Lsi05G006970 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G006970
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein CHROMOSOME TRANSMISSION FIDELITY 7
Location	chr05: 9247555 .. 9252214 (+)
RNA-Seq Expression	Lsi05G006970
Synteny	Lsi05G006970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAATGAATCTTCTTCTCCTGAACTCGGAATAGAAGTCTTTCCAATCATGCAATCCAAAATCAGTGCCTTCTTCAAACCCTCTTCTTCGATATCATCCCACAGGTCGTCGGAACCCTTGAATTCAAACGCCGATGACAACGACTATGGAGCATTAAAGATCTGGGAAAAGGCAGAGCACCAATTCATCAACACGTATAAGCGAAGGTATCCCAGATTCTTCTCTTCTTCTTCTTCTCTTATAAATTGTAATTGGTTGTTATTGATGAAATCCCTTTCGTTTAACTCTTAAGGAATGTGAAAAGTCCACAACGTGTGGACTCGGAGACAAAAATTCCAATTCTAGACGATTCGTCTGCAAAAGCAGAATTGGCTTCATCGACCAAAATTGTGGTGAAGAACAAGAAAAGAAGCTACACTCAGTACCATTTACTTTTCGGTCAGTCTGATTTTTTGCTCCATTTTTGTTCCACATGTGGAATCAAATATGCTCGTGGGGATATAGACGATGAACAATCTCATAAAGCATTTCATAAGAAGTACACTTGTGGAATCCAATTTAAGGTAAACACCCAACGTTTTATTTTCTCTGGTTTCTTTCTGGGTCTCTTTCTAATTGCATTTGTGCACCATTGGTAGGGATGGACTCACGAAAGGGTTATCGATATTCCCTCCGTTGAAGGCGGCCGTATTTTGTTGGTGTTGGATTCTGACCCTTCTGCTCACAAGAACAAGGTCCAAACTCTATTAAATTTGGACTGTTGAAGTGAAGTACTTAGTGAAATTTAGTTATCTTGAGTTAATCTAAAATTTTTCTTAAATCTTTATAAATTTTGTTATACTAGAAGGTTGAAGAGACTGGGAAATACTCAAAAAGATGTATGTACAATCAAAGATTAGACGGGTGTTCTTGTTGCCAAGGTAAAAATGACTGCTAATAAGATGTTTCCTCTTAAATTTACATGTGGTCAAATATTTTGCTTTAGTAGCATATTAAAGGATCCATCCTGGCTTTGGCGATATGGTCACTTGAATTTCGGATCGCTATCTCATTTGTGCAAAAATCATATGGTGAGGGGCATACAAAATATCAACCATGAGACAGATATTTGTGAATTGTGTATACTTGCAAAATATCATAGAGATTCATTTCCAACTGGGAAAGCTTGGAGGGCCTCCAGACCTCTTGAGTTGATTCATATAGATTTGTGTGGTCCCATGGGTACAATATCAAATGGAGGTAATCGATATTTTATAACCTTCATTAATGACTTCAGTAGAAAGTTGTGGATTTATCTTTTGAAAGAAAAATTTGAAGCATTTGAATGTTTTAAATCTTTCACAGTTTTAGTTGAGAATCAAAGTGGTCATAAGATAAAAACTTTGAGATCTGATTGTGTTGGAGAATATATAGTTTTTGATAAATTTTTCAAGGAGCAAGGAATTCATCATCAAATGACAGCTCGAATGACTCCACAACAAAATAGAGTTGCAGACAGAAAGAATAGAACGATCATGGAGATGGCGAGAAATATGCTAAAAGCAAAAAAGATGTCAGATGAGTTTTGGGGAGATTCTGTTGCATGTACTACTTATATTTTGAATCGAGCTCAACCAAGAGTGTTCCAGGTATGACTCCTTATGAAGCATGGTGTGGTGAGAAGCCATGTGTTAGTCACTTGAGAGTTTTTGGGAGTATAGCTTATTCTCACATACCAAATCAGTTAAGAGGCAAGCTTGATGATAAATCTGAAAAATGTATTATGGTAGGCTATAGTGAAAATTCTAAAGCTTATCGGTTGTATAATCCTGTGTGAAGAAAGATTATTATCAGCAGGGTTGTGATTTTCCATGAAGATGAATCCTGGAGCTACGATGCTGCTAGTGAAGCTGAAAGTCCATTTCATGTTAGCATGGATGAGAATGAAGATGCTCAAGCCTCAGAGAAAGTAGAAATTCAAGCAGTAGCATCATCCTCGTCTGCAGTGCCATCATCCACAAGTAATGATGAAATCTCACCAAGGAGAATGAGGAATATTCAAGATATTTATAATTCTAATAGCAGAATTGACGATGATCATGTTGCTAATTTTGCATTATTTGCTGGTGTTGATCCTATAACTTTTGATGAGGCCATCCACGATGAGAAATGGAAGATTGCAATGGATCAAGAAATTGATGCGATAAAAAGAAATGAAACATGGGAGTTGATGGAGCTTCTTGTAAACAAAAAGGCTCTTAGAGTAAAATGGGTATACAGAACAAAGTTGAAGTCAAATGGTGAAGTTGAAAAATACAAGGCAAGACTTGTTGTAAAAGGTTACAAGCAGGAATATGGTGTAGATTATGAAGAAATATTTGCTCCTGTGACGAGAATGGAAACCATCTTATTGATTTTATGTTTAGCTACTCAAAATGGATGAAATGTTTATCAAATGGATGTAAAATCCGCTTTTTTGAATGGATACTTGAAGGAAGAGATATTTGTTGAACAACCTTTGGGTTATGTGTGAAACAAGAAGAAAAAGAAAAGGTGTACAAGTTGAAAAAGGCCTTGTATGGATTGAAGCAAGCTCCACGAGCTTGGTACAGTCGCATTGACAGTTTCTTTCTGAAGACAGGATTTCAATGGTGTCCATATGAGCATGCACTCTATGTCAAAGAAGATAAGTATGGCAAATTTCTTATCGTTTCACTTTACGTTGATGATTTACTTTTCACTGGAAATGATAAATTGTTGTATGATGATTTTAAGAATTCCATGAAAAAAGAATTTGAAATGAGTGATATGGGTCTCATCCACTATTTTCTCGGAATTGAAGTTGATAAAAAAGATGGAGAGATTGTCATCTCACAACAAAAGTATGTTCGTGGTTTGTTGAAAAATTTTCGGATGGAAAATACTTTTCCTTGCAACACTCCATGGATGCAAATTTGAAATTGAGCAAAGATGACATTGGAGAAGAAGTTGATCCAAGTTTGTATCGAAGTTTAGTTGGAAGCTTTATGTACTTGACTGCAACAAAACTTGATATTTCATTTGCTGTAAGTATGTTAAGTAGATTCATGACAAGCAAAAAAAAAAAGTCACTGGAAAGCAGGTAAAAGAGTTCTTCGTTACATTTGTGGAACCATTAATTTTGGAATTTATTACAAGAAAGTTCCAGAATCAGTATTGTTTGGCTTTTGTGATAGTGATTGGGGTGGTAATGTAGATGATAAAAAAAGTACATCGAGTTATGTTTTTAGCATCGGTTCATGTGTTTTTTCATGGAGTTCAAAGAAGCAGCTTGTTGTTGCTCTTTCTACCACTGAAGTATAATATATCTAGATCTACAGCTGCATGTCAAACTTTATGGCTTAGATGGATGTTGAAGGAATTGAAGTGTACTCAAAGAAGTGAGAATGTTTTATTTTGTGATAATGGATCTGCTATAGCATTATCAAATAATCCAGTTTTTCATGGAAGAAGCAAGCATATTAGAATCAAGTAGCATTTTATCAGAGACTTGGTTAATGATGGAGAAGTGATGGTGAAATATTGCAAGACTCAAGATCAAGTGGCTGACATTTTTACAAAGGCATTGAAGTTTGATTTGTTTGTAAAGTTCAGAGAAAAACTTGGAGTTGCTCAAGTCTAGATTAAGGGAGGATGTTGAAATTAAATTAATCTAGAACTCTTAATACATGAATTACATTATTACATACATGAATAGTTGAGATTCAAGAAATAGATACATGAATTACCAAATACATTGATGAATGTTCATATATTGGTGAAGAGTCACATGTATTGATATTTATTGTTGATGTTTTTTAATTTCCTTTTCTACTAGTATAAATATGTGTAGGATTTTTCATTTGTAAGAAGAAAGAAAGAAAAAAAAGGTTTACAAGAAATATTTAAGTTCAATTCTACTAAATTGTGTGAGTAAGAGGACAATCTTCTTCTCTTGTCTCTTGATTTATATTGCGTGGGTTTACTATGTTTTCAACAACTCTCGCTCACTGTCGCTCTCGCTCACCGAAACTGGTCACGTCGGAGTTGCTCGTGTGAGAGAAGAAGTAGAAAAAGTGGCAGAATAAGAAGAAGGAGAAGAATAAGAGACAAGAAGGAAAAGAAGAAGAGACGGGAAGGAAAAGAAGAAGAAAAAAAAAAAGAAAAAGGAAAAAAGAAGAGGAGTCTGGGAGTCTTGAAAAAAGAAGAAAAAAAATAAAAGGAAATACTGTAAATATATATAGTCATGACATCATCTAAAGGTTATTTGACATTTTTTAAAAAAAATCAAGTCATTTATCATTTCGGGCTTTTAAAATAGGTGTTTTATGCCATTATTTTACATTTATTTGAATTATTTGTCTAATAAAATCATAACCTTTTAATTTCATATCTCAATAATTTTTTTTTTATTTTTTTTATAAAAAAATATCTAATACGTTAAAGACTTGTTCAACATAAAATTGAAAATTCTGAAAATGATTCCACGTGAAAAGTTAATGGACCAAATTCAATACCAATTCAAGTTAACGGATCTGTTAGAAATGTCAACTTTCTTTTGATGTAGTATATTTATTTTACTTTTTGTTATGTAATTAATATTTACTATAATTTGATAGTTTTGTACAAAAACAATGCAACATCTATACGTCTAGCTTAA

mRNA sequence

ATGCAGAATGAATCTTCTTCTCCTGAACTCGGAATAGAAGTCTTTCCAATCATGCAATCCAAAATCAGTGCCTTCTTCAAACCCTCTTCTTCGATATCATCCCACAGGTCGTCGGAACCCTTGAATTCAAACGCCGATGACAACGACTATGGAGCATTAAAGATCTGGGAAAAGGCAGAGCACCAATTCATCAACACGTATAAGCGAAGGAATGTGAAAAGTCCACAACGTGTGGACTCGGAGACAAAAATTCCAATTCTAGACGATTCGTCTGCAAAAGCAGAATTGGCTTCATCGACCAAAATTGTGGTGAAGAACAAGAAAAGAAGCTACACTCAGTACCATTTACTTTTCGGTCAGTCTGATTTTTTGCTCCATTTTTGTTCCACATGTGGAATCAAATATGCTCGTGGGGATATAGACGATGAACAATCTCATAAAGCATTTCATAAGAAGTACACTTGTGGAATCCAATTTAAGGGATGGACTCACGAAAGGGTTATCGATATTCCCTCCGTTGAAGGCGGCCGTATTTTGTTGGTGTTGGATTCTGACCCTTCTGCTCACAAGAACAAGTGCCATCATCCACAATATATTTATTTTACTTTTTGTTATGTAATTAATATTTACTATAATTTGATAGTTTTGTACAAAAACAATGCAACATCTATACGTCTAGCTTAA

Coding sequence (CDS)

ATGCAGAATGAATCTTCTTCTCCTGAACTCGGAATAGAAGTCTTTCCAATCATGCAATCCAAAATCAGTGCCTTCTTCAAACCCTCTTCTTCGATATCATCCCACAGGTCGTCGGAACCCTTGAATTCAAACGCCGATGACAACGACTATGGAGCATTAAAGATCTGGGAAAAGGCAGAGCACCAATTCATCAACACGTATAAGCGAAGGAATGTGAAAAGTCCACAACGTGTGGACTCGGAGACAAAAATTCCAATTCTAGACGATTCGTCTGCAAAAGCAGAATTGGCTTCATCGACCAAAATTGTGGTGAAGAACAAGAAAAGAAGCTACACTCAGTACCATTTACTTTTCGGTCAGTCTGATTTTTTGCTCCATTTTTGTTCCACATGTGGAATCAAATATGCTCGTGGGGATATAGACGATGAACAATCTCATAAAGCATTTCATAAGAAGTACACTTGTGGAATCCAATTTAAGGGATGGACTCACGAAAGGGTTATCGATATTCCCTCCGTTGAAGGCGGCCGTATTTTGTTGGTGTTGGATTCTGACCCTTCTGCTCACAAGAACAAGTGCCATCATCCACAATATATTTATTTTACTTTTTGTTATGTAATTAATATTTACTATAATTTGATAGTTTTGTACAAAAACAATGCAACATCTATACGTCTAGCTTAA

Protein sequence

MQNESSSPELGIEVFPIMQSKISAFFKPSSSISSHRSSEPLNSNADDNDYGALKIWEKAEHQFINTYKRRNVKSPQRVDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQSDFLLHFCSTCGIKYARGDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILLVLDSDPSAHKNKCHHPQYIYFTFCYVINIYYNLIVLYKNNATSIRLA

Homology

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BLAST of Lsi05G006970 vs. ExPASy Swiss-Prot
Match: A7UL74 (Protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Arabidopsis thaliana OX=3702 GN=CTF7 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.7e-29
Identity = 73/175 (41.71%), Postives = 105/175 (60.00%), Query Frame = 0


Query: 18  MQSKISAFFKPSSSISSHRSSEPLNSNADDNDYGALKIWEKAEHQFINTYKRRNVKSPQR 77
           MQ+KI++FFKPSSS S   S   + ++ DD     L +WE   +  +NTY+RR+  + + 
Sbjct: 1   MQAKINSFFKPSSSSSIAAS---VTTDTDD----GLAVWENNRNAIVNTYQRRSAITER- 60

Query: 78  VDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQSDFLLHFCSTCGIKYAR 137
             SE     ++ +  K    SS+      KKR+YTQ+HL  GQSDFLL  C+ CG KYA 
Sbjct: 61  --SEVLKGCIEKTLKK---GSSSVPKNHKKKRNYTQFHLELGQSDFLLRHCAECGAKYAP 120

Query: 138 GDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILLVLDSDPSAHKNK 193
           GD  DE++H++FHK Y  G+ FKGW +E+    P     RI++V ++D  AH+NK
Sbjct: 121 GDELDEKNHQSFHKDYMYGLPFKGWQNEKAFTSPLFIKNRIVMVSENDSPAHRNK 162

[Close]

BLAST of Lsi05G006970 vs. ExPASy Swiss-Prot
Match: Q8CIB9 (N-acetyltransferase ESCO2 OS=Mus musculus OX=10090 GN=Esco2 PE=1 SV=3)

HSP 1 Score: 57.0 bits (136), Expect = 3.2e-07
Identity = 27/69 (39.13%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 119 GQSDFLLHFCSTCGIKYARGDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRI 178
           GQ  F    C +CG+ Y   + +DE  H   H ++  GI+F GW  ERV  +     G+I
Sbjct: 377 GQKHFGTTVCKSCGMIYTASNPEDEIQHLQHHHRFLEGIKFVGWKRERV--VAEFWDGKI 436

Query: 179 LLVLDSDPS 188
           +LVL  DPS
Sbjct: 437 VLVLPRDPS 443

[Close]

BLAST of Lsi05G006970 vs. ExPASy Swiss-Prot
Match: Q56NI9 (N-acetyltransferase ESCO2 OS=Homo sapiens OX=9606 GN=ESCO2 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.2e-07
Identity = 28/80 (35.00%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 108 KRSYTQYHLLFGQSDFLLHFCSTCGIKYARGDIDDEQSHKAFHKKYTCGIQFKGWTHERV 167
           K++  Q  +  GQ  F    C +CG+ Y   + +DE  H   H ++  GI++ GW  ERV
Sbjct: 369 KKTKDQLIIDAGQKHFGATVCKSCGMIYTASNPEDEMQHVQHHHRFLEGIKYVGWKKERV 428

Query: 168 IDIPSVEGGRILLVLDSDPS 188
             +     G+I+LVL  DPS
Sbjct: 429 --VAEFWDGKIVLVLPHDPS 446

[Close]

BLAST of Lsi05G006970 vs. ExPASy TrEMBL
Match: A0A5D3DNU9 (Protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004540 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 6.4e-91
Identity = 168/190 (88.42%), Postives = 175/190 (92.11%), Query Frame = 0


Query: 3   NESSSPELGIEVFPIMQSKISAFFKPSSSISSHRSSEPLNSNADDNDYGALKIWEKAEHQ 62
           + SSSPELGIEVFPIMQSKI  FFKP+SSISS+RS EPLNSNADD+DYG LKIWEKAEHQ
Sbjct: 6   SSSSSPELGIEVFPIMQSKIGTFFKPTSSISSYRSPEPLNSNADDSDYGTLKIWEKAEHQ 65

Query: 63  FINTYKRRNVKSPQRVDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQSD 122
           +INTYKRRNVKSPQ VDSETK  + DDSS K+ELA STKIVVKNKKRSY QYHLLFGQSD
Sbjct: 66  YINTYKRRNVKSPQCVDSETKTSVPDDSSGKSELALSTKIVVKNKKRSYAQYHLLFGQSD 125

Query: 123 FLLHFCSTCGIKYARGDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILLVL 182
           FLLHFCSTCGIKYARGD DDEQSHKAFHKKYTCGIQFKGWT ERVID PSVEGGRILLVL
Sbjct: 126 FLLHFCSTCGIKYARGDQDDEQSHKAFHKKYTCGIQFKGWTRERVIDTPSVEGGRILLVL 185

Query: 183 DSDPSAHKNK 193
           DSDPSAHKNK
Sbjct: 186 DSDPSAHKNK 195

[Close]

BLAST of Lsi05G006970 vs. ExPASy TrEMBL
Match: A0A5A7TP09 (Protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001490 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.7e-83
Identity = 155/175 (88.57%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 18  MQSKISAFFKPSSSISSHRSSEPLNSNADDNDYGALKIWEKAEHQFINTYKRRNVKSPQR 77
           MQSKI  FFKP+SSISS+RS EPLNSNADD+DYG LKIWEKAEHQ+INTYKRRNVKSPQ 
Sbjct: 1   MQSKIGTFFKPTSSISSYRSPEPLNSNADDSDYGTLKIWEKAEHQYINTYKRRNVKSPQC 60

Query: 78  VDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQSDFLLHFCSTCGIKYAR 137
           VDSETK  + DDSS K+ELA STKIVVKNKKRSY QYHLLFGQSDFLLHFCSTCGIKYAR
Sbjct: 61  VDSETKTSVPDDSSGKSELALSTKIVVKNKKRSYAQYHLLFGQSDFLLHFCSTCGIKYAR 120

Query: 138 GDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILLVLDSDPSAHKNK 193
           GD DDEQSHKAFHKKYTCGIQFKGWT ERVID PSVEGGRILLVLDSDPSAHKNK
Sbjct: 121 GDQDDEQSHKAFHKKYTCGIQFKGWTRERVIDTPSVEGGRILLVLDSDPSAHKNK 175

[Close]

BLAST of Lsi05G006970 vs. ExPASy TrEMBL
Match: A0A1S3B7K2 (protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Cucumis melo OX=3656 GN=LOC103486675 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.7e-83
Identity = 155/175 (88.57%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 18  MQSKISAFFKPSSSISSHRSSEPLNSNADDNDYGALKIWEKAEHQFINTYKRRNVKSPQR 77
           MQSKI  FFKP+SSISS+RS EPLNSNADD+DYG LKIWEKAEHQ+INTYKRRNVKSPQ 
Sbjct: 1   MQSKIGTFFKPTSSISSYRSPEPLNSNADDSDYGTLKIWEKAEHQYINTYKRRNVKSPQC 60

Query: 78  VDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQSDFLLHFCSTCGIKYAR 137
           VDSETK  + DDSS K+ELA STKIVVKNKKRSY QYHLLFGQSDFLLHFCSTCGIKYAR
Sbjct: 61  VDSETKTSVPDDSSGKSELALSTKIVVKNKKRSYAQYHLLFGQSDFLLHFCSTCGIKYAR 120

Query: 138 GDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILLVLDSDPSAHKNK 193
           GD DDEQSHKAFHKKYTCGIQFKGWT ERVID PSVEGGRILLVLDSDPSAHKNK
Sbjct: 121 GDQDDEQSHKAFHKKYTCGIQFKGWTRERVIDTPSVEGGRILLVLDSDPSAHKNK 175

[Close]

BLAST of Lsi05G006970 vs. ExPASy TrEMBL
Match: A0A0A0LB24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G781550 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 8.3e-83
Identity = 157/179 (87.71%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 18  MQSKISAFFKPSSSISSH--RSSEPLNSNADDNDYGALKIWEKAEHQFINTYKRRNVKSP 77
           MQS+IS FFKPSSSISSH  RS EPLNSNADD+DYG LKIWEKAEHQ+INTYKRR+VKSP
Sbjct: 1   MQSRISTFFKPSSSISSHRSRSPEPLNSNADDSDYGTLKIWEKAEHQYINTYKRRHVKSP 60

Query: 78  QRVDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQSDFLLHFCSTCGIKY 137
           Q VDSETK    DDSS K+ELAS TKIVVKNKKRSY QYHLLFGQSDFLLHFCSTCGIKY
Sbjct: 61  QCVDSETKTLFPDDSSGKSELASLTKIVVKNKKRSYAQYHLLFGQSDFLLHFCSTCGIKY 120

Query: 138 ARGDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILLVLDSDPSAHKNKCH 195
           ARGD DDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVE GRILLVLDSDPSAHKNK +
Sbjct: 121 ARGDQDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEDGRILLVLDSDPSAHKNKAY 179

[Close]

BLAST of Lsi05G006970 vs. ExPASy TrEMBL
Match: A0A6J1J4G6 (protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Cucurbita maxima OX=3661 GN=LOC111481677 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 9.6e-71
Identity = 138/181 (76.24%), Postives = 153/181 (84.53%), Query Frame = 0


Query: 18  MQSKISAFFKPSSSISSHRSSEPLNSNADDNDYGALKIWEKAEHQFINTYKRRN------ 77
           MQSKISAFFKP  SIS+H+S EPLN++ADD+D GALKIWEKAEHQ++NTYKRR       
Sbjct: 1   MQSKISAFFKPCPSISAHKSPEPLNTDADDSDDGALKIWEKAEHQYVNTYKRRAPSSDRI 60

Query: 78  VKSPQRVDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQSDFLLHFCSTC 137
           V+SPQ VDSE  IPI  DS AK EL S TK VVKNKKRSY QYHLLFGQSDFLLHFCSTC
Sbjct: 61  VRSPQCVDSEINIPIPGDSPAKEELVSLTKPVVKNKKRSYAQYHLLFGQSDFLLHFCSTC 120

Query: 138 GIKYARGDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILLVLDSDPSAHKN 193
           GIKYARGD  DE+ HK+FHKKYTCGIQFKGW+HER+I+I +VE GRILLVL+SDPSAH N
Sbjct: 121 GIKYARGDEGDEKYHKSFHKKYTCGIQFKGWSHERLINISTVEDGRILLVLNSDPSAHWN 180

[Close]

BLAST of Lsi05G006970 vs. NCBI nr
Match: XP_038904840.1 (protein CHROMOSOME TRANSMISSION FIDELITY 7 isoform X2 [Benincasa hispida])

HSP 1 Score: 350.9 bits (899), Expect = 8.2e-93
Identity = 172/192 (89.58%), Postives = 178/192 (92.71%), Query Frame = 0


Query: 1   MQNESSSPELGIEVFPIMQSKISAFFKPSSSISSHRSSEPLNSNADDNDYGALKIWEKAE 60
           MQNE S PEL IE+FPIMQSKIS FFK  SSISSHRS EPLNSNADD+DYG LKIWEKAE
Sbjct: 1   MQNEPSCPELAIEIFPIMQSKISTFFKRPSSISSHRSPEPLNSNADDSDYGTLKIWEKAE 60

Query: 61  HQFINTYKRRNVKSPQRVDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQ 120
           HQ+INTYKRRNV SPQ VD ETKIPI DDSSAK+ELASSTKI+VKNKKRSY QYHLLFGQ
Sbjct: 61  HQYINTYKRRNVTSPQCVDLETKIPIPDDSSAKSELASSTKILVKNKKRSYAQYHLLFGQ 120

Query: 121 SDFLLHFCSTCGIKYARGDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILL 180
           SDFLLHFCSTCGIKYARGD DDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILL
Sbjct: 121 SDFLLHFCSTCGIKYARGDEDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILL 180

Query: 181 VLDSDPSAHKNK 193
           VLDSDPSAHK+K
Sbjct: 181 VLDSDPSAHKHK 192

[Close]

BLAST of Lsi05G006970 vs. NCBI nr
Match: XP_038904837.1 (protein CHROMOSOME TRANSMISSION FIDELITY 7 isoform X1 [Benincasa hispida] >XP_038904838.1 protein CHROMOSOME TRANSMISSION FIDELITY 7 isoform X1 [Benincasa hispida] >XP_038904839.1 protein CHROMOSOME TRANSMISSION FIDELITY 7 isoform X1 [Benincasa hispida])

HSP 1 Score: 350.9 bits (899), Expect = 8.2e-93
Identity = 172/192 (89.58%), Postives = 178/192 (92.71%), Query Frame = 0


Query: 1   MQNESSSPELGIEVFPIMQSKISAFFKPSSSISSHRSSEPLNSNADDNDYGALKIWEKAE 60
           MQNE S PEL IE+FPIMQSKIS FFK  SSISSHRS EPLNSNADD+DYG LKIWEKAE
Sbjct: 1   MQNEPSCPELAIEIFPIMQSKISTFFKRPSSISSHRSPEPLNSNADDSDYGTLKIWEKAE 60

Query: 61  HQFINTYKRRNVKSPQRVDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQ 120
           HQ+INTYKRRNV SPQ VD ETKIPI DDSSAK+ELASSTKI+VKNKKRSY QYHLLFGQ
Sbjct: 61  HQYINTYKRRNVTSPQCVDLETKIPIPDDSSAKSELASSTKILVKNKKRSYAQYHLLFGQ 120

Query: 121 SDFLLHFCSTCGIKYARGDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILL 180
           SDFLLHFCSTCGIKYARGD DDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILL
Sbjct: 121 SDFLLHFCSTCGIKYARGDEDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILL 180

Query: 181 VLDSDPSAHKNK 193
           VLDSDPSAHK+K
Sbjct: 181 VLDSDPSAHKHK 192

[Close]

BLAST of Lsi05G006970 vs. NCBI nr
Match: TYK25316.1 (protein CHROMOSOME TRANSMISSION FIDELITY 7 [Cucumis melo var. makuwa])

HSP 1 Score: 343.6 bits (880), Expect = 1.3e-90
Identity = 168/190 (88.42%), Postives = 175/190 (92.11%), Query Frame = 0


Query: 3   NESSSPELGIEVFPIMQSKISAFFKPSSSISSHRSSEPLNSNADDNDYGALKIWEKAEHQ 62
           + SSSPELGIEVFPIMQSKI  FFKP+SSISS+RS EPLNSNADD+DYG LKIWEKAEHQ
Sbjct: 6   SSSSSPELGIEVFPIMQSKIGTFFKPTSSISSYRSPEPLNSNADDSDYGTLKIWEKAEHQ 65

Query: 63  FINTYKRRNVKSPQRVDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQSD 122
           +INTYKRRNVKSPQ VDSETK  + DDSS K+ELA STKIVVKNKKRSY QYHLLFGQSD
Sbjct: 66  YINTYKRRNVKSPQCVDSETKTSVPDDSSGKSELALSTKIVVKNKKRSYAQYHLLFGQSD 125

Query: 123 FLLHFCSTCGIKYARGDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILLVL 182
           FLLHFCSTCGIKYARGD DDEQSHKAFHKKYTCGIQFKGWT ERVID PSVEGGRILLVL
Sbjct: 126 FLLHFCSTCGIKYARGDQDDEQSHKAFHKKYTCGIQFKGWTRERVIDTPSVEGGRILLVL 185

Query: 183 DSDPSAHKNK 193
           DSDPSAHKNK
Sbjct: 186 DSDPSAHKNK 195

[Close]

BLAST of Lsi05G006970 vs. NCBI nr
Match: XP_008442913.2 (PREDICTED: protein CHROMOSOME TRANSMISSION FIDELITY 7 [Cucumis melo] >KAA0043816.1 protein CHROMOSOME TRANSMISSION FIDELITY 7 [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 3.5e-83
Identity = 155/175 (88.57%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 18  MQSKISAFFKPSSSISSHRSSEPLNSNADDNDYGALKIWEKAEHQFINTYKRRNVKSPQR 77
           MQSKI  FFKP+SSISS+RS EPLNSNADD+DYG LKIWEKAEHQ+INTYKRRNVKSPQ 
Sbjct: 1   MQSKIGTFFKPTSSISSYRSPEPLNSNADDSDYGTLKIWEKAEHQYINTYKRRNVKSPQC 60

Query: 78  VDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQSDFLLHFCSTCGIKYAR 137
           VDSETK  + DDSS K+ELA STKIVVKNKKRSY QYHLLFGQSDFLLHFCSTCGIKYAR
Sbjct: 61  VDSETKTSVPDDSSGKSELALSTKIVVKNKKRSYAQYHLLFGQSDFLLHFCSTCGIKYAR 120

Query: 138 GDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILLVLDSDPSAHKNK 193
           GD DDEQSHKAFHKKYTCGIQFKGWT ERVID PSVEGGRILLVLDSDPSAHKNK
Sbjct: 121 GDQDDEQSHKAFHKKYTCGIQFKGWTRERVIDTPSVEGGRILLVLDSDPSAHKNK 175

[Close]

BLAST of Lsi05G006970 vs. NCBI nr
Match: XP_004136509.2 (protein CHROMOSOME TRANSMISSION FIDELITY 7 [Cucumis sativus] >KAE8651113.1 hypothetical protein Csa_002602 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 8.5e-82
Identity = 156/177 (88.14%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 18  MQSKISAFFKPSSSISSHRSSEP--LNSNADDNDYGALKIWEKAEHQFINTYKRRNVKSP 77
           MQS+IS FFKPSSSISSHRS  P  LNSNADD+DYG LKIWEKAEHQ+INTYKRR+VKSP
Sbjct: 1   MQSRISTFFKPSSSISSHRSRSPESLNSNADDSDYGTLKIWEKAEHQYINTYKRRHVKSP 60

Query: 78  QRVDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQSDFLLHFCSTCGIKY 137
           Q VDSETK    DDSS K+ELAS TKIVVKNKKRSY QYHLLFGQSDFLLHFCSTCGIKY
Sbjct: 61  QCVDSETKTLFPDDSSGKSELASLTKIVVKNKKRSYAQYHLLFGQSDFLLHFCSTCGIKY 120

Query: 138 ARGDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILLVLDSDPSAHKNK 193
           ARGD DDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVE GRILLVLDSDPSAHKNK
Sbjct: 121 ARGDQDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEDGRILLVLDSDPSAHKNK 177

[Close]

BLAST of Lsi05G006970 vs. TAIR 10
Match: AT4G31400.1 (damaged DNA binding;DNA-directed DNA polymerases )

HSP 1 Score: 129.0 bits (323), Expect = 4.7e-30
Identity = 73/175 (41.71%), Postives = 105/175 (60.00%), Query Frame = 0


Query: 18  MQSKISAFFKPSSSISSHRSSEPLNSNADDNDYGALKIWEKAEHQFINTYKRRNVKSPQR 77
           MQ+KI++FFKPSSS S   S   + ++ DD     L +WE   +  +NTY+RR+  + + 
Sbjct: 1   MQAKINSFFKPSSSSSIAAS---VTTDTDD----GLAVWENNRNAIVNTYQRRSAITER- 60

Query: 78  VDSETKIPILDDSSAKAELASSTKIVVKNKKRSYTQYHLLFGQSDFLLHFCSTCGIKYAR 137
             SE     ++ +  K    SS+      KKR+YTQ+HL  GQSDFLL  C+ CG KYA 
Sbjct: 61  --SEVLKGCIEKTLKK---GSSSVPKNHKKKRNYTQFHLELGQSDFLLRHCAECGAKYAP 120

Query: 138 GDIDDEQSHKAFHKKYTCGIQFKGWTHERVIDIPSVEGGRILLVLDSDPSAHKNK 193
           GD  DE++H++FHK Y  G+ FKGW +E+    P     RI++V ++D  AH+NK
Sbjct: 121 GDELDEKNHQSFHKDYMYGLPFKGWQNEKAFTSPLFIKNRIVMVSENDSPAHRNK 162

The following BLAST results are available for this feature:

BLAST of Lsi05G006970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7UL74	6.7e-29	41.71	Protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Arabidopsis thaliana OX=3702 GN=CT...	[more]
Q8CIB9	3.2e-07	39.13	N-acetyltransferase ESCO2 OS=Mus musculus OX=10090 GN=Esco2 PE=1 SV=3	[more]
Q56NI9	4.2e-07	35.00	N-acetyltransferase ESCO2 OS=Homo sapiens OX=9606 GN=ESCO2 PE=1 SV=1	[more]

BLAST of Lsi05G006970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNU9	6.4e-91	88.42	Protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7TP09	1.7e-83	88.57	Protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B7K2	1.7e-83	88.57	protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Cucumis melo OX=3656 GN=LOC1034866...	[more]
A0A0A0LB24	8.3e-83	87.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G781550 PE=3 SV=1	[more]
A0A6J1J4G6	9.6e-71	76.24	protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Lsi05G006970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904840.1	8.2e-93	89.58	protein CHROMOSOME TRANSMISSION FIDELITY 7 isoform X2 [Benincasa hispida]	[more]
XP_038904837.1	8.2e-93	89.58	protein CHROMOSOME TRANSMISSION FIDELITY 7 isoform X1 [Benincasa hispida] >XP_03...	[more]
TYK25316.1	1.3e-90	88.42	protein CHROMOSOME TRANSMISSION FIDELITY 7 [Cucumis melo var. makuwa]	[more]
XP_008442913.2	3.5e-83	88.57	PREDICTED: protein CHROMOSOME TRANSMISSION FIDELITY 7 [Cucumis melo] >KAA0043816...	[more]
XP_004136509.2	8.5e-82	88.14	protein CHROMOSOME TRANSMISSION FIDELITY 7 [Cucumis sativus] >KAE8651113.1 hypot...	[more]

BLAST of Lsi05G006970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31400.1	4.7e-30	41.71	damaged DNA binding;DNA-directed DNA polymerases	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028005	N-acetyltransferase ESCO, zinc-finger	PFAM	PF13878	zf-C2H2_3	coord: 113..151 e-value: 2.8E-12 score: 46.3
IPR033257	N-acetyltransferase Eco1/Protein CHROMOSOME TRANSMISSION FIDELITY 7	PANTHER	PTHR45884:SF2	N-ACETYLTRANSFERASE ECO	coord: 18..193
None	No IPR available	PANTHER	PTHR45884	N-ACETYLTRANSFERASE ECO	coord: 18..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G006970.1	Lsi05G006970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045132	meiotic chromosome segregation
biological_process	GO:0000070	mitotic sister chromatid segregation
biological_process	GO:0034421	post-translational protein acetylation
biological_process	GO:0006275	regulation of DNA replication
biological_process	GO:0007062	sister chromatid cohesion
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016407	acetyltransferase activity
molecular_function	GO:0046872	metal ion binding