Lsi05G007010 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G007010
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionmRNA splicing factor Cwf21 domain containing protein
Locationchr05: 9333139 .. 9345919 (-)
RNA-Seq ExpressionLsi05G007010
SyntenyLsi05G007010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGTTGCTTTTCGTACTAAATTTCAACGTAGCTTTGTTTTCTCAAACGTCGCTTTCTCAATTAGCAGCTGCCTTGTTGTCTTATCCTCTTTTCCAAACCGCCTTTTCCTTCTCTTGGTTGCAATTATCCTCAGCAAAATTCCCGTCAAACTGTCTCATCTTTGATAGGGTGAACTTTTTGTTTCTTCTGCCGACTTAGGAGATGAAATTCCAATGTTAGCCTCGACCTTGGCACTAAGGCCGGGTAGTATCCAGTCTATCCCTATTGCATATCATCATATTGTATTTCTTCAACTTTCCTATTTCCCTGAAAGATGAAATCTTGTGTTGCCTTTTTGTCCCTTAATCTCAAATTAACTAATTTTAATTAATTAATTAATTAATCAATATTTTGATGATAACAAACCTGCTTTTATTTATTAACAATTTGAGTGTTTTGAAGTGTCCATTGTGTAGAGCTTAAAACAATGGTTCCAACGCAATTTGAATCACTCAAATCGGAGTTCAAACGAAGAAGGATATGGCTGAAACAAGCTTTACGGAAAAATATCTGAGGTGATGACGTGGTGACCAAATCACAAAGTGGACCTACTAGAGGATGACAAGTGGAGCAATAGATAAATTACACATGGTGGGCTTTAGAGTTTTTGTTGGTTTTAAAAACAAAATGAATTTATTATTATTATATATGTTTGTGTCTAACGGCTAGTTGCTTTTAAAAGAAAATGAATTTAATATTATTTTATGTCTGTGTCTAACGGTTAGTTGAGTTTAAACCTCCACTATTAAATTAGCTTTTAACATCATCCAATTGTCCAAATTTAATGTGGTTTTCAACAACTTTAATCTTTTTTTAAACACTTCATCTTCTTCAAATTTTCACGACAACCGCCGCTTAGTGAAGGCATCCCAATCTCAACCGGAACCACCGCTTCAACCCCAAAAAGAGGAAGAAAGGGGTTTCCCCTGTGGATGTTCTTGTTGTCGTTCTATATGCCCATAACACGCTTGGTAATTCTTCTGTCCATAATCCATTTAACCCTTCAAGTTTTGTCTTCAGATTTAATTTGATTATTTGATTGACTGCTTCCACCTGCCCATTTGCTTGGGGATGTGCTGGGGATGAACGTCAATGCTCGATGTTTAGGTCTGCGCAAAATTTACTAAATGTTGTGTTGTCGAACTGCTTTCCATTATCTGTGATGATCGTTTTGGGAATCCCAAATTGACAAAAAAAAATTCTTCCAAACGAATCTGGTAACATTCTTCTCTGTTATAGTTGCAAGTGCTTCTGCCTCTGTCCATTTTGTAAAGTAATCTACAGTCACTACAGCAAATTTGGTTTTTTCCTTGCCCTGTGGTAGTGGACCGATAAGGACTATTCCCTACTGTGTAAAAGGTCATGGACTCACGATGCTAGCCAATGGTTCAGGTGGCTGTCTTGGAATTGGTTAATACCGCTGGCATGGGTCACATGCTCTCACGAAGTCTCGCGTATCTCGAAGCATCGTCGGCCAATAATAACCTTGTCTAACAATCTTGTGGCATAATGATCAAGCTCCAAAGTGGTTGTCACATACACCCCTTCATGGACTTCCTTCATCATGTATTCCGCTTCACTAGGTGTAAGACAATTTAACATGGGCAACGAATAACTTCATTTATAGAGCTTGTCGTCCTTTAAGATGTAGCATGATGCTTGCCTCTGCAATCGCCTAGCCTCTATCTTTTTCGAGGGTAATTTTCCATCTTTCAAATACTTCATTATTGGATCCATCCAAGATGAATTTCTTCTAGCCTCGCCATCATCTCTTTCTCTGACCCTAGCCTCAACCTTGGCCCTAGTAGGGTCAGCCTCGGTCTCAGTCCTAGCTGGATAAGCATTGGCCTAAAAAACTCTCAGTCTCGGTGGAATCTGGTCCTTCAATATCCATTATGTCTTCTTTGTGTACACTTGGTTTGGACAAGATTTCTATTGGTACCATCTTGCTTGTCTCTGTCTCATATGATGATGCTAACCGAGCTAAGGCGTCTGCATTAGTGTTTTGTGACCTCAGAACTTGCCTAATTTCGTGCGCTAGGAATGAGGCAAGTAATTCTTTAACCTTGGATAGATATGTCGTCATCTTCTGCTCTTAGTATGGTATTTTGTTGTTACCTACTTTACAATTAATTGCGAGTCACTTAAGATTAAGAGTTTAGAGATCCCTACTTCTTTGGCAACTCTTAACCCTGCGATGAGTGCCTCATACTCTGCCTCGTTATTTGACACTCGAAAGTTAAATTCGAGGGTGTACTCATATCGTAATCTATCCAGGGATTCTAGCAAAATCCCTGTGTCACACCCATTTTTGTTAGACGATCCATCGACAAATAGAGTCCACTGAAGATCTGTGTTCTCTAAACATAATGATAAAACCACCGTCCCAGCTTTCCCTTGATCAGCCTCAGCCTCAGCCTCGCCACCAGCCAGGGTCAGCTCTGCTAAAAATTCAGCTACCGCTTGCCCCTTCATTGACGTGTTAGGCTTATAATGAATGTCATGCTCGCTCAATTCTATTGCCCACTTCATGAGTCGTCCTAATGCCTCGGGTTTTTGCAACACTTGCTTCAAAGGGAAGTTTGTTAGAACTGTTACTCTATGTGCTTGAAAGTAGGGGCGTAATCTCCTAGCCAAAACGATTAGTGCCAGCACGAGCTTTTCTACTTGTGGATATCTAGTTTCAGCCCCCACCATTGCCTTACTTGTATGATAAATCGGGCCTTGACGACCATTTTCTTCTTTGAACAGGGCTAAACTTACTGTTGTATCAGATGCTGCTAAATAAAGTAGTAAGTCATCCCCTGGTATAGGATTGGCGATAAGTGGAATCGTACCTAAATACGCTTTCAATTCTAAAAAAGTTTTGTTGCACTCCTCTGTCCATTCGAACCAGGATCCCTTCTTCAGAATCTTAAAGAAAGGTAAACACTTGTCAGTTGTTCTACTGACAAACCTGCTTAAAGCCGCTATCCTGTCATTAAGACTTTGAAGTTGCTTGAGGTTAGTCAAAGCTGACATCTTGAGGATTGCTTGAATTTTGTCTGGATTAGTTTCTATTCCTCTCTGATGGACTATAAATCCTAGAAATTTACCTGACGTTACTCTAAAAGTACATTTGGTGGGGTTCAACCTCATCTTGTTCTTACAGAGGACCTGGAATGCTTCTTCAAGGCCGACCTCATGTTGGCTAGCTTTGACACTTTTTACCAACATATCATCTACATATACATCCATGTTTTTCCCAATTAGTAGGGCAAACATGTGATTTACCATCCTTTGGTATGTAGCTCTGACATTCTTAAGTCCAAGTGGCATGACTGTGTAATAGTATATTCCTTTATTTGTAATAAAGGAAGTCTTCTCTTGATCCGGCCCGTACATCTTAATTTGGTTGTATCCTGAATATGCATCCATGAAATTTAGCATCTCGTGATCGGCTGTCGCATCTACTAACTCATCAATCATAGGTAAAGGAAAGATGTCCTTTGGGCAAGTTGTATTGAGATCCATAAAATCGATGCACATTCACCACTTACCGTTTACCTTTTTTACCAATACCACATTAGAAAGCCATTGAGGATAATGAACTTCTCTAATGAATTCGGCTTTCAATAGATCATCTACCTGGCTTGCTATGACCTCGTTTCGCTCCTGATTAAATGTCCGTCGTTTTTGCCTTACTGATTTAAAATCTTTATCTACATTAAGTCGATGCACTACGACATTAGGATCGACTCCAGGCATATCCTCGTGTGACCAAGCGAATAAGTCAACGTTCTTTCTAAGGAACTTTATTAAATTCTGTCTCTATTTTGCCCCCATCTTAACTCCGATGTTTACTCTTTTCTCTTCTGAGGTGAGTGGGACCGATTCCAATTCCTCTGCTGACTGGCTTTCCTGGGTGGCCTCGGCCTCAACCTCTTCCCTTTGGTTGGGAAACCGCCTGTTCCATTCATCACCTAAATGATCCTGAGTTCCTTTTGATGTAGGCTCCCTTTTCTTAAAAATCCATAGGTCGCCCTTAGCCTCAGCCTCGGACTCGGCCTCAGCCCTGGTTTCAGCATTCTCCTCTCTGTCTTCGACTTGTAGCTTCAAAGCTTGTGGTTCTTTTGGTTCCAGGCGGCGGGGACTTGATTCGCTCGTTCCTAGGGCTTTGATCATCTCTTTGATCCTAGCTTCGGCCTCAGCCCTGGCCTCGACCTGAACCTTGGTCTTACTTTTAGCATCTTCTTTCATGTTCATCGCTTCGGTTTGTAGTCTCAAAACCACTAGTTCTTTCGGGTCATGGGGATCTAATTAGCCCATTCCTTTTTTCAGGGTTTTGATCATCTCTTCGGCCTCGGCCTTACTCCCTGTATCTTCATTTATGTTCCTCGTAGGGCTATGATCATCTCTTCTGCCTGGTCCTTTCATGGTTGCCTTTCTTTTAGTTGAGGCTGAAGAGCCCCATTCTTGTGGACCCATCTATGGTGGTAGTCTTGCTTTGAATCTTCTTTATCCATATTCATGTTCTTAAACCCCCAACTCATTTTTTTAGGATTTGGGGGTATTTCTTTTACTCACAAGTGAATATTATTTCCCACAGACGACGGCATCAACTGTTGATACCAAATTTTGGTCAAGAGAAAGCGCACTTGACCTCCACATGATAACAACGATAAATTTATAAATTAGGGAAGAGAGTACATGCAATACAAAGGAAAGAACTGCACACACACTCCAATGTCTAAGTCAGAAAAGAGAGTTTAATGCTAGAAGAATTCTTAGCTCGAAGTTCACTTACCTCATTTGTTCATTTTCTCCCCTATATATAGGCCGTAGTTCCTTTCCTTCTCCTTCTAGGACTTCCCTCAAGTCCTTTCGATCTCCTCTCCTTTTAGGGTTTCAGTCTTGGCTACAGATTTGACATTGAGGGTCGGCCTCGGATAAAGTGGATGGTTTGGCTTTAGACCTATATGATTCTTTTCCAAAAGCTCATATATGTCTTAGCCGGGCTTGTGCAACCAAACAGATGGGCTTGGCTTTGGCCTCGGACTTGAGGCCGACCCCAAAGTGGTCGCTTTGTCTTAGCCGGGCTCGTGCACCCAAATAGACAGGCTCGACCTCGACCTTGCTATCGAGGCCGACCCAGTCAGCTTGGCCCGGATTCGCTCTAGTCCACTCATTTGCTTGTCCTTTAGTTGCTTGAACCGCTCCTCTTTCTCGTTAGGTTATTTTTGCCCTTAATCTAGAATTAGTCATAACATTGGGAAAAACCTCTCATTTCTATTGCATGAATGAGTAGAAAAATAATAGAGAAATTAAAAGAAAACAGTAAAACTAGAAACACAAAAATTACGTGGAAAACTCCCAACTTGGAAAAAAATCACGAACAAAAAAAAAATTCACTTTGTGAAAAATTGTTACAATCACACAGAAAAATTCTCAATCCTGACCCCAATTACAAGAGCACTCTCTCAAAGCTTTTATAGTACTCACACCCTTTCTCACTCTCAAATTAGAGAATACATAAAAAGGAATTTATCTAGAGTTAGCACCCTAAGCTTAAAGTATTTCTAACTGGGACGACTTGAAACTAGAAGCATAGACTCCTTTTATAAACTTAGACTCCATCCTCATTCTTCAATTTAACTGATGTGAGACAACTGCACTTTTAATATTTTTCCAAAAATCCAACATATATTGATATTTTTACACCCTTTTGTATGTCTCTATCTCTCTTTATACCCTTTTCCCGACTCCTTGGTCCTGTGCATTGCTTTCTGTTATATTTGATTTATGTTGTTGTTCATACATAATTAAAATAAAGAAATCAAAATATATAAGAACATTATATGTATTGTAAAACACCTCGATATACCTCGCTACCAGTCCCCACTTTAATTGGCAAGGTTTGCTTCTTATTCTTTTTTTCTTTTTTTTTTTGTGGAATCATATAAGTCGCTTGTAATCTTGCAATCGACCTTGTTTTGAACTTATTTTCACTACTACAAAATTGTGATTCCATGACATTTAAGAACTGTCACAATTAAAATTTGTGATAGTTATCTTCTGTCATTGTATCCTCTGTAAAGGTATGAATAGCAATGTCAATTTTTTAAAAATGTCAAAATTAAACTTTTAACATAATTGTCAACAATGAACAATTACTGACAATGATAAACTATCATTGTCAAGTTTACTATGATATATGATACATATCATGAAATGCATGTTTAAGGCTTTATTTTGACACTTTTTCTTAACAAAAGTGGTCTTTAGCATGTTAAACCCCTCAAATTATGTTCTTAAAAGGTAAAATAGTCAAGCATAGGTCCTTTGAGTACTTAAAGTGTACTTCTATCGGTTTGGGCATGTTTTAGGGGCTTTTACATTGGTTTTTGGCTGTTTTGTAGGAATTATCTATGATGCGCCTGCATCGCCAAAACTTGATGCGGCTGCATCAAAATCCTAATTTCTAGAAGTATTGCCCAGTCAACTACAGTTGCAAATACAAAGTCTTCAGCCGTCTTTAGCCCCATATTTGACTAGGGGCTCTGAAAATGTGAAAATCGTCCCTACCTAACTCCTAAGACGCCTATAAAAGGGAGGGGAAGTCTTCTCCTCAAGGATCAATCACGAATATCAAATCCTCCAAGGTGATTTCTACCCCCAAAAATCCAGAAACTCTCCAAGAACAAAAGTTTTTCTAGAGAAATTAGAATTAGGACTTTCCCTATCCCCTGAGAACGAGTTTAGAGAGTAGGGATTTGTCCTCGAGAAAAGAGAATCCAACTGAGAGAGCTTGAGAGAGTGAGGAATCTATCTAAGGAGGGTGTTTATTGTATTTCCAGCTTTACTTTTCTGTTTTCTTCTTGTTAGTTCTATTCTTTGAACATCTACATTGTAATTATGATTTTGGAAGCAATGAAATTAACGAGCTAAATTCACTAAGGGGTTCAACTATGTGGATACCCTAGGGATTTATGGCTTGAGCATTTGCTAAAGTATCATACCTTATTTACTTGCGCATTTTCTTTGTTGATTGTAAGGATAAAAATTGTTGAGTTAAACTGATCACTTAATTTAGCAGTCTAGTAGAGTTCTAAAATACTGAGAAGGTTATGGTGTTAACGGCCCTCACAAGGGAATATGGGGTTAAAGCCTAGAAATAGGATTGTCAAGCATCATTAGAAATAAGGTACACCATAGGATAAAGAATTTGCACTGAAATTCATCTAAGGTCTAGCTAACCATAGAGATATACGATTAGCTATTTAGGATCCAAAATAAACTTGAAGCAAGGTCGAATAGGAGAAGATTTTGTTTATGAGTAAGTCCATGCCCTGGTATGATGCGGCCTCGTCGCTCAAAGTATAATGGCCTTGGGTTGAAACAGTTGTATCCCTACTTCTACCATTGATTGCATTTATTCTTTAGACATCATTCAATTCAACACTCTACACTACAAGAAAAACCACATTTCTTGACGTTTGCTATTTTAACTACTTGACATTTATATATAAAAAAAATGTCAAGTAGTAGGTGATTTTAATAAAAAAAAAAGTCAAGAAAATGTAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAAAAAAAAAAAAAAAAAAAAGCAGAGGGTTGAGGATTTTTCAAATTTTTTCACGATGATATAGACTTGACGTTTTAAAAACGTCAAGTTTAATTTTTATTTTTTAGTAGCCCAATCTACCCCACCTTTTTTTCTCTTTTAGTTTTTTCCCAAATCTTCCCTTCCCCGAAATCTTGAAACGCACTCTGAAACCTTCCCTCCTCTATGCCAAATCGTGAAATCTAGGGTTTTCCATCACGCTTCAAGAGTAACTCCACATCCCTGACATGCATCGCCACTCGCTCCATCCACGATCGTTCGCGATGCTCCAGCCGTTGGACAATGAGGTAAGGTCGCGTTGTCTCTCTCTTTCTCCTTTCCTTTTCTCTCACTCTCTCGGCCATCTCGCCTCTCTTCTCCAGTTCAAGGTCGCGTCGTCTCTAAACTCGTCCTCGTTGTTGTTGGTTACTGGAAGATCGAACAAGCCCTAGCAATTTTTCTAGCCTATCTTCTTCATTGTTCCTCTAAAATCGAACAAGCCCTAGCAATCTTTCTATCTCTAATTTGGTTTGATTGGTTAGATTTAGTACTTTGAGAAATACTTTGATGATATCAATGACTACAGGTCTGTAATTTCTCTTCCTCCTCTGATTTTTTATTCAGAATGTTGTTATTTTCATCAGCATGGTTTGATTCTCATGGTTTTTGTTGATGTTTGTTGTAGGCATGTGGTGCTTCCTCCTAAAGTGGCAAAACTCCTCCCAAGAATTACCTTCTTTTTGAAAATAAATGGCAACCAATTGGTATTCAACAAAGCCATGATTTGAATTCAAGTAAGTTGCTATGGTAAGATATTAGGTAGCTATGAGCAATTTTCAAGTATGTTACTCTGAGTTTCATCGACATATTAAAAGTATCAAAACAAATGTTTTCTTCTATTATGAGATTTCAAATTTGTTGCAGCTGAGCTTTTGATTCAGTGTTCAACTTCCTTGTCCCATGGGTTGGTTAATGGAGAGGATATTGTTAAAATTGAAAGAGTTCTTTGTTTTAGAATTGAAAAGGATGTAAACTATTACAAATTGAAACTGTAGGTTAGTTGCTTGTTATTATCTTCATTTCATCTTTTGTTGCAATGATAATCCTTCTTGTGCAGTATTTTGAAAGCATGAAGCATATTAAGCTGCAATAACCTTTTTTTGGGAGTTTAATCCTTGAGGCAAAACCAACATACTTCTACATTGTGTGGACTTAAACCGAGGTGAAGTGTCATGTCATATAACATGTGGTTTTAACTTAGTCTAAAAGTTTATTTACAAATCATTGTTCTAATTCTTGCAATTTGGTTCCAATTTAATTTTTGAGTTCAACATGGTTGAGGTATATATCTTAATTAGTTGAATTATATTTAGCTTGATAATTTTTGTACTTTTAGAACTACAACGATCATCAGTGCTCTCCTCATCTATGCTCTCTCAAACTCTCTTTTATTTCGTTGTCAACTCTCACTCTCGGTTGCTCTTCAAGTGCGAAGTGTGTGTATATTTGAAAATGTTATTTTGAGTTTAATGGTTTATGAGATGAAATTTTGCTTCTGTTATGATATGTGAGGTTTAGGATTATTTTTTATTTATTTTTTTGTTTCCAGGTTCTGATATTCGATTTCTCTTTTAATTATTTTGGTGCTTGAGAGTACTTTTTTCCTTCTGTGTAATTTTTAGTTATGTGATTTGGGTAATTGTTTATTACTTTTTCTTATATTGAATGATTTTGAATGATTCAGTAGATCTTGATTGGATTCTTTTTAGGTTGGTGAAGCAGGGCTATGTATAATAGTATTGGATTGCAAACTCCTATAGGATATGGCACTAATGGCTACATCCAGATGAACAAGTTTTTTGTGAGGCCAAAGACTGGAAAGATTGCTGAAAGGATTAGAGGATACAATCAGGGCACTACTGGAGTTTCTAAGTAACCTAATAGAGACATTTGCGAACATATTGAACTCCAACTTGTCATACTTAAGGACAAGCTCATTGACCAAGGGTATACAGCGGATGAAGTTTTTGAAAAGTTGGGGGAGGTTCATGAGACTTTGGAAGCTGCTTCAAGTTCTAAGGAAAAAGATGGACCTTCTGCCATTGTAACTAAAGTGGTAGGGTAGACTTTCAATCATGTTTATTCAGTGATTTTGTTATATTTCCTAATAAATCTTGTTTTTCCATTATTTCGGTTGGATTTCAAATTTTAGCTTGCTTGTGATGATTATAAGCATTTCCCTTTTTAATCTAATGTGTCCAAAAATTGAAGAAAATTGAACACCAACCTACTTGCTCACTATTTAATAGTTCCAAAATTAGAGTAGATTTCTAAATTCCTTTAGCCATTACTAGTTAACAAAGTATGCATAGTTTTTTGTTTCTCACACTAATTTAAGTACAATGTCTCAAGAACTGAAGTTTTGTTAATTGAAGTTTGGGGAAGGGGGGGATTGCATAAAATTTATTTGAATTTGTTAATGTTATTAGGTTGGTTTTAAAGTTGTTATATGGGTAAATGCATAGTAATGTTTAAGTCCAAGTTGAGTTTTAAGTTTTATATTGAGTTTAAGATTAGTATATTAATTTTGAAATTGATATATGGATAAATGAATTGAGTTTGAGATTGGTATATGGTTAACTTGTGATTATTTCTGGCATGGGTATTTATATTTCCATATAGATTCTTGTGGTTAAGTTTGACATCTACAATTTATTTTTTAGACGTTATGGTTTGCTTAGATTAAATGGATGTGGTAAATCTACACTTCATGCGGTAATAGGTTCTTGGATTAAATGGATGTCATAAATCTACACTTATTTGAAGCTTGATGTTTGTAGTTTTGGATTGTTATAAAGTGTTTCGAATAAAGCTTAAGGCTTGTACTTCTTATTGATTTCCACTTTTTTGTTTGGTAAATTTTGTTTAGCTTATTTGCAGGACTTTTTGTTCATTTATTGCAATTCTAGAGGTCCAACCCTTGGTTTTAATACTCTTCTCTTTTCATTTGTAGATTAGTTGAGGATAACATCTGAAGAGACTTTGATCAGTTTGGAGCTACCTAAGAGTGTTGTGCTTGGAGGAGGGTGTGGTCTCTCTCTTTTAATATTATATATGCTTTGTGTTTTATGATAATGATCACAACTCCTTTTCCATTTTTAGGTGATTTTGATAGTTATGGAAATGTAATTTTTGAAATTGTTCATATGGAATTGACTGTTGGGATTATGTTTGTGATGTGCTTTTTGGAAATGTTCATATGGGGTTGTCCATATTCTTCTAACTTAGAAAATCCTGTAGTGGAGTTATAAGTTATATGTTGACAATGTTAAAGAAGTGATCTTTTCTTTATAAAGGTATTGGAGGAAATTTTGGTTGACAATTTTGCAAATGTGTGTGGTTGTTTATTTGGTTTGATGAATATTTTTCCTTTATATATGTATATTGTTTATAATGGTATATTTGAGGAAAGTTTGGTTGGTAAGTTTGTAAATGTGTGTGGCTGTTTATTTGGGTTTATGTTTGTCTTTTTTTATATTCAATGCTATTATTGGACCAAAATACAGGAGCAATTTATAGTTAAACATTTATAATACAAATATTTTTTTTTAAAAAAAAAACCACAAACAGGCTTGACAAGTTAAATTTGTCAAGATTATAGATACATTTGACATTTTATCCTTGTCAAGAACACCCATATGCTTGACATTTTTTGCATATCAAGTTAAGTGTACTTGACATTTTTAACATATCAACTATAAACCATCTTGACGTTTTTTCCTAGTCAAGAACCTCATATTCTTGACATTTCAAAAATGTCAAATGTCACTATTCTTGACGTTTATACTATGTCGAGAACTCCGACATTCTTGACACAGGCTTGCACAGTCACACTTGATATTGAAAAAACATCAATAAACATTATTTTTCTTGTAGTGCTAATTTACTCTAGTTACTTTAAGTCACTTGATTACATGGTTTAAAATAAACCAAATTGGATATCTAGTCTCATGGGATTCGACTCTTGGAATACTCCAAATTTAGATAGTGTATGCTTGAACTTAGACCACTTCTATCTATATTTTTATCACACATACACTTTTGGTCTTTCTACATGTTATCATTGTCATTAATTGTTAAACAATCATTGTCATTTTTTCCTTTGCCATTGCTAAACAATCGAAGAAATCACAACCATCTTTAAAAATTTACTGTGAAGGGATTGACAATCGTTTTTGTGATGAACAAGTTCCTGAAATGAAGGGATTGATAGTTTTTAATTTTTAAAATGAGTGGGTTCCTGAAACGAAGGTGGAAGGAAGTTAATTACGATTAGGATGAGGTTTACATGGGGAGGAAGTTGTAAGGTTTTTGGGTTTTTGGATCCAAAATGAACTGATAGTTTACCAATCTAGAAAAGGTTTGTGGGGTTACATCAGTTTTAAATTTTTGCATGAGTATAATGGTTACTTTTTTATTAAAAGTAGTGTAGTATTCATTCTTCAAGTCTCCTTAA

mRNA sequence

ATGGGATATGGCACTAATGGCTACATCCAGATGAACAAGTTTTTTGTGAGGCCAAAGACTGGAAAGATTGCTGAAAGGATTAGAGGATACAATCAGGGCACTACTGGAGTTTCTAAAGACATTTGCGAACATATTGAACTCCAACTTGTCATACTTAAGGACAAGCTCATTGACCAAGGGTATACAGCGGATGAAGTTTTTGAAAAGTTGGGGGAGTATTCATTCTTCAAGTCTCCTTAA

Coding sequence (CDS)

ATGGGATATGGCACTAATGGCTACATCCAGATGAACAAGTTTTTTGTGAGGCCAAAGACTGGAAAGATTGCTGAAAGGATTAGAGGATACAATCAGGGCACTACTGGAGTTTCTAAAGACATTTGCGAACATATTGAACTCCAACTTGTCATACTTAAGGACAAGCTCATTGACCAAGGGTATACAGCGGATGAAGTTTTTGAAAAGTTGGGGGAGTATTCATTCTTCAAGTCTCCTTAA

Protein sequence

MGYGTNGYIQMNKFFVRPKTGKIAERIRGYNQGTTGVSKDICEHIELQLVILKDKLIDQGYTADEVFEKLGEYSFFKSP
Homology
[Close]
BLAST of Lsi05G007010 vs. ExPASy TrEMBL
Match: A0A6J1BPI2 (protein starmaker OS=Momordica charantia OX=3673 GN=LOC111004608 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.3e-18
Identity = 56/82 (68.29%), Postives = 62/82 (75.61%), Query Frame = 0 

Query: 2  GYGTNGYIQMNKFFVRPKTGKIAERIRGY--NQGTTGVS----KDICEH-----IELQLV 61
          G GTNGYIQ NKFFVRPKTGK+AE  RG+  +QGT GVS    KDI EH     IEL+LV
Sbjct: 12 GSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEHDRKRQIELKLV 71

Query: 62 ILKDKLIDQGYTADEVFEKLGE 73
          IL+DKLIDQGYT +EV EKL E
Sbjct: 72 ILEDKLIDQGYTDEEVSEKLKE 93

[Close]
BLAST of Lsi05G007010 vs. ExPASy TrEMBL
Match: A0A6J1K7B6 (dentin sialophosphoprotein-like OS=Cucurbita maxima OX=3661 GN=LOC111492317 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.5e-18
Identity = 54/82 (65.85%), Postives = 61/82 (74.39%), Query Frame = 0 

Query: 2  GYGTNGYIQMNKFFVRPKTGKIAERIRGY--NQGTTGVS----KDICEH-----IELQLV 61
          G GTNGYIQ NKFFVRPKTGK+AE  RG+  +QGT GVS    KDI EH     IEL+LV
Sbjct: 12 GSGTNGYIQTNKFFVRPKTGKVAENTRGFDEDQGTAGVSKKPNKDILEHDRKRQIELKLV 71

Query: 62 ILKDKLIDQGYTADEVFEKLGE 73
          IL+DKL DQGYT DE+ +KL E
Sbjct: 72 ILEDKLTDQGYTEDEISQKLKE 93

[Close]
BLAST of Lsi05G007010 vs. ExPASy TrEMBL
Match: A0A6J1ESM6 (dentin sialophosphoprotein-like OS=Cucurbita moschata OX=3662 GN=LOC111436144 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.5e-18
Identity = 54/82 (65.85%), Postives = 61/82 (74.39%), Query Frame = 0 

Query: 2  GYGTNGYIQMNKFFVRPKTGKIAERIRGY--NQGTTGVS----KDICEH-----IELQLV 61
          G GTNGYIQ NKFFVRPKTGK+AE  RG+  +QGT GVS    KDI EH     IEL+LV
Sbjct: 12 GSGTNGYIQTNKFFVRPKTGKVAENTRGFDEDQGTAGVSKKPNKDILEHDRKRQIELKLV 71

Query: 62 ILKDKLIDQGYTADEVFEKLGE 73
          IL+DKL DQGYT DE+ +KL E
Sbjct: 72 ILEDKLTDQGYTEDEISQKLKE 93

[Close]
BLAST of Lsi05G007010 vs. ExPASy TrEMBL
Match: A0A5A7VCH8 (Dentin sialophosphoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003050 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.2e-17
Identity = 54/82 (65.85%), Postives = 60/82 (73.17%), Query Frame = 0 

Query: 2   GYGTNGYIQMNKFFVRPKTGKIAERIRGY--NQGTTGVS----KDICEH-----IELQLV 61
           G GTNGYIQ NKFFVRPKTGK+AE  RG+  +QGT GVS    KDI EH     IEL+LV
Sbjct: 301 GSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEHDRKRQIELKLV 360

Query: 62  ILKDKLIDQGYTADEVFEKLGE 73
           IL+DKL DQGYT  E+ EKL E
Sbjct: 361 ILEDKLNDQGYTEKEISEKLRE 382

[Close]
BLAST of Lsi05G007010 vs. ExPASy TrEMBL
Match: A0A1S3BBX0 (dentin sialophosphoprotein-like OS=Cucumis melo OX=3656 GN=LOC103488247 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.2e-17
Identity = 54/82 (65.85%), Postives = 60/82 (73.17%), Query Frame = 0 

Query: 2  GYGTNGYIQMNKFFVRPKTGKIAERIRGY--NQGTTGVS----KDICEH-----IELQLV 61
          G GTNGYIQ NKFFVRPKTGK+AE  RG+  +QGT GVS    KDI EH     IEL+LV
Sbjct: 12 GSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEHDRKRQIELKLV 71

Query: 62 ILKDKLIDQGYTADEVFEKLGE 73
          IL+DKL DQGYT  E+ EKL E
Sbjct: 72 ILEDKLNDQGYTEKEISEKLRE 93

[Close]
BLAST of Lsi05G007010 vs. NCBI nr
Match: XP_038884695.1 (dentin sialophosphoprotein-like [Benincasa hispida] >XP_038884696.1 dentin sialophosphoprotein-like [Benincasa hispida])

HSP 1 Score: 102.4 bits (254), Expect = 1.8e-18
Identity = 56/82 (68.29%), Postives = 63/82 (76.83%), Query Frame = 0 

Query: 2  GYGTNGYIQMNKFFVRPKTGKIAERIRGY--NQGTTGVS----KDICEH-----IELQLV 61
          G GTNGYIQ NKFFVRPKTGK+AE  RG+  +QGT GVS    KDI EH     IEL+LV
Sbjct: 12 GSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEHDRKRQIELKLV 71

Query: 62 ILKDKLIDQGYTADEVFEKLGE 73
          IL+DKLIDQGYT+DE+ EKL E
Sbjct: 72 ILEDKLIDQGYTSDEISEKLRE 93

[Close]
BLAST of Lsi05G007010 vs. NCBI nr
Match: XP_022131365.1 (protein starmaker [Momordica charantia] >XP_022131366.1 protein starmaker [Momordica charantia])

HSP 1 Score: 100.1 bits (248), Expect = 8.8e-18
Identity = 56/82 (68.29%), Postives = 62/82 (75.61%), Query Frame = 0 

Query: 2  GYGTNGYIQMNKFFVRPKTGKIAERIRGY--NQGTTGVS----KDICEH-----IELQLV 61
          G GTNGYIQ NKFFVRPKTGK+AE  RG+  +QGT GVS    KDI EH     IEL+LV
Sbjct: 12 GSGTNGYIQTNKFFVRPKTGKVAESTRGFEEDQGTAGVSKKPNKDILEHDRKRQIELKLV 71

Query: 62 ILKDKLIDQGYTADEVFEKLGE 73
          IL+DKLIDQGYT +EV EKL E
Sbjct: 72 ILEDKLIDQGYTDEEVSEKLKE 93

[Close]
BLAST of Lsi05G007010 vs. NCBI nr
Match: XP_023545728.1 (protein starmaker-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17
Identity = 54/82 (65.85%), Postives = 61/82 (74.39%), Query Frame = 0 

Query: 2  GYGTNGYIQMNKFFVRPKTGKIAERIRGY--NQGTTGVS----KDICEH-----IELQLV 61
          G GTNGYIQ NKFFVRPKTGK+AE  RG+  +QGT GVS    KDI EH     IEL+LV
Sbjct: 12 GSGTNGYIQTNKFFVRPKTGKVAENTRGFDEDQGTAGVSKKPNKDILEHDRKRQIELKLV 71

Query: 62 ILKDKLIDQGYTADEVFEKLGE 73
          IL+DKL DQGYT DE+ +KL E
Sbjct: 72 ILEDKLTDQGYTEDEISQKLKE 93

[Close]
BLAST of Lsi05G007010 vs. NCBI nr
Match: XP_022997381.1 (dentin sialophosphoprotein-like [Cucurbita maxima])

HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17
Identity = 54/82 (65.85%), Postives = 61/82 (74.39%), Query Frame = 0 

Query: 2  GYGTNGYIQMNKFFVRPKTGKIAERIRGY--NQGTTGVS----KDICEH-----IELQLV 61
          G GTNGYIQ NKFFVRPKTGK+AE  RG+  +QGT GVS    KDI EH     IEL+LV
Sbjct: 12 GSGTNGYIQTNKFFVRPKTGKVAENTRGFDEDQGTAGVSKKPNKDILEHDRKRQIELKLV 71

Query: 62 ILKDKLIDQGYTADEVFEKLGE 73
          IL+DKL DQGYT DE+ +KL E
Sbjct: 72 ILEDKLTDQGYTEDEISQKLKE 93

[Close]
BLAST of Lsi05G007010 vs. NCBI nr
Match: KAG7029765.1 (Serine/arginine repetitive matrix protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17
Identity = 54/82 (65.85%), Postives = 61/82 (74.39%), Query Frame = 0 

Query: 2  GYGTNGYIQMNKFFVRPKTGKIAERIRGY--NQGTTGVS----KDICEH-----IELQLV 61
          G GTNGYIQ NKFFVRPKTGK+AE  RG+  +QGT GVS    KDI EH     IEL+LV
Sbjct: 12 GSGTNGYIQTNKFFVRPKTGKVAENTRGFDEDQGTAGVSKKPNKDILEHDRKRQIELKLV 71

Query: 62 ILKDKLIDQGYTADEVFEKLGE 73
          IL+DKL DQGYT DE+ +KL E
Sbjct: 72 ILEDKLTDQGYTEDEISQKLKE 93

[Close]
BLAST of Lsi05G007010 vs. TAIR 10
Match: AT3G49601.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf21 (InterPro:IPR013170); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 2.6e-12
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0 

Query: 2  GYGTNGYIQMNKFFVRPKT-GKIAERIRGY--NQGTTGVSKD----ICEH-----IELQL 61
          G GTNGY+Q NKFFVRP+  GK  +  +G+  ++GT G+SK     I EH     I L+L
Sbjct: 12 GSGTNGYVQTNKFFVRPRNGGKPVKGGKGFEDDEGTAGLSKKPNKAILEHDRKRQIHLKL 71

Query: 62 VILKDKLIDQGYTADEVFEKLGE 73
           IL+DKL DQGY+  E+ +KL E
Sbjct: 72 AILEDKLADQGYSDIEIAQKLEE 94

The following BLAST results are available for this feature:
BLAST of Lsi05G007010 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi05G007010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BPI24.3e-1868.29protein starmaker OS=Momordica charantia OX=3673 GN=LOC111004608 PE=4 SV=1[more]
A0A6J1K7B69.5e-1865.85dentin sialophosphoprotein-like OS=Cucurbita maxima OX=3661 GN=LOC111492317 PE=4... [more]
A0A6J1ESM69.5e-1865.85dentin sialophosphoprotein-like OS=Cucurbita moschata OX=3662 GN=LOC111436144 PE... [more]
A0A5A7VCH86.2e-1765.85Dentin sialophosphoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A1S3BBX06.2e-1765.85dentin sialophosphoprotein-like OS=Cucumis melo OX=3656 GN=LOC103488247 PE=4 SV=... [more]
BLAST of Lsi05G007010 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038884695.11.8e-1868.29dentin sialophosphoprotein-like [Benincasa hispida] >XP_038884696.1 dentin sialo... [more]
XP_022131365.18.8e-1868.29protein starmaker [Momordica charantia] >XP_022131366.1 protein starmaker [Momor... [more]
XP_023545728.12.0e-1765.85protein starmaker-like [Cucurbita pepo subsp. pepo][more]
XP_022997381.12.0e-1765.85dentin sialophosphoprotein-like [Cucurbita maxima][more]
KAG7029765.12.0e-1765.85Serine/arginine repetitive matrix protein 2, partial [Cucurbita argyrosperma sub... [more]
BLAST of Lsi05G007010 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G49601.12.6e-1249.40FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36562:SF5SERINE/ARGININE REPETITIVE MATRIX 2coord: 4..73
NoneNo IPR availablePANTHERPTHR36562SERINE/ARGININE REPETITIVE MATRIX 2coord: 4..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G007010.1Lsi05G007010.1mRNA