Lsi05G008740 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G008740
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpathogenesis-related protein 1-like
Locationchr05: 14815838 .. 14820609 (-)
RNA-Seq ExpressionLsi05G008740
SyntenyLsi05G008740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGATGCACACAATGATGTTTGTGCTCGTGCCCATGGTCAAGATAACCTTGTCTAAGTTGCCATTGAACCCATCCAACCCATCCAATGGGATGAGGAAGTGACAAACTTTGCTAGGCAATATGCTAATGAACGTAGTAATTATTGCCAATTGTTGCATTCTAGCAATAGGACTTATGGGGAGAATCTAACAATGCATCCTGCTGAAATGTCTGGCATCGAGGCAGTTGAAATGTGGGTAAATGAGCAACAATTCTACAATTATGACACCAATACATGCGCTGATCAAGAAATGTGTGGCCACTACACTCAAGTTGTGTGGAATAACTCAACAAAAGTTGGATGTGCAAAAGTGAGGTGCAGTAATGGCGGTACATTCATTACCTGCAACTATTACCCACCAGGGAATGTTGTTGGCGAGCGACCATATTAAAGGATCCTTCTCCTTCAATAATTAAAACAATAAATTCTAAAGACTATGACTTTGATATTATGTTTATGAGAGCATGTTCACTATTAATAAATAAAAATAATGCAGGATTGTTCCACTAATTGTGCTTTATCAAAGATTGTTATACATCCTATTGTTATCAATAAAATACTCAATAGTCTCAAATGTTTGTCATTCTTTTTTAACTTCAATCATAATATTTCAAAATTTCAATTTCAATATTATGTATGTATTGAATCATTCACATTTAAATTCTTATCATTTTTAAGAATTGGAAGAGATGAATTATGTGAGTCTAAGAGATCTATTTTTCTATGATGTTATTAGTATGATTGAATCTTTAATTGAGTCAATACCCATAACTAAGATATCAAATGAAGTTACACATGGATCGTGCCATATAAGAATGAGATTGTAGTTTTAGATTTTACAGACAAACTATGACTACATTAATGTAATTAAAACAATGTGTCGTATTTTCACTCAGTAATAAAATGTTGTTTGATATCAAAGCAATAATATTGTCAATTAAATTTAATGTTTTTCAGTAGTTTGGATTTTGATTGGGAACAATATAGAGCAGCATATGACAATAAACTTTTTTATGAAACTAATATAGAGAAATTAAAAAATAAAAGTTCTTTTAGATATGCTAAATAATATATTTAGTCTTATTGGAATATAAAATGGCAACAAAAGCTTTATACGTTTTTCAATATAATATAATCTAATATAATGTCTCACATTTTACTGTATTGTTCAAATTATTTAGAACAGTTGAAAATGCATGTAACTTCCCAAATTTCAGGTGAATTTAATTTTTTTATTATGTAAATTATTGGGTGTTGGTCCTTTTAATTTTAGTATTTAAATTCATTTTTGGTGTAAGTTGAAGGGAGTTAATATTTTTTGGGCTCATTGGACCTCTCGCCATGTTAGTTGTGGGGTGATTTTGGTCTAAGGTGGCTAAAACGGTGAACTTTGACTTGGTCAAAGTCTAAGTCAACTAGGGTTTAAAAAAAGAAAAAAGAAAAATCTAGCTTATAGGTCGTCGCCTGACCCCTGCATCCTCTTTTTCATTCGTGTGCAACCGTCCGAAGCCCCTTCGACGCCTCTTCATCTGTAGCCAACAACCAACCCACTACGTCGCCACTACGGCATCGCACCATCATCGCTGTCAATTGGTGGTGAGTGTGTCACCACCTACATCTCTCTTTATCTCCTTTTGTTTATCTTTCTCCGTCTCTTTTTTTAATATCTAGACAATGTCATGTATGCCTATTATTTAAGAAATAGTTGTCTAACATTAATGAAAGAAAAAATAGATAAAATAGCTAACAAAATAATAGTAATAAATACAACACTTTGAATTTTTTTGTTAGCTATAGCAAATATAATGTCTTAATAAATCATAAGTATGTATAGCCCCGTCACCTTATTATCATAGCCTATTAATTATACTTTTAGTTTTTAAAATCAACGATAAATTTACTATAAAAACTTATGATAAACTTTGGCAACCAATAAAATAGGCTAATATGAGTGTCCCTTTAGATTTTTCTCATATCGATTAATTGTAGATTTTTGAATTTTGAAAAATATATTTTTATTTAAATCTTAAAAGGCAAGGTTTTGAATTCAAAGGCTTTTTTTTTTTTTTTAGGATCCTGAATAGAACAAGATTCCTCCAAGATCCTCAAGGTTGAGGGTACATCAACAGGTTGCCTTGTTGAAGAGTGGGATAGAGTGGTGGTATAGAAGGGTAGGATGACGGAAAGAGTTACGGCTGAGATGGAGCTTCTGAATTTATCGGGGGAAGAGGAAAATACGTCAATTCCTCTAGATCCTTGGATTGCTCAGGAGATTAATGGTCATCTGGACCATTGTCTTATTGGAAAACTTCTTTCACCAAGAATTATCTTTAGAAACGCTTTCTTCAATGCGTGGAAGATGAATCATGGAATTAATATCTCGGTGATTGGGAGGAATATCTTTCTGTTTGTCTTTGAGAAACTTCTTGACAAGGAATGGGTTTTGAGCGCTAGTCCGTGGTTATTTGATAAACACCTTTTGATTTTAGAAGAACCGGGGATCGATAGGCAGCTATCCGATCTAAATTTTAACAAGGTTTCTTTCTGGATTCGGTTGCTGAATTTGCCTTTCGGGTACCAGAACAGAATGATGGCGAGGAAAATTGGTGAAGCAATTGGGGGTTTTATTGATGTTGATTGTGATCAGGAAGGTTTATGTTGGGGGGATTCGATGAGAATCAAGGTCCTTTTAGACATCTCGAAACCTTTACGTAGGGGTATTAAAGTGTTATCTTCAGATGGAACAGAGGAGAAATGGGTGGCGATTCGGTACGAAAGATTGCCGGATTTTTGCTATTCGTGTGGTCGCCTAGGTCATGTTACCAAGGATTGTAATTTTAATCCTCTAGACCCAGATACGGTTAGTGGCAGTTCTGGACAATTTGGCCCGTGGTTAAGGTTCCAAGGGGCTCCAAGATCTCCCAAGAAATCTCCTAAGCCCTCGAAAGATCCTGAGACAAGTAGAACGGCGGAAGAGGAAGCTGAAACGCAACCATCTAATCCAGAAATTAGGACAGGTAGAAATGGTTCCCAAGAGGAGCCAAAGAATCAAGGCCCTTTCAATCTTGATTTAAATAAAGTTCAAGATTTGGTGGACAATTTGGAATCTGATCTCGGTAGAACTCAATTTGCACCTGTTTCTACTCAACCTCTTCCTCATTTTGCTTCGGAGTCTATGTCTTCTGTAGGTCCATTTGATCTGACTCCTGGAACTTCGTGTAAAAATGTTCTGAATCTGGATATTCCTGATGGAGGACGTAGTTCGGTTGAAACAAAACTAAGGAAGACTACTAGGACTTGGAAGAAACGCGCAACGTCTGCTACATACTCTCCTCTAGGGGCTAGTCGCCCTTATCTGCCAAAGAGGAAGAAAGTTGATGATGGTTATGTTAAGCCTGGGGAGTGCAAACAACCAAGGGCAGTTTCATTAGAGACACTACTGATTGACGGGAATATTACGTTGGCAGAGGCTGCAAGTCAGCCCTGCCCTGAATTATGAAGATCGTTTGTTGGAATGCTCGGGGTTTGGGCAACTTCCGAGCATTCCGTTCTTTGTGTCATCTTGTCCGTACGTCTAATCCTAACATTTTGTTCGTTTCTGAAACTAAGGGAGGCCTGGAGCTTTGTAATAAAGTTAAGTTTCGTTGTAGATTTTCTGGTTGCTTACCAGTTAATAGTGTGGGTGCAAAAGGTGGTTTGTGTATATTCTGGAACAACTCAGTGGTCCTTGATATTAAATCGTACTCTCCTCACCATCTTGATACGTTGATTTCATGGAATAACAACCAATTGAGATTTTCTGGTGTGTATGGGTATCCTGAGATAGCTAGGAAGCATCTGACTTGGGAGTTGCTGAGCAGATTGAATCCTGGAAAGGATGTTCCGTGGTTGATAGGGGGGATCTTAATGAAATTCTCTATGATAGTGAAAAGTCTGGGGGTCATCCTCGTGCTGTTCAGGTCCTTGGCGCTTTCAAAGAAGCTCTGGATAATTGTTTACTGGTAGATTTAGGTTACAAAGGTTCCCATTTTACATGGTATGGTAAGAGAAATGGGAATATGATTTGGGAGAGATTGGATAGGTTTCTTGGTAATGAGGCGTTTTGGAATTTATTTAATTAGGCTCATGTTAGTCATCTTGGGTGGCTTTTTTCAGATCATCGTCCTATTATGATATCCCTAGAGTATAATAAGTTCAGGAAAAATAGGGGGACGAAATCCTTTAAATTTGAAGAAGTTTGGATGCTAGATGCTGACTGTAAGAATGTTATCTCTGAAGGAGGTTACTGGAATAACCCTTGTTCAGAGGTCCCTGTTGATGAAAGCCTTAGGAGTTGCTCTAGAGCCCTTTCCCGCTAGGGGAAAGGAAATGTTAATGAGTGTAAGGTTAAAATTGCGAATTGTAAGAGAGTTCTTCAGGCAGCTTATGATAGCCCTTCGGTTACTAATTTCGATCATATCCATGAGATTGAATTTGAGCTTGCAGGCTTCTGGAAAAAGAGGAAATATATTAGAAGCAGAGGTCTAGGGAAGATTGGCTTAGATGGGGGGATAAAAACAGTAAATGGTTTCATAAGAAGACTACTCTAAGAAGGAAAAAGAATGAGATATCTGGCATTCTTAATGAGCTCAATGTATGGACAGAGGACGATAAAGAAATTCATAATACATTTCTCAATTATTTCCAAGATCTTTTTACATCTTCAGAGGCTTATGATTCACAAATATAG

mRNA sequence

ATGTCGATGCACACAATGATGTTTGTGCTCGTGCCCATGGTCAAGATAACCTTGTCTAAGTTGCCATTGAACCCATCCAACCCATCCAATGGGATGAGGAACAATAGGACTTATGGGGAGAATCTAACAATGCATCCTGCTGAAATGTCTGGCATCGAGGCAGTTGAAATGTGGGTAAATGAGCAACAATTCTACAATTATGACACCAATACATGCGCTGATCAAGAAATGTGTGGCCACTACACTCAAGTTGTGTGGAATAACTCAACAAAAGTTGGATGTGCAAAAGTGAGCCCCTTCGACGCCTCTTCATCTGTAGCCAACAACCAACCCACTACGTCGCCACTACGGCATCGCACCATCATCGCTGTCAATTGGTGGTTCCAAGGGGCTCCAAGATCTCCCAAGAAATCTCCTAAGCCCTCGAAAGATCCTGAGACAAGTAGAACGGCGGAAGAGGAAGCTGAAACGCAACCATCTAATCCAGAAATTAGGACAGGTAGAAATGGTTCCCAAGAGGAGCCAAAGAATCAAGGCCCTTTCAATCTTGATTTAAATAAAGTTCAAGATTTGGTGGACAATTTGGAATCTGATCTCGGTAGAACTCAATTTGCACCTGTTTCTACTCAACCTCTTCCTCATTTTGCTTCGGAGTCTATGTCTTCTGTAGGTCCATTTGATCTGACTCCTGGAACTTCGTGTAAAAATGTTCTGAATCTGGATATTCCTGATGGAGGACGTAGTTCGGTTGAAACAAAACTAAGGAAGACTACTAGGACTTGGAAGAAACGCGCAACGTCTGCTACATACTCTCCTCTAGGGGCTAGTCGCCCTTATCTGCCAAAGAGGAAGAAAGTTGATGATGAGGACGATAAAGAAATTCATAATACATTTCTCAATTATTTCCAAGATCTTTTTACATCTTCAGAGGCTTATGATTCACAAATATAG

Coding sequence (CDS)

ATGTCGATGCACACAATGATGTTTGTGCTCGTGCCCATGGTCAAGATAACCTTGTCTAAGTTGCCATTGAACCCATCCAACCCATCCAATGGGATGAGGAACAATAGGACTTATGGGGAGAATCTAACAATGCATCCTGCTGAAATGTCTGGCATCGAGGCAGTTGAAATGTGGGTAAATGAGCAACAATTCTACAATTATGACACCAATACATGCGCTGATCAAGAAATGTGTGGCCACTACACTCAAGTTGTGTGGAATAACTCAACAAAAGTTGGATGTGCAAAAGTGAGCCCCTTCGACGCCTCTTCATCTGTAGCCAACAACCAACCCACTACGTCGCCACTACGGCATCGCACCATCATCGCTGTCAATTGGTGGTTCCAAGGGGCTCCAAGATCTCCCAAGAAATCTCCTAAGCCCTCGAAAGATCCTGAGACAAGTAGAACGGCGGAAGAGGAAGCTGAAACGCAACCATCTAATCCAGAAATTAGGACAGGTAGAAATGGTTCCCAAGAGGAGCCAAAGAATCAAGGCCCTTTCAATCTTGATTTAAATAAAGTTCAAGATTTGGTGGACAATTTGGAATCTGATCTCGGTAGAACTCAATTTGCACCTGTTTCTACTCAACCTCTTCCTCATTTTGCTTCGGAGTCTATGTCTTCTGTAGGTCCATTTGATCTGACTCCTGGAACTTCGTGTAAAAATGTTCTGAATCTGGATATTCCTGATGGAGGACGTAGTTCGGTTGAAACAAAACTAAGGAAGACTACTAGGACTTGGAAGAAACGCGCAACGTCTGCTACATACTCTCCTCTAGGGGCTAGTCGCCCTTATCTGCCAAAGAGGAAGAAAGTTGATGATGAGGACGATAAAGAAATTCATAATACATTTCTCAATTATTTCCAAGATCTTTTTACATCTTCAGAGGCTTATGATTCACAAATATAG

Protein sequence

MSMHTMMFVLVPMVKITLSKLPLNPSNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCAKVSPFDASSSVANNQPTTSPLRHRTIIAVNWWFQGAPRSPKKSPKPSKDPETSRTAEEEAETQPSNPEIRTGRNGSQEEPKNQGPFNLDLNKVQDLVDNLESDLGRTQFAPVSTQPLPHFASESMSSVGPFDLTPGTSCKNVLNLDIPDGGRSSVETKLRKTTRTWKKRATSATYSPLGASRPYLPKRKKVDDEDDKEIHNTFLNYFQDLFTSSEAYDSQI
Homology
[Close]
BLAST of Lsi05G008740 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 9.0e-16
Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 0 

Query: 30  NGMRNNRTYGENLTMHPAE-MSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNN 89
           N + ++  YGENL     + M+  +AVEMWV+E+Q+Y++D+NTCA  ++CGHYTQVVW N
Sbjct: 75  NLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRN 134

Query: 90  STKVGCAKV 98
           S +VGCA+V
Sbjct: 135 SVRVGCARV 143

[Close]
BLAST of Lsi05G008740 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 0 

Query: 30  NGMRNNRTYGENLTMHPAE-MSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNN 89
           N + ++  YGENL     + M+  +AVEMWV+E+Q+Y++D+NTCA  ++CGHYTQVVW N
Sbjct: 75  NLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRN 134

Query: 90  STKVGCAKV 98
           S +VGCA+V
Sbjct: 135 SVRVGCARV 143

[Close]
BLAST of Lsi05G008740 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 0 

Query: 30  NGMRNNRTYGENLTMHPAE-MSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNN 89
           N + ++  YGENL     + ++  +AVEMWVNE+Q+Y +D+NTCA  ++CGHYTQVVW N
Sbjct: 75  NLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRN 134

Query: 90  STKVGCAKV 98
           S +VGCA+V
Sbjct: 135 SVRVGCARV 143

[Close]
BLAST of Lsi05G008740 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-15
Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 0 

Query: 38  YGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCAKV 97
           YGENL     ++SG+ AV +WVNE+  YNYDTNTC    +CGHYTQVVW NS ++GCAKV
Sbjct: 79  YGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKV 138

Query: 98  ----------SPFDASSSVANNQP 112
                       +D   + AN +P
Sbjct: 139 RCNNGGTIISCNYDPPGNYANQKP 160

[Close]
BLAST of Lsi05G008740 vs. ExPASy Swiss-Prot
Match: Q41359 (Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0 

Query: 38  YGENLTMHPA-EMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCAK 97
           YGENL      E++G  AV+MWV E+  YN +TNTCA  ++CGHYTQVVW NS ++GCA+
Sbjct: 82  YGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNSVRIGCAR 141

[Close]
BLAST of Lsi05G008740 vs. ExPASy TrEMBL
Match: A0A6J1I6X6 (pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470559 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-21
Identity = 49/72 (68.06%), Postives = 60/72 (83.33%), Query Frame = 0 

Query: 26  SNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVV 85
           SN    + +N  YGENL MHP+EM+GIEAV+MWV+EQQFY+Y +NTC + +MCGHYTQVV
Sbjct: 68  SNDCQLLHSNGPYGENLAMHPSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVV 127

Query: 86  WNNSTKVGCAKV 98
           W N+TKVGCAKV
Sbjct: 128 WQNTTKVGCAKV 139

[Close]
BLAST of Lsi05G008740 vs. ExPASy TrEMBL
Match: A0A6J1I350 (pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470565 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.7e-21
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 0 

Query: 26  SNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVV 85
           SN    + +N  YGENL MHP+EM+GIEAV+MWV+EQQFY+Y +NTC + +MC HYTQVV
Sbjct: 92  SNDCQLLHSNGPYGENLAMHPSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCSHYTQVV 151

Query: 86  WNNSTKVGCAKV 98
           W N+TKVGCAKV
Sbjct: 152 WQNTTKVGCAKV 163

[Close]
BLAST of Lsi05G008740 vs. ExPASy TrEMBL
Match: A0A6J1GL40 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455249 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.2e-20
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 0 

Query: 26  SNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVV 85
           SN    + +N  YGENL MH +EM+GIEAV+MWV+EQQFY+Y +NTC + +MCGHYTQVV
Sbjct: 70  SNDCQLLHSNGPYGENLAMHSSEMTGIEAVQMWVDEQQFYDYASNTCIEGKMCGHYTQVV 129

Query: 86  WNNSTKVGCAKV 98
           W N+TKVGCAKV
Sbjct: 130 WQNTTKVGCAKV 141

[Close]
BLAST of Lsi05G008740 vs. ExPASy TrEMBL
Match: A0A6J1GMA0 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455250 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.8e-20
Identity = 47/72 (65.28%), Postives = 59/72 (81.94%), Query Frame = 0 

Query: 26  SNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVV 85
           SN    + +N  YGENL +H +EM+GIEAV+MWV+EQQFY+Y +NTC + +MCGHYTQVV
Sbjct: 70  SNDCQLLHSNGPYGENLAVHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVV 129

Query: 86  WNNSTKVGCAKV 98
           W N+TKVGCAKV
Sbjct: 130 WQNTTKVGCAKV 141

[Close]
BLAST of Lsi05G008740 vs. ExPASy TrEMBL
Match: A0A6J1GJF8 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454909 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.8e-20
Identity = 47/72 (65.28%), Postives = 59/72 (81.94%), Query Frame = 0 

Query: 26  SNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVV 85
           SN    + +N  YGENL +H +EM+GIEAV+MWV+EQQFY+Y +NTC + +MCGHYTQVV
Sbjct: 70  SNDCQLLHSNGPYGENLAVHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVV 129

Query: 86  WNNSTKVGCAKV 98
           W N+TKVGCAKV
Sbjct: 130 WQNTTKVGCAKV 141

[Close]
BLAST of Lsi05G008740 vs. NCBI nr
Match: XP_038888432.1 (pathogenesis-related protein 1-like [Benincasa hispida] >XP_038888746.1 pathogenesis-related protein 1-like [Benincasa hispida])

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-21
Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 0 

Query: 34  NNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVG 93
           N+ TYGENL M   EMSGI+AVEMWVNE+QFY+YD+NTC + +MCGHYTQVVWNNSTKVG
Sbjct: 87  NSGTYGENLAMSFGEMSGIQAVEMWVNEKQFYDYDSNTCVEDKMCGHYTQVVWNNSTKVG 146

Query: 94  CAKV 98
           CAKV
Sbjct: 147 CAKV 150

[Close]
BLAST of Lsi05G008740 vs. NCBI nr
Match: XP_022971865.1 (pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 113.2 bits (282), Expect = 4.0e-21
Identity = 49/72 (68.06%), Postives = 60/72 (83.33%), Query Frame = 0 

Query: 26  SNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVV 85
           SN    + +N  YGENL MHP+EM+GIEAV+MWV+EQQFY+Y +NTC + +MCGHYTQVV
Sbjct: 68  SNDCQLLHSNGPYGENLAMHPSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVV 127

Query: 86  WNNSTKVGCAKV 98
           W N+TKVGCAKV
Sbjct: 128 WQNTTKVGCAKV 139

[Close]
BLAST of Lsi05G008740 vs. NCBI nr
Match: XP_022971872.1 (pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-20
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 0 

Query: 26  SNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVV 85
           SN    + +N  YGENL MHP+EM+GIEAV+MWV+EQQFY+Y +NTC + +MC HYTQVV
Sbjct: 92  SNDCQLLHSNGPYGENLAMHPSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCSHYTQVV 151

Query: 86  WNNSTKVGCAKV 98
           W N+TKVGCAKV
Sbjct: 152 WQNTTKVGCAKV 163

[Close]
BLAST of Lsi05G008740 vs. NCBI nr
Match: XP_023511483.1 (pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 110.2 bits (274), Expect = 3.4e-20
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 0 

Query: 26  SNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVV 85
           SN    + +N  YGENL MH +EM+GIEAV+MWV+EQQFY+Y +NTC + +MCGHYTQVV
Sbjct: 74  SNECQLLHSNGPYGENLAMHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVV 133

Query: 86  WNNSTKVGCAKV 98
           W N+TKVGCAKV
Sbjct: 134 WQNTTKVGCAKV 145

[Close]
BLAST of Lsi05G008740 vs. NCBI nr
Match: XP_023511466.1 (pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 110.2 bits (274), Expect = 3.4e-20
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 0 

Query: 26  SNPSNGMRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVV 85
           SN    + +N  YGENL MH +EM+GIEAV+MWV+EQQFY+Y +NTC + +MCGHYTQVV
Sbjct: 70  SNDCQLLHSNGPYGENLAMHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGKMCGHYTQVV 129

Query: 86  WNNSTKVGCAKV 98
           W N+TKVGCAKV
Sbjct: 130 WQNTTKVGCAKV 141

[Close]
BLAST of Lsi05G008740 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.2e-17
Identity = 36/61 (59.02%), Postives = 47/61 (77.05%), Query Frame = 0 

Query: 37  TYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCAK 96
           +YGEN+      M+G+ AV+MWV+EQ  Y+YD+NTCA  + CGHYTQVVW NS ++GCAK
Sbjct: 78  SYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAK 137

Query: 97  V 98
           V
Sbjct: 138 V 138

[Close]
BLAST of Lsi05G008740 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-16
Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 0 

Query: 38  YGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCAKV 97
           YGENL     ++SG+ AV +WVNE+  YNYDTNTC    +CGHYTQVVW NS ++GCAKV
Sbjct: 79  YGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKV 138

Query: 98  ----------SPFDASSSVANNQP 112
                       +D   + AN +P
Sbjct: 139 RCNNGGTIISCNYDPPGNYANQKP 160

[Close]
BLAST of Lsi05G008740 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-16
Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = 0 

Query: 32  MRNNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQE--MCGHYTQVVWNNS 91
           + +N  +GEN+ M   EMS  +A EMW+NE+Q+Y+YD+NTC D     C HYTQVVW N+
Sbjct: 69  VHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNT 128

Query: 92  TKVGCAKV 98
            ++GCAKV
Sbjct: 129 VRLGCAKV 136

[Close]
BLAST of Lsi05G008740 vs. TAIR 10
Match: AT5G26130.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 5.4e-16
Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 0 

Query: 34  NNRTYGENLTMHPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVG 93
           +N  YGENL      +SG EAV++WVNE+  Y Y +NTC+D + CGHYTQVVW  S  VG
Sbjct: 78  SNGLYGENLAWSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQVVWRTSEWVG 137

Query: 94  CAKVSPFDASSSVANN 110
           CAKV   +  + V  N
Sbjct: 138 CAKVKCDNGGTFVTCN 153

[Close]
BLAST of Lsi05G008740 vs. TAIR 10
Match: AT1G50050.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 7.1e-16
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 0 

Query: 37  TYGENLTM-HPAEMSGIEAVEMWVNEQQFYNYDTNTCADQEMCGHYTQVVWNNSTKVGCA 96
           +YGENL   + A  +G+ AV +WVNE+ +YNY  N C   + C HYTQVVW+NS K+GCA
Sbjct: 76  SYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQVVWSNSVKIGCA 135

Query: 97  KVSPFDASSSVANNQPTTSPLRHRTIIA 124
           +V   +    V  N   ++ L+ R I A
Sbjct: 136 RVLCNNGGYFVGCNYDASAALKSRKITA 163

The following BLAST results are available for this feature:
BLAST of Lsi05G008740 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P070539.0e-1653.62Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P082991.5e-1553.62Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1[more]
P090421.5e-1553.62Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3[more]
Q9ZNS41.5e-1548.81Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1[more]
Q413591.1e-1357.38Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1[more]
BLAST of Lsi05G008740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I6X61.9e-2168.06pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470559 ... [more]
A0A6J1I3509.7e-2166.67pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470565 ... [more]
A0A6J1GL402.2e-2066.67pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145524... [more]
A0A6J1GMA04.8e-2065.28pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145525... [more]
A0A6J1GJF84.8e-2065.28pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145490... [more]
BLAST of Lsi05G008740 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038888432.11.8e-2178.13pathogenesis-related protein 1-like [Benincasa hispida] >XP_038888746.1 pathogen... [more]
XP_022971865.14.0e-2168.06pathogenesis-related protein 1-like [Cucurbita maxima][more]
XP_022971872.12.0e-2066.67pathogenesis-related protein 1-like [Cucurbita maxima][more]
XP_023511483.13.4e-2066.67pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_023511466.13.4e-2066.67pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo][more]
BLAST of Lsi05G008740 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G33720.12.2e-1759.02CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT2G14580.11.1e-1648.81basic pathogenesis-related protein 1 [more]
AT3G19690.11.9e-1652.94CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT5G26130.15.4e-1651.32CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT1G50050.17.1e-1644.32CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein-relatedPRINTSPR00837V5TPXLIKEcoord: 78..94
score: 62.72
coord: 54..67
score: 42.03
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 35..102
IPR014044CAP domainSMARTSM00198SCP_3coord: 10..134
e-value: 1.2E-8
score: 32.8
IPR014044CAP domainPFAMPF00188CAPcoord: 38..97
e-value: 3.1E-11
score: 44.2
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 12..163
e-value: 1.2E-20
score: 76.2
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 20..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..159
NoneNo IPR availablePANTHERPTHR10334:SF488PATHOGENESIS-RELATED PROTEIN 1coord: 35..102
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 79..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G008740.1Lsi05G008740.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009607 response to biotic stimulus
cellular_component GO:0005615 extracellular space
cellular_component GO:0005576 extracellular region