Lsi05G009940 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATCCAATTTTCTTTCCTTTTTGCCATTTTGCTTCTTCTTATCAACACTCATAAGCTTGAAGGTGGCAGAATAATGAAAGAAGAGAACCAAAAATGGTCAACGGTGATGCTTCTCCAGTCATTGGAGAGGGCACCGGTTCCTCCCTCTGCAAGAAATGGTGGCACCAATATTCCAGTGCCGGTCCGGCCTAGGGCTTTCGCTGGAAAATCCAGTTCGGCACCATTGCCGGTACAACCCTATCAAAATCATGTTTAG ATGAAGATCCAATTTTCTTTCCTTTTTGCCATTTTGCTTCTTCTTATCAACACTCATAAGCTTGAAGGTGGCAGAATAATGAAAGAAGAGAACCAAAAATGGTCAACGGTGATGCTTCTCCAGTCATTGGAGAGGGCACCGGTTCCTCCCTCTGCAAGAAATGGTGGCACCAATATTCCAGTGCCGGTCCGGCCTAGGGCTTTCGCTGGAAAATCCAGTTCGGCACCATTGCCGGTACAACCCTATCAAAATCATGTTTAG ATGAAGATCCAATTTTCTTTCCTTTTTGCCATTTTGCTTCTTCTTATCAACACTCATAAGCTTGAAGGTGGCAGAATAATGAAAGAAGAGAACCAAAAATGGTCAACGGTGATGCTTCTCCAGTCATTGGAGAGGGCACCGGTTCCTCCCTCTGCAAGAAATGGTGGCACCAATATTCCAGTGCCGGTCCGGCCTAGGGCTTTCGCTGGAAAATCCAGTTCGGCACCATTGCCGGTACAACCCTATCAAAATCATGTTTAG MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWSTVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSAPLPVQPYQNHV Homology
BLAST of Lsi05G009940 vs. ExPASy TrEMBL
Match: A0A0A0LCY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16 Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of Lsi05G009940 vs. ExPASy TrEMBL
Match: A0A5D3B777 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold63958G00010 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.3e-15 Identity = 46/76 (60.53%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of Lsi05G009940 vs. NCBI nr
Match: KAG6571503.1 (hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 102.4 bits (254), Expect = 1.9e-18 Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of Lsi05G009940 vs. NCBI nr
Match: KAG6571504.1 (hypothetical protein SDJN03_28232, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100.1 bits (248), Expect = 9.6e-18 Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 0
BLAST of Lsi05G009940 vs. NCBI nr
Match: KAG6571505.1 (hypothetical protein SDJN03_28233, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 98.6 bits (244), Expect = 2.8e-17 Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of Lsi05G009940 vs. NCBI nr
Match: KAG6571501.1 (hypothetical protein SDJN03_28229, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16 Identity = 49/86 (56.98%), Postives = 62/86 (72.09%), Query Frame = 0
BLAST of Lsi05G009940 vs. NCBI nr
Match: KGN57926.1 (hypothetical protein Csa_011112 [Cucumis sativus]) HSP 1 Score: 95.5 bits (236), Expect = 2.4e-16 Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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