Lsi05G006930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G006930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr05: 9191341 .. 9194389 (-)
RNA-Seq Expression	Lsi05G006930
Synteny	Lsi05G006930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGAGTTGAGTGAAGGCATTAACTCTGAATTCCAACCTCATTTTGTTTCTGTAAAGGGACCAGCAGAAGCCACTAGATAACGAGGCAGCCGTATACGGAACATCAATGAGATACACCCATCTCATTCTCACTCACACCAGATAATCAATCCATCATGAATTTCTTCACCACTGAGATTTCAAATCCTGCTTCCTAATACTTGCTTCATTCCCAAATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACGACAATTTCTGCAAGAAACCCACCAAATTTAATCCTCTTCCGCCTCCGAAGGTTGCCTCCTGCGATCGAAATGGGTTCCGTTTGAGGGTTTATGGAGGGAGATTGTTGTTTCTGGGTGGGGGTTGGGTTAACGAACGGGTTTTTGGAAAAGATGGAGGGTTTAAGGGAAAGAGAGGGCTAGTTGTAGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGCGGCGGCGGCGGAGACGATGGGGCAACTGCGAGGCTTCTGGGTAATATTGCTTTGGCTGTTGGGTTAACTTATCTTTCGGTAACAGGGCAGCTTGGCTGGGTTTTGGATGCGATTGTTTCCATTTGGGTCTGTATTCCTCTCTCTATCTGCTTTTGATTCTCAATTTTAAGATCTGTTTTTTCTCTTCGGAAATTTGGGTGGAATAGTTCTACTGATTATTGAGACTTTCCTGTGGACATTTCAATGGCACTGTACTTTTACTTCCAATGTGCTTTGTTGTTCTAATTTAGCTGGTAATATCATTCCTGGGTTCAAAGTTCATGAGGCCATTACTCTCAACAACAACCCTCTTACCAATGCTTGGAACTTCTTATTAGATAACACAGTGTTCCATCTCAAAACTCTCATCTATTTTATTCAGATTGTGAAGCCTCTTGATTTTACTAAAGTGAAATCCTCAACATGCCCACCAAGATGGTGCCTCTTTGATTCACCATTCTTGGATCGAAAATTCAAGTTTGGACTTTATAGCTTTTGATACCATGTTAAATCTCCAATTAACTCAAGTTTAAACTAATGGATTATAGTAAATTTAATTATATCAACACTTTAACAATTCTATAGTTCATTTTGACTGTGGAACATCAGATTTTTCCTTCTAGGCGTTACGGAAATGGAAGGGCAGCTTTTCCACCTTATATTAGACGCCATTTTCTTTGCTAGTTGTGAAGAGTAATAGGATAACTCTTAAAAGGGCATATAGCATTCTTTCAGAGAGGTTGATTGAGAGTGTGGTTCACTTCAATCCCTTCCTTTAGGTATATACTATAACGTTATTTTTTCTAATTGTAATTATATGTTTCCTTTGATCATTAACAATGGAGATCCTTTCTGTAGTTAAGTTTTGTTTTTTGATGGATCTGTCATCTTTGATCTGCTTCTGCTGCCTCAGGCTTTAAAAACTGGTTTCTAATGGGGAAAAAAGCAGTGTGTATGTAGCTATATCTTGTTTGCATTCCAGAATTGATTGAAGATGAATTCTTTTTTCTTTAACCTCTTTGATGTTTGGTTTGATCTGTTGACATATATGCCTATTCAGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCTGCTTTTATATGGTGGGCAGGACGAGATATAGTTCAAAGCACTGTAAGTCTTTATTATATCTTTTGCATTTTCCATCTCAAATCTTGAGTTTATGTAACTTTTAATTAGCATATTCTCACTTCTTGTCTTGCATTTGCAGTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAGTAAGTGATCTTGAAAGAACTTGTTTAAGGAGATTCCTCGATTCATTTAATACGAGTTACAAATATTAACACACTTCATTTACTTCCATATGGCAGATCAACACTGAATGAAGAGCTGCAACTATGCCCTTTTTGTAGCCAACCTTTCTCTGGTAAACCCCCAAGTTTTTTCAGATCCTTAAAGTTCCTGAGTTCAAAACACTGTTAGTTTTTTCTTTTCAAGGACAGAGTAAACGTCTTATTCATTTGTATGTATTGACTCTTCCTTTACAAATTCAGTGGTGGATGACAAGTTTGTGAGGGATTCAGTGAAGTTCTCCAACAAAACTGCTCCTACCTTTGGACAGGCATTCAGTGACTTTACTTCTCCCCAAAAAGGTAAAATTCTTGTTGGACTATATCCCGCTCGACATGAAATATTTAACGTACTCAAAACCGAACCACCTCGTGGCTCTTGTTATTGATTGTAGGGAAGGAAACTTCTGGTGCAGTGGTTGACATAGAAGCAGAAGTAAAAGATGTGGACTGAAGTCGCGTTTGAATAGCATGGTTTGTCTAAAGCACTGCGTATGAACCATGGATTACAGTAAGCATTCTTCACACATTTAGGGAAAAAAGTCAGGTTCAATTGGGTTTTGCCAGATTGAATTAAGTTTTGACTCTGGAAATCTTTGTATATTTGTTGTGTATGTTCTTCATGGCCAGAAATTTCCAATTCTGAAACAACTGTAGGAATTTGTGAAATGAAATGCCTTCACTTTGTATATGGATTTTGATACAATAAGTCTAAAGTACAATAATCTTTACTCTGTAACTAATAAAAGACTGATGGACTATAACATAGAACTCTTAGCTTGTTTGCTTCACATATTGGAAAAGGAACATTTCTGGATCATTTTATTTTTATATACTTACAGATCCTATCTCGAAAACCCGAGACGCTAGTGTTTTCCATCTCCAACTTTCTGCAGGGGAGAACAGAGGCAAGTTAGAGCAACCATGCCTAAGCCATTCAGCAATAAAATGTAGAGAAAAAGAAAGGTCACTATTGATATTTTTTAACCCACATTTTCTGTACCGATAAATACGGACTAGCTCTTAAAGCTATTAATCGGATCCAGAATGTTGGATTTAACCCCTGAATTGTGGTTTATTAATAGATCTACTAGACAAAATTGAAAGTTTATGTTTAGACATAAAATTTAAATATCTCAAATTTGATAAGAATCTATAAATAAGAAATTGAAAGTTTAAGACC

mRNA sequence

TTAGAGTTGAGTGAAGGCATTAACTCTGAATTCCAACCTCATTTTGTTTCTGTAAAGGGACCAGCAGAAGCCACTAGATAACGAGGCAGCCGTATACGGAACATCAATGAGATACACCCATCTCATTCTCACTCACACCAGATAATCAATCCATCATGAATTTCTTCACCACTGAGATTTCAAATCCTGCTTCCTAATACTTGCTTCATTCCCAAATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACGACAATTTCTGCAAGAAACCCACCAAATTTAATCCTCTTCCGCCTCCGAAGGTTGCCTCCTGCGATCGAAATGGGTTCCGTTTGAGGGTTTATGGAGGGAGATTGTTGTTTCTGGGTGGGGGTTGGGTTAACGAACGGGTTTTTGGAAAAGATGGAGGGTTTAAGGGAAAGAGAGGGCTAGTTGTAGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGCGGCGGCGGCGGAGACGATGGGGCAACTGCGAGGCTTCTGGGTAATATTGCTTTGGCTGTTGGGTTAACTTATCTTTCGGTAACAGGGCAGCTTGGCTGGGTTTTGGATGCGATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCTGCTTTTATATGGTGGGCAGGACGAGATATAGTTCAAAGCACTTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAATCAACACTGAATGAAGAGCTGCAACTATGCCCTTTTTGTAGCCAACCTTTCTCTGTGGTGGATGACAAGTTTGTGAGGGATTCAGTGAAGTTCTCCAACAAAACTGCTCCTACCTTTGGACAGGCATTCAGTGACTTTACTTCTCCCCAAAAAGGGAAGGAAACTTCTGGTGCAGTGGTTGACATAGAAGCAGAAGTAAAAGATGTGGACTGAAGTCGCGTTTGAATAGCATGGTTTGTCTAAAGCACTGCGTATGAACCATGGATTACAATCCTATCTCGAAAACCCGAGACGCTAGTGTTTTCCATCTCCAACTTTCTGCAGGGGAGAACAGAGGCAAGTTAGAGCAACCATGCCTAAGCCATTCAGCAATAAAATGTAGAGAAAAAGAAAGGTCACTATTGATATTTTTTAACCCACATTTTCTGTACCGATAAATACGGACTAGCTCTTAAAGCTATTAATCGGATCCAGAATGTTGGATTTAACCCCTGAATTGTGGTTTATTAATAGATCTACTAGACAAAATTGAAAGTTTATGTTTAGACATAAAATTTAAATATCTCAAATTTGATAAGAATCTATAAATAAGAAATTGAAAGTTTAAGACC

Coding sequence (CDS)

ATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACGACAATTTCTGCAAGAAACCCACCAAATTTAATCCTCTTCCGCCTCCGAAGGTTGCCTCCTGCGATCGAAATGGGTTCCGTTTGAGGGTTTATGGAGGGAGATTGTTGTTTCTGGGTGGGGGTTGGGTTAACGAACGGGTTTTTGGAAAAGATGGAGGGTTTAAGGGAAAGAGAGGGCTAGTTGTAGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGCGGCGGCGGCGGAGACGATGGGGCAACTGCGAGGCTTCTGGGTAATATTGCTTTGGCTGTTGGGTTAACTTATCTTTCGGTAACAGGGCAGCTTGGCTGGGTTTTGGATGCGATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCTGCTTTTATATGGTGGGCAGGACGAGATATAGTTCAAAGCACTTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAATCAACACTGAATGAAGAGCTGCAACTATGCCCTTTTTGTAGCCAACCTTTCTCTGTGGTGGATGACAAGTTTGTGAGGGATTCAGTGAAGTTCTCCAACAAAACTGCTCCTACCTTTGGACAGGCATTCAGTGACTTTACTTCTCCCCAAAAAGGGAAGGAAACTTCTGGTGCAGTGGTTGACATAGAAGCAGAAGTAAAAGATGTGGACTGA

Protein sequence

MTSFIRFSTFNILHDNFCKKPTKFNPLPPPKVASCDRNGFRLRVYGGRLLFLGGGWVNERVFGKDGGFKGKRGLVVARFNQGFGFNGGGGGGGDDGATARLLGNIALAVGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQLCPFCSQPFSVVDDKFVRDSVKFSNKTAPTFGQAFSDFTSPQKGKETSGAVVDIEAEVKDVD

Homology

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BLAST of Lsi05G006930 vs. ExPASy TrEMBL
Match: A0A6J1JCT5 (uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.4e-117
Identity = 217/241 (90.04%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MTSFIRFSTFN-ILHDNFCKKPTKFNPLPPPKVASCDRNGFRLRVYGGRLLFLGGGWVNE 60
           MTSFIRFS+FN +LHDNF KKPT+FNPLPPPKVASCDRNGFRLR+ GG+L FL GGW N+
Sbjct: 1   MTSFIRFSSFNLLLHDNFYKKPTRFNPLPPPKVASCDRNGFRLRLCGGKLPFLSGGWSNK 60

Query: 61  RVFGKDGGFKGKRGLVVARFNQGFGFN-GGGGGGGDDGATARLLGNIALAVGLTYLSVTG 120
            V GK G FKGKRGL+VARFNQGFGFN GGGGGGGDDGATARLLGNIALA GLTYLSVTG
Sbjct: 61  GVLGKYGVFKGKRGLIVARFNQGFGFNGGGGGGGGDDGATARLLGNIALAAGLTYLSVTG 120

Query: 121 QLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180
           QLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL
Sbjct: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180

Query: 181 CPFCSQPFSVVDDKFVRDSVKFSNKTAPTFGQAFSDFTSPQKGKETSGAVVDIEAEVKDV 240
           CPFCSQPFSVVDDKFVRDSV FSNKT+ TFGQAFSDFTSP+KGKETSGAVVDIEAEVKDV
Sbjct: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240

[Close]

BLAST of Lsi05G006930 vs. ExPASy TrEMBL
Match: A0A0A0L5A4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116
Identity = 217/246 (88.21%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHDNFCKKPTKFNPLPPPKVASCDRNGFRLRVYGGRLLFLGGGWVNER 60
           MTSFIRFSTFNILH+NFC KPTKFNPLPPPKV  C  +G RLR YG RLLF GGGWV++R
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKDGGFKGKRG-LVVARFNQGFGFNGG------GGGGGDDGATARLLGNIALAVGLTY 120
           VFGK GGFKGKRG L+VARFNQGFGFNGG      GG GGDDGATARL+GNIALA GLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTAPTFGQAFSDFTSPQKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSVKFSNKT+ TFGQAFSDFTSP+KGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

[Close]

BLAST of Lsi05G006930 vs. ExPASy TrEMBL
Match: A0A5A7TVG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001050 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.5e-116
Identity = 214/240 (89.17%), Postives = 221/240 (92.08%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHDNFCKKPTKFNPLPPPKVASCDRNGFRLRVYGGRLLFLGGGWVNER 60
           MTSFIRFSTFNILH+NFC KPTKFNPLPPPKV  C+ +G RLR YG RL F GGGWV +R
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKDGGFKGKRG-LVVARFNQGFGFNGGGGGGGDDGATARLLGNIALAVGLTYLSVTGQ 120
           VFGK  GFKGKRG L+VARFNQGFGFNGGGG GGDDGATARLLGNIALA GLTYLSVTGQ
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120

Query: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQLC 180
           LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLNEELQLC
Sbjct: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC 180

Query: 181 PFCSQPFSVVDDKFVRDSVKFSNKTAPTFGQAFSDFTSPQKGKETSGAVVDIEAEVKDVD 240
           PFCSQPFSVVDDKFVRDSV FS KT+ TFGQAFSDFTSP+KGKETSGAVVDIEAEVKDVD
Sbjct: 181 PFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD 240

[Close]

BLAST of Lsi05G006930 vs. ExPASy TrEMBL
Match: A0A1S3BUA7 (uncharacterized protein LOC103493356 OS=Cucumis melo OX=3656 GN=LOC103493356 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.5e-116
Identity = 214/240 (89.17%), Postives = 221/240 (92.08%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHDNFCKKPTKFNPLPPPKVASCDRNGFRLRVYGGRLLFLGGGWVNER 60
           MTSFIRFSTFNILH+NFC KPTKFNPLPPPKV  C+ +G RLR YG RL F GGGWV +R
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKDGGFKGKRG-LVVARFNQGFGFNGGGGGGGDDGATARLLGNIALAVGLTYLSVTGQ 120
           VFGK  GFKGKRG L+VARFNQGFGFNGGGG GGDDGATARLLGNIALA GLTYLSVTGQ
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120

Query: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQLC 180
           LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLNEELQLC
Sbjct: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC 180

Query: 181 PFCSQPFSVVDDKFVRDSVKFSNKTAPTFGQAFSDFTSPQKGKETSGAVVDIEAEVKDVD 240
           PFCSQPFSVVDDKFVRDSV FS KT+ TFGQAFSDFTSP+KGKETSGAVVDIEAEVKDVD
Sbjct: 181 PFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD 240

[Close]

BLAST of Lsi05G006930 vs. ExPASy TrEMBL
Match: A0A6J1EMN9 (uncharacterized protein LOC111435981 OS=Cucurbita moschata OX=3662 GN=LOC111435981 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 5.1e-115
Identity = 214/241 (88.80%), Postives = 222/241 (92.12%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHDNFCKKPTKFNPLPPPKVASCDRNGFRLRVYGGRLLFLGGGWVNER 60
           MTSFIRFS+FN+LHDNF  KPT+FNPLPPPKVASC RNGFRLR   G+L FL GGW N  
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60

Query: 61  VFGKDGGFKGKRGLVVARFNQGFGFNGG--GGGGGDDGATARLLGNIALAVGLTYLSVTG 120
           V GK G FKGKRGL+VARFNQGFGFNGG  GGGGGDDGATARLLGNIALA GLTYLSVTG
Sbjct: 61  VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120

Query: 121 QLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180
           QLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL
Sbjct: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180

Query: 181 CPFCSQPFSVVDDKFVRDSVKFSNKTAPTFGQAFSDFTSPQKGKETSGAVVDIEAEVKDV 240
           CPFCSQPFSVVDDKFVRDSV FSNKT+ TFGQAFSDFTSP+KGKETSGAVVDIEAEVKDV
Sbjct: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240

[Close]

BLAST of Lsi05G006930 vs. NCBI nr
Match: XP_022985259.1 (uncharacterized protein LOC111483302 [Cucurbita maxima])

HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-116
Identity = 217/241 (90.04%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MTSFIRFSTFN-ILHDNFCKKPTKFNPLPPPKVASCDRNGFRLRVYGGRLLFLGGGWVNE 60
           MTSFIRFS+FN +LHDNF KKPT+FNPLPPPKVASCDRNGFRLR+ GG+L FL GGW N+
Sbjct: 1   MTSFIRFSSFNLLLHDNFYKKPTRFNPLPPPKVASCDRNGFRLRLCGGKLPFLSGGWSNK 60

Query: 61  RVFGKDGGFKGKRGLVVARFNQGFGFN-GGGGGGGDDGATARLLGNIALAVGLTYLSVTG 120
            V GK G FKGKRGL+VARFNQGFGFN GGGGGGGDDGATARLLGNIALA GLTYLSVTG
Sbjct: 61  GVLGKYGVFKGKRGLIVARFNQGFGFNGGGGGGGGDDGATARLLGNIALAAGLTYLSVTG 120

Query: 121 QLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180
           QLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL
Sbjct: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180

Query: 181 CPFCSQPFSVVDDKFVRDSVKFSNKTAPTFGQAFSDFTSPQKGKETSGAVVDIEAEVKDV 240
           CPFCSQPFSVVDDKFVRDSV FSNKT+ TFGQAFSDFTSP+KGKETSGAVVDIEAEVKDV
Sbjct: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240

[Close]

BLAST of Lsi05G006930 vs. NCBI nr
Match: XP_004149291.1 (uncharacterized protein LOC101205846 [Cucumis sativus] >KGN56214.1 hypothetical protein Csa_010420 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 3.3e-116
Identity = 217/246 (88.21%), Postives = 225/246 (91.46%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHDNFCKKPTKFNPLPPPKVASCDRNGFRLRVYGGRLLFLGGGWVNER 60
           MTSFIRFSTFNILH+NFC KPTKFNPLPPPKV  C  +G RLR YG RLLF GGGWV++R
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKDGGFKGKRG-LVVARFNQGFGFNGG------GGGGGDDGATARLLGNIALAVGLTY 120
           VFGK GGFKGKRG L+VARFNQGFGFNGG      GG GGDDGATARL+GNIALA GLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTAPTFGQAFSDFTSPQKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSVKFSNKT+ TFGQAFSDFTSP+KGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

[Close]

BLAST of Lsi05G006930 vs. NCBI nr
Match: XP_038905451.1 (uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida] >XP_038905452.1 uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida])

HSP 1 Score: 427.9 bits (1099), Expect = 5.6e-116
Identity = 220/241 (91.29%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHDNFCKKPTKFNPLPPPKVASCDRNGFRLRVYGGRLLFLGGGWVNER 60
           MTSFIRFST NILHD+FC KPTKFNPLP PKVAS DRNGFRLRVYG RL FL     N R
Sbjct: 1   MTSFIRFSTLNILHDSFCNKPTKFNPLPAPKVASWDRNGFRLRVYGRRLSFLDVCRGNVR 60

Query: 61  VFGKDGGFKGKRGLVVARFNQGFGFN--GGGGGGGDDGATARLLGNIALAVGLTYLSVTG 120
           VFGK GG KGKRGL+VARFNQGFGFN  GGGGGGGDDGATARLLGNIALAVGLTYLSVTG
Sbjct: 61  VFGKHGGSKGKRGLIVARFNQGFGFNGGGGGGGGGDDGATARLLGNIALAVGLTYLSVTG 120

Query: 121 QLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180
           QLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL
Sbjct: 121 QLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180

Query: 181 CPFCSQPFSVVDDKFVRDSVKFSNKTAPTFGQAFSDFTSPQKGKETSGAVVDIEAEVKDV 240
           CPFCSQPFSVVDDKFVRDSVKFSNKT+ TFGQAF DFTSPQKGKETSGAVVDIEAEVKDV
Sbjct: 181 CPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFGDFTSPQKGKETSGAVVDIEAEVKDV 240

[Close]

BLAST of Lsi05G006930 vs. NCBI nr
Match: XP_008452285.1 (PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo] >KAA0046868.1 uncharacterized protein E6C27_scaffold230G00230 [Cucumis melo var. makuwa] >TYK03278.1 uncharacterized protein E5676_scaffold298G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 427.6 bits (1098), Expect = 7.3e-116
Identity = 214/240 (89.17%), Postives = 221/240 (92.08%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHDNFCKKPTKFNPLPPPKVASCDRNGFRLRVYGGRLLFLGGGWVNER 60
           MTSFIRFSTFNILH+NFC KPTKFNPLPPPKV  C+ +G RLR YG RL F GGGWV +R
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKDGGFKGKRG-LVVARFNQGFGFNGGGGGGGDDGATARLLGNIALAVGLTYLSVTGQ 120
           VFGK  GFKGKRG L+VARFNQGFGFNGGGG GGDDGATARLLGNIALA GLTYLSVTGQ
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120

Query: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQLC 180
           LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLNEELQLC
Sbjct: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLC 180

Query: 181 PFCSQPFSVVDDKFVRDSVKFSNKTAPTFGQAFSDFTSPQKGKETSGAVVDIEAEVKDVD 240
           PFCSQPFSVVDDKFVRDSV FS KT+ TFGQAFSDFTSP+KGKETSGAVVDIEAEVKDVD
Sbjct: 181 PFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD 240

[Close]

BLAST of Lsi05G006930 vs. NCBI nr
Match: KAG7015466.1 (hypothetical protein SDJN02_23102 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424.9 bits (1091), Expect = 4.7e-115
Identity = 214/241 (88.80%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHDNFCKKPTKFNPLPPPKVASCDRNGFRLRVYGGRLLFLGGGWVNER 60
           MTSFIRFS+FN+LHDNF  KPT+FNPLPPPKVASC RNGFRLR+  G+L FL GGW N  
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRLCRGKLPFLSGGWGNNG 60

Query: 61  VFGKDGGFKGKRGLVVARFNQGFGFNGG--GGGGGDDGATARLLGNIALAVGLTYLSVTG 120
           V GK G FKGKRGL+VARFNQGFGFNGG  GGGGGDDGATARLLGNIALA GLTYLSVTG
Sbjct: 61  VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120

Query: 121 QLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180
           QLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL
Sbjct: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180

Query: 181 CPFCSQPFSVVDDKFVRDSVKFSNKTAPTFGQAFSDFTSPQKGKETSGAVVDIEAEVKDV 240
           CPFCSQPFSVVDDKFVRDSV FSNKT+ TFGQAFSDFTSP+KGKETSGAVVDIEAEVKDV
Sbjct: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240

[Close]

BLAST of Lsi05G006930 vs. TAIR 10
Match: AT4G27390.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 216.1 bits (549), Expect = 3.1e-56
Identity = 125/235 (53.19%), Postives = 160/235 (68.09%), Query Frame = 0


Query: 13  LHDNFCKKPT-----KFNPLPPPKVASCDRNGFR--LRVYGGRLLFLGGGWVNERVFGKD 72
           +HD F K+P+     K   L P  + +  + G R  L  +  R   +G G +   +   +
Sbjct: 14  IHDGFNKEPSNRLHAKRRSLAPSMLQT--KLGLRACLIEHRQRQRVMGLGDIG--MLASE 73

Query: 73  GGFKGKRGLVVARFNQGFGFNGGGGGGGDDGATARLLGNIALAVGLTYLSVTGQLGWVLD 132
                KR +V  R   G  FN     GGD+    R+LGN+ALA+GLTYLS+TGQLGW+LD
Sbjct: 74  KSLNRKRRVVRVR---GLKFN-----GGDNNGNGRILGNLALAIGLTYLSMTGQLGWILD 133

Query: 133 AIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQLCPFCSQP 192
           AIVS+WL+ V+VPI+G+ AF WWA RDIVQS CPNCGNEFQIFKS +++E+QLCPFC+QP
Sbjct: 134 AIVSVWLIVVIVPILGLGAFFWWAQRDIVQSNCPNCGNEFQIFKSAMDDEVQLCPFCTQP 193

Query: 193 FSVVDDKFVRDSVKFSNKTAPTFGQAFSDFTS-PQKGKETSGAVVDIEAEVKDVD 240
           FSVVDDKFV++ VKFSN+T   FGQ  + F+S P+KGK +S AVVDIEAEV D D
Sbjct: 194 FSVVDDKFVKEPVKFSNQTT-AFGQDLNGFSSKPKKGKGSSTAVVDIEAEVTDAD 235

The following BLAST results are available for this feature:

BLAST of Lsi05G006930 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi05G006930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JCT5	5.4e-117	90.04	uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302...	[more]
A0A0A0L5A4	1.6e-116	88.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1	[more]
A0A5A7TVG5	3.5e-116	89.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BUA7	3.5e-116	89.17	uncharacterized protein LOC103493356 OS=Cucumis melo OX=3656 GN=LOC103493356 PE=...	[more]
A0A6J1EMN9	5.1e-115	88.80	uncharacterized protein LOC111435981 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]

BLAST of Lsi05G006930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022985259.1	1.1e-116	90.04	uncharacterized protein LOC111483302 [Cucurbita maxima]	[more]
XP_004149291.1	3.3e-116	88.21	uncharacterized protein LOC101205846 [Cucumis sativus] >KGN56214.1 hypothetical ...	[more]
XP_038905451.1	5.6e-116	91.29	uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida] >XP_03890545...	[more]
XP_008452285.1	7.3e-116	89.17	PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo] >KAA0046868.1 unc...	[more]
KAG7015466.1	4.7e-115	88.80	hypothetical protein SDJN02_23102 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi05G006930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27390.1	3.1e-56	53.19	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36785	OS05G0502500 PROTEIN	coord: 9..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G006930.1	Lsi05G006930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane