Lsi05G009440 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G009440
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Non-specific lipid-transfer protein-like protein
Location	chr05: 16567978 .. 16571436 (-)
RNA-Seq Expression	Lsi05G009440
Synteny	Lsi05G009440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTAATGGGTCAATTATTTTCCTAGTTATTGTGGGTTTGAGCATAAGCCATGGGAGCTTGGGTCAGTCAAGTGGATGCACCACGGCCTTGATAAGCTTAGCTCCATGCTTAACTTACATCACTTCCACCGGAAGTAGCTCTTTGCCGGCCACTACTATCCCATCTTCCTCTTGCTGCTCACGCTTTGCCACCGTTGTTCAATCCCAGCCACAATGCCTTTGCTCCGCCCTCAATGGTGGTGCCGCCGCTTCTCTCGGTGTCACCATCAATCAGACTCGAGCTCTTGCGCTTCCTGCTGCTTGTCGTATCCAAACCCCGCCACCCACCCGTTGTAATGGTAATTACCTTCGTTTATTTTTTTATGTATCTCATTCTCATCACACCATTAATAATAATAATAATAATAATAAAATATTTTTGATATGATGTAAGAAGAATTTGTCACATGATTAATTATAATAGGACAATTTGGTGAGATGCACAAAGATTAGTATAGCATGAGATGCACCTAAGTATTTTTCATAAAGTCAATCATTTTCAATCATAGAAGAAAAAAATATATTTGTTAAAAAACATAAATTTGTCACGTGATATTTTATAATTAGGCACTTAAATTGAGAACCTGTGATTTTCTCATAGTATTAAATTTCGTCGATATGTCAATATTTTCACATTTTAATGGGTTTGAAATCGACATGAGGAGTGAATCGATATTTTTGTTATATCATAAAAAATTCACAAAACATAAAAAATAAACAACAAAATATCACTAATGTAAATATAATATAAATAACATACCTGTTAACTTGTTTAAAAATCATAAAATGTTTATTTATTAATTTAAATTTAAATTTTTTATTTTTTTAATTTTCTAGAAATATACCATCGAAATCTACATTTTATCGAAATTTCTGTAAAATTAAGATTTCGATATTTCCATCAACATCTATATTTTAAATGTTGAAGGTTGTTTTAAGTATATTTCCATACAATAATACTTAGACTTGAGTGATTTTTTTTTTTTTAAAAAAAAAAAACAATAAATTTGGGCGTTTGACAATCGAGGGAATTACCCAAAAGATGGGTGACGTGATGTGCCTACCTATTTTTCTTTTTAACAATTGACAAATGGAGCATGAGAGAATAGGGCTCTTTTTTCTTTTCTTTTTTCATTTTTTAGAAAAGTTAAATTATAAAAATTATTCTTTAAGTATGGAATTAGTTGTAATTATATTTTGAAATCATTTTAATTAATCTTTAACGTTTGAAGTTTTTTTCAAAACAATTCTTGACAGATCTGTTGAGAATCCCACATTGGAAAAATCAAAAGACATCACACTCTTAATAATATAGATGAGCAACTCTTTTATATTGCGAGTTGGTTTTGAGATGGAACTGTATTTGGATTACCATGTTTGTTTTGCCTTAATGTAAGATGTCGTGTAATTTAGAAATTTTTGAAGGGTGTCTCTAGAGTTTTGGATGTCTTTTTTAAAACATGAGTTTTCTGGATTCCTTTGATGACGGCATCCTTTTTTATTTTTTTTATTCTTTATTTTTTTCGTGTGTATGCGCGCACGTAAACACTTTCAACCACACACACTAAACAGATATTTAAATTCATATTATATTTAGTTTATAAAAAAGCTTAAATTTATATTTATTATTTTCTTGATAAAAATAACATATAAAAATAGTATAAATTATATTAATTTAAAAATAAATTCAAATAATAAAAAAACAGATATGTTATATAGGTTTAAATTATATTAAATTAATCATACGTTAATGAATAGTCATAAAGGCATTCTTGAAACATTATGTAAATTTAAGACATCCCGAGTAGAAATACTGAAACAAATACAGTTATCCAAGTATTTCCAAATATCTGCAAAAATATTCTTGTAAACAAATCTGGTTATCTAAAGATATCAAACATATGTAACTTCGAACATTTATAATTTCAGGCATCTAAAGATTTTGATTATCTACATTCCAAAAAACAAAATGAAGGTTTTTTTTGTAGTAAAAATTTATAGACGAAAAAAATTGTGTCTACTTATATATTGTTTAAGTGAACAAATCTAAACACAAATAGTAAATAAATTGTAGGATTAAAGTTAGAAGGAAGGAAAAAAAACATAAATGAAAGAACATAAATTGAGAGGCATATTTTGTCACATGCTCACAAAAGCTCACAAAGATTTATTTTAAAAAAAAAAAACTTGAAATTTCAAAGGGATAAAATGAGACTTTTAAAAGTGTGAAGTAATAATAAGGGAAATTTTTACATATAGAAAAAATGTCAAACTATTTACAGAAAATAGCAAAAAAAAAAAAAATGATAGATATTGATAGACTTCTATCGTTTCTACTACTAGACTTCTATCAGCGTTTATCACAACTATCTAAAAATTTTGTTATTTTGTGTAAATAGTTTCCCTTATTTTTCTATTTTTTTAAAATTTTCTAATAATAATTCAAGTTTATTTTTATTAATCTAACCCAAAAAAAAAAAAATACTTAGAAACTTGAATTATTTATAAGCTTGTAGTTTTAAATTTTCATTAAAGTTTTAAATTTAGGCTAAATTCCTAAACTTGTAGTTTTAGGTAGTTTTTGCGTTTTGTCCAAATTTTGCTCATCATAATTTTTAAAGAAATTTTAATAATATGTATATATATATATATATATAGAATAACCTATTTTGAGAACTTTTTAATATATGAAGTGTAAAATCAAGAATTTTATAAGAATGTAAGAACCAAATTTATCATTACCTAAATGTTAGACCATTTTATATATTTGTCCAAAATTTTAGGTTAAGTTTGATCCATTTGATTTTTTTTTCCAATTTAACTCCTATAATTTAATTAAGCCTCTATTTTATTCAACGGTTATACTACCACTTTTTCTCTAATTAATATTAATTTATATTTGTTGAACATTCTACAAAATTTCAAGCGCATAAATGAGAGTATATAATATTATAATGGAAGATTTGACTGAAGATATCATATTATAATGGAAGATTTAACTGAAGATATCATGGATGTCAAATGAAAATACAGATAATGACAATGGAGATGGCGCTCCAACAACATCCCCAATAAATTCGCCGGAAAATTCACCAGACAACGAAGAAGCTGGTGAAGCTCGTCCAACGGCAACGACAACATGGGAGGCTAGTTTTCCTCTACAATAGGCTCCGAAAATGTTCCAATAACCAGAGGAATACCATCGGACGACTGGAACTTAATCAACTCGCCCTTTTATCATCTCATTACTTTCGGCATACTTCTACCTCTATTACATTAAGCTTAATATTATTATTAAACTGGCCTACCACAAAATCAAAGATTAATTTTTCTTTGCATAATATTTATATATATACCTGTAAATTTTTAGTACTTCAATACTCTCGTGGTATCTTAACTTACTTTATTGTATGTT

mRNA sequence

ATGGAGATTAATGGGTCAATTATTTTCCTAGTTATTGTGGGTTTGAGCATAAGCCATGGGAGCTTGGGTCAGTCAAGTGGATGCACCACGGCCTTGATAAGCTTAGCTCCATGCTTAACTTACATCACTTCCACCGGAAGTAGCTCTTTGCCGGCCACTACTATCCCATCTTCCTCTTGCTGCTCACGCTTTGCCACCGTTGTTCAATCCCAGCCACAATGCCTTTGCTCCGCCCTCAATGGTGGTGCCGCCGCTTCTCTCGGTGTCACCATCAATCAGACTCGAGCTCTTGCGCTTCCTGCTGCTTATAATGACAATGGAGATGGCGCTCCAACAACATCCCCAATAAATTCGCCGGAAAATTCACCAGACAACGAAGAAGCTGGTGAAGCTCGTCCAACGGCAACGACAACATGGGAGGCTAGTTTTCCTCTACAATAGGCTCCGAAAATGTTCCAATAACCAGAGGAATACCATCGGACGACTGGAACTTAATCAACTCGCCCTTTTATCATCTCATTACTTTCGGCATACTTCTACCTCTATTACATTAAGCTTAATATTATTATTAAACTGGCCTACCACAAAATCAAAGATTAATTTTTCTTTGCATAATATTTATATATATACCTGTAAATTTTTAGTACTTCAATACTCTCGTGGTATCTTAACTTACTTTATTGTATGTT

Coding sequence (CDS)

ATGGAGATTAATGGGTCAATTATTTTCCTAGTTATTGTGGGTTTGAGCATAAGCCATGGGAGCTTGGGTCAGTCAAGTGGATGCACCACGGCCTTGATAAGCTTAGCTCCATGCTTAACTTACATCACTTCCACCGGAAGTAGCTCTTTGCCGGCCACTACTATCCCATCTTCCTCTTGCTGCTCACGCTTTGCCACCGTTGTTCAATCCCAGCCACAATGCCTTTGCTCCGCCCTCAATGGTGGTGCCGCCGCTTCTCTCGGTGTCACCATCAATCAGACTCGAGCTCTTGCGCTTCCTGCTGCTTATAATGACAATGGAGATGGCGCTCCAACAACATCCCCAATAAATTCGCCGGAAAATTCACCAGACAACGAAGAAGCTGGTGAAGCTCGTCCAACGGCAACGACAACATGGGAGGCTAGTTTTCCTCTACAATAG

Protein sequence

MEINGSIIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFATVVQSQPQCLCSALNGGAAASLGVTINQTRALALPAAYNDNGDGAPTTSPINSPENSPDNEEAGEARPTATTTWEASFPLQ

Homology

[Close]

BLAST of Lsi05G009440 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-14
Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = 0


Query: 1   MEINGSIIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSC 60
           M++   ++FL +    +S   +   S CT ALIS++PCL YIT   +S       P+  C
Sbjct: 1   MKMEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTS-------PNQQC 60

Query: 61  CSRFATVVQSQPQCLCSALNGGAAASLGVTINQTRALALPAA----------YNDNGDGA 120
           C++ + VVQS P CLC  LNGG  + LG+ +NQT+AL LP A           N  G G 
Sbjct: 61  CNQLSRVVQSSPDCLCQVLNGG-GSQLGINVNQTQALGLPRACNVQTPPVSRCNTGGGGG 120

Query: 121 PTTSPINSPENSPDNEEAGEARPT 135
            +TS  +SP  SP++   G    T
Sbjct: 121 GSTS--DSPAESPNSSGPGNGSKT 134

[Close]

BLAST of Lsi05G009440 vs. ExPASy Swiss-Prot
Match: F4HZB9 (Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3702 GN=LTPG19 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-14
Identity = 56/149 (37.58%), Postives = 76/149 (51.01%), Query Frame = 0


Query: 8   IFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFATV 67
           I  +++   +  G+    +GC   L SL+PCL Y+   GSSS      PS SCC +F+TV
Sbjct: 5   ILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNG-GSSS------PSWSCCRQFSTV 64

Query: 68  VQSQPQCLCSALNGGAAASLGVTINQTRALALPAAYN---------DNGDGAPTTSPINS 127
           VQS P+CLCS +N   ++  G   N+T AL LP A N         + G   PTT P N+
Sbjct: 65  VQSSPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANT 124

Query: 128 PENSPDN--EEAGEARPTATTTWEASFPL 146
           P  SP +    +G   P  T +    FPL
Sbjct: 125 PVGSPRSAPSPSGTTSPANTPSGSKKFPL 146

[Close]

BLAST of Lsi05G009440 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.6e-10
Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = 0


Query: 6   SIIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFA 65
           +I F+ +V    S      SS C + L +L+PCL+YIT         +T PS  CCSR  
Sbjct: 8   AITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGN-------STTPSQPCCSRLD 67

Query: 66  TVVQSQPQCLCSALNGGAAASLGVTINQTRALALPAAYNDNGDGAPTTSPINSPENSPDN 125
           +V++S PQC+CSA+N     ++G+ IN+T+AL LP A N         +    P   P  
Sbjct: 68  SVIKSSPQCICSAVN-SPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPA 127

Query: 126 EEAGEARPTATTT 139
               E  P  T T
Sbjct: 128 PSPTEKTPDVTLT 132

[Close]

BLAST of Lsi05G009440 vs. ExPASy Swiss-Prot
Match: Q2PE59 (Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3702 GN=LTPG26 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 26  SGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFATVVQSQPQCLCSALNGGAAA 85
           S CT  LIS+APCL++IT         T++PS  CC++ A VV+   +CLC  L+GG  +
Sbjct: 24  SSCTNVLISMAPCLSFITQN-------TSLPSQQCCNQLAHVVRYSSECLCQVLDGG-GS 83

Query: 86  SLGVTINQTRALALPAAYNDNGDGAPTTSPINSPENSPDNEEAGEARPT 135
            LG+ +N+T+ALALP A +      P  S  +S  +   + E G    T
Sbjct: 84  QLGINVNETQALALPKACHVE---TPPASRCHSGSSVNSHSEHGNGSKT 121

[Close]

BLAST of Lsi05G009440 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-06
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 6   SIIFLVIVGLSISHGSL-GQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRF 65
           S+  + ++G S  H +    S  C+T ++++A CL++++S G+ + P  T     CCS  
Sbjct: 20  SLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGT-----CCSGL 79

Query: 66  ATVVQSQPQCLCSALNGGAAASLGVTINQTRALALPAAYNDNGDGAPTTSPINSPENSP 124
            TV+++  QCLC A    ++ASLGVT+N T+A  LPAA   +     T     +P  +P
Sbjct: 80  KTVLKADSQCLCEAFK--SSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAP 131

[Close]

BLAST of Lsi05G009440 vs. ExPASy TrEMBL
Match: A0A0A0KGC1 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G410100 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.9e-36
Identity = 97/150 (64.67%), Postives = 114/150 (76.00%), Query Frame = 0


Query: 7   IIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFAT 66
           ++ +V+VGLS+SH SLGQS GCTTALI+L+PCLTYI +   ++   T  PSSSCCSR AT
Sbjct: 10  LVTVVVVGLSMSHSSLGQSGGCTTALITLSPCLTYINAAAGTTTSNT--PSSSCCSRLAT 69

Query: 67  VVQSQPQCLCSALN-GGAAASLGVTINQTRALALPAA--------YNDNGDGAPTTSPIN 126
           V+QS+P+CLCSAL+ GGAAASLGVTINQTRAL LPAA           NG  APT SP++
Sbjct: 70  VLQSKPRCLCSALSGGGAAASLGVTINQTRALQLPAACRLQTPPPSRCNGVAAPTVSPVS 129

Query: 127 SPENSPDNEEAGEARPT--ATTTW-EASFP 145
           SPENSPD EE GEARPT   TTTW + SFP
Sbjct: 130 SPENSPDEEEDGEARPTTWTTTTWDQPSFP 157

[Close]

BLAST of Lsi05G009440 vs. ExPASy TrEMBL
Match: A0A1S3BLF1 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=3656 GN=LOC103491327 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 8.4e-36
Identity = 96/153 (62.75%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 7   IIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFAT 66
           I+  V+VGLS+SH SLGQS GCTTALI+L+PCLTYI +   +   A+  PSSSCCSR AT
Sbjct: 9   ILVSVVVGLSMSHSSLGQSGGCTTALITLSPCLTYINAAAGT---ASNTPSSSCCSRLAT 68

Query: 67  VVQSQPQCLCSALN-GGAAASLGVTINQTRALALPAA-------------YNDNGDGAPT 126
           +VQSQP+CLCSAL+ GGAAASLGVTINQTRAL LPAA              N+ G   PT
Sbjct: 69  IVQSQPRCLCSALSGGGAAASLGVTINQTRALQLPAACRLQTPPPSRCNENNNEGLATPT 128

Query: 127 TSPINSPENSPDNEEAGEARPTATTTW-EASFP 145
            SP++SPENSPD EE GEA  T TTTW + SFP
Sbjct: 129 VSPVSSPENSPDEEEDGEAPSTWTTTWDQTSFP 158

[Close]

BLAST of Lsi05G009440 vs. ExPASy TrEMBL
Match: A0A5A7UN30 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00410 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.1e-33
Identity = 90/143 (62.94%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 17  ISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFATVVQSQPQCLC 76
           +SH SLGQS GCTTALI+L+PCLTYI +   +   A+  PSSSCCSR AT+VQSQP+CLC
Sbjct: 1   MSHSSLGQSGGCTTALITLSPCLTYINAAAGT---ASNTPSSSCCSRLATIVQSQPRCLC 60

Query: 77  SALN-GGAAASLGVTINQTRALALPAA-------------YNDNGDGAPTTSPINSPENS 136
           SAL+ GGAAASLGVTINQTRAL LPAA              N+ G   PT SP++SPENS
Sbjct: 61  SALSGGGAAASLGVTINQTRALQLPAACRLQTPPPSRCNENNNEGLATPTVSPVSSPENS 120

Query: 137 PDNEEAGEARPTATTTW-EASFP 145
           PD EE GEA  T TTTW + SFP
Sbjct: 121 PDEEEDGEAPSTWTTTWDQTSFP 140

[Close]

BLAST of Lsi05G009440 vs. ExPASy TrEMBL
Match: A0A6J1EXB7 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata OX=3662 GN=LOC111437366 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 6.6e-33
Identity = 91/147 (61.90%), Postives = 106/147 (72.11%), Query Frame = 0


Query: 6   SIIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFA 65
           S +FL++V   +SH S+ QS+GCTTALISL+PCLTYIT +G SS   +T PSSSCCSR A
Sbjct: 23  SALFLLLVAFGMSHESVAQSAGCTTALISLSPCLTYITGSGGSS--TSTAPSSSCCSRLA 82

Query: 66  TVVQSQPQCLCSALNGGAAASLGVTINQTRALALPAAYN------------DNGDGAPTT 125
           TVVQSQPQCLCSALNGGAA SLGVTIN+TRAL LPAA +            +    AP  
Sbjct: 83  TVVQSQPQCLCSALNGGAAVSLGVTINRTRALGLPAACSVQTPPPSRCNDANGAAAAPAI 142

Query: 126 SPINSPENSP-DNEEAGEARPTATTTW 140
           SPI+SP NSP D+EE GEA  T  TT+
Sbjct: 143 SPISSPGNSPSDDEELGEAPTTRETTF 167

[Close]

BLAST of Lsi05G009440 vs. ExPASy TrEMBL
Match: A0A6J1K123 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima OX=3661 GN=LOC111491438 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 6.2e-31
Identity = 89/146 (60.96%), Postives = 102/146 (69.86%), Query Frame = 0


Query: 6   SIIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFA 65
           S +FL++V   +SH S+ QS GCTTALISL+PCLTY T +G SS   +T PSSSCCSR A
Sbjct: 5   SALFLLLVAFGMSHESVAQSVGCTTALISLSPCLTYTTGSGGSS--TSTAPSSSCCSRLA 64

Query: 66  TVVQSQPQCLCSALNGGAAASLGVTINQTRALALPAAYN------------DNGDGAPTT 125
           TVVQSQPQCLCSALNGGAA SLGVTIN+TRAL LPAA N            +    AP  
Sbjct: 65  TVVQSQPQCLCSALNGGAAVSLGVTINRTRALGLPAACNVQTPPPSRCNDANGAAAAPPI 124

Query: 126 SPINSPENSP-DNEEAGEARPTATTT 139
           SPI+SP +SP D+EE GEA  T   T
Sbjct: 125 SPISSPGSSPSDDEELGEAPTTREKT 148

[Close]

BLAST of Lsi05G009440 vs. NCBI nr
Match: XP_038888862.1 (non-specific lipid transfer protein GPI-anchored 19-like [Benincasa hispida])

HSP 1 Score: 185.3 bits (469), Expect = 3.8e-43
Identity = 109/156 (69.87%), Postives = 120/156 (76.92%), Query Frame = 0


Query: 1   MEINGSIIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSC 60
           M IN SII +V+VGLS+SHGSLGQSSGCTTALISL+PCLTYIT+TG      TT PSSSC
Sbjct: 1   MGINESIILVVVVGLSMSHGSLGQSSGCTTALISLSPCLTYITATG------TTSPSSSC 60

Query: 61  CSRFATVVQSQPQCLCSALNGGAAASLGVTINQTRALALPAA----------YNDNGDG- 120
           CSR ATVVQSQP+CLCSALNGGAAASLGVTINQTRALALPAA           NDNG+G 
Sbjct: 61  CSRLATVVQSQPRCLCSALNGGAAASLGVTINQTRALALPAACRLQTPPPTRCNDNGNGG 120

Query: 121 -APTTSPINSPENSPDNEEAGEARPTATTTWEASFP 145
             P  SPI+S +   D+EE GEA  T  TTWE+SFP
Sbjct: 121 EGPIISPISSSDKLADDEEVGEAPSTPATTWESSFP 150

[Close]

BLAST of Lsi05G009440 vs. NCBI nr
Match: XP_008449442.1 (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo])

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-35
Identity = 96/153 (62.75%), Postives = 111/153 (72.55%), Query Frame = 0


Query: 7   IIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFAT 66
           I+  V+VGLS+SH SLGQS GCTTALI+L+PCLTYI +   +   A+  PSSSCCSR AT
Sbjct: 9   ILVSVVVGLSMSHSSLGQSGGCTTALITLSPCLTYINAAAGT---ASNTPSSSCCSRLAT 68

Query: 67  VVQSQPQCLCSALN-GGAAASLGVTINQTRALALPAA-------------YNDNGDGAPT 126
           +VQSQP+CLCSAL+ GGAAASLGVTINQTRAL LPAA              N+ G   PT
Sbjct: 69  IVQSQPRCLCSALSGGGAAASLGVTINQTRALQLPAACRLQTPPPSRCNENNNEGLATPT 128

Query: 127 TSPINSPENSPDNEEAGEARPTATTTW-EASFP 145
            SP++SPENSPD EE GEA  T TTTW + SFP
Sbjct: 129 VSPVSSPENSPDEEEDGEAPSTWTTTWDQTSFP 158

[Close]

BLAST of Lsi05G009440 vs. NCBI nr
Match: KAA0057313.1 (non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa] >TYK13422.1 non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-32
Identity = 90/143 (62.94%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 17  ISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFATVVQSQPQCLC 76
           +SH SLGQS GCTTALI+L+PCLTYI +   +   A+  PSSSCCSR AT+VQSQP+CLC
Sbjct: 1   MSHSSLGQSGGCTTALITLSPCLTYINAAAGT---ASNTPSSSCCSRLATIVQSQPRCLC 60

Query: 77  SALN-GGAAASLGVTINQTRALALPAA-------------YNDNGDGAPTTSPINSPENS 136
           SAL+ GGAAASLGVTINQTRAL LPAA              N+ G   PT SP++SPENS
Sbjct: 61  SALSGGGAAASLGVTINQTRALQLPAACRLQTPPPSRCNENNNEGLATPTVSPVSSPENS 120

Query: 137 PDNEEAGEARPTATTTW-EASFP 145
           PD EE GEA  T TTTW + SFP
Sbjct: 121 PDEEEDGEAPSTWTTTWDQTSFP 140

[Close]

BLAST of Lsi05G009440 vs. NCBI nr
Match: XP_022931068.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata])

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-32
Identity = 91/147 (61.90%), Postives = 106/147 (72.11%), Query Frame = 0


Query: 6   SIIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFA 65
           S +FL++V   +SH S+ QS+GCTTALISL+PCLTYIT +G SS   +T PSSSCCSR A
Sbjct: 23  SALFLLLVAFGMSHESVAQSAGCTTALISLSPCLTYITGSGGSS--TSTAPSSSCCSRLA 82

Query: 66  TVVQSQPQCLCSALNGGAAASLGVTINQTRALALPAAYN------------DNGDGAPTT 125
           TVVQSQPQCLCSALNGGAA SLGVTIN+TRAL LPAA +            +    AP  
Sbjct: 83  TVVQSQPQCLCSALNGGAAVSLGVTINRTRALGLPAACSVQTPPPSRCNDANGAAAAPAI 142

Query: 126 SPINSPENSP-DNEEAGEARPTATTTW 140
           SPI+SP NSP D+EE GEA  T  TT+
Sbjct: 143 SPISSPGNSPSDDEELGEAPTTRETTF 167

[Close]

BLAST of Lsi05G009440 vs. NCBI nr
Match: XP_023534720.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-32
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 6   SIIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFA 65
           S +FL++V   +SH S+ QS+GCTTALISL+PCLTYIT +G SS   +T PSSSCCSR A
Sbjct: 23  SALFLLLVAFGMSHESVAQSAGCTTALISLSPCLTYITGSGGSS--TSTAPSSSCCSRLA 82

Query: 66  TVVQSQPQCLCSALNGGAAASLGVTINQTRALALPAAYN---------DNGDG---APTT 125
           TVVQSQPQCLCSALNGGAA SLGVTIN+TRAL LPAA +         D+ +G   AP  
Sbjct: 83  TVVQSQPQCLCSALNGGAAVSLGVTINRTRALGLPAACSVQTPPPSRCDDANGAAAAPAI 142

Query: 126 SPINSPENSP-DNEEAGEARPTATTTW 140
           SPI+SP +SP D+EE GEA  T  TT+
Sbjct: 143 SPISSPGSSPSDDEELGEAPTTRETTF 167

[Close]

BLAST of Lsi05G009440 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-15
Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = 0


Query: 1   MEINGSIIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSC 60
           M++   ++FL +    +S   +   S CT ALIS++PCL YIT   +S       P+  C
Sbjct: 1   MKMEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTS-------PNQQC 60

Query: 61  CSRFATVVQSQPQCLCSALNGGAAASLGVTINQTRALALPAA----------YNDNGDGA 120
           C++ + VVQS P CLC  LNGG  + LG+ +NQT+AL LP A           N  G G 
Sbjct: 61  CNQLSRVVQSSPDCLCQVLNGG-GSQLGINVNQTQALGLPRACNVQTPPVSRCNTGGGGG 120

Query: 121 PTTSPINSPENSPDNEEAGEARPT 135
            +TS  +SP  SP++   G    T
Sbjct: 121 GSTS--DSPAESPNSSGPGNGSKT 134

[Close]

BLAST of Lsi05G009440 vs. TAIR 10
Match: AT1G03103.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15
Identity = 56/149 (37.58%), Postives = 76/149 (51.01%), Query Frame = 0


Query: 8   IFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFATV 67
           I  +++   +  G+    +GC   L SL+PCL Y+   GSSS      PS SCC +F+TV
Sbjct: 5   ILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNG-GSSS------PSWSCCRQFSTV 64

Query: 68  VQSQPQCLCSALNGGAAASLGVTINQTRALALPAAYN---------DNGDGAPTTSPINS 127
           VQS P+CLCS +N   ++  G   N+T AL LP A N         + G   PTT P N+
Sbjct: 65  VQSSPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANT 124

Query: 128 PENSPDN--EEAGEARPTATTTWEASFPL 146
           P  SP +    +G   P  T +    FPL
Sbjct: 125 PVGSPRSAPSPSGTTSPANTPSGSKKFPL 146

[Close]

BLAST of Lsi05G009440 vs. TAIR 10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 5.4e-11
Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = 0


Query: 6   SIIFLVIVGLSISHGSLGQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFA 65
           +I F+ +V    S      SS C + L +L+PCL+YIT         +T PS  CCSR  
Sbjct: 8   AITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGN-------STTPSQPCCSRLD 67

Query: 66  TVVQSQPQCLCSALNGGAAASLGVTINQTRALALPAAYNDNGDGAPTTSPINSPENSPDN 125
           +V++S PQC+CSA+N     ++G+ IN+T+AL LP A N         +    P   P  
Sbjct: 68  SVIKSSPQCICSAVN-SPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPA 127

Query: 126 EEAGEARPTATTT 139
               E  P  T T
Sbjct: 128 PSPTEKTPDVTLT 132

[Close]

BLAST of Lsi05G009440 vs. TAIR 10
Match: AT4G14815.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 26  SGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRFATVVQSQPQCLCSALNGGAAA 85
           S CT  LIS+APCL++IT         T++PS  CC++ A VV+   +CLC  L+GG  +
Sbjct: 24  SSCTNVLISMAPCLSFITQN-------TSLPSQQCCNQLAHVVRYSSECLCQVLDGG-GS 83

Query: 86  SLGVTINQTRALALPAAYNDNGDGAPTTSPINSPENSPDNEEAGEARPT 135
            LG+ +N+T+ALALP A +      P  S  +S  +   + E G    T
Sbjct: 84  QLGINVNETQALALPKACHVE---TPPASRCHSGSSVNSHSEHGNGSKT 121

[Close]

BLAST of Lsi05G009440 vs. TAIR 10
Match: AT5G64080.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-08
Identity = 42/125 (33.60%), Postives = 68/125 (54.40%), Query Frame = 0


Query: 6   SIIFLVIVGLSISHGSL-GQSSGCTTALISLAPCLTYITSTGSSSLPATTIPSSSCCSRF 65
           S+  + ++G S  H +    S  C+T ++++A CL++++S G+ + P  T     CCS  
Sbjct: 20  SLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGT-----CCSGL 79

Query: 66  ATVVQSQPQCLCSALNGGAAASLGVTINQTRALALPAAYNDNGDGAPTTSPINSPENSPD 125
            TV+++  QCLC A    ++ASLGVT+N T+A  LPAA   +     T     +P  +P 
Sbjct: 80  KTVLKADSQCLCEAFK--SSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPG 137

Query: 126 NEEAG 130
              AG
Sbjct: 140 VAAAG 137

The following BLAST results are available for this feature:

BLAST of Lsi05G009440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJ86	1.7e-14	37.50	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]
F4HZB9	3.9e-14	37.58	Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3...	[more]
Q7EB72	7.6e-10	35.34	Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE59	1.7e-09	38.53	Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3...	[more]
Q8VYI9	1.0e-06	33.61	Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Lsi05G009440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGC1	2.9e-36	64.67	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G410100 PE=4 SV...	[more]
A0A1S3BLF1	8.4e-36	62.75	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=36...	[more]
A0A5A7UN30	5.1e-33	62.94	Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1EXB7	6.6e-33	61.90	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata...	[more]
A0A6J1K123	6.2e-31	60.96	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima O...	[more]

BLAST of Lsi05G009440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888862.1	3.8e-43	69.87	non-specific lipid transfer protein GPI-anchored 19-like [Benincasa hispida]	[more]
XP_008449442.1	1.7e-35	62.75	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis m...	[more]
KAA0057313.1	1.1e-32	62.94	non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa] >TYK...	[more]
XP_022931068.1	1.4e-32	61.90	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata]	[more]
XP_023534720.1	1.8e-32	62.59	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp...	[more]

BLAST of Lsi05G009440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22600.1	1.2e-15	37.50	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G03103.1	2.8e-15	37.58	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48130.1	5.4e-11	35.34	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G14815.1	1.2e-10	38.53	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G64080.2	4.3e-08	33.60	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 28..95 e-value: 0.0072 score: 25.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 24..102 e-value: 7.0E-11 score: 42.1
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 25..107 e-value: 4.8E-14 score: 54.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 27..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..124
None	No IPR available	PANTHER	PTHR33044:SF198	NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 2-LIKE ISOFORM X1	coord: 9..128
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 35..102 e-value: 3.09156E-16 score: 66.2962
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 9..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G009440.1	Lsi05G009440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031224	intrinsic component of membrane