Lsi05G006480 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G006480
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function, DUF538
Location	chr05: 8241465 .. 8242390 (+)
RNA-Seq Expression	Lsi05G006480
Synteny	Lsi05G006480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCATCAACAACAAAACAACTCTCTGCTCTTAAAATCCCCTTTTCTTCTCTTTTAATCCGCCATGGCCGCCTTCTTCCATTTCACCATTTTCTTCCTCATCTCTGTCTCTCTTCCCTCATATCTATCTCTCTCCCCCACCATTCACGACCTCCTCCGCTCCAAAGGCCTCCCACCTGGTCTTCTTCCAAAGGAAGTCAAATCCTACACCCTTTCCCCAAATGGCCTTCTCGAAGTCTTCTTAGATGGTCCTTGTTTGACTAAATACGAGAACAGAGTTCTTTTTCAAAGCGTTGTTAAAGCTAATCTCAGCTATGGAAGTCTGATTGGCGTTCAAGGTCTTACTCAGGAAGAGCTGTTTCTATGGCTTCCTGTTAAAGATATAATCGTCGATGATCCTAAATCTGGCTTGATTCTCTTTGACATTGGTGTTGCTCATAAACAACTCGCTCTTTCTCTCTTCGAAGATCCTCCCAGTTGCAAGACCCAACCTAAAGGTATATTCAAATTAGGGTTTCCAATTTCGATTTGAATTAAATCGATTGATGCTCTGTTATTGCTTGTGAATTTGGATTTTGTTGAAGATTCGATCTGGGGATTTGGTTAAAATAGATGAATTTGGCTTTTTGTGTAGGGGGTTTGAGGAATCATGTGTGGAAGGAGAAAGGATTTGAAGCTCTGAGATAGAAAGGAAAGGAAAATGCCAAAATCCTGCTGCAAAATTTTGTCTTTTTTTTTTTTTTTTCTTTTCTTTTTTTTTAATTATTTTATTTTTGTTCTGCCCCCAATGCCTATATAACTAAGTTAGTTCTAATAATAGTTTATACTGTTATACGAGTTACCAGAGTTGTTTTTTCGAACTCATTTCCTTTCCTTTTTTTTTTTCCTTTTTTGTATAAAAATGAAAAGACGAGTTTCCCTTTCTTGG

mRNA sequence

ATCATCAACAACAAAACAACTCTCTGCTCTTAAAATCCCCTTTTCTTCTCTTTTAATCCGCCATGGCCGCCTTCTTCCATTTCACCATTTTCTTCCTCATCTCTGTCTCTCTTCCCTCATATCTATCTCTCTCCCCCACCATTCACGACCTCCTCCGCTCCAAAGGCCTCCCACCTGGTCTTCTTCCAAAGGAAGTCAAATCCTACACCCTTTCCCCAAATGGCCTTCTCGAAGTCTTCTTAGATGGTCCTTGTTTGACTAAATACGAGAACAGAGTTCTTTTTCAAAGCGTTGTTAAAGCTAATCTCAGCTATGGAAGTCTGATTGGCGTTCAAGGTCTTACTCAGGAAGAGCTGTTTCTATGGCTTCCTGTTAAAGATATAATCGTCGATGATCCTAAATCTGGCTTGATTCTCTTTGACATTGGTGTTGCTCATAAACAACTCGCTCTTTCTCTCTTCGAAGATCCTCCCAGTTGCAAGACCCAACCTAAAGGGGGTTTGAGGAATCATGTGTGGAAGGAGAAAGGATTTGAAGCTCTGAGATAGAAAGGAAAGGAAAATGCCAAAATCCTGCTGCAAAATTTTGTCTTTTTTTTTTTTTTTTCTTTTCTTTTTTTTTAATTATTTTATTTTTGTTCTGCCCCCAATGCCTATATAACTAAGTTAGTTCTAATAATAGTTTATACTGTTATACGAGTTACCAGAGTTGTTTTTTCGAACTCATTTCCTTTCCTTTTTTTTTTTCCTTTTTTGTATAAAAATGAAAAGACGAGTTTCCCTTTCTTGG

Coding sequence (CDS)

ATGGCCGCCTTCTTCCATTTCACCATTTTCTTCCTCATCTCTGTCTCTCTTCCCTCATATCTATCTCTCTCCCCCACCATTCACGACCTCCTCCGCTCCAAAGGCCTCCCACCTGGTCTTCTTCCAAAGGAAGTCAAATCCTACACCCTTTCCCCAAATGGCCTTCTCGAAGTCTTCTTAGATGGTCCTTGTTTGACTAAATACGAGAACAGAGTTCTTTTTCAAAGCGTTGTTAAAGCTAATCTCAGCTATGGAAGTCTGATTGGCGTTCAAGGTCTTACTCAGGAAGAGCTGTTTCTATGGCTTCCTGTTAAAGATATAATCGTCGATGATCCTAAATCTGGCTTGATTCTCTTTGACATTGGTGTTGCTCATAAACAACTCGCTCTTTCTCTCTTCGAAGATCCTCCCAGTTGCAAGACCCAACCTAAAGGGGGTTTGAGGAATCATGTGTGGAAGGAGAAAGGATTTGAAGCTCTGAGATAG

Protein sequence

MAAFFHFTIFFLISVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR

Homology

[Close]

BLAST of Lsi05G006480 vs. ExPASy TrEMBL
Match: A0A0A0L572 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G088990 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.8e-70
Identity = 140/161 (86.96%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 6   HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFL 65
           HF+IF     LIS+SLPS LSL S TIHDLLRSKGLPPGLLPKEVKSY+LSPNGLL+VFL
Sbjct: 7   HFSIFIFYISLISLSLPSSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLKVFL 66

Query: 66  DGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 125
           DGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD
Sbjct: 67  DGPCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 126

Query: 126 IGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR 162
           IGVAHKQLALSLFEDPPSCK+Q KG LRNHV KEKGFE  R
Sbjct: 127 IGVAHKQLALSLFEDPPSCKSQSKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of Lsi05G006480 vs. ExPASy TrEMBL
Match: A0A5A7VEX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G001090 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 139/161 (86.34%), Postives = 146/161 (90.68%), Query Frame = 0


Query: 6   HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFL 65
           HF+IF     LIS+SLP  LSL S TIHDLLRSKGLPPGLLPKEVKSY+LSPNGLL+VFL
Sbjct: 7   HFSIFIFYISLISLSLPPSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLQVFL 66

Query: 66  DGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 125
           DGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDP SGLILFD
Sbjct: 67  DGPCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPNSGLILFD 126

Query: 126 IGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR 162
           IGVAHKQLALSLFEDPPSCK+QPKG LRNHV KEKGFE  R
Sbjct: 127 IGVAHKQLALSLFEDPPSCKSQPKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of Lsi05G006480 vs. ExPASy TrEMBL
Match: A0A1S3BUE7 (uncharacterized protein LOC103493397 OS=Cucumis melo OX=3656 GN=LOC103493397 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 139/161 (86.34%), Postives = 146/161 (90.68%), Query Frame = 0


Query: 6   HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFL 65
           HF+IF     LIS+SLP  LSL S TIHDLLRSKGLPPGLLPKEVKSY+LSPNGLL+VFL
Sbjct: 7   HFSIFIFYISLISLSLPPSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLQVFL 66

Query: 66  DGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 125
           DGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDP SGLILFD
Sbjct: 67  DGPCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPNSGLILFD 126

Query: 126 IGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR 162
           IGVAHKQLALSLFEDPPSCK+QPKG LRNHV KEKGFE  R
Sbjct: 127 IGVAHKQLALSLFEDPPSCKSQPKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of Lsi05G006480 vs. ExPASy TrEMBL
Match: A0A6J1JYV3 (uncharacterized protein LOC111489122 OS=Cucurbita maxima OX=3661 GN=LOC111489122 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 142/166 (85.54%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 2   AAFFH-FTIFFLI-----SVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGL 61
           A FFH FT+FF I     S+ LP  LSLS TIHDLLRS+GLP GLLPKEVKSYTLS NGL
Sbjct: 4   AFFFHNFTLFFYISLLFLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGL 63

Query: 62  LEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 121
           LEVFLDGPCLTKYENRVLF+SVV+ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG
Sbjct: 64  LEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 123

Query: 122 LILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR 162
           LILFDIGVAHKQLALSLFEDPPSCK QPK  LRN V KEKGFEALR
Sbjct: 124 LILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 169

[Close]

BLAST of Lsi05G006480 vs. ExPASy TrEMBL
Match: A0A6J1FV48 (uncharacterized protein LOC111447556 OS=Cucurbita moschata OX=3662 GN=LOC111447556 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.8e-69
Identity = 142/166 (85.54%), Postives = 146/166 (87.95%), Query Frame = 0


Query: 2   AAFFH-FTIFFLIS-----VSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGL 61
           A FFH FT FF IS     + LP  LSLS TIHDLLRS+GLP GLLPKEVKSYTLS NGL
Sbjct: 4   AFFFHNFTFFFYISLLSLPLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGL 63

Query: 62  LEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 121
           LEVFLDGPCLTKYENRVLF+SVV+ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG
Sbjct: 64  LEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 123

Query: 122 LILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR 162
           LILFDIGVAHKQLALSLFEDPPSCK QPK  LRN V KEKGFEALR
Sbjct: 124 LILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 169

[Close]

BLAST of Lsi05G006480 vs. NCBI nr
Match: XP_038905336.1 (uncharacterized protein LOC120091403 [Benincasa hispida])

HSP 1 Score: 303.1 bits (775), Expect = 1.4e-78
Identity = 154/166 (92.77%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MAAFFHFTIFF-----LISVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGL 60
           MAAFFHFTIFF     LIS+SLPS LSLS TIHDLLRSKGLPPGLLPKEVKSY+LSPNGL
Sbjct: 1   MAAFFHFTIFFTISLSLISLSLPSSLSLSSTIHDLLRSKGLPPGLLPKEVKSYSLSPNGL 60

Query: 61  LEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 120
           LEVFLDGPCLTKYENRVLFQSVV+ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG
Sbjct: 61  LEVFLDGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 120

Query: 121 LILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR 162
           LILFDIGVAHKQLALSLFEDPPSCK+QPKGGLRNHV KEKGFEALR
Sbjct: 121 LILFDIGVAHKQLALSLFEDPPSCKSQPKGGLRNHVRKEKGFEALR 166

[Close]

BLAST of Lsi05G006480 vs. NCBI nr
Match: XP_004149935.1 (uncharacterized protein LOC101212020 [Cucumis sativus] >KGN56179.1 hypothetical protein Csa_010423 [Cucumis sativus])

HSP 1 Score: 272.7 bits (696), Expect = 2.0e-69
Identity = 140/161 (86.96%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 6   HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFL 65
           HF+IF     LIS+SLPS LSL S TIHDLLRSKGLPPGLLPKEVKSY+LSPNGLL+VFL
Sbjct: 7   HFSIFIFYISLISLSLPSSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLKVFL 66

Query: 66  DGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 125
           DGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD
Sbjct: 67  DGPCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 126

Query: 126 IGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR 162
           IGVAHKQLALSLFEDPPSCK+Q KG LRNHV KEKGFE  R
Sbjct: 127 IGVAHKQLALSLFEDPPSCKSQSKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of Lsi05G006480 vs. NCBI nr
Match: XP_008452337.1 (PREDICTED: uncharacterized protein LOC103493397 [Cucumis melo] >KAA0065854.1 uncharacterized protein E6C27_scaffold17893G00010 [Cucumis melo var. makuwa] >TYK04789.1 uncharacterized protein E5676_scaffold68G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 272.3 bits (695), Expect = 2.6e-69
Identity = 139/161 (86.34%), Postives = 146/161 (90.68%), Query Frame = 0


Query: 6   HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFL 65
           HF+IF     LIS+SLP  LSL S TIHDLLRSKGLPPGLLPKEVKSY+LSPNGLL+VFL
Sbjct: 7   HFSIFIFYISLISLSLPPSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLQVFL 66

Query: 66  DGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD 125
           DGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDP SGLILFD
Sbjct: 67  DGPCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPNSGLILFD 126

Query: 126 IGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR 162
           IGVAHKQLALSLFEDPPSCK+QPKG LRNHV KEKGFE  R
Sbjct: 127 IGVAHKQLALSLFEDPPSCKSQPKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of Lsi05G006480 vs. NCBI nr
Match: XP_022992944.1 (uncharacterized protein LOC111489122 [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 3.4e-69
Identity = 142/166 (85.54%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 2   AAFFH-FTIFFLI-----SVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGL 61
           A FFH FT+FF I     S+ LP  LSLS TIHDLLRS+GLP GLLPKEVKSYTLS NGL
Sbjct: 4   AFFFHNFTLFFYISLLFLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGL 63

Query: 62  LEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 121
           LEVFLDGPCLTKYENRVLF+SVV+ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG
Sbjct: 64  LEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 123

Query: 122 LILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR 162
           LILFDIGVAHKQLALSLFEDPPSCK QPK  LRN V KEKGFEALR
Sbjct: 124 LILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 169

[Close]

BLAST of Lsi05G006480 vs. NCBI nr
Match: KAG6600749.1 (hypothetical protein SDJN03_05982, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031389.1 hypothetical protein SDJN02_05429, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.2 bits (692), Expect = 5.9e-69
Identity = 142/166 (85.54%), Postives = 146/166 (87.95%), Query Frame = 0


Query: 2   AAFFH-FTIFFLI-----SVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGL 61
           A FFH FT FF I     S+ LP  LSLS TIHDLLRS+GLP GLLPKEVKSYTLS NGL
Sbjct: 4   AFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGL 63

Query: 62  LEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 121
           LEVFLDGPCLTKYENRVLF+SVV+ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG
Sbjct: 64  LEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 123

Query: 122 LILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR 162
           LILFDIGVAHKQLALSLFEDPPSCK QPK  LRN V KEKGFEALR
Sbjct: 124 LILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 169

[Close]

BLAST of Lsi05G006480 vs. TAIR 10
Match: AT5G54530.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 186.8 bits (473), Expect = 1.4e-47
Identity = 92/152 (60.53%), Postives = 119/152 (78.29%), Query Frame = 0


Query: 8   TIFFLISVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTK 67
           T+   +S+S PSY    PT+HD+LRS+GLP GLLP+EV SY L  +G LEVFL  PC  K
Sbjct: 14  TLRLSLSLSSPSY----PTVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAK 73

Query: 68  YENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQ 127
           +E  V F++VV+ NLSYGSL+GV+GL+Q+ELFLWL VKDI+V++P SG+I+FDIGVA KQ
Sbjct: 74  FETNVHFEAVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQ 133

Query: 128 LALSLFEDPPSCKTQPKGGLRNHVWKEKGFEA 160
           L+LSLFEDPP CK  P G L+  + +++GFEA
Sbjct: 134 LSLSLFEDPPKCK--PDGVLKKKMRRDRGFEA 159

[Close]

BLAST of Lsi05G006480 vs. TAIR 10
Match: AT1G61667.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 160.6 bits (405), Expect = 1.0e-39
Identity = 79/135 (58.52%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 22  SLSPTIHDLLRSKGLPPGLLPKEVKSYTL-SPNGLLEVFLDGPCLTKYENRVLFQSVVKA 81
           S   +I +LL ++GLP GL P  V+SY+L    G LEV L  PC  ++ENRV F  V+KA
Sbjct: 17  SSQSSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNPCFARFENRVYFDRVIKA 76

Query: 82  NLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCK 141
           NLSYG L+G++GLTQEELFLWLPVK I V+DP SGL+LFDIGVAHKQ++ SLFEDPP C 
Sbjct: 77  NLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQISRSLFEDPPVC- 136

Query: 142 TQPKGGLRNHVWKEK 156
             P G +   + K K
Sbjct: 137 -YPPGSIMEKLEKSK 149

[Close]

BLAST of Lsi05G006480 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-24
Identity = 52/126 (41.27%), Postives = 78/126 (61.90%), Query Frame = 0


Query: 15  VSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLS-PNGLLEVFLDGPCLTKYENRVL 74
           +S+ + ++ + +I ++L + GLP GL PK VK +T++   G   V+L+  C  KYE  + 
Sbjct: 18  ISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELH 77

Query: 75  FQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLF 134
           +  +V   + Y  +  + G++ +ELFLWL VK I VD P SGLI FD+GV  KQ +LSLF
Sbjct: 78  YDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLF 137

Query: 135 EDPPSC 140
           E P  C
Sbjct: 138 ETPRDC 143

[Close]

BLAST of Lsi05G006480 vs. TAIR 10
Match: AT3G07460.2 (Protein of unknown function, DUF538 )

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-24
Identity = 52/126 (41.27%), Postives = 78/126 (61.90%), Query Frame = 0


Query: 15  VSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLS-PNGLLEVFLDGPCLTKYENRVL 74
           +S+ + ++ + +I ++L + GLP GL PK VK +T++   G   V+L+  C  KYE  + 
Sbjct: 18  ISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELH 77

Query: 75  FQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLF 134
           +  +V   + Y  +  + G++ +ELFLWL VK I VD P SGLI FD+GV  KQ +LSLF
Sbjct: 78  YDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLF 137

Query: 135 EDPPSC 140
           E P  C
Sbjct: 138 ETPRDC 143

[Close]

BLAST of Lsi05G006480 vs. TAIR 10
Match: AT5G16380.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 107.5 bits (267), Expect = 1.0e-23
Identity = 64/146 (43.84%), Postives = 86/146 (58.90%), Query Frame = 0


Query: 9   IFFLI-----SVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLS-PNGLLEVFLD 68
           +FFLI     S+  P   SL  P+ +D LR   LP G++PK V ++++    G   V L 
Sbjct: 7   LFFLIIVLFSSILFPQLSSLPDPSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALP 66

Query: 69  GPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDI 128
            PC  K+EN+  F   +   LS G +  + G+TQ+ELFLW  VK I VD   SGLI FD+
Sbjct: 67  VPCDAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDV 126

Query: 129 GVAHKQLALSLFEDPPSC---KTQPK 145
           GVA KQL+LSLFE P  C   ++QP+
Sbjct: 127 GVADKQLSLSLFESPRDCTAAESQPR 152

The following BLAST results are available for this feature:

BLAST of Lsi05G006480 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi05G006480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L572	9.8e-70	86.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G088990 PE=4 SV=1	[more]
A0A5A7VEX6	1.3e-69	86.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BUE7	1.3e-69	86.34	uncharacterized protein LOC103493397 OS=Cucumis melo OX=3656 GN=LOC103493397 PE=...	[more]
A0A6J1JYV3	1.7e-69	85.54	uncharacterized protein LOC111489122 OS=Cucurbita maxima OX=3661 GN=LOC111489122...	[more]
A0A6J1FV48	2.8e-69	85.54	uncharacterized protein LOC111447556 OS=Cucurbita moschata OX=3662 GN=LOC1114475...	[more]

BLAST of Lsi05G006480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905336.1	1.4e-78	92.77	uncharacterized protein LOC120091403 [Benincasa hispida]	[more]
XP_004149935.1	2.0e-69	86.96	uncharacterized protein LOC101212020 [Cucumis sativus] >KGN56179.1 hypothetical ...	[more]
XP_008452337.1	2.6e-69	86.34	PREDICTED: uncharacterized protein LOC103493397 [Cucumis melo] >KAA0065854.1 unc...	[more]
XP_022992944.1	3.4e-69	85.54	uncharacterized protein LOC111489122 [Cucurbita maxima]	[more]
KAG6600749.1	5.9e-69	85.54	hypothetical protein SDJN03_05982, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lsi05G006480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54530.1	1.4e-47	60.53	Protein of unknown function, DUF538	[more]
AT1G61667.1	1.0e-39	58.52	Protein of unknown function, DUF538	[more]
AT3G07460.1	2.1e-24	41.27	Protein of unknown function, DUF538	[more]
AT3G07460.2	2.1e-24	41.27	Protein of unknown function, DUF538	[more]
AT5G16380.1	1.0e-23	43.84	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 20..141 e-value: 1.6E-26 score: 94.7
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 9..141
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 28..134 e-value: 4.1E-26 score: 91.6
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 8..160
None	No IPR available	PANTHER	PTHR31676:SF118	SUBFAMILY NOT NAMED	coord: 8..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G006480.1	Lsi05G006480.1	mRNA