Lsi05G010040 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G010040
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	LOB domain-containing protein
Location	chr05: 17507404 .. 17508853 (-)
RNA-Seq Expression	Lsi05G010040
Synteny	Lsi05G010040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAATATCCCCTTTAACTCAAAAAAAAAATCTCTCTCTCACAATTATCAATTCCCAAACAAAAAGAAAAAAGAAAAGAAAAGAAAAGGAAGAAACAATGACGGGCTCTGGTTCTCCTTGTGGAGCTTGTAAATTCTTGAGAAGAAAATGTGTTAGAGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGAGCTACTCATTTTGCTGCCATTCATAAAGTTTTTGGAGCTAGTAATGTGTCTAAGCTTCTTGCTCGTCTTCCTATTAGTGAAAGATGTGAGGCTGCTGTTACTATTTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTTCAACAACAGGTCAATCCATCTTAAATTCCTTCTTTTTAATGTTTTTCGCTTCCATTCTAATAACGGGTCGAGTGAAAGATTCTAATTTTTTCACTTCTCGTAACGGTTACCGATGTTTTAACTAAATCCCTGTTTCATAACGGTTTTGTTTTTAGTTTCTGGCTCTTCAATCGCAATTTCTTTCTTCTGGGTTTTTCATTGAGAAAAAAACATTTGAATTGTGAGTCGAATACTAAAAACAATATATAACTGGTTTTGGTTTTCAAAAGTTTGGTTGGGTTTTGTAAAAAAGAAAGAAATTTGTATATATATATATGTGTAGGACTTAGGAGTGTAGTGTGTTTATAAAGTAAAATTTCCAAAATCTATTGTTTATCGAACAAAGGTTATGTTTTAATGTTGGCTATTAGTTATTGAAACCCTAATTCAGCTCCATTATTTTGTTTGGTTGGCCTTTACAGCTTAAGTGTTTAAATTTATAAGATTGAATTTCCTATAACTCATTAGCTTAAACTTTTGTTATTTGTTTTTTCAGGTTGTGAGTCTTCAGGCACAACTTGCTTCTTTGAAGGAACAAGCAGCGGAAAGCATTATGAACGCGTCCAGTAATGGAGGTGGAGTGAATGAGAAGATTAATAATAGAAAGGTTCCTTCTCATCCCCAAGATCTCCATAGTTGGTTTCAATCGGAGCAACCGAACGTAACACTCGAGTTCAATCCGAATCCAACTCCGAATAATAATTCAGCATCAAACCCTTATTATGATGAGAATTATTGCATTATGGTTAATTCACAATCTAATGGGAACTATGAACATCACATGACTAAAATGGAGGAAAGTGGATCATATGGAAGCTTTGAAGAAACCTCAGGCTATTCCATGTACACTCTTGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCAGTTGCTTTTGGCAACAGACATTGGTGAGAGAGAGCAAGAAAAAAAATGAAAAAAATGAAAAAGAAAAAGAGTTGCAATTGAAATTCATAGTTGGAAATTATTAATGGAAGTCCATTTCTATTTCTTTT

mRNA sequence

CATAATATCCCCTTTAACTCAAAAAAAAAATCTCTCTCTCACAATTATCAATTCCCAAACAAAAAGAAAAAAGAAAAGAAAAGAAAAGGAAGAAACAATGACGGGCTCTGGTTCTCCTTGTGGAGCTTGTAAATTCTTGAGAAGAAAATGTGTTAGAGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGAGCTACTCATTTTGCTGCCATTCATAAAGTTTTTGGAGCTAGTAATGTGTCTAAGCTTCTTGCTCGTCTTCCTATTAGTGAAAGATGTGAGGCTGCTGTTACTATTTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTTCAACAACAGGTTGTGAGTCTTCAGGCACAACTTGCTTCTTTGAAGGAACAAGCAGCGGAAAGCATTATGAACGCGTCCAGTAATGGAGGTGGAGTGAATGAGAAGATTAATAATAGAAAGGTTCCTTCTCATCCCCAAGATCTCCATAGTTGGTTTCAATCGGAGCAACCGAACGTAACACTCGAGTTCAATCCGAATCCAACTCCGAATAATAATTCAGCATCAAACCCTTATTATGATGAGAATTATTGCATTATGGTTAATTCACAATCTAATGGGAACTATGAACATCACATGACTAAAATGGAGGAAAGTGGATCATATGGAAGCTTTGAAGAAACCTCAGGCTATTCCATGTACACTCTTGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCAGTTGCTTTTGGCAACAGACATTGGTGAGAGAGAGCAAGAAAAAAAATGAAAAAAATGAAAAAGAAAAAGAGTTGCAATTGAAATTCATAGTTGGAAATTATTAATGGAAGTCCATTTCTATTTCTTTT

Coding sequence (CDS)

ATGACGGGCTCTGGTTCTCCTTGTGGAGCTTGTAAATTCTTGAGAAGAAAATGTGTTAGAGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGAGCTACTCATTTTGCTGCCATTCATAAAGTTTTTGGAGCTAGTAATGTGTCTAAGCTTCTTGCTCGTCTTCCTATTAGTGAAAGATGTGAGGCTGCTGTTACTATTTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTTCAACAACAGGTTGTGAGTCTTCAGGCACAACTTGCTTCTTTGAAGGAACAAGCAGCGGAAAGCATTATGAACGCGTCCAGTAATGGAGGTGGAGTGAATGAGAAGATTAATAATAGAAAGGTTCCTTCTCATCCCCAAGATCTCCATAGTTGGTTTCAATCGGAGCAACCGAACGTAACACTCGAGTTCAATCCGAATCCAACTCCGAATAATAATTCAGCATCAAACCCTTATTATGATGAGAATTATTGCATTATGGTTAATTCACAATCTAATGGGAACTATGAACATCACATGACTAAAATGGAGGAAAGTGGATCATATGGAAGCTTTGAAGAAACCTCAGGCTATTCCATGTACACTCTTGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCAGTTGCTTTTGGCAACAGACATTGGTGA

Protein sequence

MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGGGVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNSQSNGNYEHHMTKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRHW

Homology

[Close]

BLAST of Lsi05G010040 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.6e-50
Identity = 100/124 (80.65%), Postives = 111/124 (89.52%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTG GSPCGACKFLRRKCVRGCVFAPYFCHEQGA HFAAIHKVFGASNVSKLLA LP+++
Sbjct: 1   MTGFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLAD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESI----MNAS 120
           R EAAVTISYEAQARL+DPIYGCV+HIFALQQQV++LQAQLASLK  AA+ I    + A+
Sbjct: 61  RPEAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQGIHHQDVGAT 120

[Close]

BLAST of Lsi05G010040 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.1e-49
Identity = 109/199 (54.77%), Postives = 138/199 (69.35%), Query Frame = 0


Query: 2   TGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISER 61
           + SGSPCGACKFLRRKC +GCVFAPYFCHEQGA+HFAAIHKVFGASN SKLL+ LPIS+R
Sbjct: 6   SSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDR 65

Query: 62  CEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGGG 121
           CEAA+TISYEAQARLQDPIYGCVSHIFALQQQVV+LQA+L  LK+QAA+S++ A S    
Sbjct: 66  CEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS---P 125

Query: 122 VNEKINN-----RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSAS-NPYYDENYCI 181
            +E  N+      K P H    + +   +Q ++  +   + T  +  A+ + Y++E    
Sbjct: 126 TSENPNSYYGDTTKAPYHHDHQNIYHHHDQTHLVYQTGSSGTVQHGDATESSYHNETSSG 185

Query: 182 MVNSQSNGNYEHHMTKMEE 195
           M       + E H+    +
Sbjct: 186 MGEFSIYSDLEQHLNTFNQ 201

[Close]

BLAST of Lsi05G010040 vs. ExPASy Swiss-Prot
Match: Q9SLB6 (LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 7.5e-47
Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRR+CV+GCVFAPYFCHEQGA+HFAAIH+VFGASN SKLL+ LP+ +
Sbjct: 1   MTGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMED 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASS 118
           R EAA TI YEAQAR QDPIYGCVSHIF+LQQQVV+LQ QL  LK+QA +S+M   S
Sbjct: 61  RREAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMMAIDS 117

[Close]

BLAST of Lsi05G010040 vs. ExPASy Swiss-Prot
Match: Q9SJW5 (LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.9e-42
Identity = 97/186 (52.15%), Postives = 127/186 (68.28%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           M G GSPCG CKFLRRKCV GCVFAPYFC+E+G+++FAAIHKVFGASN SKL++ LP  +
Sbjct: 1   MGGLGSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGG 120
           RC+A  TISYEA +RL DPIYGCVS IF+LQQQVVSLQAQ+  L+E+A+        +  
Sbjct: 61  RCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASRRF---PQDDP 120

Query: 121 GVNEKINNRKVPSH-PQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNS 180
           G N K   + +    PQDLH+WF   Q  +  +F+P      ++  +  ++E+ C   +S
Sbjct: 121 GCNMKQQEKVLAQQMPQDLHNWF--HQGILDSDFDPMSGTTRDNERSMDHNESPC---SS 178

Query: 181 QSNGNY 186
             + NY
Sbjct: 181 NESLNY 178

[Close]

BLAST of Lsi05G010040 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.0e-40
Identity = 83/125 (66.40%), Postives = 96/125 (76.80%), Query Frame = 0


Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISERC 62
           G+GSPCGACKFLRRKC   C+FAPYF  EQGA  FAAIHKVFGASNVSKLL  +PI +RC
Sbjct: 11  GTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRC 70

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGGGV 122
           EA VTI+YEAQARL DP+YGCVSHIFALQQQV  LQ+Q+  +K Q A    +A+ +    
Sbjct: 71  EAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHS 130

Query: 123 NEKIN 128
           +E  N
Sbjct: 131 SESTN 135

[Close]

BLAST of Lsi05G010040 vs. ExPASy TrEMBL
Match: A0A1S3BHF9 (LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489890 PE=3 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.2e-125
Identity = 231/243 (95.06%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPI+E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSN G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNP-YYDENYCIMVNS 180
           GVNEKIN+RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180

Query: 181 QSNGNYE-HHMTKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGN 240
           QSNGNYE HH+ KMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSF++SADDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240

Query: 241 RHW 242
           RHW
Sbjct: 241 RHW 243

[Close]

BLAST of Lsi05G010040 vs. ExPASy TrEMBL
Match: A0A0A0L817 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G396920 PE=3 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.7e-124
Identity = 228/243 (93.83%), Postives = 235/243 (96.71%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPI+E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSN G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNP-YYDENYCIMVNS 180
           GVNEK+N+RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKVNSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNANYYDENYRIMVNS 180

Query: 181 QSNGNYE-HHMTKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGN 240
           QSNGNYE HH+ KMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSF+++ DDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDTVDDLQSVAFGN 240

Query: 241 RHW 242
           RHW
Sbjct: 241 RHW 243

[Close]

BLAST of Lsi05G010040 vs. ExPASy TrEMBL
Match: A0A6J1HQS1 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111466949 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.5e-119
Identity = 220/241 (91.29%), Postives = 225/241 (93.36%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP+SE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN S N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNSQ 180
              +  N+RKVP HPQDLHSWFQSEQPNV LEFNPNPT  NNSASNPYYDENY IMVNSQ
Sbjct: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNPYYDENYSIMVNSQ 180

Query: 181 SNGNYEHHMTKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRH 240
           SN NYEHHM KMEESGSYGSFEETSGYSMYTLD LHSNVQQWSFNESADDLQSVAFGNRH
Sbjct: 181 SNENYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRH 238

Query: 241 W 242
           W
Sbjct: 241 W 238

[Close]

BLAST of Lsi05G010040 vs. ExPASy TrEMBL
Match: A0A6J1HFS0 (LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111463902 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.5e-119
Identity = 220/241 (91.29%), Postives = 225/241 (93.36%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP+SE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN S N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNSQ 180
              +  N+RKVP HPQDLHSWFQSEQPNV LEFNPNPT  NNSASNPYYDENY IMVNSQ
Sbjct: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNPYYDENYSIMVNSQ 180

Query: 181 SNGNYEHHMTKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRH 240
           SN NYEHHM KMEESGSYGSFEETSGYSMYTLD LHSNVQQWSFNESADDLQSVAFGNRH
Sbjct: 181 SNENYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRH 238

Query: 241 W 242
           W
Sbjct: 241 W 238

[Close]

BLAST of Lsi05G010040 vs. ExPASy TrEMBL
Match: A0A5A7T7B7 (LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00850 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.9e-117
Identity = 221/243 (90.95%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPI+E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGG 120
           RCEAAVTISYEAQARLQDPIYGC          VVSLQAQLASLKEQAAESIMNASSN G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGC----------VVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNP-YYDENYCIMVNS 180
           GVNEKIN+RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180

Query: 181 QSNGNYE-HHMTKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGN 240
           QSNGNYE HH+ KMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSF++SADDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 233

Query: 241 RHW 242
           RHW
Sbjct: 241 RHW 233

[Close]

BLAST of Lsi05G010040 vs. NCBI nr
Match: XP_038888992.1 (LOB domain-containing protein 14-like [Benincasa hispida])

HSP 1 Score: 459.1 bits (1180), Expect = 2.3e-125
Identity = 232/245 (94.69%), Postives = 234/245 (95.51%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE
Sbjct: 26  MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 85

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNAS NGG
Sbjct: 86  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 145

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTP--NNNSASN--PYYDENYCIM 180
           GVNEKIN+RKVPSHPQDLHSWFQSEQPN+TLEFNP P P  NNNSASN   YYDENY IM
Sbjct: 146 GVNEKINSRKVPSHPQDLHSWFQSEQPNITLEFNPTPIPNNNNNSASNYPNYYDENYHIM 205

Query: 181 VNSQSNGNYEHHMTKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAF 240
           VNS SNGNYEHHM KMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAF
Sbjct: 206 VNSHSNGNYEHHMAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAF 265

Query: 241 GNRHW 242
           GNRHW
Sbjct: 266 GNRHW 270

[Close]

BLAST of Lsi05G010040 vs. NCBI nr
Match: XP_008447445.1 (PREDICTED: LOB domain-containing protein 29 [Cucumis melo])

HSP 1 Score: 457.6 bits (1176), Expect = 6.6e-125
Identity = 231/243 (95.06%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPI+E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSN G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNP-YYDENYCIMVNS 180
           GVNEKIN+RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180

Query: 181 QSNGNYE-HHMTKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGN 240
           QSNGNYE HH+ KMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSF++SADDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240

Query: 241 RHW 242
           RHW
Sbjct: 241 RHW 243

[Close]

BLAST of Lsi05G010040 vs. NCBI nr
Match: XP_004152038.1 (LOB domain-containing protein 29 [Cucumis sativus] >KGN57933.1 hypothetical protein Csa_010658 [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 5.6e-124
Identity = 228/243 (93.83%), Postives = 235/243 (96.71%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPI+E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSN G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNP-YYDENYCIMVNS 180
           GVNEK+N+RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKVNSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNANYYDENYRIMVNS 180

Query: 181 QSNGNYE-HHMTKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGN 240
           QSNGNYE HH+ KMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSF+++ DDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDTVDDLQSVAFGN 240

Query: 241 RHW 242
           RHW
Sbjct: 241 RHW 243

[Close]

BLAST of Lsi05G010040 vs. NCBI nr
Match: XP_022963632.1 (LOB domain-containing protein 29-like [Cucurbita moschata] >XP_022967412.1 LOB domain-containing protein 29-like [Cucurbita maxima] >KAG6571512.1 LOB domain-containing protein CRL1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011260.1 LOB domain-containing protein 29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 437.2 bits (1123), Expect = 9.3e-119
Identity = 220/241 (91.29%), Postives = 225/241 (93.36%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP+SE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN S N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNSQ 180
              +  N+RKVP HPQDLHSWFQSEQPNV LEFNPNPT  NNSASNPYYDENY IMVNSQ
Sbjct: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNPYYDENYSIMVNSQ 180

Query: 181 SNGNYEHHMTKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRH 240
           SN NYEHHM KMEESGSYGSFEETSGYSMYTLD LHSNVQQWSFNESADDLQSVAFGNRH
Sbjct: 181 SNENYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRH 238

Query: 241 W 242
           W
Sbjct: 241 W 238

[Close]

BLAST of Lsi05G010040 vs. NCBI nr
Match: XP_023511754.1 (LOB domain-containing protein 29-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.1 bits (1115), Expect = 7.8e-118
Identity = 219/241 (90.87%), Postives = 224/241 (92.95%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP+SE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN S N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 GVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNSQ 180
              +  N+RKVP HPQDLHSWFQSEQPNV LEFNPNPT  NNSASNPYYDENY IMVNSQ
Sbjct: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNPYYDENYSIMVNSQ 180

Query: 181 SNGNYEHHMTKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAFGNRH 240
           SN NYEHHM KMEESGSY SFEETSGYSMYTLD LHSNVQQWSFNESADDLQSVAFGNRH
Sbjct: 181 SNENYEHHMAKMEESGSYESFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRH 238

Query: 241 W 242
           W
Sbjct: 241 W 238

[Close]

BLAST of Lsi05G010040 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-50
Identity = 109/199 (54.77%), Postives = 138/199 (69.35%), Query Frame = 0


Query: 2   TGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISER 61
           + SGSPCGACKFLRRKC +GCVFAPYFCHEQGA+HFAAIHKVFGASN SKLL+ LPIS+R
Sbjct: 6   SSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDR 65

Query: 62  CEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGGG 121
           CEAA+TISYEAQARLQDPIYGCVSHIFALQQQVV+LQA+L  LK+QAA+S++ A S    
Sbjct: 66  CEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS---P 125

Query: 122 VNEKINN-----RKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSAS-NPYYDENYCI 181
            +E  N+      K P H    + +   +Q ++  +   + T  +  A+ + Y++E    
Sbjct: 126 TSENPNSYYGDTTKAPYHHDHQNIYHHHDQTHLVYQTGSSGTVQHGDATESSYHNETSSG 185

Query: 182 MVNSQSNGNYEHHMTKMEE 195
           M       + E H+    +
Sbjct: 186 MGEFSIYSDLEQHLNTFNQ 201

[Close]

BLAST of Lsi05G010040 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 188.7 bits (478), Expect = 5.4e-48
Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           MTGSGSPCGACKFLRR+CV+GCVFAPYFCHEQGA+HFAAIH+VFGASN SKLL+ LP+ +
Sbjct: 1   MTGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMED 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASS 118
           R EAA TI YEAQAR QDPIYGCVSHIF+LQQQVV+LQ QL  LK+QA +S+M   S
Sbjct: 61  RREAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMMAIDS 117

[Close]

BLAST of Lsi05G010040 vs. TAIR 10
Match: AT2G31310.1 (LOB domain-containing protein 14 )

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-43
Identity = 97/186 (52.15%), Postives = 127/186 (68.28%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 60
           M G GSPCG CKFLRRKCV GCVFAPYFC+E+G+++FAAIHKVFGASN SKL++ LP  +
Sbjct: 1   MGGLGSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGG 120
           RC+A  TISYEA +RL DPIYGCVS IF+LQQQVVSLQAQ+  L+E+A+        +  
Sbjct: 61  RCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASRRF---PQDDP 120

Query: 121 GVNEKINNRKVPSH-PQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNS 180
           G N K   + +    PQDLH+WF   Q  +  +F+P      ++  +  ++E+ C   +S
Sbjct: 121 GCNMKQQEKVLAQQMPQDLHNWF--HQGILDSDFDPMSGTTRDNERSMDHNESPC---SS 178

Query: 181 QSNGNY 186
             + NY
Sbjct: 181 NESLNY 178

[Close]

BLAST of Lsi05G010040 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 166.4 bits (420), Expect = 2.8e-41
Identity = 83/125 (66.40%), Postives = 96/125 (76.80%), Query Frame = 0


Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISERC 62
           G+GSPCGACKFLRRKC   C+FAPYF  EQGA  FAAIHKVFGASNVSKLL  +PI +RC
Sbjct: 11  GTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRC 70

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNGGGV 122
           EA VTI+YEAQARL DP+YGCVSHIFALQQQV  LQ+Q+  +K Q A    +A+ +    
Sbjct: 71  EAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHS 130

Query: 123 NEKIN 128
           +E  N
Sbjct: 131 SESTN 135

[Close]

BLAST of Lsi05G010040 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-39
Identity = 75/107 (70.09%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISERC 62
           G G PCGACKFLRRKCV GC+FAPYF  EQG+ +FAA+HKVFGASNVSKLL  +P+  R 
Sbjct: 33  GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVHRRS 92

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAA 110
           +A VTI YEAQAR++DPIYGCV+HIFALQQQVV+LQA+++ L+   A
Sbjct: 93  DAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

The following BLAST results are available for this feature:

BLAST of Lsi05G010040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5UG13	5.6e-50	80.65	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q9M2J7	2.1e-49	54.77	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]
Q9SLB6	7.5e-47	77.78	LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 S...	[more]
Q9SJW5	1.9e-42	52.15	LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 S...	[more]
Q9SLB7	4.0e-40	66.40	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]

BLAST of Lsi05G010040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHF9	3.2e-125	95.06	LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489890 PE=3 SV...	[more]
A0A0A0L817	2.7e-124	93.83	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G396920 PE=3 SV...	[more]
A0A6J1HQS1	4.5e-119	91.29	LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC11146694...	[more]
A0A6J1HFS0	4.5e-119	91.29	LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A5A7T7B7	1.9e-117	90.95	LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Lsi05G010040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888992.1	2.3e-125	94.69	LOB domain-containing protein 14-like [Benincasa hispida]	[more]
XP_008447445.1	6.6e-125	95.06	PREDICTED: LOB domain-containing protein 29 [Cucumis melo]	[more]
XP_004152038.1	5.6e-124	93.83	LOB domain-containing protein 29 [Cucumis sativus] >KGN57933.1 hypothetical prot...	[more]
XP_022963632.1	9.3e-119	91.29	LOB domain-containing protein 29-like [Cucurbita moschata] >XP_022967412.1 LOB d...	[more]
XP_023511754.1	7.8e-118	90.87	LOB domain-containing protein 29-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi05G010040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58190.1	1.5e-50	54.77	lateral organ boundaries-domain 29	[more]
AT2G42440.1	5.4e-48	77.78	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G31310.1	1.4e-43	52.15	LOB domain-containing protein 14	[more]
AT2G42430.1	2.8e-41	66.40	lateral organ boundaries-domain 16	[more]
AT2G45420.1	1.6e-39	70.09	LOB domain-containing protein 18	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..114
None	No IPR available	PANTHER	PTHR31529:SF41	LOB DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..238
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 1..238
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 7..105 e-value: 1.0E-35 score: 122.3
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 6..108 score: 22.139231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G010040.1	Lsi05G010040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus