Lsi05G007090 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G007090
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function (DUF1218)
Location	chr05: 9561977 .. 9563938 (+)
RNA-Seq Expression	Lsi05G007090
Synteny	Lsi05G007090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTACTACTTTTCACCGTCTTTGTCTTTGATGTCATTGCTTTTGGCTTGGCCATTGCAGCTGAGCAAAGGAGAAGCATTGTAAGCTCATGCCCTTTCCCCTTTTTCTCTCTCTTTACTATTTCTCTTCATTGTTGCATATTTTAGTGAAAATTTCTGCCTTTACTGAAAAATCTTAGTGATTTATAGGCTTTCTTTTCTGGGTTTGCTTAGTTCATTTGATTCTGAATATGGGTTCTTTCAGCCGTAGAGAGAGAATAAAAAGCTAGAATCTTTCCCTTCAAAATTGGTTTTTTAGGTTAAAGAGATTTAGAACTTTCCTGCTGGTTGTCTCAGTGGCCAAACAAAGGAAAGTCTTTTGCTTCAACTGGAAAAGCGCTCGGATCTACTTTCATTTGTTTTCTTAAACCCCAATTTGTGCTGTTCTTATGGAAATTTCTTGTGAAGGATAAAATATAATTCATTTTTACCATATCTTTGCAATTGCTTAGTTTAGGGCTTCTTAATGAGCTAAAGATGATGTCTTCACTGTGGACAAATTTGTTGTGAACAATCATTTTGTACCATATCTTTGGGATTTCTGACTTCCTGATGTGCAAAATATGATTTCTTCACTGGAAGTCTCCTGTTGTTGGGATTTGATTTGTAACATAGATGGGAGGTGGTGATACACCATAACAAATTTCGAAAGACTCCTCTTTTTGTGTAAGAATGCTTAACCGTCGCACGGATATTATTTGCGGCAGAGCAAGATATTTTACAAACCTTCTTGAAAGAGAGATCTGCAACTCTTGAAAGATTACACTTTCATCGAAGGATGCTTAACCACTGCACCGATATTACTCAGGGATGAGGTTGAGATTGCTCAAACTTTCTTTAAGGAGAGATCTGTGGATCTCAAAGACCAATCAAAAGATAAATTCTTCTTCAAAGGCAGATCTGATCTCTTAGGTCCCACATTGTTTGGTTTTGACTCACAAGCCATTATTTTCCCCTTACTTTCTTTACCTGCTCCCTACAAGAACAGCCAAACTCATAATTCAGTGGGGGACTGTTTGAAATTCAATAATAGTCTTCTTTTTGTAAAGAGTTAGTTCAAGTACTTAATACTTATGCATTCTACTCTGTTGTACTCATACAAAGGAGGAGATATTTATCTCTAAAAGCTTTCAATATTATAATGGCTTCATATTATTCTTTCATAAGCTCATTGAATTGAGATGAGTATTTTAATTCCTTACAGATATTATAAACTTTGAATCTCAATAAGTTTTCTCCGGGTTTGAATTAACATAAGCATTTGTATCTTTTTTTCTTTTTTTTGTAAATGATACTGGCATTTTAATCATTGGTTAAGAAGCACGATTTGAAATCGTTTCACAGGCAAAGATAGTTGAAGACACAGATGCAAAAAGAAACTATTGTGTATATGACTCAGACATTTCAACTGGATTAGGAGTTGGAGCATTTCTCTTCCTGATGGCTAGTCACATCCTCATAATGGTGGCTAGCCGCTGCTTTTGCTGCGGCAAACCTCTGAGTCCTGGTGGTTCGAGGGCTTGGGCAGTCATTCTTTTCATAACTTGCTGGTAAGTAGAGCAAACCAATATGTTTTGGCATCGAATTCTTGTACCAAAAACAGATGGTTTTTTTATACTGGTATCATGGTATGATATTGTCTATCGTTGTGAAATAATCTGTTTCAGGGTGTTTTTCTTCATCGCCGAGATTTGCCTGTTGGCGGGTTCGGCTAGGAATGCATATCACACCAAGTACAGAACAGTGCTTACTGATACTCCTCCCTCTTGTCAAATGTTGAGACGAGGAGTGTTTGCTGCAGGAGCAGCTTTCATTTTCTTCACTTCCATTGTTTCTCAGTTCTACTACGTTTGCTACTCGAGGGCCCGGGAGAGCTTTCAATCATACAACAAAGACACCGGCATTGGCATGAGTACCTACAAATGA

mRNA sequence

CTACTACTTTTCACCGTCTTTGTCTTTGATGTCATTGCTTTTGGCTTGGCCATTGCAGCTGAGCAAAGGAGAAGCATTGCAAAGATAGTTGAAGACACAGATGCAAAAAGAAACTATTGTGTATATGACTCAGACATTTCAACTGGATTAGGAGTTGGAGCATTTCTCTTCCTGATGGCTAGTCACATCCTCATAATGGTGGCTAGCCGCTGCTTTTGCTGCGGCAAACCTCTGAGTCCTGGTGAGCAAACCAATATGTTTTGGCATCGAATTCTTGTACCAAAAACAGATGGTTTTTTTATACTGGTATCATGGTATGATATTGTCTATCGTTGTGAAATAATCTGTTTCAGGGTGTTTTTCTTCATCGCCGAGATTTGCCTGTTGGCGGGTTCGGCTAGGAATGCATATCACACCAAGTACAGAACAGTGCTTACTGATACTCCTCCCTCTTGTCAAATGTTGAGACGAGGAGTGTTTGCTGCAGGAGCAGCTTTCATTTTCTTCACTTCCATTGTTTCTCAGTTCTACTACGTTTGCTACTCGAGGGCCCGGGAGAGCTTTCAATCATACAACAAAGACACCGGCATTGGCATGAGTACCTACAAATGA

Coding sequence (CDS)

CTACTACTTTTCACCGTCTTTGTCTTTGATGTCATTGCTTTTGGCTTGGCCATTGCAGCTGAGCAAAGGAGAAGCATTGCAAAGATAGTTGAAGACACAGATGCAAAAAGAAACTATTGTGTATATGACTCAGACATTTCAACTGGATTAGGAGTTGGAGCATTTCTCTTCCTGATGGCTAGTCACATCCTCATAATGGTGGCTAGCCGCTGCTTTTGCTGCGGCAAACCTCTGAGTCCTGGTGAGCAAACCAATATGTTTTGGCATCGAATTCTTGTACCAAAAACAGATGGTTTTTTTATACTGGTATCATGGTATGATATTGTCTATCGTTGTGAAATAATCTGTTTCAGGGTGTTTTTCTTCATCGCCGAGATTTGCCTGTTGGCGGGTTCGGCTAGGAATGCATATCACACCAAGTACAGAACAGTGCTTACTGATACTCCTCCCTCTTGTCAAATGTTGAGACGAGGAGTGTTTGCTGCAGGAGCAGCTTTCATTTTCTTCACTTCCATTGTTTCTCAGTTCTACTACGTTTGCTACTCGAGGGCCCGGGAGAGCTTTCAATCATACAACAAAGACACCGGCATTGGCATGAGTACCTACAAATGA

Protein sequence

LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMASHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVFFFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDTGIGMSTYK

Homology

[Close]

BLAST of Lsi05G007090 vs. ExPASy TrEMBL
Match: A0A5D3DJF4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold580G00140 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.0e-79
Identity = 162/203 (79.80%), Postives = 171/203 (84.24%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDT AKRNYCVYDSDISTGLGVGAFLFL+A
Sbjct: 5   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTGAKRNYCVYDSDISTGLGVGAFLFLLA 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVF 120
           S ILIMVASRCFCCGKPLSPG                      +W  +++   I C+ VF
Sbjct: 65  SQILIMVASRCFCCGKPLSPGGSR-------------------AWAVVLF---ITCW-VF 124

Query: 121 FFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 180
           F IAEICLLAGSARNAYHTKYRT+LTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC
Sbjct: 125 FLIAEICLLAGSARNAYHTKYRTLLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 184

Query: 181 YSRARESFQSYNKDTGIGMSTYK 204
           YSRARESFQSY+KDTG+GMSTYK
Sbjct: 185 YSRARESFQSYSKDTGVGMSTYK 184

[Close]

BLAST of Lsi05G007090 vs. ExPASy TrEMBL
Match: A0A1S3BTF0 (uncharacterized protein 2C05 isoform X1 OS=Cucumis melo OX=3656 GN=2C05 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.0e-79
Identity = 162/203 (79.80%), Postives = 171/203 (84.24%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDT AKRNYCVYDSDISTGLGVGAFLFL+A
Sbjct: 5   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTGAKRNYCVYDSDISTGLGVGAFLFLLA 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVF 120
           S ILIMVASRCFCCGKPLSPG                      +W  +++   I C+ VF
Sbjct: 65  SQILIMVASRCFCCGKPLSPGGSR-------------------AWAVVLF---ITCW-VF 124

Query: 121 FFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 180
           F IAEICLLAGSARNAYHTKYRT+LTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC
Sbjct: 125 FLIAEICLLAGSARNAYHTKYRTLLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 184

Query: 181 YSRARESFQSYNKDTGIGMSTYK 204
           YSRARESFQSY+KDTG+GMSTYK
Sbjct: 185 YSRARESFQSYSKDTGVGMSTYK 184

[Close]

BLAST of Lsi05G007090 vs. ExPASy TrEMBL
Match: A0A6J1CN21 (uncharacterized protein LOC111012773 OS=Momordica charantia OX=3673 GN=LOC111012773 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.5e-78
Identity = 160/203 (78.82%), Postives = 165/203 (81.28%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           LLLFTVFVFDVIAFGLAIAAEQRRSIAKIV+DTDAKRNYCVYDSDISTGLGVG FLFLMA
Sbjct: 5   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKRNYCVYDSDISTGLGVGGFLFLMA 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVF 120
           S ILIMVASRCFCCG+PLSPG        R L         +  W             VF
Sbjct: 65  SQILIMVASRCFCCGRPLSPGGS------RALAV----ILFITCW-------------VF 124

Query: 121 FFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 180
           FFIAEICLLAGS RNAYHTKYRT+ T+TPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC
Sbjct: 125 FFIAEICLLAGSVRNAYHTKYRTMFTETPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 184

Query: 181 YSRARESFQSYNKDTGIGMSTYK 204
           YSRARESFQSYNKD GIGMSTYK
Sbjct: 185 YSRARESFQSYNKDAGIGMSTYK 184

[Close]

BLAST of Lsi05G007090 vs. ExPASy TrEMBL
Match: A0A6J1KS26 (uncharacterized protein LOC111496714 OS=Cucurbita maxima OX=3661 GN=LOC111496714 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.1e-77
Identity = 158/206 (76.70%), Postives = 165/206 (80.10%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           LLLFTVF+FD+IAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA
Sbjct: 5   LLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICF--- 120
           S ILIM+ASRCFCCGKPLSPG                              C ++ F   
Sbjct: 65  SQILIMLASRCFCCGKPLSPGGSR--------------------------ACALLLFIAC 124

Query: 121 RVFFFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFY 180
            VFF IAEICLLAGSARNAYHTKYRT+LTDTPPSCQMLRRGVFAAGAAF FFTSIVSQFY
Sbjct: 125 WVFFLIAEICLLAGSARNAYHTKYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFY 184

Query: 181 YVCYSRARESFQSYNKDTGIGMSTYK 204
           YVCYSRARE+FQSYNKD  IGMSTYK
Sbjct: 185 YVCYSRARENFQSYNKDANIGMSTYK 184

[Close]

BLAST of Lsi05G007090 vs. ExPASy TrEMBL
Match: A0A0A0L5B8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104340 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.1e-77
Identity = 161/203 (79.31%), Postives = 169/203 (83.25%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVED  AK NYCVYDSDISTGLGVGAFLFL+A
Sbjct: 5   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDPGAKTNYCVYDSDISTGLGVGAFLFLLA 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVF 120
           S ILIMVASRCFCCGKPLSPG   +  W  +L+                    I C+ VF
Sbjct: 65  SQILIMVASRCFCCGKPLSPG--GSRAWAVVLL--------------------ITCW-VF 124

Query: 121 FFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 180
           F IAEICLLAGSARNAYHTKYRT+LT+TPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC
Sbjct: 125 FLIAEICLLAGSARNAYHTKYRTLLTETPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 184

Query: 181 YSRARESFQSYNKDTGIGMSTYK 204
           YSRARESFQSY+KDTGIGMSTYK
Sbjct: 185 YSRARESFQSYSKDTGIGMSTYK 184

[Close]

BLAST of Lsi05G007090 vs. NCBI nr
Match: XP_038903364.1 (uncharacterized protein LOC120089980 [Benincasa hispida])

HSP 1 Score: 312.4 bits (799), Expect = 2.9e-81
Identity = 167/203 (82.27%), Postives = 173/203 (85.22%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA
Sbjct: 5   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVF 120
           S ILIMVASRCFCCGKPLSPG                      +W  +++   I C+ VF
Sbjct: 65  SQILIMVASRCFCCGKPLSPGGSR-------------------AWAVVLF---ITCW-VF 124

Query: 121 FFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 180
           FFIAEICLLAGSARNAYHTKYRT+LTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC
Sbjct: 125 FFIAEICLLAGSARNAYHTKYRTLLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 184

Query: 181 YSRARESFQSYNKDTGIGMSTYK 204
           YSRARESFQSYNKDTGIGMSTYK
Sbjct: 185 YSRARESFQSYNKDTGIGMSTYK 184

[Close]

BLAST of Lsi05G007090 vs. NCBI nr
Match: XP_008452269.1 (PREDICTED: uncharacterized protein 2C05 isoform X1 [Cucumis melo] >KAA0060671.1 uncharacterized protein E6C27_scaffold22G005660 [Cucumis melo var. makuwa] >TYK23801.1 uncharacterized protein E5676_scaffold580G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 1.0e-78
Identity = 162/203 (79.80%), Postives = 171/203 (84.24%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDT AKRNYCVYDSDISTGLGVGAFLFL+A
Sbjct: 5   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTGAKRNYCVYDSDISTGLGVGAFLFLLA 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVF 120
           S ILIMVASRCFCCGKPLSPG                      +W  +++   I C+ VF
Sbjct: 65  SQILIMVASRCFCCGKPLSPGGSR-------------------AWAVVLF---ITCW-VF 124

Query: 121 FFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 180
           F IAEICLLAGSARNAYHTKYRT+LTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC
Sbjct: 125 FLIAEICLLAGSARNAYHTKYRTLLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 184

Query: 181 YSRARESFQSYNKDTGIGMSTYK 204
           YSRARESFQSY+KDTG+GMSTYK
Sbjct: 185 YSRARESFQSYSKDTGVGMSTYK 184

[Close]

BLAST of Lsi05G007090 vs. NCBI nr
Match: XP_022142726.1 (uncharacterized protein LOC111012773 [Momordica charantia])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 160/203 (78.82%), Postives = 165/203 (81.28%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           LLLFTVFVFDVIAFGLAIAAEQRRSIAKIV+DTDAKRNYCVYDSDISTGLGVG FLFLMA
Sbjct: 5   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKRNYCVYDSDISTGLGVGGFLFLMA 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVF 120
           S ILIMVASRCFCCG+PLSPG        R L         +  W             VF
Sbjct: 65  SQILIMVASRCFCCGRPLSPGGS------RALAV----ILFITCW-------------VF 124

Query: 121 FFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 180
           FFIAEICLLAGS RNAYHTKYRT+ T+TPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC
Sbjct: 125 FFIAEICLLAGSVRNAYHTKYRTMFTETPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 184

Query: 181 YSRARESFQSYNKDTGIGMSTYK 204
           YSRARESFQSYNKD GIGMSTYK
Sbjct: 185 YSRARESFQSYNKDAGIGMSTYK 184

[Close]

BLAST of Lsi05G007090 vs. NCBI nr
Match: XP_004133701.1 (uncharacterized protein LOC101203051 [Cucumis sativus] >KGN56229.1 hypothetical protein Csa_009616 [Cucumis sativus])

HSP 1 Score: 298.5 bits (763), Expect = 4.3e-77
Identity = 161/203 (79.31%), Postives = 169/203 (83.25%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVED  AK NYCVYDSDISTGLGVGAFLFL+A
Sbjct: 5   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDPGAKTNYCVYDSDISTGLGVGAFLFLLA 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVF 120
           S ILIMVASRCFCCGKPLSPG   +  W  +L+                    I C+ VF
Sbjct: 65  SQILIMVASRCFCCGKPLSPG--GSRAWAVVLL--------------------ITCW-VF 124

Query: 121 FFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 180
           F IAEICLLAGSARNAYHTKYRT+LT+TPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC
Sbjct: 125 FLIAEICLLAGSARNAYHTKYRTLLTETPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 184

Query: 181 YSRARESFQSYNKDTGIGMSTYK 204
           YSRARESFQSY+KDTGIGMSTYK
Sbjct: 185 YSRARESFQSYSKDTGIGMSTYK 184

[Close]

BLAST of Lsi05G007090 vs. NCBI nr
Match: XP_023002999.1 (uncharacterized protein LOC111496714 [Cucurbita maxima] >XP_023540155.1 uncharacterized protein LOC111800609 [Cucurbita pepo subsp. pepo] >KAG6600734.1 hypothetical protein SDJN03_05967, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 298.5 bits (763), Expect = 4.3e-77
Identity = 158/206 (76.70%), Postives = 165/206 (80.10%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           LLLFTVF+FD+IAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA
Sbjct: 5   LLLFTVFLFDIIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICF--- 120
           S ILIM+ASRCFCCGKPLSPG                              C ++ F   
Sbjct: 65  SQILIMLASRCFCCGKPLSPGGSR--------------------------ACALLLFIAC 124

Query: 121 RVFFFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFY 180
            VFF IAEICLLAGSARNAYHTKYRT+LTDTPPSCQMLRRGVFAAGAAF FFTSIVSQFY
Sbjct: 125 WVFFLIAEICLLAGSARNAYHTKYRTLLTDTPPSCQMLRRGVFAAGAAFTFFTSIVSQFY 184

Query: 181 YVCYSRARESFQSYNKDTGIGMSTYK 204
           YVCYSRARE+FQSYNKD  IGMSTYK
Sbjct: 185 YVCYSRARENFQSYNKDANIGMSTYK 184

[Close]

BLAST of Lsi05G007090 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 208.0 bits (528), Expect = 7.2e-54
Identity = 107/182 (58.79%), Postives = 127/182 (69.78%), Query Frame = 0


Query: 6   VFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMASHILI 65
           VFVF++IAFGLA+AAEQRRS A++V+DT+ + NYCVYDSD +TG GVGAFLF +AS ILI
Sbjct: 10  VFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVASQILI 69

Query: 66  MVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVFFFIAE 125
           M+ SRCFCCGKPL PG    +               +VSW             +FF IAE
Sbjct: 70  MLVSRCFCCGKPLKPGGSRALAL----------ILFIVSW-------------MFFLIAE 129

Query: 126 ICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRAR 185
           ICLLAGS  NAYHTKYRT+  D PP CQ LR+GVFAAGA+F+FF +IVSQFYY  Y  A 
Sbjct: 130 ICLLAGSVENAYHTKYRTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAA 168

Query: 186 ES 188
           E+
Sbjct: 190 EA 168

[Close]

BLAST of Lsi05G007090 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 191.4 bits (485), Expect = 7.0e-49
Identity = 102/194 (52.58%), Postives = 128/194 (65.98%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           L++  VF+ D+IA GLAIAAEQRRS+ K+  D D + +YCVY +DI+T  G GAF+ L  
Sbjct: 5   LVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLLFV 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFR-- 120
           S +LIM ASRCFCCGK L+PG                              C II F   
Sbjct: 65  SQVLIMAASRCFCCGKSLNPGGSR--------------------------ACAIILFLIC 124

Query: 121 -VFFFIAEICLLAGSARNAYHTKYRTV-LTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQF 180
            VFF IAE+CLLA S RNAYHT+YR +   + PPSC+++R+GVFAAGAAF  FT+IVSQF
Sbjct: 125 WVFFLIAEMCLLAASIRNAYHTQYRKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQF 172

Query: 181 YYVCYSRARESFQS 191
           YYVCYSRAR+++Q+
Sbjct: 185 YYVCYSRARDAYQN 172

[Close]

BLAST of Lsi05G007090 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 188.7 bits (478), Expect = 4.5e-48
Identity = 108/201 (53.73%), Postives = 135/201 (67.16%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           LLL  VFVFD+IAFGLA+AAEQRR+  +I  ++    +YCVYD DI+TGLGVG+FL L+A
Sbjct: 5   LLLLLVFVFDLIAFGLAVAAEQRRTTWQISRES-RDLSYCVYDKDIATGLGVGSFLVLLA 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVF 120
           S +LIMVASRC CCG+ L+P    +  W          F  + +W             VF
Sbjct: 65  SQLLIMVASRCLCCGRALTPSGSRS--WAI--------FLFITTW-------------VF 124

Query: 121 FFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 180
           FFIA++CLLAGS RNAYHTKYR    +T PSC+ LR+GVF AGAAFI  T IVS+ YYV 
Sbjct: 125 FFIAQVCLLAGSVRNAYHTKYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVT 179

Query: 181 YSRARESFQSYNKDTGIGMST 202
            SRA++ FQ  ++D GI MS+
Sbjct: 185 LSRAKD-FQP-SRDPGIRMSS 179

[Close]

BLAST of Lsi05G007090 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 184.9 bits (468), Expect = 6.5e-47
Identity = 98/191 (51.31%), Postives = 128/191 (67.02%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           L++  VF+ D+IA GLAIAAEQRRS+ K+V D + +  +C Y SDI+T  G GAF+ L  
Sbjct: 5   LVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLLFI 64

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVF 120
           S ++IMVASRCFCCGK L PG             +  G  +            +IC+ VF
Sbjct: 65  SQVIIMVASRCFCCGKALKPGGS-----------RACGIMLF-----------LICW-VF 124

Query: 121 FFIAEICLLAGSARNAYHTKYRTVLT-DTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYV 180
           F IAE+CLLAGS RNAYHT YR +   + PPSC+++R+GVFAAGA+F  FT+IVSQFYY+
Sbjct: 125 FLIAEVCLLAGSIRNAYHTTYRRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYI 172

Query: 181 CYSRARESFQS 191
            YSRAR+ +Q+
Sbjct: 185 SYSRARDGYQT 172

[Close]

BLAST of Lsi05G007090 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-33
Identity = 78/205 (38.05%), Postives = 121/205 (59.02%), Query Frame = 0


Query: 1   LLLFTVFVFDVIAFGLAIAAEQRRSIAKIVEDTDAKRNYCVYDSDISTGLGVGAFLFLMA 60
           L+   V    ++AFG +IAAE+RRSI K ++D      +CVYDSD++TG GVGAFLFL++
Sbjct: 9   LVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFLLS 68

Query: 61  SHILIMVASRCFCCGKPLSPGEQTNMFWHRILVPKTDGFFILVSWYDIVYRCEIICFRVF 120
           S  L+M  ++C C G+PL+PG  ++  W  I        + + SW             + 
Sbjct: 69  SESLLMSVTKCMCFGRPLAPG--SDRAWSII--------YFISSW-------------MT 128

Query: 121 FFIAEICLLAGSARNAYHTKYRTVLTDTPPSCQMLRRGVFAAGAAFIFFTSIVSQFYYVC 180
           F +AE C++AG+ +NAYHTKY   L+    SC  LR+G+F AGA FI  T +++ +YY+ 
Sbjct: 129 FLVAEACVIAGATKNAYHTKY---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMY 187

Query: 181 YSRARES---FQSYNKDTGIGMSTY 203
           ++++  S    ++    + IGM+ Y
Sbjct: 189 FTKSVSSPPAHKANRSSSNIGMAGY 187

The following BLAST results are available for this feature:

BLAST of Lsi05G007090 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi05G007090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DJF4	5.0e-79	79.80	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BTF0	5.0e-79	79.80	uncharacterized protein 2C05 isoform X1 OS=Cucumis melo OX=3656 GN=2C05 PE=4 SV=...	[more]
A0A6J1CN21	5.5e-78	78.82	uncharacterized protein LOC111012773 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1KS26	2.1e-77	76.70	uncharacterized protein LOC111496714 OS=Cucurbita maxima OX=3661 GN=LOC111496714...	[more]
A0A0A0L5B8	2.1e-77	79.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104340 PE=4 SV=1	[more]

BLAST of Lsi05G007090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903364.1	2.9e-81	82.27	uncharacterized protein LOC120089980 [Benincasa hispida]	[more]
XP_008452269.1	1.0e-78	79.80	PREDICTED: uncharacterized protein 2C05 isoform X1 [Cucumis melo] >KAA0060671.1 ...	[more]
XP_022142726.1	1.1e-77	78.82	uncharacterized protein LOC111012773 [Momordica charantia]	[more]
XP_004133701.1	4.3e-77	79.31	uncharacterized protein LOC101203051 [Cucumis sativus] >KGN56229.1 hypothetical ...	[more]
XP_023002999.1	4.3e-77	76.70	uncharacterized protein LOC111496714 [Cucurbita maxima] >XP_023540155.1 uncharac...	[more]

BLAST of Lsi05G007090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27435.1	7.2e-54	58.79	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	7.0e-49	52.58	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	4.5e-48	53.73	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	6.5e-47	51.31	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	1.1e-33	38.05	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 54..171 e-value: 1.8E-21 score: 76.4
None	No IPR available	PANTHER	PTHR31769:SF56	SUBFAMILY NOT NAMED	coord: 1..203
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G007090.1	Lsi05G007090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane