Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGCAAATGGCAAAAATCTTAGATTTGCTCGCTGCACAAAAAGGAAAAGCAGTGGCGGAGACTTCAGGTCCTCATAACGGTATTTCTGAGGTAGAAGATACATCAATATACCCTCCAGGATTCACACCACACGTATCACAACACCACGACGTATCGGTAGCACCTCCGCAACCAATCTTTTACACTCACGCAATGCCTACGGTACCGTTGGAAGTAGGGATAGCCCAAAACCCTGCCATTCCAATGCCCGGACAAGTTCAACCTTCGGTACAACTAAGGAGTCAGAAGAGCAATCCAAGTTATGTTTACGAGTATGATAATGACAGAGGAGAGGCAGAAAGAAGTGAATCAAGGGGAAAGTTGGATATTTTAGAGGAAATATTACGGCCCATTGAAGGAGCCAATGCATTTGGAAGCATAGATGCAACACAACTATGTTTAATCTCTAATGTTGTTATTCCTCCCAAATTGAAAATACCTGATTTTGAAAAATATGATGGAACATTCTGTCCAAGAAACCACCTAATTATGTATTGCAGAAAAATGGCCGCACACATTCAGGAAGAAAAACTCTTAATACATGGTTTTCAAGATAGTTTGACAGGCTCTAGTTCTCATTGGTACATGCAGCTAGATGCAACATACGTCAGAAAATGGAAGGATTTGGCGGATTTATTCCTTAAACAGTACAAACACAACTTAGATATGGCTCCAGTCGTTTAGATTTACAACGACTAGAGAATAAGAGTACTAAGAATTTCAAGGAATATGCACAAAGATGGAGGGAAATGGCTGCTCGAATTCAACCACCCTTGACAGATAAAGAAATGACAACTATGTTCATAAACACTCTCCGATCTCCCTATTATGATCGCATGATAGGAAATGCCTCTACAAATTTTTCAGACATTATTACCATCGAAGAAAGAATTGAGTATGGGGTGAAATATGGAAGAATTGTGGACACTATGTCAGAATCAAACCTGAAAAAAAGTATCATTCCAAAGAAAAAGGAAGGTAAAATCCACGAGGTCAGTTACAGTCAGAGAATGCCTTTAAGCAATTTAAAGGCAATACATTACCCAGTATCGAACAATGCATTTCAAACCCCCTATAATAATTCTTATGCAATCGGCCAAGGTCATCAAATGGTGCAGGGGCAAAGGAATTATTCTTCAGAGATCCAGAACCTCAACTCATCGAATGTTCAACGATTCGTTAGGAACAATTCCAGAAATTATGATCCCATTCCTGTGACTTACACTGAACTCCTTCCTCAACTTATCCAGAATAAACAACTTGTCTCGATACATATGGAACCTGTACTACCACCATATCCAAAATGGTATAAACCAAACGCACGTTGTGACTATCATTCGGGAGCGGTTGGGCATTCTACTGAAAATTGTTACACTCTCAAAGGAAAGGTACAAGATTTGATAAATTCGGGGTGGCTTAAATTCAAAAAAGCAGAAGAAGTACCAGATATCACCCAAAATCCACTACCTGATCATGGAAACCCTACAATAAACGCCATCCATATTCAATCCGAATGCGAGGGAGATGTCGATGTAGTGTACCAGTACTCAAAAGACAATTGTCTATCTTATAGTGAAATGTCGATTTGCTTGAACGAAACGGATATTTCATTCGATAAATGTGATTTCGGAAGGAGAGGCACCATCTAAAGTTCGATCAAGATAGAACCATTGGTGATCTTTTTCAAGGAACAACCTTCGAGTGTCCAAACCAGCTTGGCCATCTCCAAGCCTCTGACCATTCAAATTCCCAGTTCTTACAAATATAGGGATAACAAAGCAGTTCTATGGAATTACGGTGGTTAAGTCTTTGGCAAAGAAGCTACTACGGTGACTAACATTTCTGGGATCAGCGGAATGACTAGGAGCGGGAGATGCTATAAGCCAGATGCCTTAAAAGTATCACAAGAATCTAGACTGGACAAGGGGAAGGGAAAGGAGCACTTAACAGAGGATTTTGAAGAATTTTGGAATGAAGAGCCCATTACAACTAAAGGAACTTCCTCTAGGAAAGTGGTGTCTGACGAAGAAGCTTTCGAATTCCTGAAGTCGATCAAACATAGCAATTATAAAGTGATTGACCAGTTACATCGTACATCAGCCCGTATATCCATACTGTCGTTATTTCTTAATTCAGAGCCGCATCGAAAAACTTTGTTGGATGTCCTGAACAAGGCACATGTGAACCATGATATTATAGTCGAGAAATTAAGTGGAATTGTGGGGAATATTACTTCTTCTAATACAATTACATTCACGGATGAAGAAATTCCATCTGAAGGAATCGGTCACAATAAGGCATTACATATAGTGGTGAAATGCAAGGATCATGCAATAGCAAAGGTTCTCGTCGATAATGGATCGTCCTTAAATGTGATGCCAATGTCTACACTACTAAAGCTACCAGTAGACCCATCTCACATAAAGCATAACAATATGGTGGTAAGAGCTTTTGATGGAACTCGTAGAGGAGTTGTGGGTGATATCGAATTACCCATTAAGATTGGACCTCGAATTTTCAATGTGACATTTCAAGTAATGGACATAAGCCCCAGCCTATAGTTGTTTGTTAGGTAGACCCTGGATCCATTCAACAGGCGTCATTCCCTCAACTTTGCATCAGCGGTTAAAATTTATTTGTGAAAATACGTTGGCATGTGTGTTCGGTCAAGAGGATGTAATGGTTACCAAAACTACTAATATCCCTTATGTAGAGGCGGCAGAGGAAGCATTAGAATATTCTTTTCGATCATTCGAAATTGCTAACGCTACAATTTTCACTCATGCAGAAGATCGACAATCCTTACCAAGAGCCTCAGTGATGATTGCTAAAACCCTAATCAGAGGAGATTTCAAACCTGGGAAAGGTTTGGGAAAGTATCAACAAGGGAGAATTCAACCTGTAATTTTACCTAGGCTGGTTGAGAGGTTTGGTTTAGGATACAAACCAACTACTGATGATTGGAAGAGTATTCAGGAACGGAAAAGATTGCATAGGGTTGCCAAACTGGAAGATCAGGAAGTCAATGCCAACAAATTAATAATTCCACATATTTACGAGACCTTTAGAAAGGATGAAGCTGAAATAGATAGTCTAATAATGGAGATGTCAGACCTTCCAATTGCTGCTATTATCGAGAAGTATAAAGAACATGAAATGGATTCTTTAGTATACCCATGCCCTCCAAATTTTGAACTAAATAACTGGGAGGTCATCGAGCTGCCTGTCCTTTCCAAAGAAATTGAAGAGTAATCTATTCATCTTTATTTTTGCATTTGTTTCCTGTTAGTTAGGAGTCTCTCATTAGTTATGCCTAAGACTATGGGAAGTTTTCATTTTTGTACTCGGGCGTCCTATTTTGCATTCTTAATAAAAAAATATTTAGTAATTTCTTATTTCATAGTTCTTCTGTTCGCTCTCTCCTTCTCTCTCCTCTCTGACTATGTGAAATGATCCAGGATTTATAGCAATGAATTTGAAAACAAAAAAGATAGTAATTTTGAAACTGAGCTCAATGACCCGATCATAAGCAACGAACCAGAAGAAATTGACGACAATGAGGAGGATATATCGCCTGAACTTCTACGTTTAGTACAGGAGGAGGAAAGATTTGCTTTGCCATATCAAGAA
mRNA sequence
GAGCAAATGGCAAAAATCTTAGATTTGCTCGCTGCACAAAAAGGAAAAGCAGTGGCGGAGACTTCAGGTCCTCATAACGGTATTTCTGAGGTAGAAGATACATCAATATACCCTCCAGGATTCACACCACACGTATCACAACACCACGACGTATCGGTAGCACCTCCGCAACCAATCTTTTACACTCACGCAATGCCTACGGTACCGTTGGAAGTAGGGATAGCCCAAAACCCTGCCATTCCAATGCCCGGACAAGTTCAACCTTCGGTACAACTAAGGAGTCAGAAGAGCAATCCAAGTTATGTTTACGAGTATGATAATGACAGAGGAGAGGCAGAAAGAAGTGAATCAAGGGGAAAGTTGGATATTTTAGAGGAAATATTACGGCCCATTGAAGGAGCCAATGCATTTGGAAGCATAGATGCAACACAACTATGTTTAATCTCTAATGAACAACCTTCGAGTGTCCAAACCAGCTTGGCCATCTCCAAGCCTCTGACCATTCAAATTCCCAGTTCTTACAAATATAGGGATAACAAAGCAGTTCTATGGAATTACGTCTTTGGCAAAGAAGCTACTACGGTGACTAACATTTCTGGGATCAGCGGAATGACTAGGAGCGGGAGATGCTATAAGCCAGATGCCTTAAAAGTATCACAAGAATCTAGACTGGACAAGGGGAAGGGAAAGGAGCACTTAACAGAGGATTTTGAAGAATTTTGGAATGAAGAGCCCATTACAACTAAAGGAACTTCCTCTAGGAAAGTGGTGTCTGACGAAGAAGCTTTCGAATTCCTGAAGTCGATCAAACATAGCAATTATAAAGTGATTGACCAGTTACATCGTACATCAGCCCGTATATCCATACTGTCGTTATTTCTTAATTCAGAGCCGCATCGAAAAACTTTGTTGGATGTCCTGAACAAGGCACATGTGAACCATGATATTATAGTCGAGAAATTAAAGGCGGCAGAGGAAGCATTAGAATATTCTTTTCGATCATTCGAAATTGCTAACGCTACAATTTTCACTCATGCAGAAGATCGACAATCCTTACCAAGAGCCTCAGTGATGATTGCTAAAACCCTAATCAGAGGAGATTTCAAACCTGGGAAAGGTTTGGGAAAGTATCAACAAGGGAGAATTCAACCTGTAATTTTACCTAGGCTGGTTGAGAGGTTTGGTTTAGGATACAAACCAACTACTGATGATTGGAAGAGTATTCAGGAACGGAAAAGATTGCATAGGGTTGCCAAACTGGAAGATCAGGAAGTCAATGCCAACAAATTAATAATTCCACATATTTACGAGACCTTTAGAAAGGATGAAGCTGAAATAGATAGTCTAATAATGGAGATGTCAGACCTTCCAATTGCTGCTATTATCGAGAAGTATAAAGAACATGAAATGGATTCTTTAGTATACCCATGCCCTCCAAATTTTGAACTAAATAACTGGGAGGTCATCGAGCTGCCTGTCCTTTCCAAAGAAATTGAAGAGATTTATAGCAATGAATTTGAAAACAAAAAAGATAGTAATTTTGAAACTGAGCTCAATGACCCGATCATAAGCAACGAACCAGAAGAAATTGACGACAATGAGGAGGATATATCGCCTGAACTTCTACGTTTAGTACAGGAGGAGGAAAGATTTGCTTTGCCATATCAAGAA
Coding sequence (CDS)
GAGCAAATGGCAAAAATCTTAGATTTGCTCGCTGCACAAAAAGGAAAAGCAGTGGCGGAGACTTCAGGTCCTCATAACGGTATTTCTGAGGTAGAAGATACATCAATATACCCTCCAGGATTCACACCACACGTATCACAACACCACGACGTATCGGTAGCACCTCCGCAACCAATCTTTTACACTCACGCAATGCCTACGGTACCGTTGGAAGTAGGGATAGCCCAAAACCCTGCCATTCCAATGCCCGGACAAGTTCAACCTTCGGTACAACTAAGGAGTCAGAAGAGCAATCCAAGTTATGTTTACGAGTATGATAATGACAGAGGAGAGGCAGAAAGAAGTGAATCAAGGGGAAAGTTGGATATTTTAGAGGAAATATTACGGCCCATTGAAGGAGCCAATGCATTTGGAAGCATAGATGCAACACAACTATGTTTAATCTCTAATGAACAACCTTCGAGTGTCCAAACCAGCTTGGCCATCTCCAAGCCTCTGACCATTCAAATTCCCAGTTCTTACAAATATAGGGATAACAAAGCAGTTCTATGGAATTACGTCTTTGGCAAAGAAGCTACTACGGTGACTAACATTTCTGGGATCAGCGGAATGACTAGGAGCGGGAGATGCTATAAGCCAGATGCCTTAAAAGTATCACAAGAATCTAGACTGGACAAGGGGAAGGGAAAGGAGCACTTAACAGAGGATTTTGAAGAATTTTGGAATGAAGAGCCCATTACAACTAAAGGAACTTCCTCTAGGAAAGTGGTGTCTGACGAAGAAGCTTTCGAATTCCTGAAGTCGATCAAACATAGCAATTATAAAGTGATTGACCAGTTACATCGTACATCAGCCCGTATATCCATACTGTCGTTATTTCTTAATTCAGAGCCGCATCGAAAAACTTTGTTGGATGTCCTGAACAAGGCACATGTGAACCATGATATTATAGTCGAGAAATTAAAGGCGGCAGAGGAAGCATTAGAATATTCTTTTCGATCATTCGAAATTGCTAACGCTACAATTTTCACTCATGCAGAAGATCGACAATCCTTACCAAGAGCCTCAGTGATGATTGCTAAAACCCTAATCAGAGGAGATTTCAAACCTGGGAAAGGTTTGGGAAAGTATCAACAAGGGAGAATTCAACCTGTAATTTTACCTAGGCTGGTTGAGAGGTTTGGTTTAGGATACAAACCAACTACTGATGATTGGAAGAGTATTCAGGAACGGAAAAGATTGCATAGGGTTGCCAAACTGGAAGATCAGGAAGTCAATGCCAACAAATTAATAATTCCACATATTTACGAGACCTTTAGAAAGGATGAAGCTGAAATAGATAGTCTAATAATGGAGATGTCAGACCTTCCAATTGCTGCTATTATCGAGAAGTATAAAGAACATGAAATGGATTCTTTAGTATACCCATGCCCTCCAAATTTTGAACTAAATAACTGGGAGGTCATCGAGCTGCCTGTCCTTTCCAAAGAAATTGAAGAGATTTATAGCAATGAATTTGAAAACAAAAAAGATAGTAATTTTGAAACTGAGCTCAATGACCCGATCATAAGCAACGAACCAGAAGAAATTGACGACAATGAGGAGGATATATCGCCTGAACTTCTACGTTTAGTACAGGAGGAGGAAAGATTTGCTTTGCCATATCAAGAA
Protein sequence
EQMAKILDLLAAQKGKAVAETSGPHNGISEVEDTSIYPPGFTPHVSQHHDVSVAPPQPIFYTHAMPTVPLEVGIAQNPAIPMPGQVQPSVQLRSQKSNPSYVYEYDNDRGEAERSESRGKLDILEEILRPIEGANAFGSIDATQLCLISNEQPSSVQTSLAISKPLTIQIPSSYKYRDNKAVLWNYVFGKEATTVTNISGISGMTRSGRCYKPDALKVSQESRLDKGKGKEHLTEDFEEFWNEEPITTKGTSSRKVVSDEEAFEFLKSIKHSNYKVIDQLHRTSARISILSLFLNSEPHRKTLLDVLNKAHVNHDIIVEKLKAAEEALEYSFRSFEIANATIFTHAEDRQSLPRASVMIAKTLIRGDFKPGKGLGKYQQGRIQPVILPRLVERFGLGYKPTTDDWKSIQERKRLHRVAKLEDQEVNANKLIIPHIYETFRKDEAEIDSLIMEMSDLPIAAIIEKYKEHEMDSLVYPCPPNFELNNWEVIELPVLSKEIEEIYSNEFENKKDSNFETELNDPIISNEPEEIDDNEEDISPELLRLVQEEERFALPYQE
Homology
BLAST of Lsi05G007400 vs. ExPASy TrEMBL
Match:
A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)
HSP 1 Score: 233.8 bits (595), Expect = 1.7e-57
Identity = 181/562 (32.21%), Postives = 258/562 (45.91%), Query Frame = 0
Query: 147 LISNEQPSSVQTSLAISKPLTIQIPSSYKYRDNKAVLWNYVFGKEATTVTN---ISGISG 206
+I E+ S+ + + K +T++IP + Y+DN AV W Y E +T+ + + G
Sbjct: 609 VIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKY----ECQFITDNVVFATVEG 668
Query: 207 MTRSGRCYKPDALK-VSQESRLDKGKGK------EHLTEDFEEFWNEEPITTKGTSSRKV 266
+TRSGRCY PD LK VS+E + + KGK E D + + E+ + + +V
Sbjct: 669 ITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKNTLVEKETDHEV 728
Query: 267 VSDEEAFEFLKSIKHSNYKVIDQLHRTSARISILSLFLNSEPHRKTLLDVLNKAHVNHDI 326
VS EEA EFLK IK S YKVI+QLHRT ARIS+LSLF SEPHRK LLD+LN+AHV HDI
Sbjct: 729 VSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFTYSEPHRKVLLDILNRAHVGHDI 788
Query: 327 -------IVEKLKAAE-----------------EALEY---------------------- 386
IVE + A +AL
Sbjct: 789 SVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNI 848
Query: 387 ------------------------------------------------------------ 446
Sbjct: 849 MSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSS 908
Query: 447 ------------------------------SFRSFEIANATIFTH---AEDRQSLPRASV 506
S+RSFEIANATIF + DR + + S+
Sbjct: 909 YSCLLGRPWIHSAGAVPSSLHQSNGRSSGCSYRSFEIANATIFPTEGLSMDRY-VSKTSL 968
Query: 507 MIAKTLIRGDFKPGKGLGKYQQGRIQPVILPRLVERFGLGYKPTTDDWKSIQERKRLHRV 558
MIAKT+I+ F+ KGLGK QG + + LP+ E+FGLGYKP T +W+ ++ + + R
Sbjct: 969 MIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEKVRAKNKEKRS 1028
BLAST of Lsi05G007400 vs. ExPASy TrEMBL
Match:
A0A5D3DEB3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G00440 PE=4 SV=1)
HSP 1 Score: 208.8 bits (530), Expect = 6.0e-50
Identity = 178/589 (30.22%), Postives = 254/589 (43.12%), Query Frame = 0
Query: 151 EQPSSVQTSLAISKPLTIQIPSSYKYRDNKAVLWNYVFGK-EATTVTNISGISGMTRSGR 210
++ + TS K LTIQ+PS +K++D KAV W Y +V NI+GISG+TRSGR
Sbjct: 570 QESHNESTSFCNPKKLTIQVPSPFKFKDLKAVPWRYDCQVITGPSVDNITGISGITRSGR 629
Query: 211 CYKPDALKVSQESR-LDKGKGKE--HLTEDFEEFWNEEPITTKGTSSRKVVSDEEAFEFL 270
CYKPD L V + L++G+ E ++ E ++ E PI K +K+V+DEEA EFL
Sbjct: 630 CYKPDNLTVPLDGLILEQGRKNEKTNVKEHCKDQDVEMPIIAKDIEYKKLVTDEEANEFL 689
Query: 271 KSIKHSNYKVIDQLHRTSARISILSLFLNSEPHRKTLLDVLNKAHVNHDIIVEK------ 330
K +K S YK+I+Q+H T ARIS+LSLFLNSEPHRK LLD+LNKAHV HDI VEK
Sbjct: 690 KIVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFSGIIG 749
Query: 331 ------------------------------------------------------------ 390
Sbjct: 750 NITSSNSIVFTDDEIPPEGLGHTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLP 809
Query: 391 ------------------------------------------------------------ 450
Sbjct: 810 VDMSHIKSSTMVVKAFDGSRREVMGDIELPVKIGPCIFNIVFQVMEITPTYSFLLGRPWI 869
Query: 451 -----------------------------------------LKAAEEALEYSFRSFEIAN 510
++A EEALE SFRSFEIA+
Sbjct: 870 HSAGVVPSTLHQKLKFIVGSKLICVMGEEDFLITKSVSTPYVEATEEALECSFRSFEIAH 929
Query: 511 ATIFTHAEDRQSLP-RASVMIAKTLIRGDFKPGKGLGKYQQGRIQPVILPRLVERFGLGY 558
AT+ D P ++ V + T I G G L K + ++ +P RFGLGY
Sbjct: 930 ATMMEATVDEVIKPHKSKVEVMTTRIMGG--GGYSLNKNLETLLK---IPSNDGRFGLGY 989
BLAST of Lsi05G007400 vs. ExPASy TrEMBL
Match:
A0A5D3DEB3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G00440 PE=4 SV=1)
HSP 1 Score: 64.7 bits (156), Expect = 1.4e-06
Identity = 50/135 (37.04%), Postives = 70/135 (51.85%), Query Frame = 0
Query: 14 KGKAVAETSGPHNGISEVEDTSIYPPGFTPHVSQHHDVSVAPPQPIFYTHAMPTVPLEVG 73
KGK + +T+ N I + +D IYPP F P+ H +V PQ H +PT PL V
Sbjct: 3 KGKVLVDTAQSSNPIQDTDD-PIYPPRFAPY---HMNV----PQSQTAQHYVPTNPLYV- 62
Query: 74 IAQNPAIPMPGQVQPSVQLRSQKSNPSYVYEYDNDRGEAERSESRGKLDILEEILRPIEG 133
+P VQ L +Q D G+ E + ++ KLD+LEE L+ IEG
Sbjct: 63 --------VPPIVQGIEHLEAQAK--------IQDMGQNENTPAKQKLDVLEERLQEIEG 112
Query: 134 ANAFGSIDATQLCLI 149
+ +G+IDATQLCL+
Sbjct: 123 TDVYGNIDATQLCLV 112
HSP 2 Score: 204.9 bits (520), Expect = 8.7e-49
Identity = 161/523 (30.78%), Postives = 219/523 (41.87%), Query Frame = 0
Query: 147 LISNEQPSSVQTSLAISKPLTIQIPSSYKYRDNKAVLWNYVFGKEATTVTNISGISGMTR 206
+I E+ S+ + + K +T++IP + Y+DN AV W Y V + + + G+TR
Sbjct: 609 VIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSAT-VGGITR 668
Query: 207 SGRCYKPDALK-VSQESRLDKGKGK------EHLTEDFEEFWNEEPITTKGTSSRKVVSD 266
SGRCY PD LK VS+E + + KGK E D + + ++ + + +VVS
Sbjct: 669 SGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTKKNTLVEKETDHEVVSK 728
Query: 267 EEAFEFLKSIKHSNYKVIDQLHRTSARISILSLFLNSEPHRKTLLDVLNKAHVNHDIIVE 326
EEA EFLK IK S YKVI+QLHRT ARIS+LSLF+ SEPHRK LLD+LN+AHV HDI V
Sbjct: 729 EEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHVGHDISVN 788
Query: 327 KL---------------------------------------------------------- 386
L
Sbjct: 789 ALSEIVENIIATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSR 848
Query: 387 ------------------------------------------------------------ 446
Sbjct: 849 STLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSC 908
Query: 447 -------------------------------------------------KAAEEALEYSF 489
+A EEALE S+
Sbjct: 909 LLGRPWIHSAGAVPSSLHQRLKFSVECGQAIVYGEEDMFVTKTSVLPYVEATEEALECSY 968
BLAST of Lsi05G007400 vs. ExPASy TrEMBL
Match:
A0A6J1DV70 (uncharacterized protein LOC111024360 OS=Momordica charantia OX=3673 GN=LOC111024360 PE=4 SV=1)
HSP 1 Score: 202.2 bits (513), Expect = 5.6e-48
Identity = 107/196 (54.59%), Postives = 140/196 (71.43%), Query Frame = 0
Query: 132 EGANAFGSIDATQLCLISNEQPSSVQTSLAISKPLTIQIPSSYKYRDNKAVLWNY---VF 191
E A++ S L +I EQP+ + + +I +PLTIQ+PS YKY+DNKAV W+Y
Sbjct: 553 EEASSKYSFKLEPLVVIFKEQPTIISANSSILQPLTIQLPSPYKYKDNKAVPWHYGCHTL 612
Query: 192 GKEATTVTNISGISGMTRSGRCYKPDALKVSQ---ESRLDKGKGKEHLTEDFEEFWNEEP 251
+E + VTNIS +SGMTRSG CYK + LK SQ + ++ KGKE D EE W EEP
Sbjct: 613 DEEVSIVTNISRVSGMTRSGICYKLETLKASQVDEQHKIWTVKGKEKDCPDLEEIWGEEP 672
Query: 252 ITTKGTSSRKVVSDEEAFEFLKSIKHSNYKVIDQLHRTSARISILSLFLNSEPHRKTLLD 311
+ KG+S +K+VSDEEA EFLK IKH+ YKVI+QLH T A IS+LS+F+NS+PHRK L+D
Sbjct: 673 VMAKGSSFKKIVSDEEASEFLKLIKHNEYKVIEQLHHTPACISMLSIFINSKPHRKALMD 732
Query: 312 VLNKAHVNHDIIVEKL 322
VLN++HVN+DI +EKL
Sbjct: 733 VLNQSHVNYDITIEKL 748
BLAST of Lsi05G007400 vs. ExPASy TrEMBL
Match:
A0A6J1DV70 (uncharacterized protein LOC111024360 OS=Momordica charantia OX=3673 GN=LOC111024360 PE=4 SV=1)
HSP 1 Score: 122.9 bits (307), Expect = 4.3e-24
Identity = 73/153 (47.71%), Postives = 93/153 (60.78%), Query Frame = 0
Query: 1 EQMAKILDLLAAQKGKAVAETSGPHNGISEVEDTSIYPPGFTPHVSQHHDVSVAPPQPIF 60
EQM KILDLL AQKGK V E + + ++DTS+Y PGFTP V H+ ++ P QPIF
Sbjct: 21 EQMTKILDLLMAQKGKLVVEEPHASDVVRGLDDTSLYAPGFTPQVHPHNGMTTIPGQPIF 80
Query: 61 YTHAMPTVPLEVGIAQNPAIPMPGQVQPSVQLRSQKSNPSYVYEYDNDRGEAERSE---S 120
YT P V G QN + QV P VQ R ++ +E N E++E S
Sbjct: 81 YTQTPPMVSFGEGAVQNQTFMVSEQVHPLVQQRKDINDLINNHELRNSGKVTEKAEKIAS 140
Query: 121 RGKLDILEEILRPIEGANAFGSIDATQLCLISN 151
+GKLD LEE L+ IEGA+AF SIDATQLCL+++
Sbjct: 141 KGKLDFLEERLQAIEGADAFRSIDATQLCLMTD 173
HSP 2 Score: 196.4 bits (498), Expect = 3.1e-46
Identity = 174/583 (29.85%), Postives = 242/583 (41.51%), Query Frame = 0
Query: 158 TSLAISKPLTIQIPSSYKYRDNKAVLWNYVFGK-EATTVTNISGISGMTRSGRCYKPDAL 217
TS K L IQ+PS +K++D KAV W Y +V NI+GISG+TRSGRCYKPD L
Sbjct: 223 TSFCNPKKLPIQVPSPFKFKDLKAVPWRYDCQVITGPSVDNITGISGITRSGRCYKPDNL 282
Query: 218 KVSQESR-LDKGK--GKEHLTEDFEEFWNEEPITTKGTSSRKVVSDEEAFEFLKSIKHSN 277
V + L++G+ K ++ E ++ E PI K + +V+DEEA EFLK +K S
Sbjct: 283 TVPSDGLILEQGRKNEKRNVKEHCKDQDVEMPIIAKDIEYKNLVTDEEANEFLKIVKQSE 342
Query: 278 YKVIDQLHRTSARISILSLFLNSEPHRKTLLDVLNKAHVNHDIIVEK------------- 337
YK+I+Q+H T ARIS+LSLFLNSEPHRK LLD+LNKAHV HDI V+K
Sbjct: 343 YKIIEQMHHTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVKKFSGIIGNITSSNS 402
Query: 338 ------------------------------------------------------------ 397
Sbjct: 403 IVFTDDKIPPEGLGHTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIK 462
Query: 398 ------------------------------------------------------------ 457
Sbjct: 463 SSTMVVKAFDGSRREVMDDIELPVKIGSCIFNIVFQVMEITPTYRFLLGRPWIHSAGVVP 522
Query: 458 ----------------------------------LKAAEEALEYSFRSFEIANATIFTHA 517
++A EEALE SFRSFEIA+AT+
Sbjct: 523 STLHQKLKFIVGSKLICVMGEEDFLITKPVSTPYVEATEEALECSFRSFEIAHATMMEAT 582
Query: 518 EDRQSLP-RASVMIAKTLIRGDFKPGKGLGKYQQGRIQPVILPRLVERFGLGYKPTTDDW 558
D P ++ V + T I G G L K + ++ P RFGLGYK + D
Sbjct: 583 VDEVIKPHKSKVEVMTTRIMGG--RGYSLNKNLETLLK---TPSNDGRFGLGYKSSIYDK 642
BLAST of Lsi05G007400 vs. NCBI nr
Match:
KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 233.8 bits (595), Expect = 3.6e-57
Identity = 181/562 (32.21%), Postives = 258/562 (45.91%), Query Frame = 0
Query: 147 LISNEQPSSVQTSLAISKPLTIQIPSSYKYRDNKAVLWNYVFGKEATTVTN---ISGISG 206
+I E+ S+ + + K +T++IP + Y+DN AV W Y E +T+ + + G
Sbjct: 609 VIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKY----ECQFITDNVVFATVEG 668
Query: 207 MTRSGRCYKPDALK-VSQESRLDKGKGK------EHLTEDFEEFWNEEPITTKGTSSRKV 266
+TRSGRCY PD LK VS+E + + KGK E D + + E+ + + +V
Sbjct: 669 ITRSGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKNTLVEKETDHEV 728
Query: 267 VSDEEAFEFLKSIKHSNYKVIDQLHRTSARISILSLFLNSEPHRKTLLDVLNKAHVNHDI 326
VS EEA EFLK IK S YKVI+QLHRT ARIS+LSLF SEPHRK LLD+LN+AHV HDI
Sbjct: 729 VSKEEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFTYSEPHRKVLLDILNRAHVGHDI 788
Query: 327 -------IVEKLKAAE-----------------EALEY---------------------- 386
IVE + A +AL
Sbjct: 789 SVNALSEIVENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNI 848
Query: 387 ------------------------------------------------------------ 446
Sbjct: 849 MSRSTLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSS 908
Query: 447 ------------------------------SFRSFEIANATIFTH---AEDRQSLPRASV 506
S+RSFEIANATIF + DR + + S+
Sbjct: 909 YSCLLGRPWIHSAGAVPSSLHQSNGRSSGCSYRSFEIANATIFPTEGLSMDRY-VSKTSL 968
Query: 507 MIAKTLIRGDFKPGKGLGKYQQGRIQPVILPRLVERFGLGYKPTTDDWKSIQERKRLHRV 558
MIAKT+I+ F+ KGLGK QG + + LP+ E+FGLGYKP T +W+ ++ + + R
Sbjct: 969 MIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEKVRAKNKEKRS 1028
BLAST of Lsi05G007400 vs. NCBI nr
Match:
TYK21788.1 (uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 208.8 bits (530), Expect = 1.2e-49
Identity = 178/589 (30.22%), Postives = 254/589 (43.12%), Query Frame = 0
Query: 151 EQPSSVQTSLAISKPLTIQIPSSYKYRDNKAVLWNYVFGK-EATTVTNISGISGMTRSGR 210
++ + TS K LTIQ+PS +K++D KAV W Y +V NI+GISG+TRSGR
Sbjct: 570 QESHNESTSFCNPKKLTIQVPSPFKFKDLKAVPWRYDCQVITGPSVDNITGISGITRSGR 629
Query: 211 CYKPDALKVSQESR-LDKGKGKE--HLTEDFEEFWNEEPITTKGTSSRKVVSDEEAFEFL 270
CYKPD L V + L++G+ E ++ E ++ E PI K +K+V+DEEA EFL
Sbjct: 630 CYKPDNLTVPLDGLILEQGRKNEKTNVKEHCKDQDVEMPIIAKDIEYKKLVTDEEANEFL 689
Query: 271 KSIKHSNYKVIDQLHRTSARISILSLFLNSEPHRKTLLDVLNKAHVNHDIIVEK------ 330
K +K S YK+I+Q+H T ARIS+LSLFLNSEPHRK LLD+LNKAHV HDI VEK
Sbjct: 690 KIVKQSEYKIIEQMHHTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFSGIIG 749
Query: 331 ------------------------------------------------------------ 390
Sbjct: 750 NITSSNSIVFTDDEIPPEGLGHTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLP 809
Query: 391 ------------------------------------------------------------ 450
Sbjct: 810 VDMSHIKSSTMVVKAFDGSRREVMGDIELPVKIGPCIFNIVFQVMEITPTYSFLLGRPWI 869
Query: 451 -----------------------------------------LKAAEEALEYSFRSFEIAN 510
++A EEALE SFRSFEIA+
Sbjct: 870 HSAGVVPSTLHQKLKFIVGSKLICVMGEEDFLITKSVSTPYVEATEEALECSFRSFEIAH 929
Query: 511 ATIFTHAEDRQSLP-RASVMIAKTLIRGDFKPGKGLGKYQQGRIQPVILPRLVERFGLGY 558
AT+ D P ++ V + T I G G L K + ++ +P RFGLGY
Sbjct: 930 ATMMEATVDEVIKPHKSKVEVMTTRIMGG--GGYSLNKNLETLLK---IPSNDGRFGLGY 989
BLAST of Lsi05G007400 vs. NCBI nr
Match:
KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])
HSP 1 Score: 204.9 bits (520), Expect = 1.8e-48
Identity = 161/523 (30.78%), Postives = 219/523 (41.87%), Query Frame = 0
Query: 147 LISNEQPSSVQTSLAISKPLTIQIPSSYKYRDNKAVLWNYVFGKEATTVTNISGISGMTR 206
+I E+ S+ + + K +T++IP + Y+DN AV W Y V + + + G+TR
Sbjct: 609 VIHYEEKPSIMSYIQKPKAMTVEIPGPFAYKDNHAVPWKYECQFITDNVVSAT-VGGITR 668
Query: 207 SGRCYKPDALK-VSQESRLDKGKGK------EHLTEDFEEFWNEEPITTKGTSSRKVVSD 266
SGRCY PD LK VS+E + + KGK E D + + ++ + + +VVS
Sbjct: 669 SGRCYTPDNLKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTKKNTLVEKETDHEVVSK 728
Query: 267 EEAFEFLKSIKHSNYKVIDQLHRTSARISILSLFLNSEPHRKTLLDVLNKAHVNHDIIVE 326
EEA EFLK IK S YKVI+QLHRT ARIS+LSLF+ SEPHRK LLD+LN+AHV HDI V
Sbjct: 729 EEACEFLKLIKQSEYKVIEQLHRTPARISMLSLFMYSEPHRKVLLDILNRAHVGHDISVN 788
Query: 327 KL---------------------------------------------------------- 386
L
Sbjct: 789 ALSEIVENIIATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSR 848
Query: 387 ------------------------------------------------------------ 446
Sbjct: 849 STLMKLPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSC 908
Query: 447 -------------------------------------------------KAAEEALEYSF 489
+A EEALE S+
Sbjct: 909 LLGRPWIHSAGAVPSSLHQRLKFSVECGQAIVYGEEDMFVTKTSVLPYVEATEEALECSY 968
BLAST of Lsi05G007400 vs. NCBI nr
Match:
XP_022157707.1 (uncharacterized protein LOC111024360 [Momordica charantia])
HSP 1 Score: 202.2 bits (513), Expect = 1.2e-47
Identity = 107/196 (54.59%), Postives = 140/196 (71.43%), Query Frame = 0
Query: 132 EGANAFGSIDATQLCLISNEQPSSVQTSLAISKPLTIQIPSSYKYRDNKAVLWNY---VF 191
E A++ S L +I EQP+ + + +I +PLTIQ+PS YKY+DNKAV W+Y
Sbjct: 553 EEASSKYSFKLEPLVVIFKEQPTIISANSSILQPLTIQLPSPYKYKDNKAVPWHYGCHTL 612
Query: 192 GKEATTVTNISGISGMTRSGRCYKPDALKVSQ---ESRLDKGKGKEHLTEDFEEFWNEEP 251
+E + VTNIS +SGMTRSG CYK + LK SQ + ++ KGKE D EE W EEP
Sbjct: 613 DEEVSIVTNISRVSGMTRSGICYKLETLKASQVDEQHKIWTVKGKEKDCPDLEEIWGEEP 672
Query: 252 ITTKGTSSRKVVSDEEAFEFLKSIKHSNYKVIDQLHRTSARISILSLFLNSEPHRKTLLD 311
+ KG+S +K+VSDEEA EFLK IKH+ YKVI+QLH T A IS+LS+F+NS+PHRK L+D
Sbjct: 673 VMAKGSSFKKIVSDEEASEFLKLIKHNEYKVIEQLHHTPACISMLSIFINSKPHRKALMD 732
Query: 312 VLNKAHVNHDIIVEKL 322
VLN++HVN+DI +EKL
Sbjct: 733 VLNQSHVNYDITIEKL 748
BLAST of Lsi05G007400 vs. NCBI nr
Match:
XP_022157707.1 (uncharacterized protein LOC111024360 [Momordica charantia])
HSP 1 Score: 122.9 bits (307), Expect = 8.9e-24
Identity = 73/153 (47.71%), Postives = 93/153 (60.78%), Query Frame = 0
Query: 1 EQMAKILDLLAAQKGKAVAETSGPHNGISEVEDTSIYPPGFTPHVSQHHDVSVAPPQPIF 60
EQM KILDLL AQKGK V E + + ++DTS+Y PGFTP V H+ ++ P QPIF
Sbjct: 21 EQMTKILDLLMAQKGKLVVEEPHASDVVRGLDDTSLYAPGFTPQVHPHNGMTTIPGQPIF 80
Query: 61 YTHAMPTVPLEVGIAQNPAIPMPGQVQPSVQLRSQKSNPSYVYEYDNDRGEAERSE---S 120
YT P V G QN + QV P VQ R ++ +E N E++E S
Sbjct: 81 YTQTPPMVSFGEGAVQNQTFMVSEQVHPLVQQRKDINDLINNHELRNSGKVTEKAEKIAS 140
Query: 121 RGKLDILEEILRPIEGANAFGSIDATQLCLISN 151
+GKLD LEE L+ IEGA+AF SIDATQLCL+++
Sbjct: 141 KGKLDFLEERLQAIEGADAFRSIDATQLCLMTD 173
HSP 2 Score: 196.4 bits (498), Expect = 6.4e-46
Identity = 174/583 (29.85%), Postives = 242/583 (41.51%), Query Frame = 0
Query: 158 TSLAISKPLTIQIPSSYKYRDNKAVLWNYVFGK-EATTVTNISGISGMTRSGRCYKPDAL 217
TS K L IQ+PS +K++D KAV W Y +V NI+GISG+TRSGRCYKPD L
Sbjct: 223 TSFCNPKKLPIQVPSPFKFKDLKAVPWRYDCQVITGPSVDNITGISGITRSGRCYKPDNL 282
Query: 218 KVSQESR-LDKGK--GKEHLTEDFEEFWNEEPITTKGTSSRKVVSDEEAFEFLKSIKHSN 277
V + L++G+ K ++ E ++ E PI K + +V+DEEA EFLK +K S
Sbjct: 283 TVPSDGLILEQGRKNEKRNVKEHCKDQDVEMPIIAKDIEYKNLVTDEEANEFLKIVKQSE 342
Query: 278 YKVIDQLHRTSARISILSLFLNSEPHRKTLLDVLNKAHVNHDIIVEK------------- 337
YK+I+Q+H T ARIS+LSLFLNSEPHRK LLD+LNKAHV HDI V+K
Sbjct: 343 YKIIEQMHHTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVKKFSGIIGNITSSNS 402
Query: 338 ------------------------------------------------------------ 397
Sbjct: 403 IVFTDDKIPPEGLGHTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIK 462
Query: 398 ------------------------------------------------------------ 457
Sbjct: 463 SSTMVVKAFDGSRREVMDDIELPVKIGSCIFNIVFQVMEITPTYRFLLGRPWIHSAGVVP 522
Query: 458 ----------------------------------LKAAEEALEYSFRSFEIANATIFTHA 517
++A EEALE SFRSFEIA+AT+
Sbjct: 523 STLHQKLKFIVGSKLICVMGEEDFLITKPVSTPYVEATEEALECSFRSFEIAHATMMEAT 582
Query: 518 EDRQSLP-RASVMIAKTLIRGDFKPGKGLGKYQQGRIQPVILPRLVERFGLGYKPTTDDW 558
D P ++ V + T I G G L K + ++ P RFGLGYK + D
Sbjct: 583 VDEVIKPHKSKVEVMTTRIMGG--RGYSLNKNLETLLK---TPSNDGRFGLGYKSSIYDK 642
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VAU5 | 1.7e-57 | 32.21 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3DEB3 | 6.0e-50 | 30.22 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5D3DEB3 | 1.4e-06 | 37.04 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A6J1DV70 | 5.6e-48 | 54.59 | uncharacterized protein LOC111024360 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1DV70 | 4.3e-24 | 47.71 | uncharacterized protein LOC111024360 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
Match Name | E-value | Identity | Description | |
KAA0065293.1 | 3.6e-57 | 32.21 | uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa] | [more] |
TYK21788.1 | 1.2e-49 | 30.22 | uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa] | [more] |
KAA0061241.1 | 1.8e-48 | 30.78 | uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa] | [more] |
XP_022157707.1 | 1.2e-47 | 54.59 | uncharacterized protein LOC111024360 [Momordica charantia] | [more] |
XP_022157707.1 | 8.9e-24 | 47.71 | uncharacterized protein LOC111024360 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |