Lsi05G010010 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G010010
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Poly [ADP-ribose] polymerase
Location	chr05: 17472668 .. 17483005 (-)
RNA-Seq Expression	Lsi05G010010
Synteny	Lsi05G010010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGATCGAGAAGACTTGGCATATTCTACTTTCCATGGCTTCTGGGGGTTCGCCATTTTCACCTGAACTCAACACTTTGTATAAAAATGCGCCGAAGAACAGTCGCCCACAATCACAAACATACATATACAGTTTAAGGAATGTTGGGTGTGAGCGAAATTGAGAATCTTTGATTTTAAAAATGTAATCTTGGTCAGAGAAGAGGAGGGAGAGTGAGTGACACCGAACGAAAGAGACAGATAGTCGGAAAAGCTTCTCCTCAACGCTTCATTTTGGGCCATTTTGACTTTGGGCTCTCAAACTTCTCCGGCAAGGAGACAGAATAGCCCAATAAAAAATACAACTTTTAAAAATAGTTTTAAAAAAAAAAAATACATTTATCGTCAGTTTAAAATATCATAAACTTTCAAAAACTTTAAAAATACACTTAAAGCTTTAAAAAGTTTAAAAATACCTTTAAAATTAGTATATGATCAGAATCGTTATAGTCTACTCAATGTTTGAGTCTCCTATTAGAATACTTAAGTTCTCAATTATTATAACTCACACTTATCTACAGTAAAACTGTTTGAAAATCTTCATTGTCTATTATTATTTTTAGATTTTTATCTAGTTCTATGGAAGAAGAAAATAACTTCGGATACAAACAAAAATTTTACTAAAAAAACAACTCGTTTTAAAAAATTATGTAACTAATTAAAAGTTTAAGGCCAAAATTCTATAGATTTGCAAGCTTTGATGCTTACTTTTAATAAATGTATAAGTTTGAGTGTCCTAATTTTCTAGTTGAGTTATGCACAAATTAAGAAATAAGTTTGATTAATTTATGTGGTTGACAAAATATAATATTTAAGGTAGCATTACTTATACAATAAAAAAACAAATAGTAGAAAAAAACCTAAACTCAAACTAAAATATCCTACACCTCAAACACATACTATTATTGCTCATACTAAAATAGTTTGCATCCTGAACACATACTATTATAAGCTAGACTAAAATAGTCTATACCAACCATAGAGTATTATAATCCATAGATTATTATGAGTCATGTTTTATAATAACCCCATACTATAATAATTAAATTAGCATTCCGAATAACCCATAAAAGTTTAGCAATATTTTTGAAACATAGTATTAATGGACAATAAAGGTGCTTTTTAAATTGTCTTTGAAGGCTATAATATTTTTGAAACATAGTAGAAAGTTGAGGGCTATTCCAATAATTTAGCCTATATCTTAATGAGACCATGACAATAAAGTGAGGGAAAAAACTCTAAACCTCTAAATTACATAATATTATATAATTTAGAATACATCACATAATACATATTTTATTTTTTTAAAAAAAAATTGAATTTGAGTCTATAAGATGACATATTGTTTAATATAATTATGTATTTTAAATTTTAAAAAGCAAAATATGGATATATTGAAAACATAGAAATGTTGTTTTCAAAGTTTGCATGGTTTGGATCATATAATGTGAAAAACAGTTTTCAAAAATAGAATCCAAATTGTCTGTCGAACACATATTTGTTGAATGAAGAATGTAAAAACATAAAACAAAATTTAGATTGCCAACCAAACAAGCCTTAAATGTCCCAAGTTTCTTCGGTTTCAAAACCTTGACATTTGTGAAAATTCGTGGAGATTTGGACATAAATGAAAATATGGTCTATTATGAGACCTATTTATGTAGTTACACAATCCATTTAGATTTAGATATCAAGAGCCTCAAGTCAAAATAGATTTTTATTTATTTTTTATTTATACAATGGATAACCTAATTTGCTAATCCGAATTTTGAAAATAATGAATACACTAACATTTTGCTTATGTCACATATCATTTAGATCGCGTTTGTTATTTTATCTGTCCTTCTCGCTTGTACTTCTTTCTCATCCTCGCACTTGTGCTACCTTCTTCCCCTCTCTCTCTTGCTCGCGCTTGTGGCTGTCGTCCAACCATTCATTACTAGCTTCAACGAATCTTTACACTCTATTTTCTAGTCACCTTCCAATCGTTTATTATGAGTGTGAGGATCTGAGGGAGGAATACATAGATTTACAATCTGAGGGAGGAATACATGTATTTACTTTGCTTATAGTATTGGTAAAGGAGAAAGAGAGAGATGAGCGCAAGGATATGAAAAAAGCATGAGTGAGAGATAAAAAAAATAGCCAACACAATCTAAGTGGCATGCGACATAATCAAAAGCTATTCATTTTTTTCTCCCAAAATTTAAGTTATTTACATTGCAAATTAAGTGTCTGTTTGATTGGCAATTTGGATTATGTTATTAAAAACTGTTTTTGGATTATGTGATTCAAACCGTGCAAATTCGAAAAACAACATTTTTATGTTTTTTTATTATATCCAGATTTTGAATTTTATTTTAAAATGCATAATTGTATTAAATATAGATATTTAGAAATACAACATGTCACGTTATCAACTCAATTCATTTTTAAAAAAAATTAAAATATGTATTATATAATGTATTAAAAATTAGGCTAAATTTTAAAAAACATCCCTGAACTTTGCATTTTGTGTCAAACATACACTTGAACTTTTAAAAGTTTAAAAAATACCTTTAAACTTTCAAAAAGAGCTCAAAATTACCCTTGTCATTAGTTTTGGATGAAAACCGAAAAAGTTTTGTTTAAAAATACCCCTAAACTTTCAAAGTTTCAAAAATACCCTTAAACTTTTAAAAAAAATACCTTCACTGTTAGTACATGAACAAAAACCGTTAATATCTCATTGGAACAATAACTCTAAAATTAAAAAAAAAAAAAAGTTTTAAAATGCTCCTACCGTTAATGTTGAAGATTTGTCTTTATATTTTCTTTTCTAAGGTTGCTTGTGATGGTCTTTGTAGTTGTCACAAATGAAGCCTCGTCATCTGTCTCATATGATATTATTTCTTGTAGTATATTTTCTTTCCTTATTTGGAGAATTATTGTAGATTTATTTTGTCTCATATTTTTACTTGTTTGAGGTGCTGCTTATTATTTTTGAATGGGGATTATGTTTCCTTTCTTAACCTCGGTTCGTAAAAGGAGAATTATGGTGTCTTTTTAGGGCTATCGCATTTGATTATTGTTTGAGAGTATTCTTGTTCTTGGTGGCTGAACTGAGCAACATTGTGTGGTTGATTTTTATTCACTATATTCCGCTATATGATTGCATTGACTAAAAAGTGAAAGTCTTTGATGATCATTCCTGTCTTAGGGGGATCCTAAAGCACTTTGTTTAGAAGGGATTCTCGGTCTTAGGGAGAGCCCAAGACTTCATTCTTTTGAGAAGAAGTTATCCATCTTAGAGTGTACCTAAGATTCATCAGTGAAGGGAGTTCACTAAGTAAAAGGGAAGATAATAAAGTTGGAAAGGAGGCTCACACACTATCGGAAGCCAAAGTGTTCAACACTAATATTAACATGTTTAGGAGGAGCCTAAGCTCTTTTGAGAGGGAGTCTCACGTCTAGGGGAGCCTAGGTGATCAGTGAGTTGGGTTCTACGTAAGTCGCTGTAGTAGTCGTTGTATTGTAAATAAGTACTACGTTGTAATTGCTCGATTCTTTAATATTAGTGAATTATCTTTCCTAAGCACATTGCCCCTAGACATAGGTGAAATTCACCGAATTAGGTTATCAACTTCTGTGTGCCTTTACTTGTTTTCTTGCTTTTAGTTTTTTTTTCGTTATAATACTTGATTGTGCTTTTCATTTAACATTTCTGTTTCTAGTGACGAGTCATTTTATAGCTTTTCAGTTAATATATTGATCAATTTGTTTGAAGTTTTCTCGAGTTAAAAAAAACCAATTTTAAAACAAATTATATAGATATCCTCACTTTTTTTAATATAGATACTCTCACTTTCCTCTTGTTTTTCCAATTATTATACCAAATTTTTCAGCAACCAAAATTTTAAGTTAGAACAAAAAATCTCACAAAATTCTAAAATCTAAACCTCCCTTTAAAACACACCAAAACGATAAATAGTCAAATAAAAAATGTATTTGACTAATAACATACACTTAACTACTAATATACAACTTTGTTAAAACATTTAAGTCCTAAAATCTCTTGGTACTTCTATTATTCTCTTTCTTCTTATTATAGTCCATATACATTAATTGAAGTATGCAATTTTTTTTTAGATATACAAATGTCAAACATTTAACAAAATGGGTCGTAGGAGAGTATTGAAGAGGAGAGAGGAGAAAATAGAGGAAAAATAGAGAACTAAGACAGTATTAATAGTTTTTGTTAAGGGTTTTTTTGACAAAAAAAAAACTAACGGTTTCCATGGTAAGTGTATTTTTGAACTTATTTTGGAAGTTTAGGGTATTTTTTAAACTTTTGGAAGTTCAAACGGATTTTTGATGCAAAGTACAAAATGTAGGGGTATTTTGTATAATTTAGCTTATAAATTAATAATAATAATATAAATTTTTTTTAACATAAAACATGTTCATAAACAATAATAATTATTTATGTTGGGGGAATTATATATAAGAATTGAATGTAATAGCAAACTGATTACACCTCAACTAGATACACTACACACTCAAATATTGTGGAGATTGAAAAGGCAGTCGAGGCACGCTTCTGATAAGCACTGTCTTGAGGATTATTATTTGCTCTACATGGGTTGAAAAATAAATTACAACGATCGTCTCAGCATGATACAATGACTAATTCGTTAGAACAACAACCTTGAACTACTTGGACACTTGTTCACAACTTAACTCAAGATGAAAAGAAAGAAAGAAAGAAGAGAACTCTTCGATTTGAAATGAGAAACTACAAATGAATAAACAAGTTGCTGTTTATAAGTTAGGACTGTGTAACTCTCCAAAATATAAAATAAAGTCAAATAAATACAAGAATTTAACAATTTGTCAAATTTAACTCAATTGAGTTGTTTTTGTTTTTTTTTTTACCAAAATCAAACATGCCTCATTTAAATTGAAGAAAATAAAAATTTAACTTTAATACATGTTAAATTTGTACATGAAATATCATATAATTTGATAGTTACAATTGAGTTTGAAGTTTCTAACCATGAGTTTAATTTACAGAATTAAATTCATTTTTTTTATATTTTGAAATTAAAAAATATTTCATTTTCTTTCAATACCATATAAATATCCAATAATTTATTGCTTACTAAATTTAATCGGTGACTACAAACTAATTTTATGACTCGTATGAATATATATTGTTTTGCTGCCAAATTCAAACATAAAATACTGTTTTCATTGAAACTCTTTATTTTCAAGTTTCTGTTTTTCAGATTCTTTAATGGTTCTAAATTCTAGTAACTCATTCGTTAATGAAAAAAAGTCAATGACCCAAAATGAAGCTTCGTTTGCTCGGCGTCGGTGTCACCACTCGCGTTCCCTCGTCTACTCTGACCAAGATTGCATTTTTAAAATCAATGATTCTCAATTTCGCTCACACCCAACTCATCCCTTAACTATATATATGTTTGTGATTGTGGGCGACTGTTCTTCGGCGTATTTTTATAAGTAAGTGTTGAGTTCAGGTGAAAATGGTGAACCCCAGAAGCCATGGAAGGTGGAATATGCCAAATCTTCTCGATCCTCCTGCAAGACCTGCGAAAATCTCATTCAGAAGGAGAATCTCCGCTTTCGCAAGATGGTTCAGGCCACCCAATTCGACGGCTTAATGCTTGTACTCACCCATTTCCCTCTTTCACCATTTCCCCACTTTTTTTAGTGCCACTTCCCTGTTGGGTTTTTGGGTTTCTTCGTATAACCCTTCTTGTTAGCTCTAGCAGCATGTTTAGGTTTTCGGTAACTCTGCTTTTGGTTTTCATATTCTTCATTTCGTATCAGTTTATTGGTTATTCTCGTTGCGTTACTCTCCTTATCATTTTCTGTTCGTTTGGAGAATATGCATTTGCTTCCACTTGGAATCGGCTCTCACTGACTTTCGCTTCTTCAAAACCTTTTTTAATGGAGACATTTCATTTTCAATTATGTGGATTTTGAAATGGATAAGTGTTAATTTCCGAAGGGGGTTATTTCAATTCCCTAATTATCAGTTCTGGCTGCTAATATTTTTAGTTAACAATGCCTTTTCAGTTCTTTTGGGCTAGTTAGAATTAAGTCTCCTCATATCGTATGCCTTTTAACCTCTCTATTTTAGTGTTTGATTGTTATTTGGTTTCTATCTCACTTAGACGTCCTTCATCGTCCTTGATATATTCTTTGAAATTCATGGTGTGTACCTGTAGTTTGATTATGATGGAACATTCTAATTGTTGATATGCTCTTATTTTTCTGAACCAGATGTGGAATCATGCTGCCTGCATATTGAAGAAAGAAAAACAGATCAAATCGTATGTGTACTAATGATAATTTACCATATGGATTGATGTATAACATCCGAAAAATTTGCTCATTGGTTCGAATTTACCATATGACAAAATTGATGATGTTGAAGGACTTGACTCATTGAGATGAGAAGATCAGTAGAAGATCAGACAATATGTGGAAGACAGCGGAGCTGCAGCTGCAGTGGCTGTTATGCCTGTAGAGTGTGGTATTGAAGTTTCGCAAACTTCACGTGCTTCTTGCAAGCACTGCAAACAGAAGATTCTGAAAGGAGGTAGCTTTTTTATCCATATTCTCTTAACATCGTATTCTTTAAATCTGAATATAGTTAGACATCTTTCAGCTTTTAACCCTTTATGTAGTTCGTCTTTCTTATTTGGATTTTTTTGGATTCAAGTTCACACCTATACCAGAAAGGGTTTAAATGCTGTTTTGAGGATTTATAGGTCTTAGATATTAGAAATAACCGGGAATCTTTTTTTAAGGGCAATGGGGTATGCAGAACATGCTTCTATTAATTTTTTTTTTTTGTATTTTTTTTTTCTCTGTTGTATCATCCATGTCTATGGACTTGTTGAAGAAAAATGTTGATCTAGTTGTAACACAATTTCGAGGTTCGTTTGTCCACTGCCCAAGATGGTAAAGGGGCCAAAGGCTTGGCTAGGTACCATGCAAACTGCTACATGGAACAATGTCCATCTACCCAAGTTGAGAAGTTGGGAGGTTGGCAAAACCTCCCACCTTCTGACCAGGCTGCTGTTAGTGCCTTGGTGAAGAAGCTTCCATCCACTGAAAAAAATGGTATGGCCTTCATGTAAATCTGCAAAATATAGTGTTTTTTATGTTATAATCTCATTCTTTTGTTAACTCTTTTGCGTATTTGTGTGTGTGGATCATAGAAGAGAAACAGACAACTTCAAAAGCTGGTAAACGTAAAAAAGACACTACTGAAGACCAGGATTCTAAAGTTACCAAGGCTGCAGGAGATGTTTCTGTAAGTAGGTCCATGAAAAGTACTATTGTTTCAGCAGACCCTCAAAGTTCATCTGATTTGGTGGGAAACTGGAGGTACAAAGTAAACGATTGAGGAAGCTAAAAGATGATCTAAAAAAGCATGTGACAACTGTAGAGTTGCGGGAAATGCTTGAATCTAATGATCAAGATTCAACAGGATCATTGTTTGATTTGCGGGATAGCTGGTAGTCTCTTTCCTTCAAGCCTTCCCCCCTTTCTTTTCTTATAATTGATTGGTATCGAGAGACTAGTATTGGACTTACCCTTTTTCCATGCATTACTCTTTTATGATAATTGTGCTTGCATCTTATGATAATTTTCGAACAAATTTTGTTGATAGGTAGTTGATATATCCTTTTTTTTTCTTAGGTATATTTAAATTAGTTGTCGTGGTTTTATTTGCTATACCAAAAGGTTTTTCTTTGTTGCTTTTAATACTGGCACATTTCCTAATTGATGTATATGTCTTGTTTAGTGCTGATGGTATGATGTTTGGAGCACTTGCAAAATGCCCTATCTGTTTTGGTTCGCTACGTTACTCTAGAGACATGTATCGATGTCACACATATCAGTCTGCATGGAGCAAGTGTAGCTACTCTACTCGTGCACCAAAGCGCCTTAAAGGGAAGTGGAAAGTCCTAGAAGAGACTGACAACCAATATCTGCAAGGTTTCTGCAAAAACCAATCTTATATGAAAGTAGCATGAATCATGATTTCACATCTAATGGTCTCTTACAGTGGTTTAAATTACAAATAGGCGCAAAACCTATTCGATTATTGCCTCCGCCATCTACTGGTAGTGCCACTGGCAATCAAGCTTCTAATAGTCAATCACAATCATCAAGGGCTGAAAGCTTGACTGAGCTAAGAGTTTCCTTCTATGGATTAAAAGATTCCATGGTAAGATCTTTCATTCCAACTTTTGTATACTTCAAATTACTTTCATTGTGCAGAGTGTAGTTGATAACATTTTGTTGAATCTTGCAGGGAGAATGGAAAAGAAAAATTGAGGGTGAAGGTGGAGCCGTTCATGCCAAGATAAAGAAAAGTATCCTTTGTACTGTCTTTATCACCTCTTTCGTTAGTCACCATGTAACTCTATGTTAGTCTACTTTGATGACAAAAATTAAGTGCAGATACTAATTGCTTGGTTGTTAGTGGAGACATGGATGAATATAATACAGAAATGAAGAAGGCAAGGTAAAGCATCCCTCTAGTTGTGTTGTTAGTTGTTACTTTCTAAATCAATTGGTTTCTCATTTCTGTCTCTTTTGGTCACTGGATGCAATGGACAGGAGGTGGAAGATACCTATAGTTCAGGAAGAGTATCTCGTAGATTGCTTTAGAAAACAGAAGAAGCTTCCATATGATAGGTGTTGGACCGGTATGGCAACCCTAGAGGGGGTGAATAGGGTTTAATTAAACTTTTTAAGAAATATGCTCAATTTAAACTAATTAAATACTTTTTAAAATAAATTAATAAAAACCCTAAATGATGCCAAATAACAAGATTGATAAAAAGTATGTAACAATAAACTCAATCAATATCAACCAACAAAAACATGCAATTAAAATTAAATGCAAAAATAATTAGGAAAGAGTTAGAGAAGAAGACACCGTAATTTTTATAGTGGTTCGGTCAAACTCGACCTACATCCACTTTCCCAAGCGCCTCTTGGGATTTCGATTAAAAATCTCCTTTTGACTCTTTCCACGGATCAGAGCCGAACCGTTACCTTACTCCTTTTTCGGGTTCAAGAGCAAACCCGATCCTTTCCATGGGTTAGGATCAAACCATTACAATGTTGTTGAAAGCTTTAAATCACTCAATAAAACTCTCTAAAAGAGTGGGTATACAAATTTGAGCTCACACACTTTGATTCTCACAATACAATAGAAAATTCTCTCAAGAATAAGATGAAAAGAACAAAAATTGGAAGCTTGGAGAGAGAGCAACAATGGTGACCTTTTTACTAATTTTGAGAATTGAAAAGTGTGAAAAAGTTGAAACAATTTTGGGAAGATGATTAAAAAGAGAGGAAAGTGGGCTAAAAAATTGAATTTGATTTTGATCCATTGGATTGTGTAAAAAGCAAATTGAGTGGTTGAGATTAAAAGTAAAAAAGTAATTTTCTTTTTAATTTTAAAATCAACTAACCGTTAGACACAAACATATATAATATTAAATTCATTTACTTTAAAAACAACTAGCCGTTAGACACATACATATATATAATATTAAATTCATTTCTTTTTAAAATCATTTTTTTTATTATTTTCAAAATCAATATCTTTTAGTTTTATTAAAATCCACCAATTATAAAATAAAGCCCCTTGTGTCACTTCCTCTATGGCTTCAAGTGACACTCCTTAATTAATCTAATTTGATGATTAATTTTGGCCACGTCACCACCTCGGTATTTTTTCGTTAACTTTATTTCGACGATAACTTCTTCGTTTGAACTCCGATTTTGGTGATTCAAGAGGCATCAAAATCGTTGTTTCGAGCTCTACGCTATGGGCTATTCAAAATAATAAAATTATTAGTAAACAAAATCAGGTTTGTTATCATCAAAACATTAATTAAAATTAATTAATTTGAGATTAAGGGCCAAAAAGCCAACAATAGGTACAAAGTTGAAGTTGCTGGCGAGTCCACCAGCCTGGTCACCGTAGATGTGGAAGGGAGAAGTGCAGTACACAAATCTTCAGGCTTGCAGAATACAACTTTAAACATGTTAGACTTGTCGAACAGGTATGCTTATTTCTCCTTTGCACCCTAAACTGTCTTCCTATGGATCTGTTAACTTTTTTGCCAATTGGTTACAAAGGTAGATAAGAGGAGATTTCAAGATATTATTGGTGATCTTCTGTTGATATAGCCACTCATCAACATCTTTATCACTAAAGGCTCTTTTAACATTTAGACACCAAATTACGAGTCAATGTAAC

mRNA sequence

GAGGATCGAGAAGACTTGGCATATTCTACTTTCCATGGCTTCTGGGGGTTCGCCATTTTCACCTGAACTCAACACTTTGTATAAAAATGCGCCGAAGAACAGTCGCCCACAATCACAAACATACATATACAGTGAAAATGGTGAACCCCAGAAGCCATGGAAGGTGGAATATGCCAAATCTTCTCGATCCTCCTGCAAGACCTGCGAAAATCTCATTCAGAAGGAGAATCTCCGCTTTCGCAAGATGGTTCAGGCCACCCAATTCGACGGCTTAATGCTTATGTGGAATCATGCTGCCTGCATATTGAAGAAAGAAAAACAGATCAAATCGTATAAGATCAGACAATATGTGGAAGACAGCGGAGCTGCAGCTGCAGTGGCTGTTATGCCTGTAGAGTGTGGTATTGAATTAGACATCTTTCAGCTTTTAACCCTTTATGTAGTTCGTCTTTCTTATTTGGATTTTTTTGGATTCAAGTTCACACCTATACCAGAAAGGGTCTTAGATATTAGAAATAACCGGGAATCTTTTTTTAAGGGCAATGGGGTTCGTTTGTCCACTGCCCAAGATGGTAAAGGGGCCAAAGGCTTGGCTAGGTACCATGCAAACTGCTACATGGAACAATGTCCATCTACCCAAGTTGAGAAGTTGGGAGGTTGGCAAAACCTCCCACCTTCTGACCAGGCTGCTGTTAGTGCCTTGGTGAAGAAGCTTCCATCCACTGAAAAAAATGAAGAGAAACAGACAACTTCAAAAGCTGGTAAACGTAAAAAAGACACTACTGAAGACCAGGATTCTAAAGTTACCAAGGCTGCAGGAGATGTTTCTGTAAGTAGGTCCATGAAAAGTACTATTGTTTCAGCAGACCCTCAAAGTTCATCTGATTTGGTGGGAAACTGGAGTAAACGATTGAGGAAGCTAAAAGATGATCTAAAAAAGCATGTGACAACTGTAGAGTTGCGGGAAATGCTTGAATCTAATGATCAAGATTCAACAGGATCATTGTTTGATTTGCGGGATAGCTGTTGTCGTGGTTTTATTTGCTATACCAAAAGTGCTGATGGTATGATGTTTGGAGCACTTGCAAAATGCCCTATCTGTTTTGGTTCGCTACGTTACTCTAGAGACATGTATCGATGTCACACATATCAGTCTGCATGGAGCAAGTGTAGCTACTCTACTCGTGCACCAAAGCGCCTTAAAGGGAAGTGGAAAGTCCTAGAAGAGACTGACAACCAATATCTGCAAGGTTTCTGCAAAAACCAATCTTATATGAAATGGTTTAAATTACAAATAGGCGCAAAACCTATTCGATTATTGCCTCCGCCATCTACTGGTAGTGCCACTGGCAATCAAGCTTCTAATAGTCAATCACAATCATCAAGGGCTGAAAGCTTGACTGAGCTAAGAGTTTCCTTCTATGGATTAAAAGATTCCATGGGAGAATGGAAAAGAAAAATTGAGGGTGAAGGTGGAGCCGTTCATGCCAAGATAAAGAAAAATACTAATTGCTTGGTTGTTAGTGGAGACATGGATGAATATAATACAGAAATGAAGAAGGCAAGCCACTCATCAACATCTTTATCACTAAAGGCTCTTTTAACATTTAGACACCAAATTACGAGTCAATGTAAC

Coding sequence (CDS)

ATGGCTTCTGGGGGTTCGCCATTTTCACCTGAACTCAACACTTTGTATAAAAATGCGCCGAAGAACAGTCGCCCACAATCACAAACATACATATACAGTGAAAATGGTGAACCCCAGAAGCCATGGAAGGTGGAATATGCCAAATCTTCTCGATCCTCCTGCAAGACCTGCGAAAATCTCATTCAGAAGGAGAATCTCCGCTTTCGCAAGATGGTTCAGGCCACCCAATTCGACGGCTTAATGCTTATGTGGAATCATGCTGCCTGCATATTGAAGAAAGAAAAACAGATCAAATCGTATAAGATCAGACAATATGTGGAAGACAGCGGAGCTGCAGCTGCAGTGGCTGTTATGCCTGTAGAGTGTGGTATTGAATTAGACATCTTTCAGCTTTTAACCCTTTATGTAGTTCGTCTTTCTTATTTGGATTTTTTTGGATTCAAGTTCACACCTATACCAGAAAGGGTCTTAGATATTAGAAATAACCGGGAATCTTTTTTTAAGGGCAATGGGGTTCGTTTGTCCACTGCCCAAGATGGTAAAGGGGCCAAAGGCTTGGCTAGGTACCATGCAAACTGCTACATGGAACAATGTCCATCTACCCAAGTTGAGAAGTTGGGAGGTTGGCAAAACCTCCCACCTTCTGACCAGGCTGCTGTTAGTGCCTTGGTGAAGAAGCTTCCATCCACTGAAAAAAATGAAGAGAAACAGACAACTTCAAAAGCTGGTAAACGTAAAAAAGACACTACTGAAGACCAGGATTCTAAAGTTACCAAGGCTGCAGGAGATGTTTCTGTAAGTAGGTCCATGAAAAGTACTATTGTTTCAGCAGACCCTCAAAGTTCATCTGATTTGGTGGGAAACTGGAGTAAACGATTGAGGAAGCTAAAAGATGATCTAAAAAAGCATGTGACAACTGTAGAGTTGCGGGAAATGCTTGAATCTAATGATCAAGATTCAACAGGATCATTGTTTGATTTGCGGGATAGCTGTTGTCGTGGTTTTATTTGCTATACCAAAAGTGCTGATGGTATGATGTTTGGAGCACTTGCAAAATGCCCTATCTGTTTTGGTTCGCTACGTTACTCTAGAGACATGTATCGATGTCACACATATCAGTCTGCATGGAGCAAGTGTAGCTACTCTACTCGTGCACCAAAGCGCCTTAAAGGGAAGTGGAAAGTCCTAGAAGAGACTGACAACCAATATCTGCAAGGTTTCTGCAAAAACCAATCTTATATGAAATGGTTTAAATTACAAATAGGCGCAAAACCTATTCGATTATTGCCTCCGCCATCTACTGGTAGTGCCACTGGCAATCAAGCTTCTAATAGTCAATCACAATCATCAAGGGCTGAAAGCTTGACTGAGCTAAGAGTTTCCTTCTATGGATTAAAAGATTCCATGGGAGAATGGAAAAGAAAAATTGAGGGTGAAGGTGGAGCCGTTCATGCCAAGATAAAGAAAAATACTAATTGCTTGGTTGTTAGTGGAGACATGGATGAATATAATACAGAAATGAAGAAGGCAAGCCACTCATCAACATCTTTATCACTAAAGGCTCTTTTAACATTTAGACACCAAATTACGAGTCAATGTAAC

Protein sequence

MASGGSPFSPELNTLYKNAPKNSRPQSQTYIYSENGEPQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQIKSYKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSYLDFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAAGDVSVSRSMKSTIVSADPQSSSDLVGNWSKRLRKLKDDLKKHVTTVELREMLESNDQDSTGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSKCSYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSATGNQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSGDMDEYNTEMKKASHSSTSLSLKALLTFRHQITSQCN

Homology

[Close]

BLAST of Lsi05G010010 vs. ExPASy Swiss-Prot
Match: Q9ZP54 (Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=PARP1 PE=1 SV=2)

HSP 1 Score: 346.7 bits (888), Expect = 4.8e-94
Identity = 218/499 (43.69%), Postives = 289/499 (57.92%), Query Frame = 0


Query: 38  PQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQI 97
           P KPW+ EYAKSSRSSCKTC+++I KEN R  K+VQ+T FDG+M MWNHA+CILKK KQI
Sbjct: 4   PHKPWRAEYAKSSRSSCKTCKSVINKENFRLGKLVQSTHFDGIMPMWNHASCILKKTKQI 63

Query: 98  KS---------------YKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSYL 157
           KS                KIR+YVE SGA +  +                T    +L Y 
Sbjct: 64  KSVDDVEGIESLRWEDQQKIRKYVE-SGAGSNTST-------STGTSTSSTANNAKLEY- 123

Query: 158 DFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPSTQ 217
              G + +         R   E   KG  VR+ +  +G G KGL  +HA C++E   ST+
Sbjct: 124 ---GIEVSQTSR--AGCRKCSEKILKGE-VRIFSKPEGPGNKGLMWHHAKCFLEMSSSTE 183

Query: 218 VEKLGGWQNLPPSDQAAVSALVKK-LPS--TEKNEEKQTTSKAG-KRKKDTTEDQDSKVT 277
           +E L GW+++P SDQ A+  LVKK LP+  TE  E +QT S+AG KRK D+ +++ SK+ 
Sbjct: 184 LESLSGWRSIPDSDQEALLPLVKKALPAAKTETAEARQTNSRAGTKRKNDSVDNEKSKLA 243

Query: 278 KAAGDVSVSRSMKSTIVSADPQSSSDLVGNWSKRLRKLKDDLKKHVTTVELREMLESNDQ 337
           K++ D+S S +++       P S    +   +K L  LKDDLKK+VT+ ELREMLE N+Q
Sbjct: 244 KSSFDMSTSGALQ-------PCSKEKEMEAQTKELWDLKDDLKKYVTSAELREMLEVNEQ 303

Query: 338 DSTGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSK 397
            + GS  DLRD C          ADGMMFG LA CP+C G L +S  +YRCH Y S WSK
Sbjct: 304 STRGSELDLRDKC----------ADGMMFGPLALCPMCSGHLSFSGGLYRCHGYISEWSK 363

Query: 398 CSYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSAT 457
           CS+ST  P R+KGKWK+ +ET+NQ+L         +KW K Q   KP R+L P  +G  +
Sbjct: 364 CSHSTLDPDRIKGKWKIPDETENQFL---------LKWNKSQKSVKPKRILRPVLSGETS 423

Query: 458 GNQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSG 517
             Q S   + SSR+E L +L+VS  G       WK++IE  G   HA +KK T+CLVV G
Sbjct: 424 QGQGSKDATDSSRSERLADLKVSIAGNTKERQPWKKRIEEAGAEFHANVKKGTSCLVVCG 461

[Close]

BLAST of Lsi05G010010 vs. ExPASy Swiss-Prot
Match: Q7EYV7 (Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PARP1 PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.5e-75
Identity = 198/496 (39.92%), Postives = 258/496 (52.02%), Query Frame = 0


Query: 38  PQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQI 97
           P K WK EYAKS RSSCK+C + I K+ LR  KMVQATQFDGLM MWNHA+CIL K+ QI
Sbjct: 4   PPKAWKAEYAKSGRSSCKSCRSPIGKDQLRLGKMVQATQFDGLMPMWNHASCILSKKNQI 63

Query: 98  KSY---------------KIRQYVEDSGA-AAAVAVMPVECGIELDIFQLLTLYVVRLSY 157
           KS                KIR YV  + A A++ A +  +C IE+               
Sbjct: 64  KSVDDVEGIDTLRWDDQEKIRNYVGSAPATASSAAAISDKCTIEV--------------- 123

Query: 158 LDFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPST 217
                             R   E   KG  VR+S+  +G+G      YHA+C++E  P+ 
Sbjct: 124 ----------AKSARTSCRRCGEKIKKGT-VRVSSKLEGQG-----WYHASCFLEMSPAA 183

Query: 218 QVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAA 277
            VE   GW+ L   D+ AV  LVKK    +     QT+SK  KRK +  +  D K  K  
Sbjct: 184 TVENFSGWEILSHEDKRAVLDLVKK----DAPSSGQTSSKGSKRKNNQNDIHDCKAPKII 243

Query: 278 GDVS--VSRSMKSTIVSADPQ-SSSDL---VGNWSKRLRKLKDDLKKHVTTVELREMLES 337
             +S   +      +VS D   +SSDL   +   S  L KLKD+LKKHV+T ELR MLE+
Sbjct: 244 RSISEGTAEDKGKAVVSHDSNANSSDLQEKLKEQSDTLWKLKDELKKHVSTAELRNMLEA 303

Query: 338 NDQDSTGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSA 397
           N QD++G    L D C          ADGM+FGAL  CP+C   L Y    Y C  Y S 
Sbjct: 304 NGQDTSGPERHLLDRC----------ADGMLFGALGTCPVCSSFLYYHGGQYHCSGYVSE 363

Query: 398 WSKCSYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTG 457
           WSKC+YST  P R K KWK+ +E DN YL          KWFK Q   KP R+LPP S  
Sbjct: 364 WSKCTYSTTEPVRSKKKWKIPDEMDNGYL---------TKWFKSQKAKKPERVLPPMSPE 423

Query: 458 SATGNQASNSQSQSSRAESLTELRVSFYG-LKDSMGEWKRKIEGEGGAVHAKIKKNTNCL 511
            +     S  Q++S  +E L +LRVS  G  KD +  WK+K++  G   +A + K+++CL
Sbjct: 424 KSLCQ--STQQNRSFLSEGLDKLRVSIVGQSKDVVDGWKQKLKDAGANFNATVTKDSSCL 443

[Close]

BLAST of Lsi05G010010 vs. ExPASy Swiss-Prot
Match: Q9ZSV1 (Poly [ADP-ribose] polymerase 1 OS=Zea mays OX=4577 GN=PARP1 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.7e-70
Identity = 182/493 (36.92%), Postives = 249/493 (50.51%), Query Frame = 0


Query: 38  PQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQI 97
           P K WK EYAKS R+SCK+C + I K+ LR  KMVQA+QFDG M MWNHA CI  K+ QI
Sbjct: 4   PPKAWKAEYAKSGRASCKSCRSPIAKDQLRLGKMVQASQFDGFMPMWNHARCIFSKKNQI 63

Query: 98  KSY---------------KIRQYVEDSGA-AAAVAVMPVECGIELDIFQLLTLYVVRLSY 157
           KS                KIR YV  + A  ++ A  P +C IE+               
Sbjct: 64  KSVDDVEGIDALRWDDQEKIRNYVGSASAGTSSTAAPPEKCTIEI--------------- 123

Query: 158 LDFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPST 217
                      P      R   E   KG+ VRLS   + +G KG+  YHANC+ E  PS 
Sbjct: 124 ----------APSARTSCRRCSEKITKGS-VRLSAKLESEGPKGIPWYHANCFFEVSPSA 183

Query: 218 QVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAA 277
            VEK  GW  L   D+  +  LVKK      N E+   SK  K + D    + +++ ++ 
Sbjct: 184 TVEKFSGWDTLSDEDKRTMLDLVKK---DVGNNEQNKGSKRKKSENDIDSYKSARLDEST 243

Query: 278 GDVSVSRSMKSTIVSADPQSSSDL---VGNWSKRLRKLKDDLKKHVTTVELREMLESNDQ 337
            + +V    +         SS+D+   +   S  L KLKD LK HV+  ELR+MLE+N Q
Sbjct: 244 SEGTVRNKGQLVDPRGSNTSSADIQLKLKEQSDTLWKLKDGLKTHVSAAELRDMLEANGQ 303

Query: 338 DSTGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSK 397
           D++G    L D C          ADGM+FGAL  CP+C   + Y    Y+C    S WSK
Sbjct: 304 DTSGPERHLLDRC----------ADGMLFGALGPCPVCANGMYYYNGQYQCSGNVSEWSK 363

Query: 398 CSYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSAT 457
           C+YS   P R+K KW++   T N YL         MKWFK Q   KP R+LPP S    +
Sbjct: 364 CTYSATEPVRVKKKWQIPHGTKNDYL---------MKWFKSQKVKKPERVLPPMSP-EKS 423

Query: 458 GNQASNSQSQSSRAESLTELRVSFYG-LKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVS 511
           G++A+   S  S ++ L +LR S  G  K++  EW  K++  G   +A++ K+ +CL+  
Sbjct: 424 GSKATQRTSLLS-SKGLDKLRFSVVGQSKEAANEWIEKLKLAGANFYARVVKDIDCLIAC 446

[Close]

BLAST of Lsi05G010010 vs. ExPASy Swiss-Prot
Match: P09874 (Poly [ADP-ribose] polymerase 1 OS=Homo sapiens OX=9606 GN=PARP1 PE=1 SV=4)

HSP 1 Score: 107.5 bits (267), Expect = 4.9e-22
Identity = 133/504 (26.39%), Postives = 211/504 (41.87%), Query Frame = 0


Query: 40  KPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQIKS 99
           K ++VEYAKS R+SCK C   I K++LR   MVQ+  FDG +  W H +C  K    I+ 
Sbjct: 7   KLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRH 66

Query: 100 YKI------------RQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSYLDFFGF 159
             +            +Q V+ +  A  V     + GI     + L  +    +       
Sbjct: 67  PDVEVDGFSELRWDDQQKVKKTAEAGGVTGKGQD-GIGSKAEKTLGDFAAEYA------- 126

Query: 160 KFTPIPERVLDIRNNRESFFKGNGVRLS--TAQDGKGAKGLAR--YHANCYMEQ------ 219
                       +   E   KG  VRLS       K   G+    YH  C+++       
Sbjct: 127 -----KSNRSTCKGCMEKIEKGQ-VRLSKKMVDPEKPQLGMIDRWYHPGCFVKNREELGF 186

Query: 220 CPSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTE-----KNEEKQTTSKAGKRKKDTTED 279
            P     +L G+  L   D+    AL K+LP  +     K +E     +  K+K    +D
Sbjct: 187 RPEYSASQLKGFSLLATEDK---EALKKQLPGVKSEGKRKGDEVDGVDEVAKKKSKKEKD 246

Query: 280 QDSKVTKAAGDVSVSRSMKSTIVSADPQSSSDLVGNWSKRLRKLKDDLKKHVTTVELREM 339
           +DSK+ KA                   ++ +DL+ N       +KD+LKK  +T +L+E+
Sbjct: 247 KDSKLEKAL------------------KAQNDLIWN-------IKDELKKVCSTNDLKEL 306

Query: 340 LESNDQDSTGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTY 399
           L  N Q        + D          + ADGM+FGAL  C  C G L +  D Y C   
Sbjct: 307 LIFNKQQVPSGESAILD----------RVADGMVFGALLPCEECSGQLVFKSDAYYCTGD 366

Query: 400 QSAWSKCSYSTRAPKRLKGKWKVLEE-TDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPP 459
            +AW+KC   T+ P R   +W   +E  +  YL+   K +   + F  +  A  +   PP
Sbjct: 367 VTAWTKCMVKTQTPNR--KEWVTPKEFREISYLKKL-KVKKQDRIFPPETSAS-VAATPP 426

Query: 460 PSTGSATGNQASNSQSQSSRAESLTELRVSFYG-LKDSMGEWKRKIEGEGGAVHAKIKKN 515
           PST SA    A NS + + +   L+ +++   G L  +  E K  IE  GG +     K 
Sbjct: 427 PSTASAPA--AVNSSASADK--PLSNMKILTLGKLSRNKDEVKAMIEKLGGKLTGTANKA 450

[Close]

BLAST of Lsi05G010010 vs. ExPASy Swiss-Prot
Match: P18493 (Poly [ADP-ribose] polymerase 1 OS=Bos taurus OX=9913 GN=PARP1 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-19
Identity = 126/499 (25.25%), Postives = 207/499 (41.48%), Query Frame = 0


Query: 40  KPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQI-- 99
           K ++VEYAKS R+SCK C+  I K+++R   MV++  FDG +  W H +C  K    I  
Sbjct: 7   KLYRVEYAKSGRASCKKCKESIPKDSIRMAFMVESPMFDGKIPHWYHLSCFWKVGFSIWH 66

Query: 100 KSYKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSYLDFFGFKFTPIPERVL 159
              ++  + E             E G   D+       V   +      F          
Sbjct: 67  PDVEVEGFSELRWDDQQTIKKMAETGGRTDVSGKGQDGVGSKTEKTLIDFGAGYAKSNRS 126

Query: 160 DIRNNRESFFKGNGVRLS--TAQDGKGAKGLAR--YHANCYMEQ------CPSTQVEKLG 219
             ++  E   KG  VRLS       K   G+    YH  C++++       P      L 
Sbjct: 127 TCKSCMEKIDKGQ-VRLSKKVVYPDKPQLGMVDCWYHPKCFVQKREELGFRPEFSATHLM 186

Query: 220 GWQNLPPSDQAAVSALVKKLPSTE-----KNEEKQTTSKAGKRKKDTTEDQDSKVTKAAG 279
           G+  L   DQ     L K+LP+ +     K +E     +  K+K    +D++ K+ KA  
Sbjct: 187 GFSVLTAEDQ---ETLKKQLPAIKGERKRKGDEVDGIDEVTKKKSKKEKDKEIKLEKAL- 246

Query: 280 DVSVSRSMKSTIVSADPQSSSDLVGNWSKRLRKLKDDLKKHVTTVELREMLESNDQDSTG 339
                            ++ +DL+ N       +KD+LKK  +T +L+E+L  N Q+   
Sbjct: 247 -----------------KAQNDLIWN-------VKDELKKACSTNDLKELLIFNKQEVPS 306

Query: 340 SLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSKCSYS 399
               + D          + ADGM+FGAL  C  C G L +  D Y C    +AW+KC   
Sbjct: 307 GESAILD----------RVADGMVFGALLPCEECSGQLVFKGDAYYCTGDVTAWTKCMVK 366

Query: 400 TRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPST---GSATG 459
           T+ P R   +W   +E          +  SY K  K++   K  R+ PP S+   G+A  
Sbjct: 367 TQTPNR--KEWVTPKE---------FREISYFKKLKIK---KQDRIFPPESSTPVGAAAP 426

Query: 460 NQASNSQS---QSSRAESLTELRVSFYG-LKDSMGEWKRKIEGEGGAVHAKIKKNTNCLV 515
             A+++ +        + L+ +++   G L  +  E K  IE  GG +     K + C+ 
Sbjct: 427 PSAASAPAAVHSGPPDKPLSNMKILTLGKLSQNKDEVKATIEKLGGKLTGTANKASLCIS 452

[Close]

BLAST of Lsi05G010010 vs. ExPASy TrEMBL
Match: A0A6J1HGL0 (Poly [ADP-ribose] polymerase OS=Cucurbita moschata OX=3662 GN=LOC111463901 PE=4 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 8.6e-171
Identity = 346/498 (69.48%), Postives = 366/498 (73.49%), Query Frame = 0


Query: 38  PQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQI 97
           PQKPWKVEYAKSSRSSCKTC++ IQKENLRF KMVQATQFDG M MWNH  CILKK KQI
Sbjct: 4   PQKPWKVEYAKSSRSSCKTCKSPIQKENLRFGKMVQATQFDGFMPMWNHGTCILKKAKQI 63

Query: 98  KS---------------YKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSYL 157
           KS                KIRQYVEDS AA AVAV PVECGIE+           R S  
Sbjct: 64  KSIDDVEGLDSLRWEDQQKIRQYVEDSAAATAVAVTPVECGIEVS-------QTSRAS-- 123

Query: 158 DFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPSTQ 217
                            +  ++   KG  VRLSTA DGKGAKGLA YHANCYMEQ PSTQ
Sbjct: 124 ----------------CKRCKQKIMKGE-VRLSTALDGKGAKGLAWYHANCYMEQSPSTQ 183

Query: 218 VEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAAG 277
           V KL GWQNLP SDQAAVSALVKK PS +KNEEKQ TSKAGKRKKDT  DQDSKVTKA G
Sbjct: 184 VSKLAGWQNLPSSDQAAVSALVKKPPSADKNEEKQ-TSKAGKRKKDTMTDQDSKVTKAVG 243

Query: 278 DVSVSRSMKSTIVSADPQSSSDLVGN---WSKRLRKLKDDLKKHVTTVELREMLESNDQD 337
           DVS SRSMK+ IV+ADPQ+SSDLV      SK L KLKDDLKK+VTTVE+REMLESNDQD
Sbjct: 244 DVSESRSMKNAIVTADPQNSSDLVSKLEAQSKELWKLKDDLKKNVTTVEMREMLESNDQD 303

Query: 338 STGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSKC 397
           STGS  DLRD C          ADGMMFGALAKCPIC GS+RYS  MYRCH YQSAWSKC
Sbjct: 304 STGSELDLRDRC----------ADGMMFGALAKCPICSGSIRYSGGMYRCHGYQSAWSKC 363

Query: 398 SYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSATG 457
           SYST  P+RLKGKWKV EET NQYL          KWFK Q  AKPIRLLPPPS+ SA G
Sbjct: 364 SYSTHEPERLKGKWKVPEETSNQYLS---------KWFKSQKVAKPIRLLPPPSSNSANG 423

Query: 458 NQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSGD 517
           NQ SNSQSQSS+AESL ELRVSF GLKDS+GEWKRKIEGEGGAVH KIKK+TNCLVVSGD
Sbjct: 424 NQGSNSQSQSSKAESLAELRVSFCGLKDSVGEWKRKIEGEGGAVHPKIKKDTNCLVVSGD 455

[Close]

BLAST of Lsi05G010010 vs. ExPASy TrEMBL
Match: A0A6J1HUD8 (Poly [ADP-ribose] polymerase OS=Cucurbita maxima OX=3661 GN=LOC111466943 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 5.6e-170
Identity = 347/511 (67.91%), Postives = 367/511 (71.82%), Query Frame = 0


Query: 38  PQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQI 97
           PQKPWKVEYAKSSRSSCKTC++ IQKENLRF KMVQATQFDG M MWNH  CILKK KQI
Sbjct: 4   PQKPWKVEYAKSSRSSCKTCKSPIQKENLRFGKMVQATQFDGFMPMWNHGTCILKKAKQI 63

Query: 98  KS---------------YKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSYL 157
           KS                KIRQYVEDS AA AVAV PVECGIE+           R S  
Sbjct: 64  KSIDDVEGLDSLRWEDQQKIRQYVEDSAAATAVAVTPVECGIEVS-------QTSRAS-- 123

Query: 158 DFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPSTQ 217
                            +  ++   KG  VRLSTA DGKGAKGLA YHANCYMEQ PS Q
Sbjct: 124 ----------------CKRCKQKIMKGE-VRLSTALDGKGAKGLAWYHANCYMEQSPSAQ 183

Query: 218 VEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAAG 277
           V KL GWQNLP SDQAAVSALVKK PS +KNE KQ TSKAGKRKKDT  DQDSKVTKA G
Sbjct: 184 VSKLAGWQNLPSSDQAAVSALVKKPPSADKNEAKQATSKAGKRKKDTMTDQDSKVTKAVG 243

Query: 278 DVSVSRSMKSTIVSADPQSSSDLVGN---WSKRLRKLKDDLKKHVTTVELREMLESNDQD 337
           DVS SRSMK+ IV+ADPQ+SSDLV      SK L KLKDDLKK+VTTVE+REMLESNDQD
Sbjct: 244 DVSESRSMKNAIVTADPQNSSDLVSKLEAQSKELWKLKDDLKKNVTTVEMREMLESNDQD 303

Query: 338 STGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSKC 397
           STGS  DLRD C          ADGMMFGALAKCPIC GS+RYS  MYRCH YQSAWSKC
Sbjct: 304 STGSELDLRDRC----------ADGMMFGALAKCPICSGSIRYSGGMYRCHGYQSAWSKC 363

Query: 398 SYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSATG 457
           SYSTR P+RL GKWKV EET NQYL          KWFK Q GAKPIRLLPPPS  SA G
Sbjct: 364 SYSTREPERLTGKWKVPEETSNQYLS---------KWFKSQKGAKPIRLLPPPSFSSANG 423

Query: 458 NQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSGD 517
           NQ  NSQSQSS+AESL ELRVSF GL DS+GEWKRKIEGEGGAVH KIKK+TNCLVVSGD
Sbjct: 424 NQGPNSQSQSSKAESLAELRVSFCGLTDSVGEWKRKIEGEGGAVHPKIKKDTNCLVVSGD 469

Query: 518 MDEYNTEMKKASHSSTSLSLKALLT--FRHQ 529
           MDEYN EMKKA  +   +  +  L   FR Q
Sbjct: 484 MDEYNAEMKKARRTKIPIVREEYLVDCFRKQ 469

[Close]

BLAST of Lsi05G010010 vs. ExPASy TrEMBL
Match: A0A5A7SHK7 (Poly [ADP-ribose] polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00050 PE=4 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 1.2e-169
Identity = 339/492 (68.90%), Postives = 363/492 (73.78%), Query Frame = 0


Query: 37  EPQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQ 96
           EPQKPWKVEYAKSSRSSCKTC++ IQKENLRF KMVQATQFDG M MWNHAACILKK KQ
Sbjct: 3   EPQKPWKVEYAKSSRSSCKTCKSPIQKENLRFGKMVQATQFDGFMPMWNHAACILKKAKQ 62

Query: 97  IKS---------------YKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSY 156
           IKS                KIRQYV+DS AAAAV V PVE GIE+           R S 
Sbjct: 63  IKSIDDVEGLDSLRWEDQQKIRQYVQDSAAAAAVVVTPVEYGIEVS-------QTARAS- 122

Query: 157 LDFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPST 216
                             ++ ++   KG  VRLSTA DGKG KGLA YHANCYMEQCPST
Sbjct: 123 -----------------CKHCKQKIMKGEVVRLSTALDGKGTKGLAWYHANCYMEQCPST 182

Query: 217 QVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAA 276
           QVEKL GWQ+LPPSDQAAVS LVKK  S  KNEEKQTTSKA KRKKDT EDQDSKVTKA 
Sbjct: 183 QVEKLAGWQSLPPSDQAAVSILVKKPSSAVKNEEKQTTSKASKRKKDTAEDQDSKVTKAT 242

Query: 277 GDVSVSRSMKSTIVSADPQSSSDLVGN---WSKRLRKLKDDLKKHVTTVELREMLESNDQ 336
           GDVS SRS+K+  VS D Q+SSDLV      SK L KLKDDLKKHVTT ELREMLESNDQ
Sbjct: 243 GDVSESRSVKNAFVSVDSQNSSDLVSKLEAQSKGLWKLKDDLKKHVTTAELREMLESNDQ 302

Query: 337 DSTGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSK 396
           DS+GS  DLRD C          ADGMMFGALAKCPICFGSL YSR MYRCH YQSAW+K
Sbjct: 303 DSSGSELDLRDRC----------ADGMMFGALAKCPICFGSLHYSRGMYRCHGYQSAWTK 362

Query: 397 CSYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSAT 456
           CSYST  P+RL+GKWKV EET NQYL          KWFK Q GAKPIRLLPPP++ +A 
Sbjct: 363 CSYSTCEPQRLRGKWKVPEETGNQYLS---------KWFKSQKGAKPIRLLPPPTSSTAN 422

Query: 457 GNQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSG 511
           GNQ S+SQSQSS +E+L ELRVSFYGLKDSMGEWKRKIE EGGAVHAKIKK+TNCLVV G
Sbjct: 423 GNQTSSSQSQSSSSENLAELRVSFYGLKDSMGEWKRKIEVEGGAVHAKIKKDTNCLVVGG 450

[Close]

BLAST of Lsi05G010010 vs. ExPASy TrEMBL
Match: A0A0A0L7J5 (Poly [ADP-ribose] polymerase OS=Cucumis sativus OX=3659 GN=Csa_3G398930 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 1.6e-169
Identity = 341/492 (69.31%), Postives = 362/492 (73.58%), Query Frame = 0


Query: 37  EPQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQ 96
           EPQKPWKVEYAKSSRSSCKTC++ IQKENLRF KMVQATQFDG M MWNHAACILKK KQ
Sbjct: 3   EPQKPWKVEYAKSSRSSCKTCKSPIQKENLRFGKMVQATQFDGFMPMWNHAACILKKAKQ 62

Query: 97  IKS---------------YKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSY 156
           IKS                KIRQYVEDS AAAAV V P+E GIE+           R S 
Sbjct: 63  IKSIDDVEGLDSLRWEDQLKIRQYVEDSVAAAAVVVTPIEYGIEVS-------QTSRAS- 122

Query: 157 LDFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPST 216
                             ++ ++   KG  VRLST  DGKG KGLA YHANCYMEQCPS 
Sbjct: 123 -----------------CKHCKQKIMKGE-VRLSTVLDGKGTKGLAWYHANCYMEQCPSA 182

Query: 217 QVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAA 276
           QVEKL GWQNLPPSDQAA+S LVKK  S  KNEEKQTTSKAGKRKKDT EDQDSKVTKA 
Sbjct: 183 QVEKLAGWQNLPPSDQAAISTLVKKPSSAVKNEEKQTTSKAGKRKKDTAEDQDSKVTKAT 242

Query: 277 GDVSVSRSMKSTIVSADPQSSSDLVGN---WSKRLRKLKDDLKKHVTTVELREMLESNDQ 336
           GDVS SRSMK+ IVSAD Q+S+DLV      SK L KLKDDLKKHVTT ELREMLESNDQ
Sbjct: 243 GDVSESRSMKNAIVSADSQNSADLVSKLEAQSKGLWKLKDDLKKHVTTSELREMLESNDQ 302

Query: 337 DSTGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSK 396
           DSTGS  DLRD C          ADGMMFGALAKCPICFGSL YSR MYRCH YQSAWSK
Sbjct: 303 DSTGSELDLRDRC----------ADGMMFGALAKCPICFGSLCYSRGMYRCHGYQSAWSK 362

Query: 397 CSYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSAT 456
           CSYST  P+RL+GKWKV EET N YL          KWFK Q GAKPIRLLPPP++ +  
Sbjct: 363 CSYSTCEPERLRGKWKVPEETGNLYLS---------KWFKSQKGAKPIRLLPPPTSSTTN 422

Query: 457 GNQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSG 511
            NQ SN QSQSS +E+L ELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKK+TNCLVVSG
Sbjct: 423 SNQTSNGQSQSSNSENLAELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKDTNCLVVSG 449

[Close]

BLAST of Lsi05G010010 vs. ExPASy TrEMBL
Match: A0A1S3CFL2 (Poly [ADP-ribose] polymerase OS=Cucumis melo OX=3656 GN=LOC103500369 PE=4 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 1.4e-168
Identity = 339/492 (68.90%), Postives = 363/492 (73.78%), Query Frame = 0


Query: 37  EPQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQ 96
           EPQKPWKVEYAKSSRSSCKTC++ IQKENLRF KMVQATQFDG M MWNHAACILKK KQ
Sbjct: 3   EPQKPWKVEYAKSSRSSCKTCKSPIQKENLRFGKMVQATQFDGFMPMWNHAACILKKAKQ 62

Query: 97  IKS---------------YKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSY 156
           IKS                KIRQYV+DS AAAAV V PVE GIE+           R S 
Sbjct: 63  IKSIDDVEGLDSLRWEDQQKIRQYVQDSAAAAAVVVTPVEYGIEVS-------QTARAS- 122

Query: 157 LDFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPST 216
                             ++ ++   KG  VRLSTA DGKG KGLA YHANCYMEQCPST
Sbjct: 123 -----------------CKHCKQKIMKGE-VRLSTALDGKGTKGLAWYHANCYMEQCPST 182

Query: 217 QVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAA 276
           QVEKL GWQ+LPPSDQAAVS LVKK  S  KNEEKQTTSKA KRKKDT EDQDSKVTKA 
Sbjct: 183 QVEKLAGWQSLPPSDQAAVSILVKKPSSAVKNEEKQTTSKASKRKKDTAEDQDSKVTKAT 242

Query: 277 GDVSVSRSMKSTIVSADPQSSSDLVGN---WSKRLRKLKDDLKKHVTTVELREMLESNDQ 336
           GDVS SRS+K+  VS D Q+SSDLV      SK L KLKDDLKKHVTT ELREMLESNDQ
Sbjct: 243 GDVSESRSVKNAFVSVDSQNSSDLVSKLEAQSKGLWKLKDDLKKHVTTAELREMLESNDQ 302

Query: 337 DSTGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSK 396
           DS+GS  DLRD C          ADGMMFGALAKCPICFGSL YSR MYRCH YQSAW+K
Sbjct: 303 DSSGSELDLRDRC----------ADGMMFGALAKCPICFGSLHYSRGMYRCHGYQSAWTK 362

Query: 397 CSYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSAT 456
           CSYST  P+RL+GKWKV EET NQYL          KWFK Q GAKPIRLLPPP++ +A 
Sbjct: 363 CSYSTCEPQRLRGKWKVPEETGNQYLS---------KWFKSQKGAKPIRLLPPPTSSTAN 422

Query: 457 GNQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSG 511
           GNQ S+SQSQSS +E+L ELRVSFYGLKDSMGEWKRKIE EGGAVHAKIKK+TNCLVV G
Sbjct: 423 GNQTSSSQSQSSSSENLAELRVSFYGLKDSMGEWKRKIEVEGGAVHAKIKKDTNCLVVGG 449

[Close]

BLAST of Lsi05G010010 vs. NCBI nr
Match: XP_038888831.1 (poly [ADP-ribose] polymerase 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 628.6 bits (1620), Expect = 4.8e-176
Identity = 357/491 (72.71%), Postives = 372/491 (75.76%), Query Frame = 0


Query: 38  PQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQI 97
           PQKPWKVEYAKSSRSSCKTC++ IQKENLRF KMVQATQFDG M MWNHAACILKK KQI
Sbjct: 4   PQKPWKVEYAKSSRSSCKTCKSPIQKENLRFGKMVQATQFDGFMPMWNHAACILKKAKQI 63

Query: 98  KS---------------YKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSYL 157
           KS                KIR+YVEDS AAAAVAV PVE GIE+           R S  
Sbjct: 64  KSIDDVEGLDSLRWEDQQKIRKYVEDSVAAAAVAVTPVESGIEVS-------QTSRAS-- 123

Query: 158 DFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPSTQ 217
                            ++ ++   KG  VRLSTA DGKGAKGLA YHANCYMEQ PSTQ
Sbjct: 124 ----------------CKHCKQKIMKGE-VRLSTALDGKGAKGLAWYHANCYMEQSPSTQ 183

Query: 218 VEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAAG 277
           VEKL GWQNLPPSDQAAVSALVKK  S  KNEEKQTTSKAGKRKKDT EDQDSKVTKA G
Sbjct: 184 VEKLAGWQNLPPSDQAAVSALVKKPSSAVKNEEKQTTSKAGKRKKDTVEDQDSKVTKAVG 243

Query: 278 DVSVSRSMKSTIVSADPQSSSDLVGN---WSKRLRKLKDDLKKHVTTVELREMLESNDQD 337
           DVS SRSMK+ IVSADPQ+SSDLV      SK L KLKDDLKKHVTT ELREMLESNDQD
Sbjct: 244 DVSESRSMKNAIVSADPQNSSDLVSKLEAQSKGLWKLKDDLKKHVTTAELREMLESNDQD 303

Query: 338 STGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSKC 397
           STGS  DLRD C          ADGMMFGALAKCPIC GSLRYS  MYRCH YQSAWSKC
Sbjct: 304 STGSELDLRDRC----------ADGMMFGALAKCPICAGSLRYSGGMYRCHGYQSAWSKC 363

Query: 398 SYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSATG 457
           SYST  P+RLKGKWKV EET NQYL          KWFK Q GAKPIRLLPPPS+ SA G
Sbjct: 364 SYSTCEPERLKGKWKVPEETGNQYLS---------KWFKSQKGAKPIRLLPPPSSSSANG 423

Query: 458 NQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSGD 511
           NQASNSQSQSS+AESL ELRVSF GLKDSMGEWKRKIEGEGGAVHAKIKK+TNCLVVSGD
Sbjct: 424 NQASNSQSQSSKAESLAELRVSFCGLKDSMGEWKRKIEGEGGAVHAKIKKDTNCLVVSGD 449

[Close]

BLAST of Lsi05G010010 vs. NCBI nr
Match: XP_038887408.1 (poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 622.9 bits (1605), Expect = 2.6e-174
Identity = 352/491 (71.69%), Postives = 369/491 (75.15%), Query Frame = 0


Query: 38  PQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQI 97
           PQKPWKVEYAKSSRSSCKTCEN IQKENLRF KMVQATQFDG M MWNHAACILKKEKQI
Sbjct: 4   PQKPWKVEYAKSSRSSCKTCENPIQKENLRFGKMVQATQFDGFMPMWNHAACILKKEKQI 63

Query: 98  KS---------------YKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSYL 157
           KS                KIRQYVEDS   AAVAV PVECGIE+                
Sbjct: 64  KSIDDVEGLDLLRWEDQQKIRQYVEDS--VAAVAVTPVECGIEVS--------------- 123

Query: 158 DFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPSTQ 217
                          + ++ ++   KG  VRLS+A D KGAKGLARYHANCY+EQCPST 
Sbjct: 124 ----------QTSRANCKHCKQKIMKGE-VRLSSAVDSKGAKGLARYHANCYIEQCPSTH 183

Query: 218 VEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAAG 277
           VEKL GWQNLPPSD AAVSALVKK PS EKN EKQTTSKAGKRKK T EDQ+SKVT+A G
Sbjct: 184 VEKLAGWQNLPPSDPAAVSALVKKPPSAEKN-EKQTTSKAGKRKKGTAEDQNSKVTRAVG 243

Query: 278 DVSVSRSMKSTIVSADPQSSSDLVGN---WSKRLRKLKDDLKKHVTTVELREMLESNDQD 337
           DVSVSRSMKS IVSADPQ+SSDLV      SK LRKLKDDL KHVT VELREMLESNDQD
Sbjct: 244 DVSVSRSMKSAIVSADPQNSSDLVSKLEAQSKGLRKLKDDLIKHVTAVELREMLESNDQD 303

Query: 338 STGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSKC 397
           STGS  DLRD C          ADGMMFGALAKCPIC GSLRYS  MY CH YQSAWSKC
Sbjct: 304 STGSELDLRDRC----------ADGMMFGALAKCPICSGSLRYSGGMYLCHRYQSAWSKC 363

Query: 398 SYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSATG 457
           SY TR P+RLKGKWKV EET NQYL          KWFK Q+GAKPIRLLP PSTGSA G
Sbjct: 364 SYFTREPERLKGKWKVPEETGNQYLS---------KWFKFQVGAKPIRLLPLPSTGSANG 423

Query: 458 NQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSGD 511
           NQASNSQSQSSRAES  ELRVSF GLKDSMG+WKRKIEGEGGAVHAKIKK+TNCLVVSGD
Sbjct: 424 NQASNSQSQSSRAESFAELRVSFSGLKDSMGDWKRKIEGEGGAVHAKIKKDTNCLVVSGD 446

[Close]

BLAST of Lsi05G010010 vs. NCBI nr
Match: XP_038887411.1 (poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida] >XP_038887412.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida])

HSP 1 Score: 622.9 bits (1605), Expect = 2.6e-174
Identity = 352/491 (71.69%), Postives = 369/491 (75.15%), Query Frame = 0


Query: 38  PQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQI 97
           PQKPWKVEYAKSSRSSCKTCEN IQKENLRF KMVQATQFDG M MWNHAACILKKEKQI
Sbjct: 4   PQKPWKVEYAKSSRSSCKTCENPIQKENLRFGKMVQATQFDGFMPMWNHAACILKKEKQI 63

Query: 98  KS---------------YKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSYL 157
           KS                KIRQYVEDS   AAVAV PVECGIE+                
Sbjct: 64  KSIDDVEGLDLLRWEDQQKIRQYVEDS--VAAVAVTPVECGIEVS--------------- 123

Query: 158 DFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPSTQ 217
                          + ++ ++   KG  VRLS+A D KGAKGLARYHANCY+EQCPST 
Sbjct: 124 ----------QTSRANCKHCKQKIMKGE-VRLSSAVDSKGAKGLARYHANCYIEQCPSTH 183

Query: 218 VEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAAG 277
           VEKL GWQNLPPSD AAVSALVKK PS EKN EKQTTSKAGKRKK T EDQ+SKVT+A G
Sbjct: 184 VEKLAGWQNLPPSDPAAVSALVKKPPSAEKN-EKQTTSKAGKRKKGTAEDQNSKVTRAVG 243

Query: 278 DVSVSRSMKSTIVSADPQSSSDLVGN---WSKRLRKLKDDLKKHVTTVELREMLESNDQD 337
           DVSVSRSMKS IVSADPQ+SSDLV      SK LRKLKDDL KHVT VELREMLESNDQD
Sbjct: 244 DVSVSRSMKSAIVSADPQNSSDLVSKLEAQSKGLRKLKDDLIKHVTAVELREMLESNDQD 303

Query: 338 STGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSKC 397
           STGS  DLRD C          ADGMMFGALAKCPIC GSLRYS  MY CH YQSAWSKC
Sbjct: 304 STGSELDLRDRC----------ADGMMFGALAKCPICSGSLRYSGGMYLCHRYQSAWSKC 363

Query: 398 SYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSATG 457
           SY TR P+RLKGKWKV EET NQYL          KWFK Q+GAKPIRLLP PSTGSA G
Sbjct: 364 SYFTREPERLKGKWKVPEETGNQYLS---------KWFKFQVGAKPIRLLPLPSTGSANG 423

Query: 458 NQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSGD 511
           NQASNSQSQSSRAES  ELRVSF GLKDSMG+WKRKIEGEGGAVHAKIKK+TNCLVVSGD
Sbjct: 424 NQASNSQSQSSRAESFAELRVSFSGLKDSMGDWKRKIEGEGGAVHAKIKKDTNCLVVSGD 446

[Close]

BLAST of Lsi05G010010 vs. NCBI nr
Match: XP_038887414.1 (poly [ADP-ribose] polymerase 1-like isoform X6 [Benincasa hispida])

HSP 1 Score: 622.9 bits (1605), Expect = 2.6e-174
Identity = 352/491 (71.69%), Postives = 369/491 (75.15%), Query Frame = 0


Query: 38  PQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQI 97
           PQKPWKVEYAKSSRSSCKTCEN IQKENLRF KMVQATQFDG M MWNHAACILKKEKQI
Sbjct: 4   PQKPWKVEYAKSSRSSCKTCENPIQKENLRFGKMVQATQFDGFMPMWNHAACILKKEKQI 63

Query: 98  KS---------------YKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSYL 157
           KS                KIRQYVEDS   AAVAV PVECGIE+                
Sbjct: 64  KSIDDVEGLDLLRWEDQQKIRQYVEDS--VAAVAVTPVECGIEVS--------------- 123

Query: 158 DFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPSTQ 217
                          + ++ ++   KG  VRLS+A D KGAKGLARYHANCY+EQCPST 
Sbjct: 124 ----------QTSRANCKHCKQKIMKGE-VRLSSAVDSKGAKGLARYHANCYIEQCPSTH 183

Query: 218 VEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAAG 277
           VEKL GWQNLPPSD AAVSALVKK PS EKN EKQTTSKAGKRKK T EDQ+SKVT+A G
Sbjct: 184 VEKLAGWQNLPPSDPAAVSALVKKPPSAEKN-EKQTTSKAGKRKKGTAEDQNSKVTRAVG 243

Query: 278 DVSVSRSMKSTIVSADPQSSSDLVGN---WSKRLRKLKDDLKKHVTTVELREMLESNDQD 337
           DVSVSRSMKS IVSADPQ+SSDLV      SK LRKLKDDL KHVT VELREMLESNDQD
Sbjct: 244 DVSVSRSMKSAIVSADPQNSSDLVSKLEAQSKGLRKLKDDLIKHVTAVELREMLESNDQD 303

Query: 338 STGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSKC 397
           STGS  DLRD C          ADGMMFGALAKCPIC GSLRYS  MY CH YQSAWSKC
Sbjct: 304 STGSELDLRDRC----------ADGMMFGALAKCPICSGSLRYSGGMYLCHRYQSAWSKC 363

Query: 398 SYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSATG 457
           SY TR P+RLKGKWKV EET NQYL          KWFK Q+GAKPIRLLP PSTGSA G
Sbjct: 364 SYFTREPERLKGKWKVPEETGNQYLS---------KWFKFQVGAKPIRLLPLPSTGSANG 423

Query: 458 NQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSGD 511
           NQASNSQSQSSRAES  ELRVSF GLKDSMG+WKRKIEGEGGAVHAKIKK+TNCLVVSGD
Sbjct: 424 NQASNSQSQSSRAESFAELRVSFSGLKDSMGDWKRKIEGEGGAVHAKIKKDTNCLVVSGD 446

[Close]

BLAST of Lsi05G010010 vs. NCBI nr
Match: XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 622.9 bits (1605), Expect = 2.6e-174
Identity = 352/491 (71.69%), Postives = 369/491 (75.15%), Query Frame = 0


Query: 38  PQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQI 97
           PQKPWKVEYAKSSRSSCKTCEN IQKENLRF KMVQATQFDG M MWNHAACILKKEKQI
Sbjct: 4   PQKPWKVEYAKSSRSSCKTCENPIQKENLRFGKMVQATQFDGFMPMWNHAACILKKEKQI 63

Query: 98  KS---------------YKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSYL 157
           KS                KIRQYVEDS   AAVAV PVECGIE+                
Sbjct: 64  KSIDDVEGLDLLRWEDQQKIRQYVEDS--VAAVAVTPVECGIEVS--------------- 123

Query: 158 DFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPSTQ 217
                          + ++ ++   KG  VRLS+A D KGAKGLARYHANCY+EQCPST 
Sbjct: 124 ----------QTSRANCKHCKQKIMKGE-VRLSSAVDSKGAKGLARYHANCYIEQCPSTH 183

Query: 218 VEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAAG 277
           VEKL GWQNLPPSD AAVSALVKK PS EKN EKQTTSKAGKRKK T EDQ+SKVT+A G
Sbjct: 184 VEKLAGWQNLPPSDPAAVSALVKKPPSAEKN-EKQTTSKAGKRKKGTAEDQNSKVTRAVG 243

Query: 278 DVSVSRSMKSTIVSADPQSSSDLVGN---WSKRLRKLKDDLKKHVTTVELREMLESNDQD 337
           DVSVSRSMKS IVSADPQ+SSDLV      SK LRKLKDDL KHVT VELREMLESNDQD
Sbjct: 244 DVSVSRSMKSAIVSADPQNSSDLVSKLEAQSKGLRKLKDDLIKHVTAVELREMLESNDQD 303

Query: 338 STGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSKC 397
           STGS  DLRD C          ADGMMFGALAKCPIC GSLRYS  MY CH YQSAWSKC
Sbjct: 304 STGSELDLRDRC----------ADGMMFGALAKCPICSGSLRYSGGMYLCHRYQSAWSKC 363

Query: 398 SYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSATG 457
           SY TR P+RLKGKWKV EET NQYL          KWFK Q+GAKPIRLLP PSTGSA G
Sbjct: 364 SYFTREPERLKGKWKVPEETGNQYLS---------KWFKFQVGAKPIRLLPLPSTGSANG 423

Query: 458 NQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSGD 511
           NQASNSQSQSSRAES  ELRVSF GLKDSMG+WKRKIEGEGGAVHAKIKK+TNCLVVSGD
Sbjct: 424 NQASNSQSQSSRAESFAELRVSFSGLKDSMGDWKRKIEGEGGAVHAKIKKDTNCLVVSGD 446

[Close]

BLAST of Lsi05G010010 vs. TAIR 10
Match: AT2G31320.1 (poly(ADP-ribose) polymerase 2 )

HSP 1 Score: 346.7 bits (888), Expect = 3.4e-95
Identity = 218/499 (43.69%), Postives = 289/499 (57.92%), Query Frame = 0


Query: 38  PQKPWKVEYAKSSRSSCKTCENLIQKENLRFRKMVQATQFDGLMLMWNHAACILKKEKQI 97
           P KPW+ EYAKSSRSSCKTC+++I KEN R  K+VQ+T FDG+M MWNHA+CILKK KQI
Sbjct: 4   PHKPWRAEYAKSSRSSCKTCKSVINKENFRLGKLVQSTHFDGIMPMWNHASCILKKTKQI 63

Query: 98  KS---------------YKIRQYVEDSGAAAAVAVMPVECGIELDIFQLLTLYVVRLSYL 157
           KS                KIR+YVE SGA +  +                T    +L Y 
Sbjct: 64  KSVDDVEGIESLRWEDQQKIRKYVE-SGAGSNTST-------STGTSTSSTANNAKLEY- 123

Query: 158 DFFGFKFTPIPERVLDIRNNRESFFKGNGVRLSTAQDGKGAKGLARYHANCYMEQCPSTQ 217
              G + +         R   E   KG  VR+ +  +G G KGL  +HA C++E   ST+
Sbjct: 124 ---GIEVSQTSR--AGCRKCSEKILKGE-VRIFSKPEGPGNKGLMWHHAKCFLEMSSSTE 183

Query: 218 VEKLGGWQNLPPSDQAAVSALVKK-LPS--TEKNEEKQTTSKAG-KRKKDTTEDQDSKVT 277
           +E L GW+++P SDQ A+  LVKK LP+  TE  E +QT S+AG KRK D+ +++ SK+ 
Sbjct: 184 LESLSGWRSIPDSDQEALLPLVKKALPAAKTETAEARQTNSRAGTKRKNDSVDNEKSKLA 243

Query: 278 KAAGDVSVSRSMKSTIVSADPQSSSDLVGNWSKRLRKLKDDLKKHVTTVELREMLESNDQ 337
           K++ D+S S +++       P S    +   +K L  LKDDLKK+VT+ ELREMLE N+Q
Sbjct: 244 KSSFDMSTSGALQ-------PCSKEKEMEAQTKELWDLKDDLKKYVTSAELREMLEVNEQ 303

Query: 338 DSTGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRDMYRCHTYQSAWSK 397
            + GS  DLRD C          ADGMMFG LA CP+C G L +S  +YRCH Y S WSK
Sbjct: 304 STRGSELDLRDKC----------ADGMMFGPLALCPMCSGHLSFSGGLYRCHGYISEWSK 363

Query: 398 CSYSTRAPKRLKGKWKVLEETDNQYLQGFCKNQSYMKWFKLQIGAKPIRLLPPPSTGSAT 457
           CS+ST  P R+KGKWK+ +ET+NQ+L         +KW K Q   KP R+L P  +G  +
Sbjct: 364 CSHSTLDPDRIKGKWKIPDETENQFL---------LKWNKSQKSVKPKRILRPVLSGETS 423

Query: 458 GNQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKNTNCLVVSG 517
             Q S   + SSR+E L +L+VS  G       WK++IE  G   HA +KK T+CLVV G
Sbjct: 424 QGQGSKDATDSSRSERLADLKVSIAGNTKERQPWKKRIEEAGAEFHANVKKGTSCLVVCG 461

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BLAST of Lsi05G010010 vs. TAIR 10
Match: AT5G22470.1 (NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases )

HSP 1 Score: 46.2 bits (108), Expect = 9.5e-05
Identity = 39/153 (25.49%), Postives = 68/153 (44.44%), Query Frame = 0


Query: 259 KAAGDVSVS-RSMKSTIVSADPQSSSDLVGNWSKRLRKLKDDLKKHVTTVELREMLESND 318
           KA G +  S +S K      D   S +  G+ +    +    ++++++  +++E+LE N 
Sbjct: 25  KAEGKLPESEQSQKKAKPENDDGRSVNGAGDAASEYNEFCKAVEENLSIDQIKEVLEING 84

Query: 319 QDSTGSLFDLRDSCCRGFICYTKSADGMMFGALAKCPICFGSLRYSRD-MYRCHTYQSAW 378
           QD +     L   C           D + +GALAKCP+C G+L    +  + C    S W
Sbjct: 85  QDCSAPEETLLAQC----------QDLLFYGALAKCPLCGGTLICDNEKRFVCGGEISEW 144

Query: 379 SKCSYSTRAPKRLKGKWKVLEETDNQYLQGFCK 410
             C +ST+ P R +   K+ +   N  +    K
Sbjct: 145 CSCVFSTKDPPRKEEPVKIPDSVMNSAISDLIK 167

The following BLAST results are available for this feature:

BLAST of Lsi05G010010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZP54	4.8e-94	43.69	Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=PARP1 PE=1 SV=...	[more]
Q7EYV7	6.5e-75	39.92	Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PARP1...	[more]
Q9ZSV1	3.7e-70	36.92	Poly [ADP-ribose] polymerase 1 OS=Zea mays OX=4577 GN=PARP1 PE=2 SV=1	[more]
P09874	4.9e-22	26.39	Poly [ADP-ribose] polymerase 1 OS=Homo sapiens OX=9606 GN=PARP1 PE=1 SV=4	[more]
P18493	1.3e-19	25.25	Poly [ADP-ribose] polymerase 1 OS=Bos taurus OX=9913 GN=PARP1 PE=2 SV=2	[more]

BLAST of Lsi05G010010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGL0	8.6e-171	69.48	Poly [ADP-ribose] polymerase OS=Cucurbita moschata OX=3662 GN=LOC111463901 PE=4 ...	[more]
A0A6J1HUD8	5.6e-170	67.91	Poly [ADP-ribose] polymerase OS=Cucurbita maxima OX=3661 GN=LOC111466943 PE=4 SV...	[more]
A0A5A7SHK7	1.2e-169	68.90	Poly [ADP-ribose] polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0L7J5	1.6e-169	69.31	Poly [ADP-ribose] polymerase OS=Cucumis sativus OX=3659 GN=Csa_3G398930 PE=4 SV=...	[more]
A0A1S3CFL2	1.4e-168	68.90	Poly [ADP-ribose] polymerase OS=Cucumis melo OX=3656 GN=LOC103500369 PE=4 SV=1	[more]

BLAST of Lsi05G010010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888831.1	4.8e-176	72.71	poly [ADP-ribose] polymerase 1 isoform X1 [Benincasa hispida]	[more]
XP_038887408.1	2.6e-174	71.69	poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]	[more]
XP_038887411.1	2.6e-174	71.69	poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida] >XP_038887412...	[more]
XP_038887414.1	2.6e-174	71.69	poly [ADP-ribose] polymerase 1-like isoform X6 [Benincasa hispida]	[more]
XP_038887409.1	2.6e-174	71.69	poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]	[more]

BLAST of Lsi05G010010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31320.1	3.4e-95	43.69	poly(ADP-ribose) polymerase 2	[more]
AT5G22470.1	9.5e-05	25.49	NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012982	PADR1 domain	SMART	SM01335	PADR1_2	coord: 337..390 e-value: 4.4E-20 score: 82.7
IPR012982	PADR1 domain	PFAM	PF08063	PADR1	coord: 340..388 e-value: 1.0E-16 score: 60.4
IPR001510	Zinc finger, PARP-type	SMART	SM01336	zf_PARP_3	coord: 45..107 e-value: 1.1E-14 score: 64.8
IPR001510	Zinc finger, PARP-type	PFAM	PF00645	zf-PARP	coord: 45..100 e-value: 1.0E-11 score: 45.4
IPR001510	Zinc finger, PARP-type	PROSITE	PS50064	PARP_ZN_FINGER_2	coord: 42..96 score: 19.57213
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 445..517 e-value: 1.2E-7 score: 33.5
None	No IPR available	GENE3D	1.10.20.130		coord: 269..348 e-value: 1.5E-9 score: 40.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 430..453
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 433..453
None	No IPR available	PANTHER	PTHR10459	DNA LIGASE	coord: 162..513
None	No IPR available	PANTHER	PTHR10459:SF80	POLY [ADP-RIBOSE] POLYMERASE 1	coord: 162..513
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 39..97
IPR036957	Zinc finger, PARP-type superfamily	GENE3D	3.30.1740.10		coord: 33..111 e-value: 3.7E-19 score: 71.1 coord: 163..247 e-value: 3.3E-5 score: 26.1
IPR038650	PADR1 domain superfamily	GENE3D	2.20.25.630		coord: 349..417 e-value: 1.2E-15 score: 59.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G010010.1	Lsi05G010010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0070212	protein poly-ADP-ribosylation
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003950	NAD+ ADP-ribosyltransferase activity
molecular_function	GO:1990404	protein ADP-ribosylase activity
molecular_function	GO:0008270	zinc ion binding