Lsi05G009070 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G009070
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein PALE CRESS, chloroplastic
Locationchr05: 16233850 .. 16239588 (-)
RNA-Seq ExpressionLsi05G009070
SyntenyLsi05G009070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTATAGTGTTCTACTCATGGGTAGTATTCATGGTGAATTTTCTTTGAATTTTTCCAATTTCATACCATTTTTCACATAAAGCTCTGACAATTCGATTATTGCAAAAATGGCTTAGAAATTTACTGATACTATAGTTGTTCATCAATTTAAATGCAGAAAATTGAAGAGGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGGCTTGATTTAGCACGTCGTGATGTATGTTTTTCTTCAAATTCCTTTTAATTTTAATTTACTTGCTTATTTTGGAGGGAGCCTAGTTCTATGTGCTTACTTATAACTGGCTCTTTCTTCAGGATGAAAAGGATGCAATTAGAAGTCTTGATCTGCTATATCGAAGGGTAGAGGTATGAGCATTTTTTGAACTGTTTTAAACATGCCATGTTTGTTACGATCTTAAAGAACACTCACTCAAGTCCTCCTTAGTCACACTCAGTACATGGAAGTTATGCAATTATAGGTGAAGGAAAATATTCAAAACTTATCCCAAGGATCAATCTTAAATTTATGGTTAAATAATTAAAAATACTCTTGCACTTTTAAAAATACCTTTGAACTTTAAAAAGTCTAAAAAATACCCTGAACTTTCAAAAAGGTTCAAAATGCCTCCACTATTAGTAGACCACACACAAAATTGACGTGGACTGATGAATGTCAACACCAGTGTATTACATGGAAGAAAATGAATACTAGATGGTTTGAGCCTTTGAGGTGTAAAAAATTATGGAAATCTGTGTTTATCAATTTACAGTGTGCTCTCCTCATTTTGTTCTTTCTACAGCACACACAGTCACACATTCAAATCTTCCATTAAGGACCATATCCATTAATTTCAAAAGATAAAGGCCCCTTTTTCCTTTCCGTATGCTTTTCTTTTAATTTTTCTTTCATAGCTTCAACAGTGACTGCTCTAATCTCCGTCAAAATCTAAACACATGCACTTTTCTGACATTTTGAACACCAAAGCCTTCATTTTGACCCTCTACTTTCCAAGGGATCGATTCAACAATAAACTTTTATCTACTCCTATGTGATTTCTTATACCCTCTATCTCTTCAAGATTAAAGATGAAAACTCCATAAAAGCTCACAAAGTTTCAAGATTCTAAGTTTCTTCAAAAATTAACTTACCAAAACAAAAATCTTCACCAAATCTGAATAAAGGCTATTGACCATGATTCATGCTCTCAACTCTTCTCCTTCAATAACCCTCCTTCCTTATTTTCCTTTCTTTCCCACGTTTTCTGTTTTTTTTTTCCCTTCTTCCTCTTGTTTTTTTATTTTTATTTTTTAATTTTTTTTAAAAGGAAACCAGCCTCTTCAATGAAATAATGAAATGAGACTATTGCTCAAAGTACAATAAAGATACACTATGAGTGAAAGTAACCTAAGGATCAGGAAATGCACCCGAGAATTTCAACTAGGTCGACACCCCCTTAGCATCCACATCATATCCATTAAAGATCTAACAAAAACGTTCCAAAAATCATAGAGAACAAAAAGCACAAACAGTCCAAACGGTGTCAATACATCACAATTCACAAATATAAACTTAAGCTGGAAAAATAAAAGTGTGCCAATTTAAACATAAGTCTTCTTTTTCCATTTTTTCTTTTCTTCAAAACTCCTTGGTGGGAGGCCATGAGTCAAAAGCACATCGTAAATCTACTTCGAGTCAGACTTGTTGAGAGCATAAGGATCTACAATTGAAAATTTGAAGTAGAAGAAGGAGAACTAGAGGAGCATGGAGAAAGGTGGAATTGAGAAGCATGGTGTTGAGGCGCAATGACATGAGGCAATTTTGCCTCTTGTTTTAATTGGGTGATTATCTTCAAACGAGTGCTCGCCTGGCGGTGCCTCACGGTGACTTTGCCATTGATGAAAGCGTGCACCTAGCAAAGTATTCTGTCTCTTGTTTTGGAAAAAAAAATATGCATGATATCCAAGAAATTCAGTCGATGAAGCCCATGAAGAAAAAGCCCACATTAAGACTTTCCATGCAGAGAATATTTTATTCGAATTAAACATTCTAAAGTTGGCATCTTCAGCTACTTCAAATCATCTTCTTTGATTTCTTCAACTTCTTGAATGGGTTTGCTTCTTCACAAAGTACGACGTCCTCTTCAAGGCTTTTTTTTGCAAACGAATGACAGTCTTCCTCTTCTAGCTTCCTACTAATTCTTCTTCTTAAAAATATCTATTATATATATATATATATATATATATTCATGAGTATCCGGACCTGCTTACGCGCACCTTGATTGATCTCACGGGACAACCCATGAGGTTGATTTTAAGTTTTAAGTGTAAAAGCATTAAACTAAATTTTAATATTTTCTTGTCGGTTTGGTGGTCACTGATCACAATGATTTTGAGTTTTTTTTCCACTTTTTTGAAAGTTGAAACCGAGTGAGTTCTTTGGTAAGTTTTAAAATAATAAAGTTATATTATAGTATACACACTACTATGTTATATTATATCTTAAGATTTAGTGAGTTGATTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTAGTTTAGTTTATATTCTATCTTATTATTAATTTATAATGTTACGCGAATTGAAATTTATTATATTAATTTTTTTAAAGTTGTTTCTTTCGTGTAGGCTAGTAGCATCTGGGTGATTTTTAAAGTTTAGTTTCTATTCTTTTATGATAGGATGGATGTTGTGAGTTTGCAAGTTCTGTTTGGGAGTTATTTTTTTAGACGTTTGGTATTTCGTGTGCCCGTTAGAGAGACACTGGTGTTATGATCGAGGAGTTTCTCCTCAATCCACCTCGTGGGAGAAGGGTCACTTTTTATAGCTTGTTGGATTGTGTGCTATCTTACGGACTTTGTGGGGTGAGCGGAATAGTAGGATTTTTAGAGGGGTGGATAGGGACCCTAGTGAGATTTGGTCTCTTGTTCATTGTCGTGTTTCTTTGTGGGCTTCGATTTCAAAGACCTTTTGTAAGCTATAGACGTTATTTAAGCTGAGGTCCTTTCTTATAAAGGGGGGTTTCTTTTTTGTGGGCTTAGTTTTTTGTACGTCCGTGTATTCTTTCATTTTTTTCTCAATGAAAATTGTTTCTATATTAAACAAAAAAAGGATGGGAGAAAGGGAACAAAACCTGCAAATATCCCGGTTGGCAATATGTCATATTAGAAAATAAAAAGGATACAAACACTTGCAAATGTATGTTTTGCGGAAAAATTACCAAGGGTGACATTTGTCGAGCAACAAAACACTTAGTGGAAATTGAAATTTAAGCATGCTTAAAGTGTCTAACTAATGTAAGAGATGAAATGAAAGGGTATCAAATAAGGACAAAAGCAAAGAGGGAGGAAAGTAATGTCCTCCCAAACTATGATGCAAATGATTTGAACATTATGGATGGAGAAGAGATGGAGGATGAAATGGAAGTTGGTGGATCAAGTATTAGAACATCTAGAAAACGAGCAAACATGACTGGCAGTGTGAGTTTTGTGGAGAAAGAGAAGGAAGTAGTTCCAGTTTCCAAAGAAGTCCATCTCAATCACAAGCAAAGCTCGAACTAAGGGAGCAATGGATAAATTTGTATATCCAAATTCAGCCAAGGTTGTTGATGATTGGAATAGATTAAAGAACCTGAAGCAATTAAGCATCACTAAAAAATACATCAAAGAAGAAGAAATGTTGCAGTTCGATTTATCATGCGTTGGATTTATCAAGTAGGTATTCCATTAAATACAAATTCGATTAAAATGTTTTCATGTAATGCTGGAAGTTGTGAGACAATTTGGACATGGTCTAATACCTCCTTATCATGAGGCTAGAGTAACAATCTAATGAGTAGCCATGAGGTTGACCGGAAAAGAAATAGTTGTTCTTTGATGTCTAATGGGTGGACCGATAGAAGAGATAGGACCCTGATAAATTTTTTAGTGCATGTTGCTGTTGGAACATTGTTTTTGGAGTCGATTGATGCACCTTCAGGCATCAAGATTGGAGACAAGGTATTGAACTCTTGGATAGAGTGGTTGAAAACACTACTTTTTTTAAGAGAGAGAGAATGGTTGAAAACACTACTCTAAACTTAAATCGCTATATGGGTATGTTAGGTATCTACCCCCTGCACTCAGTAAATCCCAACAAGATGTTTATAGACAAAAGATAGAAGGCACAATTCTCTGCTGAGATATATGTATATATAAGATTCAAGAAGTCTCAATATAGTAAGCAATGTTCCCAGACAATTTGGAAATAAGCAAGAAGTAAGAACACTCAGAATATAGAAATAGAACTAAGGACCAGCACATTAGAGAGAGCTGGTGATCCTCTCCTTTCTCTCCCAAAATTAGGGCCTGCACAAGAATACTCTGCATACCCTCCCTTTCCTCTGCCATTCTTTATTTATCAACATTCCAAGAGGAGGTCCCCCCCTCTCCACACACTTCCAACTGTATTTCCCCCACTACCAACTAATTCCACCTCACTTCTCATTTCCCATTTTGCCCTTCCTCTTATAAGTATAAACGATTGGGGGCCTAACAGGGCACCTCTAACTGCATCTTGCTTGAAATGGCCATTTCTCTAGATGTCTCTATCACCTCTTTCATACTTTATAGAAAACAGAGAGCCTAACTCTAGGATTGAAGAACTCGTTGGACCTTTGTTCCTAGGCTCTTTTTGTAATTTGCTAGGTCTTATTTCTTTTGATTGGAGCCCTTTTCTTGTAGTTCAACTACTTTTATGAGTTTTCCTTTTTGTATACTATGTATTCTTTCGTTTTTTTCACAAAGAAAGTAAAAATTTTCATCCAAAAAAAGAAGGAAAAGACTTTGGATTAGAAGAAAAGCCCACCTTATTCCATCTAATTTCTTCAAAACAGGTCATTCTCCATGCACACCAAATAGGCAACTGCATTCCTTTAAATCAATGATCGATCTTTGGCCCAAAACTTATATTTCTCTCGTTTCCTCTAGACTTTATACCTCAAGAGGGCAGTATTCAGGCCTTGATAATCGCTAA

mRNA sequence

ATGATTATAAAAATTGAAGAGGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGGCTTGATTTAGCACGTCGTGATGATGAAAAGGATGCAATTAGAAGTCTTGATCTGCTATATCGAAGGGTAGAGTGTCTAACTAATGTAAGAGATGAAATGAAAGGGTATCAAATAAGGACAAAAGCAAAGAGGGAGGAAAGTAATGTCCTCCCAAACTATGATGCAAATGATTTGAACATTATGGATGGAGAAGAGATGGAGGATGAAATGGAAGTTGGTGGATCAAGTATTAGAACATCTAGAAAACGAGCAAACATGACTGGCAGTGTGAGTTTTGTGGAGAAAGAGAAGGAATTTCCAAAGAAGTCCATCTCAATCACAAGCAAAGCTCGAACTAAGGGAGCAATGGATAAATTTGTATATCCAAATTCAGCCAAGGTTGTTGATGATTGGAATAGATTAAAGAACCTGAAGCAATTAAGCATCACTAAAAAATACATCAAAGAAGAAGAAATGTTGCAGTTCGATTTATCATGCGTTGGATTTATCAAACTTTATACCTCAAGAGGGCAGTATTCAGGCCTTGATAATCGCTAA

Coding sequence (CDS)

ATGATTATAAAAATTGAAGAGGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGGCTTGATTTAGCACGTCGTGATGATGAAAAGGATGCAATTAGAAGTCTTGATCTGCTATATCGAAGGGTAGAGTGTCTAACTAATGTAAGAGATGAAATGAAAGGGTATCAAATAAGGACAAAAGCAAAGAGGGAGGAAAGTAATGTCCTCCCAAACTATGATGCAAATGATTTGAACATTATGGATGGAGAAGAGATGGAGGATGAAATGGAAGTTGGTGGATCAAGTATTAGAACATCTAGAAAACGAGCAAACATGACTGGCAGTGTGAGTTTTGTGGAGAAAGAGAAGGAATTTCCAAAGAAGTCCATCTCAATCACAAGCAAAGCTCGAACTAAGGGAGCAATGGATAAATTTGTATATCCAAATTCAGCCAAGGTTGTTGATGATTGGAATAGATTAAAGAACCTGAAGCAATTAAGCATCACTAAAAAATACATCAAAGAAGAAGAAATGTTGCAGTTCGATTTATCATGCGTTGGATTTATCAAACTTTATACCTCAAGAGGGCAGTATTCAGGCCTTGATAATCGCTAA

Protein sequence

MIIKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVECLTNVRDEMKGYQIRTKAKREESNVLPNYDANDLNIMDGEEMEDEMEVGGSSIRTSRKRANMTGSVSFVEKEKEFPKKSISITSKARTKGAMDKFVYPNSAKVVDDWNRLKNLKQLSITKKYIKEEEMLQFDLSCVGFIKLYTSRGQYSGLDNR
Homology
[Close]
BLAST of Lsi05G009070 vs. ExPASy Swiss-Prot
Match: Q39089 (Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAC PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.4e-16
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 4   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 50
           +IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVE
Sbjct: 127 RIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVE 172

[Close]
BLAST of Lsi05G009070 vs. ExPASy TrEMBL
Match: A0A6J1K329 (protein PALE CRESS, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491264 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.6e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 4   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 50
           KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Sbjct: 128 KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 173

[Close]
BLAST of Lsi05G009070 vs. ExPASy TrEMBL
Match: A0A6J1DYX0 (protein PALE CRESS, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025878 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.6e-15
Identity = 54/79 (68.35%), Postives = 57/79 (72.15%), Query Frame = 0 

Query: 4   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVECLTNVRDEMKGYQI 63
           KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE     R+       
Sbjct: 128 KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE------- 187

Query: 64  RTKAKREESNVLPNYDAND 83
            T A R  + +L  YD  D
Sbjct: 188 ATPAMRLLNELLNMYDGFD 199

[Close]
BLAST of Lsi05G009070 vs. ExPASy TrEMBL
Match: A0A6J1EYI4 (protein PALE CRESS, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437380 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.6e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 4   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 50
           KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Sbjct: 128 KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 173

[Close]
BLAST of Lsi05G009070 vs. ExPASy TrEMBL
Match: A0A022S2N8 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a010526mg PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 8.7e-15
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 4   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 50
           KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDA+RSLDLLYRRVE
Sbjct: 129 KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAVRSLDLLYRRVE 174

[Close]
BLAST of Lsi05G009070 vs. ExPASy TrEMBL
Match: A0A6P4AA29 (protein PALE CRESS, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=LOC107425984 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-14
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 4   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 50
           KIEEAAEKGELTELVL+VIWNRLDLARRDDEKDAIRSLDLLYRRVE
Sbjct: 134 KIEEAAEKGELTELVLMVIWNRLDLARRDDEKDAIRSLDLLYRRVE 179

[Close]
BLAST of Lsi05G009070 vs. NCBI nr
Match: KAG7036373.1 (Protein PALE CRESS, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 3   IKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 50
           +KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Sbjct: 132 LKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 178

[Close]
BLAST of Lsi05G009070 vs. NCBI nr
Match: XP_022995861.1 (protein PALE CRESS, chloroplastic [Cucurbita maxima])

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-14
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 4   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 50
           KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Sbjct: 128 KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 173

[Close]
BLAST of Lsi05G009070 vs. NCBI nr
Match: XP_023534033.1 (protein PALE CRESS, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-14
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 4   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 50
           KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Sbjct: 128 KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 173

[Close]
BLAST of Lsi05G009070 vs. NCBI nr
Match: XP_022159473.1 (protein PALE CRESS, chloroplastic [Momordica charantia])

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-14
Identity = 54/79 (68.35%), Postives = 57/79 (72.15%), Query Frame = 0 

Query: 4   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVECLTNVRDEMKGYQI 63
           KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE     R+       
Sbjct: 128 KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE------- 187

Query: 64  RTKAKREESNVLPNYDAND 83
            T A R  + +L  YD  D
Sbjct: 188 ATPAMRLLNELLNMYDGFD 199

[Close]
BLAST of Lsi05G009070 vs. NCBI nr
Match: XP_022931090.1 (protein PALE CRESS, chloroplastic [Cucurbita moschata])

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-14
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 4   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 50
           KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Sbjct: 128 KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 173

[Close]
BLAST of Lsi05G009070 vs. TAIR 10
Match: AT2G48120.1 (pale cress protein (PAC) )

HSP 1 Score: 86.3 bits (212), Expect = 3.2e-17
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 4   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 50
           +IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVE
Sbjct: 127 RIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVE 172

[Close]
BLAST of Lsi05G009070 vs. TAIR 10
Match: AT2G48120.2 (pale cress protein (PAC) )

HSP 1 Score: 86.3 bits (212), Expect = 3.2e-17
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 4   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE 50
           +IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVE
Sbjct: 121 RIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVE 166

The following BLAST results are available for this feature:
BLAST of Lsi05G009070 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q390894.4e-1691.30Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAC PE=2 SV... [more]
BLAST of Lsi05G009070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K3296.6e-15100.00protein PALE CRESS, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491264 PE... [more]
A0A6J1DYX06.6e-1568.35protein PALE CRESS, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025878... [more]
A0A6J1EYI46.6e-15100.00protein PALE CRESS, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437380 ... [more]
A0A022S2N88.7e-1597.83Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a010526mg PE... [more]
A0A6P4AA291.1e-1497.83protein PALE CRESS, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=LOC107425... [more]
BLAST of Lsi05G009070 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7036373.11.1e-1497.87Protein PALE CRESS, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022995861.11.4e-14100.00protein PALE CRESS, chloroplastic [Cucurbita maxima][more]
XP_023534033.11.4e-14100.00protein PALE CRESS, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_022159473.11.4e-1468.35protein PALE CRESS, chloroplastic [Momordica charantia][more]
XP_022931090.11.4e-14100.00protein PALE CRESS, chloroplastic [Cucurbita moschata][more]
BLAST of Lsi05G009070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G48120.13.2e-1791.30pale cress protein (PAC) [more]
AT2G48120.23.2e-1791.30pale cress protein (PAC) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034563Protein PALE CRESSPANTHERPTHR37219PROTEIN PALE CRESS, CHLOROPLASTICcoord: 4..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G009070.1Lsi05G009070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0009658 chloroplast organization
biological_process GO:0048366 leaf development
cellular_component GO:0009507 chloroplast
cellular_component GO:0009536 plastid