
Lsi05G007090 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTACTACTTTTCACCGTCTTTGTCTTTGATGTCATTGCTTTTGGCTTGGCCATTGCAGCTGAGCAAAGGAGAAGCATTGTAAGCTCATGCCCTTTCCCCTTTTTCTCTCTCTTTACTATTTCTCTTCATTGTTGCATATTTTAGTGAAAATTTCTGCCTTTACTGAAAAATCTTAGTGATTTATAGGCTTTCTTTTCTGGGTTTGCTTAGTTCATTTGATTCTGAATATGGGTTCTTTCAGCCGTAGAGAGAGAATAAAAAGCTAGAATCTTTCCCTTCAAAATTGGTTTTTTAGGTTAAAGAGATTTAGAACTTTCCTGCTGGTTGTCTCAGTGGCCAAACAAAGGAAAGTCTTTTGCTTCAACTGGAAAAGCGCTCGGATCTACTTTCATTTGTTTTCTTAAACCCCAATTTGTGCTGTTCTTATGGAAATTTCTTGTGAAGGATAAAATATAATTCATTTTTACCATATCTTTGCAATTGCTTAGTTTAGGGCTTCTTAATGAGCTAAAGATGATGTCTTCACTGTGGACAAATTTGTTGTGAACAATCATTTTGTACCATATCTTTGGGATTTCTGACTTCCTGATGTGCAAAATATGATTTCTTCACTGGAAGTCTCCTGTTGTTGGGATTTGATTTGTAACATAGATGGGAGGTGGTGATACACCATAACAAATTTCGAAAGACTCCTCTTTTTGTGTAAGAATGCTTAACCGTCGCACGGATATTATTTGCGGCAGAGCAAGATATTTTACAAACCTTCTTGAAAGAGAGATCTGCAACTCTTGAAAGATTACACTTTCATCGAAGGATGCTTAACCACTGCACCGATATTACTCAGGGATGAGGTTGAGATTGCTCAAACTTTCTTTAAGGAGAGATCTGTGGATCTCAAAGACCAATCAAAAGATAAATTCTTCTTCAAAGGCAGATCTGATCTCTTAGGTCCCACATTGTTTGGTTTTGACTCACAAGCCATTATTTTCCCCTTACTTTCTTTACCTGCTCCCTACAAGAACAGCCAAACTCATAATTCAGTGGGGGACTGTTTGAAATTCAATAATAGTCTTCTTTTTGTAAAGAGTTAGTTCAAGTACTTAATACTTATGCATTCTACTCTGTTGTACTCATACAAAGGAGGAGATATTTATCTCTAAAAGCTTTCAATATTATAATGGCTTCATATTATTCTTTCATAAGCTCATTGAATTGAGATGAGTATTTTAATTCCTTACAGATATTATAAACTTTGAATCTCAATAAGTTTTCTCCGGGTTTGAATTAACATAAGCATTTGTATCTTTTTTTCTTTTTTTTGTAAATGATACTGGCATTTTAATCATTGGTTAAGAAGCACGATTTGAAATCGTTTCACAGGCAAAGATAGTTGAAGACACAGATGCAAAAAGAAACTATTGTGTATATGACTCAGACATTTCAACTGGATTAGGAGTTGGAGCATTTCTCTTCCTGATGGCTAGTCACATCCTCATAATGGTGGCTAGCCGCTGCTTTTGCTGCGGCAAACCTCTGAGTCCTGGTGGTTCGAGGGCTTGGGCAGTCATTCTTTTCATAACTTGCTGGTAAGTAGAGCAAACCAATATGTTTTGGCATCGAATTCTTGTACCAAAAACAGATGGTTTTTTTATACTGGTATCATGGTATGATATTGTCTATCGTTGTGAAATAATCTGTTTCAGGGTGTTTTTCTTCATCGCCGAGATTTGCCTGTTGGCGGGTTCGGCTAGGAATGCATATCACACCAAGTACAGAACAGTGCTTACTGATACTCCTCCCTCTTGTCAAATGTTGAGACGAGGAGTGTTTGCTGCAGGAGCAGCTTTCATTTTCTTCACTTCCATTGTTTCTCAGTTCTACTACGTTTGCTACTCGAGGGCCCGGGAGAGCTTTCAATCATACAACAAAGACACCGGCATTGGCATGAGTACCTACAAATGA CTACTACTTTTCACCGTCTTTGTCTTTGATGTCATTGCTTTTGGCTTGGCCATTGCAGCTGAGCAAAGGAGAAGCATTGCAAAGATAGTTGAAGACACAGATGCAAAAAGAAACTATTGTGTATATGACTCAGACATTTCAACTGGATTAGGAGTTGGAGCATTTCTCTTCCTGATGGCTAGTCACATCCTCATAATGGTGGCTAGCCGCTGCTTTTGCTGCGGCAAACCTCTGAGTCCTGGTGAGCAAACCAATATGTTTTGGCATCGAATTCTTGTACCAAAAACAGATGGTTTTTTTATACTGGTATCATGGTATGATATTGTCTATCGTTGTGAAATAATCTGTTTCAGGGTGTTTTTCTTCATCGCCGAGATTTGCCTGTTGGCGGGTTCGGCTAGGAATGCATATCACACCAAGTACAGAACAGTGCTTACTGATACTCCTCCCTCTTGTCAAATGTTGAGACGAGGAGTGTTTGCTGCAGGAGCAGCTTTCATTTTCTTCACTTCCATTGTTTCTCAGTTCTACTACGTTTGCTACTCGAGGGCCCGGGAGAGCTTTCAATCATACAACAAAGACACCGGCATTGGCATGAGTACCTACAAATGA CTACTACTTTTCACCGTCTTTGTCTTTGATGTCATTGCTTTTGGCTTGGCCATTGCAGCTGAGCAAAGGAGAAGCATTGCAAAGATAGTTGAAGACACAGATGCAAAAAGAAACTATTGTGTATATGACTCAGACATTTCAACTGGATTAGGAGTTGGAGCATTTCTCTTCCTGATGGCTAGTCACATCCTCATAATGGTGGCTAGCCGCTGCTTTTGCTGCGGCAAACCTCTGAGTCCTGGTGAGCAAACCAATATGTTTTGGCATCGAATTCTTGTACCAAAAACAGATGGTTTTTTTATACTGGTATCATGGTATGATATTGTCTATCGTTGTGAAATAATCTGTTTCAGGGTGTTTTTCTTCATCGCCGAGATTTGCCTGTTGGCGGGTTCGGCTAGGAATGCATATCACACCAAGTACAGAACAGTGCTTACTGATACTCCTCCCTCTTGTCAAATGTTGAGACGAGGAGTGTTTGCTGCAGGAGCAGCTTTCATTTTCTTCACTTCCATTGTTTCTCAGTTCTACTACGTTTGCTACTCGAGGGCCCGGGAGAGCTTTCAATCATACAACAAAGACACCGGCATTGGCATGAGTACCTACAAATGA LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMASHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVFFFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDTGIGMSTYK Homology
BLAST of Lsi05G007090 vs. ExPASy TrEMBL
Match: A0A5D3DJF4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold580G00140 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 5.0e-79 Identity = 162/203 (79.80%), Postives = 171/203 (84.24%), Query Frame = 0
BLAST of Lsi05G007090 vs. ExPASy TrEMBL
Match: A0A1S3BTF0 (uncharacterized protein 2C05 isoform X1 OS=Cucumis melo OX=3656 GN=2C05 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 5.0e-79 Identity = 162/203 (79.80%), Postives = 171/203 (84.24%), Query Frame = 0
BLAST of Lsi05G007090 vs. ExPASy TrEMBL
Match: A0A6J1CN21 (uncharacterized protein LOC111012773 OS=Momordica charantia OX=3673 GN=LOC111012773 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 5.5e-78 Identity = 160/203 (78.82%), Postives = 165/203 (81.28%), Query Frame = 0
BLAST of Lsi05G007090 vs. ExPASy TrEMBL
Match: A0A6J1KS26 (uncharacterized protein LOC111496714 OS=Cucurbita maxima OX=3661 GN=LOC111496714 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 2.1e-77 Identity = 158/206 (76.70%), Postives = 165/206 (80.10%), Query Frame = 0
BLAST of Lsi05G007090 vs. ExPASy TrEMBL
Match: A0A0A0L5B8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104340 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 2.1e-77 Identity = 161/203 (79.31%), Postives = 169/203 (83.25%), Query Frame = 0
BLAST of Lsi05G007090 vs. NCBI nr
Match: XP_038903364.1 (uncharacterized protein LOC120089980 [Benincasa hispida]) HSP 1 Score: 312.4 bits (799), Expect = 2.9e-81 Identity = 167/203 (82.27%), Postives = 173/203 (85.22%), Query Frame = 0
BLAST of Lsi05G007090 vs. NCBI nr
Match: XP_008452269.1 (PREDICTED: uncharacterized protein 2C05 isoform X1 [Cucumis melo] >KAA0060671.1 uncharacterized protein E6C27_scaffold22G005660 [Cucumis melo var. makuwa] >TYK23801.1 uncharacterized protein E5676_scaffold580G00140 [Cucumis melo var. makuwa]) HSP 1 Score: 303.9 bits (777), Expect = 1.0e-78 Identity = 162/203 (79.80%), Postives = 171/203 (84.24%), Query Frame = 0
BLAST of Lsi05G007090 vs. NCBI nr
Match: XP_022142726.1 (uncharacterized protein LOC111012773 [Momordica charantia]) HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77 Identity = 160/203 (78.82%), Postives = 165/203 (81.28%), Query Frame = 0
BLAST of Lsi05G007090 vs. NCBI nr
Match: XP_004133701.1 (uncharacterized protein LOC101203051 [Cucumis sativus] >KGN56229.1 hypothetical protein Csa_009616 [Cucumis sativus]) HSP 1 Score: 298.5 bits (763), Expect = 4.3e-77 Identity = 161/203 (79.31%), Postives = 169/203 (83.25%), Query Frame = 0
BLAST of Lsi05G007090 vs. NCBI nr
Match: XP_023002999.1 (uncharacterized protein LOC111496714 [Cucurbita maxima] >XP_023540155.1 uncharacterized protein LOC111800609 [Cucurbita pepo subsp. pepo] >KAG6600734.1 hypothetical protein SDJN03_05967, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 298.5 bits (763), Expect = 4.3e-77 Identity = 158/206 (76.70%), Postives = 165/206 (80.10%), Query Frame = 0
BLAST of Lsi05G007090 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 208.0 bits (528), Expect = 7.2e-54 Identity = 107/182 (58.79%), Postives = 127/182 (69.78%), Query Frame = 0
BLAST of Lsi05G007090 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 191.4 bits (485), Expect = 7.0e-49 Identity = 102/194 (52.58%), Postives = 128/194 (65.98%), Query Frame = 0
BLAST of Lsi05G007090 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 188.7 bits (478), Expect = 4.5e-48 Identity = 108/201 (53.73%), Postives = 135/201 (67.16%), Query Frame = 0
BLAST of Lsi05G007090 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 184.9 bits (468), Expect = 6.5e-47 Identity = 98/191 (51.31%), Postives = 128/191 (67.02%), Query Frame = 0
BLAST of Lsi05G007090 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 141.0 bits (354), Expect = 1.1e-33 Identity = 78/205 (38.05%), Postives = 121/205 (59.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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