Lsi05G006910 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGCTACATAATCGTACAACAGACCATCGTGAAGGGACAATTGGAGCCCAGATATTTTTGCTTCCACGTTGATTCATTTCGCCGCCGGCCCATTAAAATGAATGACGTCGTCGGAAACAACCGTATTCGTTATCTAAAAGACGGCTTTCACCACCGTGACCTGCGGACGAAGATCATCCAGTTTCTCACCGGTGTTGGCAAGTTCGCCGTGGACTCTACCATCTTCAGTTCTCTCAAGGCCGTCTCCGGTTCTCTTTCCACTCTCTTCCTCATAAATAGAATCCGTGGAGTATTTACGAAGTTTTTGTGCTTTCAATTTTTGATTTACATCGAAAACACTGCGAACCCTAATTCGTTCAGGTTAAGATCTAGTGTCGTCTTCCGTAGCTCTAATATTTTGTATGGATCTTCTTCTGCAGCGCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCCCCCCCCCCCCCCCAAAATATTCCTTTCGACTCATCTGCCTTTAATCTGAATAATTGGATCTTTTCCCTCCCCGCTGCCGCTAACGGATGGAAAATTTTTGTGAGAGTATTTCGTTTGTATTCGATTAGGAATATGCGTGGAAGAAAATTGAAGCTTGCATATTCCAATAGCATGTTTTGAGTATCATAGTTCTTTATGAAGTTCCAAGTAGTTGAATTTTGCTCGGCCTGAATTTTCAATTTTTCTTCCAGGAGCTCCAAAACAAGTACCAAAATTTGGGTTCCCCTTCATTTTGGTCCTCTTTTTCCTCGAGTGACTCTGGGTGAAAATTTCAAAGAAGGTGAAGCATTTTGTGTGACAAGTCTTCACCTTGGATCGAGTTTGAGGAAAATGACCCTGACTGGCCATTGTGTATTCTCTGTAGTGGGCGCATTGGGCGGCTAGTGAACTTGACCATATCTTCTAGAGTGTGATTTAGCCCGTGTTGTTCAGAGTCTTTTCTTTGAGGAGTTTGGTTTAAGTCCGGCTAGACATAGGTGTTGCAGATCAAGGAGTTCCTTCTTCATCTCCTTTTGAGAGAGGAAATGTTGTTGTGGTATGTTGGAATGTTTTCTGTTTTATAGGGCCTTTGGAGAGAGGAATAACAGGGTCTTTAAGGGCTTGAGAGGTTTTTTTAAGTGATGTTTGAGCCTGTCTTAGGTTGAAATCTTTTGGTAGGGTTCGACGGCGGCTAAGCTTTTTTTTATAATCTGTTAGGTCTTGTCTTACATGATTGGAGGCTTTCTTTAGTTTGCCTCCTTTTTTCTGAGTTCATTCTTCTATAATCTGTTAGGTCTTGTCTTACTCGATTGGAGGTTTTTCTTTAGTTTGCCTCCTTTGAGCTTATTTTTGTATACGCTTGTATTCTTTGATCTCTTCATTTCATTTCGGTTATTCATTAAAAATCTATTATAAAAGAAGGTTACGTTGGATTCTGATATACCACGAGAATGGAAAAGAGCATGTGATTGTTCCTTTATTGTGCCAGGCTGCCAGTTTTAGATTATGTTCTGGTTGGTTTAGTTTTAAAAATTTTTGGTTCTGGCTTCAGGCTTTTTTTTTCCCTTTTTTTTTTCCCCTTAAACTGACATGTTGGTATGATATTGCGTTCGGTAAAAGTCTGACCTGAATTGATCTAGTTACACCTTTACGGATAATTTGCTGACCTGAAATTACTCGATTCAAATGGAGAAAATGCATTGTTATGCTTACATATTTCTCTACGGCTTTTCTTTACATACCTTTCGTGGCTGAATTGATCAATCTCCTGGTTTTTTGTGGACGATCTTTAGAAGTCTTCAACTGATTTCTGCTAGTATTCAACTCTTCATTTTCTCATTTTTGGTTTCTTCTTGTGCTTGAGTGATGTAGGTAAGAATCAGGCACATAAGATTGGTGAGGGAGGATTAAAGGATACGTCCCATTCATCCTCTTTAAATGTAAAGAAACCGGAAGAGATTAAACTAGTGATGGATAAGATGCAGGCAGAGATGGAGGAAACAGAGGCACACAAGAATAAAATGAAGCAACACCATTGTACATCTGCAGAGATTGTTGATGATTCTGAACCACTGAAGAAGTTGCCAGGGGAAGGTGCCAAAGGATCAGCCAACGCAATTCAAAACAAGAAAAGGATCTTCATCCGTTCCCGACTGTAGACAATCTAGTTCATTATTGTACTAGAACAACAAGAATAATGGTTTCCTTTCTAGACAAGGTATGTAAGTTGTAGATAGAGAAATATTAGTTTATTACTTTATCATCATGTCTGAAGCTATGCATCCAATATTTTATTTTCATGGATGGAATTCTTAGCAAGTTGTATACAAATCTCTCTCTTGTTCCTTCGTATGTATGTTTCTTTTTCTTAGATAAGAAACAATTTGATTGATAGTATGAAATTACAAAAAAGGGAATCTTAGAGGGTAGTATAACTATAGATATGGAACAAGGGAGAGCATTTACACTAAGTTTGTGTTTCAATTGATCATTTGGCATTAATAGTGTAAAATGAGACTAATATG CCGCTACATAATCGTACAACAGACCATCGTGAAGGGACAATTGGAGCCCAGATATTTTTGCTTCCACGTTGATTCATTTCGCCGCCGGCCCATTAAAATGAATGACGTCGTCGGAAACAACCGTATTCGTTATCTAAAAGACGGCTTTCACCACCGTGACCTGCGGACGAAGATCATCCAGTTTCTCACCGGTGTTGGCAAGTTCGCCGTGGACTCTACCATCTTCAGTTCTCTCAAGGCCGTCTCCGGTAAGAATCAGGCACATAAGATTGGTGAGGGAGGATTAAAGGATACGTCCCATTCATCCTCTTTAAATGTAAAGAAACCGGAAGAGATTAAACTAGTGATGGATAAGATGCAGGCAGAGATGGAGGAAACAGAGGCACACAAGAATAAAATGAAGCAACACCATTGTACATCTGCAGAGATTGTTGATGATTCTGAACCACTGAAGAAGTTGCCAGGGGAAGGTGCCAAAGGATCAGCCAACGCAATTCAAAACAAGAAAAGGATCTTCATCCGTTCCCGACTGTAGACAATCTAGTTCATTATTGTACTAGAACAACAAGAATAATGGTTTCCTTTCTAGACAAGGTATGTAAGTTGTAGATAGAGAAATATTAGTTTATTACTTTATCATCATGTCTGAAGCTATGCATCCAATATTTTATTTTCATGGATGGAATTCTTAGCAAGTTGTATACAAATCTCTCTCTTGTTCCTTCGTATGTATGTTTCTTTTTCTTAGATAAGAAACAATTTGATTGATAGTATGAAATTACAAAAAAGGGAATCTTAGAGGGTAGTATAACTATAGATATGGAACAAGGGAGAGCATTTACACTAAGTTTGTGTTTCAATTGATCATTTGGCATTAATAGTGTAAAATGAGACTAATATG ATGAATGACGTCGTCGGAAACAACCGTATTCGTTATCTAAAAGACGGCTTTCACCACCGTGACCTGCGGACGAAGATCATCCAGTTTCTCACCGGTGTTGGCAAGTTCGCCGTGGACTCTACCATCTTCAGTTCTCTCAAGGCCGTCTCCGGTAAGAATCAGGCACATAAGATTGGTGAGGGAGGATTAAAGGATACGTCCCATTCATCCTCTTTAAATGTAAAGAAACCGGAAGAGATTAAACTAGTGATGGATAAGATGCAGGCAGAGATGGAGGAAACAGAGGCACACAAGAATAAAATGAAGCAACACCATTGTACATCTGCAGAGATTGTTGATGATTCTGAACCACTGAAGAAGTTGCCAGGGGAAGGTGCCAAAGGATCAGCCAACGCAATTCAAAACAAGAAAAGGATCTTCATCCGTTCCCGACTGTAG MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNKMKQHHCTSAEIVDDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL Homology
BLAST of Lsi05G006910 vs. ExPASy TrEMBL
Match: A0A1S3BUM3 (uncharacterized protein LOC103493357 OS=Cucumis melo OX=3656 GN=LOC103493357 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 1.2e-55 Identity = 122/148 (82.43%), Postives = 129/148 (87.16%), Query Frame = 0
BLAST of Lsi05G006910 vs. ExPASy TrEMBL
Match: A0A5D3BVT6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001010 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 3.6e-55 Identity = 121/148 (81.76%), Postives = 129/148 (87.16%), Query Frame = 0
BLAST of Lsi05G006910 vs. ExPASy TrEMBL
Match: A0A0A0L6J4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099730 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.6e-53 Identity = 121/157 (77.07%), Postives = 130/157 (82.80%), Query Frame = 0
BLAST of Lsi05G006910 vs. ExPASy TrEMBL
Match: A0A6J1CP03 (uncharacterized protein LOC111012775 OS=Momordica charantia OX=3673 GN=LOC111012775 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.1e-51 Identity = 116/148 (78.38%), Postives = 123/148 (83.11%), Query Frame = 0
BLAST of Lsi05G006910 vs. ExPASy TrEMBL
Match: A0A7N2M8R1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20 Identity = 73/149 (48.99%), Postives = 93/149 (62.42%), Query Frame = 0
BLAST of Lsi05G006910 vs. NCBI nr
Match: XP_038905013.1 (uncharacterized protein LOC120091185 [Benincasa hispida]) HSP 1 Score: 258.1 bits (658), Expect = 4.6e-65 Identity = 131/145 (90.34%), Postives = 137/145 (94.48%), Query Frame = 0
BLAST of Lsi05G006910 vs. NCBI nr
Match: KAG6577390.1 (hypothetical protein SDJN03_24964, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015467.1 hypothetical protein SDJN02_23103, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 229.6 bits (584), Expect = 1.8e-56 Identity = 118/145 (81.38%), Postives = 126/145 (86.90%), Query Frame = 0
BLAST of Lsi05G006910 vs. NCBI nr
Match: XP_023552444.1 (uncharacterized protein LOC111810104 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 227.6 bits (579), Expect = 6.7e-56 Identity = 118/145 (81.38%), Postives = 126/145 (86.90%), Query Frame = 0
BLAST of Lsi05G006910 vs. NCBI nr
Match: XP_008452286.1 (PREDICTED: uncharacterized protein LOC103493357 [Cucumis melo]) HSP 1 Score: 225.7 bits (574), Expect = 2.6e-55 Identity = 122/148 (82.43%), Postives = 129/148 (87.16%), Query Frame = 0
BLAST of Lsi05G006910 vs. NCBI nr
Match: KAA0046872.1 (uncharacterized protein E6C27_scaffold230G00270 [Cucumis melo var. makuwa] >TYK03274.1 uncharacterized protein E5676_scaffold298G001010 [Cucumis melo var. makuwa]) HSP 1 Score: 224.2 bits (570), Expect = 7.4e-55 Identity = 121/148 (81.76%), Postives = 129/148 (87.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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