Lsi05G009930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G009930
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranscription factor bHLH3
Locationchr05: 17347717 .. 17351969 (+)
RNA-Seq ExpressionLsi05G009930
SyntenyLsi05G009930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCATAACATAGTGAATTAGGTACCCAAGCATGGAAAGCTAATCAAAGTGGTGTGGTATATGCTCCATTGTCAATACATATGCTTTAAAACATCAAAATTAATTTTGAATTTACAAAATCTAAGAACTTGTTTGGTAGAGAATTTGAGTTACATTTTATCTTTTTTATATTCACTGAGTTCAGTAAATATGTGTTTGACGGCAGACAATCTAAATTTTGTTTCTGAAAACTGTTTTTCAGATTCTGTGATCCAAACAGTGCAAATAATGAAAAGAACATTTTTTTTTAATGTTTTCGTTGTACCTGAATTTTTTAATTTTAAAATTTAAAATGCAGAATTATATTAAATAAAGATAAATAAAATATTTAGAAATACAGTATGTCATGTTATAAACTTAATTTATTTTTGTAAAAAATAAGATATGTATTATAGATTACAAAATAATAATTATATACATTTTTTAATATAAATCATATCCATAAATAAATTAATAATAGTGTATTGTTAACTAAATATTAATGGGTAACTACGGACTCGTTTGGACTAGGAAAAAAAATGTTTTTAAAAAAAATCATTTTTATTTAAACTCTTTCAACAAAAATTGTTTAAAATATAATTTGAAAGTGTTTTGAGAGTGAATTTGAGCGGTTACCAAACACTTCAATTTTTTCTAAAATGACTTTTTAAAAAAAAAATTAGACATTTGAAAAGTTAAACTAAACACACCCTACAACTAGTTTTTTTATGATTTATGACTATAATATCAATAACATTTTAAACAATTGTTTAAATTAGAATCTAATTTTCTGAATCTACTACCAAACACACATTTGAAAACATAAAATACAACTCTGTTTTCATTGAATCTTATGCTTTCAAATCCTTGTTTTCAGATTTTCTACGAAACGATATTTTACCAATTAAGCCCTAAATTCTTCTATAATGTTTGTTGAACTAAAAAAAAATCTTCTGCTTTAGTTGACGAAATCTAAGTTCTTATCTAATTATATGATATTGCTAATTTCTTTAAATTAGAATGTTTCTTGTAATATCTACCTTCTTATATATTTTGTTTCTTTCCAAATGTATGTTTTTCACCACATACGCTCTCGTCTAAGTAAAATTTTCCTTTTTTTAAAAAAAAAAAAAAAATTGAGAATAGCTAAATCTTTATTTAAATAACACTATTATTTTAAGTGCATATTAGACCTTTTTTCTATCATATTAACATGATTAGTAGGAAATATTTGAAAACTTTTAATCAAAGATGGATGGAAGAAGAAAAAGAGATGAACACTCCCCTGATATCATTTGTCATAATTCAAAAAAGTATATATTACATAAATTTGTAGTTTCTCTAATTTGTTGCCTCCTCTCAACTTTTGGTAGTTAAAATCTGTAACTAATTTATTTTCCCTTTTCAATTTATTAATCTTGAACTTCTTGTATTTGTTGAGGTGAGATTTAAGTTACTAGCTATCATGATTTAAACTAAATGTATAAAAGTAAGTAAAACATGAAAAATTAAAATGTATAAACTAAAAGTAATTTAAATATAAAAACCAAATGCGTATAAATAAAAAGAAAATTACTATAAATAGAAAAAAAATATCAAACTATTTACAAATATAGAAAATTTTCACTGTCTATCACTAATAGATTACGAGGACAACAATAGAAGTCTATCACGGTCTATCAAATTTTTCTATATTTTGAAATAGTTTGATTCATTTTTCTATATTTAGAAACAACTCTAAATAAAATAACAAACTTAAAAACAAGAAGAAAAATAAATTAAAAAACTTACCTCACAAACTAGGAGAAGAAGTTGAAAAAGAAATTTAAAAAGTGAAGAATTATTGAACTTAAAGCTTTATAAAAAAATAAACAAAAATAAATCTAAAAGTAATTTAAAAATGAAGTTAAATAATCACTCCTGACTTTCTTCTTAATTTCTCGAACGATAAACATTTATTATTGGGCTAGCTAGAGTTTTTTTTAGTACAACAATTGCGGGAATGGGAGATCGAACCTCTCCCACTTTTAAGATGGACGATCATGCCAATTATCGCTGATTTAAGTTCACTTTGGCACATAAAGAGTATAAAGTTAAGGGGAGCTAGAGTTGAGGGAACACATTTACTATTGAGCTAGCTAGAGTTATTGTTATTAAGTTAGTCTTCTTTATATATAGTATTTAAAGAGCATAAAGTTGAGAGGAGCTCGAATCCCCCGAGCCCATACTATATCTGCCACTATATATATAATAAAAATCTTTATTTGTTGGTTACCAATTATGAGAGTGTGTATGTTACGTACCAACATGTTTGAAATATATTTATTTCATGGTATACCAACATGAAAATCTTATAAAACGTACTTAAACACATCATGTGGCTACACGTTCCACAAAACATAAATATATAATAATACAGGCCCTCTTTTCAAAATATTTATCATTTTTAATTACTTTTAAGTTCTTTATTTAAAATGTTTAAGAATCATTCCATGCATCTTAATTTGTAAAATTCTCAATAGCTTATTAATTTATTTTTTATTAATTTTATGTTTGAAATATATTTTAAGTATTAGACTTTGAAAGTTTGAAACTAAATTGACATATAAAGCCAATAGTTGAAAGGGTAAAAATACATTTTTTTTTTTCAAATTACAACTTGAAGAATAAGGTATTGAGAATAATTAGCAAAAATAACAAAACCTTGAAAATCTATATATTTTCAAGGCTTTGACATTGACTATATATTTTTCTTTTTCTTTGCTAATATTCTTGATAGAGACCAATTCAACTCTAAGTTTAACACCTTCACAAACCATTTACACATTTTACTACTTCTATGCTACTCGGTTAAGTAGAACTAATCAATAAATTATAACCTTTTTTATATAATTAATTTTTGTTTTTAAAAACACAAGTCTACTTCAAAGTCCAAACACACCAATTTATTTACTTTACAATGATTTACATCTTAAAATACTTCTCCAAGTTTTAATTCAATGATTAAGGTCCTGTTTATATTCCGGCGACTTAATTTAAAGCTTCACAAAAATATTAAAATGAGCAAAAAAAAAAAAAAAAAAAAAACCTTAGTTACAAGTCTAATTCATTAATTTTCAAAATTTGTGTTTTATAAATATTATTAAACTTTAAAAATGTCTAAAGACTTCTAAGATTTAAATTTTATGTCTAATAGATTCTTGACATATACGATTTCTTTTTTAAAAAATACTTCGTCTATAAGATATAAAATTCAATTTATGTCTAATAAAATTTAAAATTTGTGTTTAGTAGATCCATGAATTCTAAAAAATATCTAATAGTTGATGACTTATTATTACTCTATTAAATAGAAAAAAATCATAAATTTATTAGACAAAACATTGAAAGCGGGGTGGGAGAATCAAACCTTTGTCTTCGAGGTTGATAATACAAACACTATATCAATTAACCTATGTTCATTTTGGCTTAAGTTTACACTTTTTTAAGTTTATGGACCAAATAAATACAAGTTTTAAAATTTAGATACTAAACTTGTAATTTAATCCTGGAATTCTATCGCACTCTATCGCTGATATACAGTAGAATTTTTCTATATTTGTAAATAATTTGACTTATTTTTCTATATTTGAAAACAACTCCTTATTTAATATAAAAACACATTTAAAATGAAAGTACCTCAAATATTACTTTTGAAAAATACCAAAATTTCAAAATATCTTGAACCGTTTTTTATTGTTAACAAAATTTATCCCTTTCTATTCCAACATAGCTTTTTCAACTTTCAAACAAAGGCTTCGTCAAACTCATGTTTCGTAATTCATAGTAAAAACAAAACCCATGAAAAGTCTTAGTCAAATTGATCCTACCAAATCAAATACTTTTATTTTACTTTTATTTTTCTTAGTACTATTAATTTCAAATTAAGCATATATATAAATCACCAAATTAAATACCCCAAATGTATATATTTTCATTATTCTCAAAACAAAAAATTGGGTTAATTTTGAAAGGATTAAAGATGAGATTTTGTAAACAAAAACTCCTCTTTCTAAATCTGATTATGATCATAATTCTCTTAGTTTGTACACAAATTGAAGCGATGAGACCATTGAAAGAAGAACAATGGCCGAAGTTAATTTCTCAGTCACTGCAACGGGCGCCGGTGCCACCGTCGGGGCCGAACCCGTGTACAAATATTCCCGGACAAGGGAATGTTCCTTGTCAATAG

mRNA sequence

ATGGGGAAATATTTGAAAACTTTTAATCAAAGATGGATGGAAGAAGAAAAAGAGATGAACACTCCCCTGATATCATTTGTCATAATTCAAAAAATTTGTACACAAATTGAAGCGATGAGACCATTGAAAGAAGAACAATGGCCGAAGTTAATTTCTCAGTCACTGCAACGGGCGCCGGTGCCACCGTCGGGGCCGAACCCGTGTACAAATATTCCCGGACAAGGGAATGTTCCTTGTCAATAG

Coding sequence (CDS)

ATGGGGAAATATTTGAAAACTTTTAATCAAAGATGGATGGAAGAAGAAAAAGAGATGAACACTCCCCTGATATCATTTGTCATAATTCAAAAAATTTGTACACAAATTGAAGCGATGAGACCATTGAAAGAAGAACAATGGCCGAAGTTAATTTCTCAGTCACTGCAACGGGCGCCGGTGCCACCGTCGGGGCCGAACCCGTGTACAAATATTCCCGGACAAGGGAATGTTCCTTGTCAATAG

Protein sequence

MGKYLKTFNQRWMEEEKEMNTPLISFVIIQKICTQIEAMRPLKEEQWPKLISQSLQRAPVPPSGPNPCTNIPGQGNVPCQ
Homology
[Close]
BLAST of Lsi05G009930 vs. ExPASy TrEMBL
Match: A0A1Q3BFG1 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_10276 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-06
Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 0 

Query: 13 MEEEKEMNTPLISFVIIQKIC-TQIEAMRPLKEEQW--PKLISQSLQRAPVPPSGPNPCT 72
          M   K   T +I  ++   +C  QI AMRPL+ EQW   +++ QSLQR PV PSGPNPCT
Sbjct: 1  MGSHKNRCTSIILPMVTIVLCFQQILAMRPLEGEQWLEKRIVVQSLQRGPVTPSGPNPCT 60

Query: 73 NIPGQGNVPC 80
           IPG+G   C
Sbjct: 61 YIPGRGTGRC 70

[Close]
BLAST of Lsi05G009930 vs. ExPASy TrEMBL
Match: A0A5B6Z7Q1 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_009663 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.9e-06
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 0 

Query: 23  LISFVIIQKIC-TQIEAMRPLKEEQWPK--LISQSLQRAPVPPSGPNPCTNIPGQGNVPC 80
           ++ F+I   +C  Q+ AMRPL+EEQW K  L  QSL R PVP SG NPCT IPG+G   C
Sbjct: 48  ILIFIIFSVLCFRQLSAMRPLEEEQWLKKGLHIQSLPRGPVPSSGSNPCTYIPGRGTGRC 107

[Close]
BLAST of Lsi05G009930 vs. ExPASy TrEMBL
Match: M5VP99 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G228600 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-05
Identity = 33/67 (49.25%), Postives = 41/67 (61.19%), Query Frame = 0 

Query: 21 TPLISFVIIQKI---CTQIEAMRPLKEEQWPK-----LISQSLQRAPVPPSGPNPCTNIP 80
          T L S +++  I   C Q+  MR LK EQW K     L+SQ L R   PPSGPNPCT+IP
Sbjct: 8  TQLFSTLVVLLILFSCLQLGEMRHLKAEQWAKNHGLVLVSQYLARGQAPPSGPNPCTHIP 67

[Close]
BLAST of Lsi05G009930 vs. ExPASy TrEMBL
Match: A0A6J5Y6W4 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51915 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-05
Identity = 33/67 (49.25%), Postives = 41/67 (61.19%), Query Frame = 0 

Query: 21 TPLISFVIIQKI---CTQIEAMRPLKEEQWPK-----LISQSLQRAPVPPSGPNPCTNIP 80
          T L S +++  I   C Q+  MR LK EQW K     L+SQ L R   PPSGPNPCT+IP
Sbjct: 8  TQLFSTLVVLLILFSCLQLGEMRHLKAEQWAKNHGLALVSQYLARGKAPPSGPNPCTHIP 67

[Close]
BLAST of Lsi05G009930 vs. ExPASy TrEMBL
Match: V4KY87 (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10009900mg PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.5e-05
Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 0 

Query: 13 MEEEKEMNTPLISFVIIQKICTQIEAMRPLKEEQWPKLISQSLQRAPVPPSGPNPCTNIP 72
          M+ +  +   L+ F++I    TQ+EA RP + +   + + Q LQR PVPPSGPN CTNIP
Sbjct: 2  MKRQLILGVVLLGFLVIFLDTTQVEATRPFRADGEIRFVFQLLQRGPVPPSGPNGCTNIP 61

Query: 73 G 74
          G
Sbjct: 62 G 62

[Close]
BLAST of Lsi05G009930 vs. NCBI nr
Match: GAV66766.1 (hypothetical protein CFOL_v3_10276 [Cephalotus follicularis])

HSP 1 Score: 61.6 bits (148), Expect = 3.5e-06
Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 0 

Query: 13 MEEEKEMNTPLISFVIIQKIC-TQIEAMRPLKEEQW--PKLISQSLQRAPVPPSGPNPCT 72
          M   K   T +I  ++   +C  QI AMRPL+ EQW   +++ QSLQR PV PSGPNPCT
Sbjct: 1  MGSHKNRCTSIILPMVTIVLCFQQILAMRPLEGEQWLEKRIVVQSLQRGPVTPSGPNPCT 60

Query: 73 NIPGQGNVPC 80
           IPG+G   C
Sbjct: 61 YIPGRGTGRC 70

[Close]
BLAST of Lsi05G009930 vs. NCBI nr
Match: ONH93371.1 (hypothetical protein PRUPE_8G228600 [Prunus persica])

HSP 1 Score: 58.5 bits (140), Expect = 3.0e-05
Identity = 33/67 (49.25%), Postives = 41/67 (61.19%), Query Frame = 0 

Query: 21 TPLISFVIIQKI---CTQIEAMRPLKEEQWPK-----LISQSLQRAPVPPSGPNPCTNIP 80
          T L S +++  I   C Q+  MR LK EQW K     L+SQ L R   PPSGPNPCT+IP
Sbjct: 8  TQLFSTLVVLLILFSCLQLGEMRHLKAEQWAKNHGLVLVSQYLARGQAPPSGPNPCTHIP 67

[Close]
BLAST of Lsi05G009930 vs. NCBI nr
Match: CAB4291562.1 (unnamed protein product [Prunus armeniaca] >CAB4321876.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 58.5 bits (140), Expect = 3.0e-05
Identity = 33/67 (49.25%), Postives = 41/67 (61.19%), Query Frame = 0 

Query: 21 TPLISFVIIQKI---CTQIEAMRPLKEEQWPK-----LISQSLQRAPVPPSGPNPCTNIP 80
          T L S +++  I   C Q+  MR LK EQW K     L+SQ L R   PPSGPNPCT+IP
Sbjct: 8  TQLFSTLVVLLILFSCLQLGEMRHLKAEQWAKNHGLALVSQYLARGKAPPSGPNPCTHIP 67

[Close]
BLAST of Lsi05G009930 vs. NCBI nr
Match: XP_006417956.1 (uncharacterized protein LOC18994259 [Eutrema salsugineum] >ESQ36309.1 hypothetical protein EUTSA_v10009900mg [Eutrema salsugineum])

HSP 1 Score: 57.8 bits (138), Expect = 5.1e-05
Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 0 

Query: 13 MEEEKEMNTPLISFVIIQKICTQIEAMRPLKEEQWPKLISQSLQRAPVPPSGPNPCTNIP 72
          M+ +  +   L+ F++I    TQ+EA RP + +   + + Q LQR PVPPSGPN CTNIP
Sbjct: 2  MKRQLILGVVLLGFLVIFLDTTQVEATRPFRADGEIRFVFQLLQRGPVPPSGPNGCTNIP 61

Query: 73 G 74
          G
Sbjct: 62 G 62

[Close]
BLAST of Lsi05G009930 vs. NCBI nr
Match: CAA3005161.1 (Hypothetical predicted protein [Olea europaea subsp. europaea])

HSP 1 Score: 57.8 bits (138), Expect = 5.1e-05
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 19 MNTPLISFVIIQKICTQIEAMRPLKEEQWPK--LISQSLQRAPVPPSGPNPCTNIPGQG 76
          +N   I  +    I +++ A+RPL+ EQW K  L+ QSL R P+PPSG NPCT IPG+G
Sbjct: 9  INIIFIFSIFFLLISSKVRAIRPLEGEQWQKRTLVIQSLPRGPIPPSGGNPCTYIPGRG 67

[Close]
BLAST of Lsi05G009930 vs. TAIR 10
Match: AT1G06137.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06135.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 1.4e-05
Identity = 27/68 (39.71%), Postives = 40/68 (58.82%), Query Frame = 0 

Query: 13 MEEEKEMNTPLISFVIIQKICTQIEAMRPLKEEQWPKLISQSLQRAPVPPSGPNPCTNIP 72
          M+++  +   L+   +I    TQ+EA RPL+ +   + + Q LQR  V  SGPN CTNIP
Sbjct: 1  MKKQLILGVILLGLFVIFLNTTQVEAARPLQADSEIRFVFQLLQRGQVIGSGPNGCTNIP 60

Query: 73 GQGNVPCQ 81
          G G+  C+
Sbjct: 61 G-GSGTCR 67

[Close]
BLAST of Lsi05G009930 vs. TAIR 10
Match: AT1G06135.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31345.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 2.1e-04
Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 0 

Query: 23 LISFVIIQKICTQIEAMRPL-KEEQWPKLISQSLQRAPVPPSGPNPCTNIP 73
          L++F ++     Q+EAMRP        + + Q+LQR PV  SGPN CTNIP
Sbjct: 11 LVAFFVVFLDVKQVEAMRPFPTAADEIRFVFQALQRGPVSGSGPNGCTNIP 61

[Close]
BLAST of Lsi05G009930 vs. TAIR 10
Match: AT2G31345.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06135.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 40.4 bits (93), Expect = 7.8e-04
Identity = 24/61 (39.34%), Postives = 36/61 (59.02%), Query Frame = 0 

Query: 13 MEEEKEMNTPLISFVIIQKICTQIEAMRPLKEE-QWPKLISQSLQRAPVPPSGPNPCTNI 72
          M+++  +   L+   ++    TQ+EAMRP  +     +L+ Q+LQR PV  SG N CTNI
Sbjct: 2  MKKQLVVVVMLVVMFVVFLDATQVEAMRPFPDPVDEIRLLFQALQRGPVRGSGRNGCTNI 61

The following BLAST results are available for this feature:
BLAST of Lsi05G009930 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi05G009930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1Q3BFG11.7e-0650.00Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_10276 PE=4... [more]
A0A5B6Z7Q12.9e-0655.00Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_009663... [more]
M5VP991.4e-0549.25Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G228600 PE=4 SV=1[more]
A0A6J5Y6W41.4e-0549.25Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51915 PE=4 S... [more]
V4KY872.5e-0545.90Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10009900mg PE=... [more]
BLAST of Lsi05G009930 vs. NCBI nr
Match NameE-valueIdentityDescription
GAV66766.13.5e-0650.00hypothetical protein CFOL_v3_10276 [Cephalotus follicularis][more]
ONH93371.13.0e-0549.25hypothetical protein PRUPE_8G228600 [Prunus persica][more]
CAB4291562.13.0e-0549.25unnamed protein product [Prunus armeniaca] >CAB4321876.1 unnamed protein product... [more]
XP_006417956.15.1e-0545.90uncharacterized protein LOC18994259 [Eutrema salsugineum] >ESQ36309.1 hypothetic... [more]
CAA3005161.15.1e-0549.15Hypothetical predicted protein [Olea europaea subsp. europaea][more]
BLAST of Lsi05G009930 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G06137.11.4e-0539.71unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G06135.12.1e-0445.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G31345.17.8e-0439.34unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..80
NoneNo IPR availablePANTHERPTHR33592FAMILY NOT NAMEDcoord: 20..79
NoneNo IPR availablePANTHERPTHR33592:SF5TRANSMEMBRANE PROTEINcoord: 20..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G009930.1Lsi05G009930.1mRNA