKRKHSM
Sbjct: 124 FDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSM 183

Query: 182 RRK------------------------SAAAGAAVEKKKMKR--------KNNVVILEDL 212
           R +                        S+++ +++  +  K+           +V+LEDL
Sbjct: 184 RNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLEDL 240

[Close]

BLAST of Lsi05G010110 vs. TAIR 10
Match: AT5G43410.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 3.6e-22
Identity = 65/126 (51.59%), Postives = 75/126 (59.52%), Query Frame = 0


Query: 86  YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFPVE 145
           YRGVRRRPWGKYAAEIRDS +HG RVWLGTFD+AE AA AYDQAA+SMRG  A+LNFP E
Sbjct: 15  YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPHE 74

Query: 146 MVRESLQDIKYQLEEGCSPVVALKRKHSMRRKSAAAGAAVEKKKMKRKNNVVILEDLGTE 205
                     Y +  G S   A+         SA+A A+   ++      V   E L   
Sbjct: 75  ----------YNMGSGVSSSTAMAGS-----SSASASASSSSRQ------VFEFEYLDDS 119

Query: 206 YLEELL 212
            LEELL
Sbjct: 135 VLEELL 119

[Close]

BLAST of Lsi05G010110 vs. TAIR 10
Match: AT1G04370.1 (Ethylene-responsive element binding factor 14 )

HSP 1 Score: 102.1 bits (253), Expect = 6.1e-22
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 86  YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFPVE 145
           YRGVRRRPWGKYAAEIRDS +HG RVWLGTFD+AE AA AYD+AA+SMRG  A+LNFP E
Sbjct: 20  YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHE 79

The following BLAST results are available for this feature:

BLAST of Lsi05G010110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A3Q7I5Y9	1.0e-42	55.43	Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1	[more]
Q8LDC8	6.8e-42	51.85	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q8VYM0	2.5e-36	43.70	Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9LND1	4.7e-35	41.37	Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 ...	[more]
O04681	8.3e-24	73.33	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]

BLAST of Lsi05G010110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T5F2	4.1e-98	91.11	Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BHE9	4.1e-98	91.11	ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0L7G2	1.2e-94	88.34	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G389850 PE=...	[more]
A0A6J1HV48	1.4e-90	87.17	ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1HH44	6.9e-90	87.11	ethylene-responsive transcription factor 1B-like OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of Lsi05G010110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447432.1	8.4e-98	91.11	PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo] >KAA0...	[more]
XP_038888342.1	9.3e-97	90.18	ethylene-response factor C3-like [Benincasa hispida]	[more]
XP_004151982.1	2.5e-94	88.34	ethylene-response factor C3 [Cucumis sativus]	[more]
KAE8650665.1	8.1e-93	88.58	hypothetical protein Csa_011527 [Cucumis sativus]	[more]
XP_022967675.1	2.9e-90	87.17	ethylene-responsive transcription factor 1B-like [Cucurbita maxima]	[more]

BLAST of Lsi05G010110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23240.1	4.8e-43	51.85	ethylene response factor 1	[more]
AT2G31230.1	1.8e-37	43.70	ethylene-responsive element binding factor 15	[more]
AT1G06160.1	3.3e-36	41.37	octadecanoid-responsive Arabidopsis AP2/ERF 59	[more]
AT5G43410.1	3.6e-22	51.59	Integrase-type DNA-binding superfamily protein	[more]
AT1G04370.1	6.1e-22	80.00	Ethylene-responsive element binding factor 14	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 109..125 score: 65.88 coord: 86..97 score: 71.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 85..149 e-value: 6.7E-36 score: 135.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 85..135 e-value: 1.2E-14 score: 54.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 85..143 score: 23.037476
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 84..144 e-value: 1.59052E-20 score: 79.6231
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 84..145 e-value: 2.6E-26 score: 93.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR31190:SF132	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B	coord: 41..213
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 41..213
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 85..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G010110.1	Lsi05G010110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity