Lsi05G009040 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G009040
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr05: 16212314 .. 16215719 (+)
RNA-Seq ExpressionLsi05G009040
SyntenyLsi05G009040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGAAATAGGAATCAAGAACAAGGACAACACAATTGCGCAAGATTCAACATCAGGGCACGATCACCATCTCCAGCAAGAAATCAATCCTAGTAAACTTTTTAAGAAATCAAGAAACAGAGTCTTCCAGCAATGATGAACTTCTTTGAAGATTTTCCAAGAATAGGCAACTAATAAGCATTAATCATGACCAAGAACATGAAAGCCAGCCACCATGATCTCCACATCGTCCTCTCCTCTCTTTCAACGGCTCAGAGTCGCCATCGCCACCTCTCTCTGGTTCAATGCCACTGCCGCTGTATTTCTTGCACCCGTGCCTCTGCAGCCTCCCTCTTAGAGGGTTTGCACTCATTTTCTACTCTCTCTTTGTTTCTGCATCAAGGGAGAAGAGAGCTTATGGTGGAAGTATGGTGGTCGCTATTGGGGGCAGCTATTCCAGCAGTAGTTGCAGAGCAAGCATACAAAATGAGGAGGCATTCTGAGGAACACAGAATAAAGACTGCTAGGGAAAGGGAGAAGAATTCGGATGACATTTTTGTCTGTGAGAGGGTCTGCACATCAAAGAGAATGTTGAAAAAGGTAGGGTCTTTCTCGAAAGACCCAATTCCTGATACTTGCGTGACTGTCCGTGGATTATCTGAACTTGATGCCTACACAGATGCATGCGCTCGCACTGTTTGTGTGAACCAGCATAAAGTACCAAACTGCAATGACGTTTGTCTTAGGAGATGCCAGAGTGAATGTCTTAAGCTTTCGGCTTCACATTCATCTTAGTGAAATGATATGATGAGTAAATAACGCAGTTTTTCTAGTATTGCATTTTGGATTGCGAACATTGGCCTAGAACTTTTGGCTTTCTGGAGATGATATGAAATGTTTTCTCAATTTACCCATGTTCCTCTTGTTAAAAGAACATGACAGCCAGCCACAAGACTACAAAATGAAGATTGACATGCCAACATTTAAGAAAAAGATTAATAGCCTTTCAAACAACAGAATACTAACTAACCCAACATTAGCAAGAACCAAGACTCCATCATACATGGTGATCTCTAAAAAGAAGTTTATATGGAGCACCCACCTAGATTTGATACCAAGAAGCAGAGTGATAAAGTTTGTAGTCTTAGAAAATCTTTGTAAGAAAATCTTTGTATGGTTTAAAACAGAGTCCACGTGCATGGTTTGATAAATTTGGTGAACCACTTCAAAATTTTGGTATGAAGAAGAATAAGTCTGATCACTTTATTTTCTACCAACGATCCAAGAGTGATATTACTTTACATGTTGTATATGTTGATGATATTGTTATCACAGGAAATGATAAGTTAGGTATATCTTCTCGTAAAACCTTCCTTTACTTCCCCAACTCAGAATCCACAAAGAACCTCATGACCCGATGAACATTTCATAACCAAATTTGAGCATCTCAATTGTTCGAATAAACCATGAGACAATAGAAGTTGACCCGCCTGATAACCTCAAGGCAGACTCTAATAGTAATAGGTGAATCTGTTTCATTTTGCTATTGTTGGGATAAAGAACAATCACATTGCTAGGACAAGGTTTTCAAAAGGAAGGTGCAACAAGAGCAAACCTAATAGATCAATCTAAGTAGTTCACCTTTTAAGAGCTACAAAACGAAAAGAAATGAATAAGAGAAAACCAAAGAGATGGAATTAACCGTTCTGCATGTGAGTTGGTTACAACACCAATAGTAGACTTGAGAGATGCTACCCAGATAAAGTAAGGGTAAAAGTTAACTGGTTAAGCTTGTCAATAGATTTAGAAGGAACAATAAATCTTTCAAATTAGTAGGACTGTGAGCTAAGAAGCACGGACACTTTAGTTTGGTTAGCGTGTCCGTGTCCGACACGTGTCGGACACTCCGACACTCAGATACTTATTGGACACGTATCGAACACTTGTTAGTGTAACAAATGTGTTAGACATGCATTGAACACTTGTTGAGTAGACTAAAAAGACACATATATGACAATAATAATAACTTTTTAGTGTGAACTTTAAGGTAAGTCTTTTAAGCATATAAATGCATCAACCCGTTTACTTTCAATTTTATATTGGTATGAAATGATATAAATTTTTAAAAAATGTATATTTTAATAAACATGTCATTGCCGTGTCGTGTCCTAGATATTTAAAATATGGAGTGTCGCCGTGTCCGTGTCCGTGTCGTTGTCGTGTCTCGTATCTGTATCCGTGCTTCTTAGATTGTGAGTATCATAGATCCAATTTCTATCTTAGACTATAAGCAGAAGAAGATTGAATGAAAAAAAAAAAAAAAAAAAAAACCAAATTTGTCCACATCAAGGTTTAAACATTATGAGACAAAATCTTTCAGACGGATATGAAAAGGGGTAGAGTCGCCAAGAAGGAAGAGGGCTAATAACAGGTCAATGAAAAATATATGGAGAGGAAAAACTGATTCTCATTGAATGATGAGAAAAAGCCTCTAATTATATCTATACAGTGCTAGAGTTAATTTAATTAAGAATAAATCTAACTCTAGTTACAAAATAAGAATTATAGGTAACAAACTAACTACAATCACTAAAATGTAAAAATAAAAACGCTAAAATACCTTTTGGAATATTGGATACTCAGCTTTGAATCTTGTACAGGCAAATTCCTGTGCCTCCTGGCTCGATCCAGGTTCCTGATTCAAAAATTGATTGCATGGAAAAGCCAAGATCTCAAGTCCTGGAAATCAGGGTATAGATACAGTTAACGAAGTAAAGAAGCTAATGGACCAAACTAAACCAAAGAGAAGATTATAGTATAGCCTTCAAGGAAACTCTAATAGTCCATCATTGCACAAAAGAAGAGGAGGAACCAATACCTGTAAGAAATAAAAATCTTGCTAACATGAAAATTAGGAAAATCAATAGAAGTAGAAGCAAGAAACGTAAAGACCTTTTTCTTTGTATTTGCTGTAAAGTTCCGTCAGCTGGGTATAATTTGAATCTGTGTAACCACTGCCCAAACAATTCAAAATTCTCTAGGAATTAGAACCCCATGAATTCGAGTAACCAAGAGGAACAAAGTTCAGAGGAAAAGAAGACGCACCATTTGGAAGCAACATTTACCACAAGAAGAACCTTTCCCCGGTAGATGCTAAGGTCCACGTCTTGTCCTCTGGCATCCTTCAACAAGCCAAGAGACTTAACTTCGTAAATTTCCGTTTTGAAGCGTCTTTGGGAGGAGAACAAGCCAAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGCCAGGAAAGCAGATGAGAATTTACCTTCACCACGAATTCATGAATGGACTTCTCAGAGACTGATTGAGAAGCACCCATTTTCTTCTCTCTCTTCTGTTCTTGTTCTTCTCAGGCAGGATATCCTGTTTATTGATGTTTTATAA

mRNA sequence

ATGCAAGAAATAGGAATCAAGAACAAGGACAACACAATTGCGCAAGATTCAACATCAGGGCACGATCACCATCTCCAGCAAGAAATCAATCCTACTATTCCAGCAGTAGTTGCAGAGCAAGCATACAAAATGAGGAGGCATTCTGAGGAACACAGAATAAAGACTGCTAGGGAAAGGGAGAAGAATTCGGATGACATTTTTGTCTGTGAGAGGGTCTGCACATCAAAGAGAATGTTGAAAAAGGTAGGGTCTTTCTCGAAAGACCCAATTCCTGATACTTGCGTGACTGTCCGTGGATTATCTGAACTTGATGCCTACACAGATGCATGCGCTCGCACTGTTTGTGTGAACCAGCATAAAGTACCAAACTGCAATGACGTTTGTCTTAGGAGATGCCAGAGTGAATGTCTTAAGCTTTCGGCTTCACATTCATCTTAGCAAATTCCTGTGCCTCCTGGCTCGATCCAGGTTCCTGATTCAAAAATTGATTGCATGGAAAAGCCAAGATCTCAAGTCCTGGAAATCAGGTCCATCATTGCACAAAAGAAGAGGAGGAACCAATACCTAGGAAAAGAAGACGCACCATTTGGAAGCAACATTTACCACAAGAAGAACCTTTCCCCGGTAGATGCTAAGGTCCACGTCTTGTCCTCTGGCATCCTTCAACAAGCCAAGAGACTTAACTTCGTAAATTTCCGTTTTGAAGCGTCTTTGGGAGGAGAACAAGCCAAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGCCAGGAAAGCAGATGAGAATTTACCTTCACCACGAATTCATGAATGGACTTCTCAGAGACTGATTGAGAAGCACCCATTTTCTTCTCTCTCTTCTGTTCTTGTTCTTCTCAGGCAGGATATCCTGTTTATTGATGTTTTATAA

Coding sequence (CDS)

ATGCAAGAAATAGGAATCAAGAACAAGGACAACACAATTGCGCAAGATTCAACATCAGGGCACGATCACCATCTCCAGCAAGAAATCAATCCTACTATTCCAGCAGTAGTTGCAGAGCAAGCATACAAAATGAGGAGGCATTCTGAGGAACACAGAATAAAGACTGCTAGGGAAAGGGAGAAGAATTCGGATGACATTTTTGTCTGTGAGAGGGTCTGCACATCAAAGAGAATGTTGAAAAAGGTAGGGTCTTTCTCGAAAGACCCAATTCCTGATACTTGCGTGACTGTCCGTGGATTATCTGAACTTGATGCCTACACAGATGCATGCGCTCGCACTGTTTGTGTGAACCAGCATAAAGTACCAAACTGCAATGACGTTTGTCTTAGGAGATGCCAGAGTGAATGTCTTAAGCTTTCGGCTTCACATTCATCTTAG

Protein sequence

MQEIGIKNKDNTIAQDSTSGHDHHLQQEINPTIPAVVAEQAYKMRRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS
Homology
[Close]
BLAST of Lsi05G009040 vs. ExPASy Swiss-Prot
Match: Q8L8Q8 (Uncharacterized protein At5g64816 OS=Arabidopsis thaliana OX=3702 GN=At5g64816 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.5e-45
Identity = 89/118 (75.42%), Postives = 105/118 (88.98%), Query Frame = 0 

Query: 29  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSK 88
           I   +PA++A QA+++ +RH EE RIK+AR REK+SD+IFVCERVCTSKRMLKKVG+FSK
Sbjct: 9   IGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRMLKKVGAFSK 68

Query: 89  DPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DPIPDTCVTV G+SELDA +DACARTVCVNQH+V N ND+CLRRCQSECLKLS+S SS
Sbjct: 69  DPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLKLSSSSSS 126

[Close]
BLAST of Lsi05G009040 vs. ExPASy TrEMBL
Match: A0A0A0KJ71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486990 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.6e-49
Identity = 104/118 (88.14%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 29  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSK 88
           +   IPAVVA Q YKM RRHSEE RIKTAR REKNSDDIFVCERVCTSKRMLKKVGSFSK
Sbjct: 9   LGAAIPAVVAGQVYKMKRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRMLKKVGSFSK 68

Query: 89  DPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN NDVCLRRCQSECLKLSAS+SS
Sbjct: 69  DPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKLSASYSS 126

[Close]
BLAST of Lsi05G009040 vs. ExPASy TrEMBL
Match: A0A6J1GFD3 (uncharacterized protein At5g64816 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453421 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.5e-48
Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 29  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSK 88
           +   IPAVVA QAY+M RRHSEE ++KTAR REKN DDIFVCERVCTSKRMLKKVGSFSK
Sbjct: 9   LGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRMLKKVGSFSK 68

Query: 89  DPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN ND+CLRRCQSECLKLSASHSS
Sbjct: 69  DPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQSECLKLSASHSS 126

[Close]
BLAST of Lsi05G009040 vs. ExPASy TrEMBL
Match: A0A6J1GEH5 (uncharacterized protein At5g64816 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453421 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.5e-48
Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 29  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSK 88
           +   IPAVVA QAY+M RRHSEE ++KTAR REKN DDIFVCERVCTSKRMLKKVGSFSK
Sbjct: 24  LGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRMLKKVGSFSK 83

Query: 89  DPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN ND+CLRRCQSECLKLSASHSS
Sbjct: 84  DPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQSECLKLSASHSS 141

[Close]
BLAST of Lsi05G009040 vs. ExPASy TrEMBL
Match: A0A6J1IRM4 (uncharacterized protein At5g64816-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478087 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.3e-48
Identity = 100/118 (84.75%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 29  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSK 88
           +   IPAVVA QAY+M RRHSEE +IKTAR REKN +DIFVCERVCTSKRMLKKVGSFSK
Sbjct: 9   LGAAIPAVVAGQAYRMRRRHSEEQKIKTARGREKNPEDIFVCERVCTSKRMLKKVGSFSK 68

Query: 89  DPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DPIPDTC+TV GLSELDA TDACARTVCVNQH+VPN ND+CLRRCQSECLKLSASHSS
Sbjct: 69  DPIPDTCMTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQSECLKLSASHSS 126

[Close]
BLAST of Lsi05G009040 vs. ExPASy TrEMBL
Match: A0A6J1IJU3 (uncharacterized protein At5g64816-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478087 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.3e-48
Identity = 100/118 (84.75%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 29  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSK 88
           +   IPAVVA QAY+M RRHSEE +IKTAR REKN +DIFVCERVCTSKRMLKKVGSFSK
Sbjct: 82  LGAAIPAVVAGQAYRMRRRHSEEQKIKTARGREKNPEDIFVCERVCTSKRMLKKVGSFSK 141

Query: 89  DPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DPIPDTC+TV GLSELDA TDACARTVCVNQH+VPN ND+CLRRCQSECLKLSASHSS
Sbjct: 142 DPIPDTCMTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQSECLKLSASHSS 199

[Close]
BLAST of Lsi05G009040 vs. NCBI nr
Match: XP_004141962.1 (uncharacterized protein At5g64816 [Cucumis sativus] >XP_031743170.1 uncharacterized protein At5g64816 [Cucumis sativus] >KGN48427.1 hypothetical protein Csa_003817 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-48
Identity = 104/118 (88.14%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 29  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSK 88
           +   IPAVVA Q YKM RRHSEE RIKTAR REKNSDDIFVCERVCTSKRMLKKVGSFSK
Sbjct: 9   LGAAIPAVVAGQVYKMKRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRMLKKVGSFSK 68

Query: 89  DPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN NDVCLRRCQSECLKLSAS+SS
Sbjct: 69  DPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKLSASYSS 126

[Close]
BLAST of Lsi05G009040 vs. NCBI nr
Match: XP_038881384.1 (uncharacterized protein At5g64816 [Benincasa hispida] >XP_038881385.1 uncharacterized protein At5g64816 [Benincasa hispida])

HSP 1 Score: 202.6 bits (514), Expect = 2.3e-48
Identity = 103/118 (87.29%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 29  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSK 88
           +   IPAVVA QAY+M RRHSEE RI+TAR REKNSDDIFVCERVCTSKRMLKKVGSFSK
Sbjct: 9   LGAAIPAVVAGQAYRMRRRHSEEQRIRTARGREKNSDDIFVCERVCTSKRMLKKVGSFSK 68

Query: 89  DPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN NDVCLRRCQSECLKLSA HSS
Sbjct: 69  DPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKLSAFHSS 126

[Close]
BLAST of Lsi05G009040 vs. NCBI nr
Match: XP_022950289.1 (uncharacterized protein At5g64816 isoform X2 [Cucurbita moschata] >XP_023544687.1 uncharacterized protein At5g64816 [Cucurbita pepo subsp. pepo] >KAG6604242.1 hypothetical protein SDJN03_04851, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202.2 bits (513), Expect = 3.0e-48
Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 29  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSK 88
           +   IPAVVA QAY+M RRHSEE ++KTAR REKN DDIFVCERVCTSKRMLKKVGSFSK
Sbjct: 9   LGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRMLKKVGSFSK 68

Query: 89  DPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN ND+CLRRCQSECLKLSASHSS
Sbjct: 69  DPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQSECLKLSASHSS 126

[Close]
BLAST of Lsi05G009040 vs. NCBI nr
Match: XP_022950288.1 (uncharacterized protein At5g64816 isoform X1 [Cucurbita moschata])

HSP 1 Score: 202.2 bits (513), Expect = 3.0e-48
Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 29  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSK 88
           +   IPAVVA QAY+M RRHSEE ++KTAR REKN DDIFVCERVCTSKRMLKKVGSFSK
Sbjct: 24  LGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRMLKKVGSFSK 83

Query: 89  DPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN ND+CLRRCQSECLKLSASHSS
Sbjct: 84  DPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQSECLKLSASHSS 141

[Close]
BLAST of Lsi05G009040 vs. NCBI nr
Match: KAG7034400.1 (hypothetical protein SDJN02_04128, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201.8 bits (512), Expect = 3.9e-48
Identity = 101/114 (88.60%), Postives = 106/114 (92.98%), Query Frame = 0 

Query: 33  IPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIP 92
           IPAVVA QAY+M RRHSEE ++KTAR REKN DDIFVCERVCTSKRMLKKVGSFSKDPIP
Sbjct: 68  IPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRMLKKVGSFSKDPIP 127

Query: 93  DTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DTCVTV GLSELDA TDACARTVCVNQH+VPN ND+CLRRCQSECLKLSASHSS
Sbjct: 128 DTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQSECLKLSASHSS 181

[Close]
BLAST of Lsi05G009040 vs. TAIR 10
Match: AT5G64816.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 181.8 bits (460), Expect = 3.9e-46
Identity = 89/118 (75.42%), Postives = 105/118 (88.98%), Query Frame = 0 

Query: 29  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSK 88
           I   +PA++A QA+++ +RH EE RIK+AR REK+SD+IFVCERVCTSKRMLKKVG+FSK
Sbjct: 9   IGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRMLKKVGAFSK 68

Query: 89  DPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DPIPDTCVTV G+SELDA +DACARTVCVNQH+V N ND+CLRRCQSECLKLS+S SS
Sbjct: 69  DPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLKLSSSSSS 126

[Close]
BLAST of Lsi05G009040 vs. TAIR 10
Match: AT5G64816.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 181.8 bits (460), Expect = 3.9e-46
Identity = 89/118 (75.42%), Postives = 105/118 (88.98%), Query Frame = 0 

Query: 29  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSK 88
           I   +PA++A QA+++ +RH EE RIK+AR REK+SD+IFVCERVCTSKRMLKKVG+FSK
Sbjct: 9   IGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRMLKKVGAFSK 68

Query: 89  DPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS 146
           DPIPDTCVTV G+SELDA +DACARTVCVNQH+V N ND+CLRRCQSECLKLS+S SS
Sbjct: 69  DPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLKLSSSSSS 126

The following BLAST results are available for this feature:
BLAST of Lsi05G009040 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L8Q85.5e-4575.42Uncharacterized protein At5g64816 OS=Arabidopsis thaliana OX=3702 GN=At5g64816 P... [more]
BLAST of Lsi05G009040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ716.6e-4988.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486990 PE=4 SV=1[more]
A0A6J1GFD31.5e-4885.59uncharacterized protein At5g64816 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1GEH51.5e-4885.59uncharacterized protein At5g64816 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1IRM47.3e-4884.75uncharacterized protein At5g64816-like isoform X2 OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1IJU37.3e-4884.75uncharacterized protein At5g64816-like isoform X1 OS=Cucurbita maxima OX=3661 GN... [more]
BLAST of Lsi05G009040 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141962.11.4e-4888.14uncharacterized protein At5g64816 [Cucumis sativus] >XP_031743170.1 uncharacteri... [more]
XP_038881384.12.3e-4887.29uncharacterized protein At5g64816 [Benincasa hispida] >XP_038881385.1 uncharacte... [more]
XP_022950289.13.0e-4885.59uncharacterized protein At5g64816 isoform X2 [Cucurbita moschata] >XP_023544687.... [more]
XP_022950288.13.0e-4885.59uncharacterized protein At5g64816 isoform X1 [Cucurbita moschata][more]
KAG7034400.13.9e-4888.60hypothetical protein SDJN02_04128, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Lsi05G009040 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G64816.13.9e-4675.42unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
AT5G64816.23.9e-4675.42unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR35548:SF3SUBFAMILY NOT NAMEDcoord: 31..143
IPR038934Uncharacterized protein At5g64816-likePANTHERPTHR35548EXPRESSED PROTEINcoord: 31..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G009040.1Lsi05G009040.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane