Lsi05G005960 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G005960
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ATP synthase gamma chain
Location	chr05: 7388893 .. 7389945 (-)
RNA-Seq Expression	Lsi05G005960
Synteny	Lsi05G005960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCACTTTCTCGAACCCAAATTCCACCAAACCTCATTTACCCCTCTCCGCCGCATCCCCAAATCTCCACCGCCCATTTCTATCCGATGCGGCGGTGCCACCCGCGAGCTCCGATCCCGACTAGACTCCATCAAGAACACCCAGAAGCTCACCGAAGCCATGAAGCTCATCGCCGCCGCTAAAGTCCGACGAGCCCAAGAAGCCGTAATCAACAGCCGCCCCTTCTCCCAATCCCTCGCCCAATTTCTCCATTTCATCACCCAACAAATCCAACGAGACGACATCGATTTCCCCTTTCTAAACCCTAGACCCGTCAGAAAAGTCGCCGTCGTCGTCTTCACCGGCGATCGAGGCCTCTGTGGGGGTTTCAACGCTTCGGTAATAAAAAAGGCCGAGACCCGATTGGCCGAATTGAAAAACCTCGATCTGGGTCACACCCTAATCAGCGTCGGGAAAAAGGGCAACTCGCATTTCCGCCGCCGGTCCGATGTTGAAGTCGATCGGTTCATAACCGGCTGCGGCGGCGTTTCAGTACCCACAGCAAAAGAAGCTCAAGCCATAGCAGATATTGTGTTTTCTCTGTTCATCAGCGAAGAAGTGGACAAAGTGGAAGTAATTTACACAAAATTCGTTTCGTTGCTGAAATCGGAGCCTGTGATTGAGGCATTGCTGCCATTGTTGGGGGAAGGGGAAGCCATGGGAGATGGGGGGTTTAGATTGACGACGGCGGAGGGGAAATTGAAGGTGGAGAGAGAGGGGAAAAGGGGGAAATTAGGGGAAATATCGCCATTGTTGGAGTTTGAACAAGACCCAGTTCAGATTTTGGATGGGATGATGGCTTTGTATTTGAACAGCCAGATTTTGAGGGCTTTGCAGGAATCTATGGCGAGTGAGGTAGCGGCGAGGATGAATGCCATGAGTAATGCTTCTGAGAACGCAATGGAGTTGAAGAAATCTGTTTCGATTGCTTATAATCGAGAGAGACAGGCCAAGATTACTGGGGAGATTTTGGAAATTGTTGCTGGAACTGAAGCTCTCGAGGGATTTTGA

mRNA sequence

ATGACTCACTTTCTCGAACCCAAATTCCACCAAACCTCATTTACCCCTCTCCGCCGCATCCCCAAATCTCCACCGCCCATTTCTATCCGATGCGGCGGTGCCACCCGCGAGCTCCGATCCCGACTAGACTCCATCAAGAACACCCAGAAGCTCACCGAAGCCATGAAGCTCATCGCCGCCGCTAAAGTCCGACGAGCCCAAGAAGCCGTAATCAACAGCCGCCCCTTCTCCCAATCCCTCGCCCAATTTCTCCATTTCATCACCCAACAAATCCAACGAGACGACATCGATTTCCCCTTTCTAAACCCTAGACCCGTCAGAAAAGTCGCCGTCGTCGTCTTCACCGGCGATCGAGGCCTCTGTGGGGGTTTCAACGCTTCGGTAATAAAAAAGGCCGAGACCCGATTGGCCGAATTGAAAAACCTCGATCTGGGTCACACCCTAATCAGCGTCGGGAAAAAGGGCAACTCGCATTTCCGCCGCCGGTCCGATGTTGAAGTCGATCGGTTCATAACCGGCTGCGGCGGCGTTTCAGTACCCACAGCAAAAGAAGCTCAAGCCATAGCAGATATTGTGTTTTCTCTGTTCATCAGCGAAGAAGTGGACAAAGTGGAAGTAATTTACACAAAATTCGTTTCGTTGCTGAAATCGGAGCCTGTGATTGAGGCATTGCTGCCATTGTTGGGGGAAGGGGAAGCCATGGGAGATGGGGGGTTTAGATTGACGACGGCGGAGGGGAAATTGAAGGTGGAGAGAGAGGGGAAAAGGGGGAAATTAGGGGAAATATCGCCATTGTTGGAGTTTGAACAAGACCCAGTTCAGATTTTGGATGGGATGATGGCTTTGTATTTGAACAGCCAGATTTTGAGGGCTTTGCAGGAATCTATGGCGAGTGAGGTAGCGGCGAGGATGAATGCCATGAGTAATGCTTCTGAGAACGCAATGGAGTTGAAGAAATCTGTTTCGATTGCTTATAATCGAGAGAGACAGGCCAAGATTACTGGGGAGATTTTGGAAATTGTTGCTGGAACTGAAGCTCTCGAGGGATTTTGA

Coding sequence (CDS)

ATGACTCACTTTCTCGAACCCAAATTCCACCAAACCTCATTTACCCCTCTCCGCCGCATCCCCAAATCTCCACCGCCCATTTCTATCCGATGCGGCGGTGCCACCCGCGAGCTCCGATCCCGACTAGACTCCATCAAGAACACCCAGAAGCTCACCGAAGCCATGAAGCTCATCGCCGCCGCTAAAGTCCGACGAGCCCAAGAAGCCGTAATCAACAGCCGCCCCTTCTCCCAATCCCTCGCCCAATTTCTCCATTTCATCACCCAACAAATCCAACGAGACGACATCGATTTCCCCTTTCTAAACCCTAGACCCGTCAGAAAAGTCGCCGTCGTCGTCTTCACCGGCGATCGAGGCCTCTGTGGGGGTTTCAACGCTTCGGTAATAAAAAAGGCCGAGACCCGATTGGCCGAATTGAAAAACCTCGATCTGGGTCACACCCTAATCAGCGTCGGGAAAAAGGGCAACTCGCATTTCCGCCGCCGGTCCGATGTTGAAGTCGATCGGTTCATAACCGGCTGCGGCGGCGTTTCAGTACCCACAGCAAAAGAAGCTCAAGCCATAGCAGATATTGTGTTTTCTCTGTTCATCAGCGAAGAAGTGGACAAAGTGGAAGTAATTTACACAAAATTCGTTTCGTTGCTGAAATCGGAGCCTGTGATTGAGGCATTGCTGCCATTGTTGGGGGAAGGGGAAGCCATGGGAGATGGGGGGTTTAGATTGACGACGGCGGAGGGGAAATTGAAGGTGGAGAGAGAGGGGAAAAGGGGGAAATTAGGGGAAATATCGCCATTGTTGGAGTTTGAACAAGACCCAGTTCAGATTTTGGATGGGATGATGGCTTTGTATTTGAACAGCCAGATTTTGAGGGCTTTGCAGGAATCTATGGCGAGTGAGGTAGCGGCGAGGATGAATGCCATGAGTAATGCTTCTGAGAACGCAATGGAGTTGAAGAAATCTGTTTCGATTGCTTATAATCGAGAGAGACAGGCCAAGATTACTGGGGAGATTTTGGAAATTGTTGCTGGAACTGAAGCTCTCGAGGGATTTTGA

Protein sequence

MTHFLEPKFHQTSFTPLRRIPKSPPPISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAAAKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGLCGGFNASVIKKAETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVPTAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGEAMGDGGFRLTTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEVAARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEALEGF

Homology

[Close]

BLAST of Lsi05G005960 vs. ExPASy Swiss-Prot
Match: Q01908 (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATPC1 PE=1 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.3e-108
Identity = 220/345 (63.77%), Postives = 265/345 (76.81%), Query Frame = 0


Query: 12  TSFTPLRRIPKSPPPISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAAAKVRRAQEAVI 71
           TS  P R    SP   S+      RELR R+DS+KNTQK+TEAMKL+AAAKVRRAQEAV+
Sbjct: 36  TSSPPSRASSVSPLQASL------RELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVV 95

Query: 72  NSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGLCGGFNASVIKK 131
           N RPFS++L + L+ I +Q+Q DD+D P    RPV+KVA+VV TGDRGLCGGFN  +IKK
Sbjct: 96  NGRPFSETLVEVLYNINEQLQTDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKK 155

Query: 132 AETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVPTAKEAQAIADI 191
           AE R+ ELK L L +T+ISVGKKGNS+F RR  + VD+++      ++PTAKEAQA+AD 
Sbjct: 156 AEARIKELKGLGLEYTVISVGKKGNSYFLRRPYIPVDKYLE---AGTLPTAKEAQAVADD 215

Query: 192 VFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGE----------AMGDGGFRL 251
           VFSLFISEEVDKVE++YTKFVSL+KSEPVI  LLPL  +GE          A  D  FRL
Sbjct: 216 VFSLFISEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGTCVDAAEDEFFRL 275

Query: 252 TTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEVA 311
           TT EGKL VERE  R    + SP+L+FEQDPVQILD ++ LYLNSQILRALQES+ASE+A
Sbjct: 276 TTKEGKLTVERETFRTPTADFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELA 335

Query: 312 ARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEA 347
           ARM+AMS+AS+NA +LKKS+S+ YNR+RQAKITGEILEIVAG  A
Sbjct: 336 ARMSAMSSASDNASDLKKSLSMVYNRKRQAKITGEILEIVAGANA 371

[Close]

BLAST of Lsi05G005960 vs. ExPASy Swiss-Prot
Match: P29790 (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPC PE=1 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.5e-107
Identity = 212/329 (64.44%), Postives = 263/329 (79.94%), Query Frame = 0


Query: 29  IRCGGATRELRSRLDSIKNTQKLTEAMKLIAAAKVRRAQEAVINSRPFSQSLAQFLHFIT 88
           + CG   R+LR R++S+KNTQK+TEAMKL+AAAKVRRAQEAV+ +RPFS++L + L+ I 
Sbjct: 53  VHCG--LRDLRDRIESVKNTQKITEAMKLVAAAKVRRAQEAVVGARPFSETLVEVLYNIN 112

Query: 89  QQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGLCGGFNASVIKKAETRLAELKNLDLGHTL 148
           +Q+Q DDID P    RPV+KVA+VV TGDRGLCGGFN  +IKKAE R+ +LK L + +T+
Sbjct: 113 EQLQTDDIDVPLTKVRPVKKVALVVVTGDRGLCGGFNNYLIKKAEARIRDLKALGIDYTI 172

Query: 149 ISVGKKGNSHFRRRSDVEVDRFITGCGGVSVPTAKEAQAIADIVFSLFISEEVDKVEVIY 208
           ISVGKKGNS+F RR  + VD+F+ G    ++PTAK+AQAIAD VFSLF+SEEVDKVE++Y
Sbjct: 173 ISVGKKGNSYFIRRPYIPVDKFLEGS---NLPTAKDAQAIADDVFSLFVSEEVDKVELLY 232

Query: 209 TKFVSLLKSEPVIEALLPLLGEGE----------AMGDGGFRLTTAEGKLKVEREGKRGK 268
           TKFVSL+KSEPVI  LLPL  +GE          A  D  FRLTT EGKL VER+  R K
Sbjct: 233 TKFVSLVKSEPVIHTLLPLSPKGEICDINGNCVDAANDEFFRLTTKEGKLTVERDIIRTK 292

Query: 269 LGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEVAARMNAMSNASENAMELK 328
             + SP+L+FEQDPVQILD ++ LYLNSQILRALQES+ASE+AARM+AMS+A++NA ELK
Sbjct: 293 TTDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNATELK 352

Query: 329 KSVSIAYNRERQAKITGEILEIVAGTEAL 348
           K++S  YNR+RQAKITGEILEIVAG +AL
Sbjct: 353 KNLSRVYNRQRQAKITGEILEIVAGADAL 376

[Close]

BLAST of Lsi05G005960 vs. ExPASy Swiss-Prot
Match: Q01909 (ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATPC2 PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.0e-105
Identity = 217/346 (62.72%), Postives = 267/346 (77.17%), Query Frame = 0


Query: 13  SFTPLRRIPKSP-PPISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAAAKVRRAQEAVI 72
           S TP R   +SP P I IR G   RELR R+DS+KNTQK+TEAM+L+AAA+VRRAQ+AVI
Sbjct: 42  SLTPNRISSRSPLPSIQIRAG--IRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVI 101

Query: 73  NSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGLCGGFNASVIKK 132
             RPF+++L + L+ I Q  Q +DIDFP    RPV++VA+VV TGD+GLCGGFN +V KK
Sbjct: 102 KGRPFTETLVEILYSINQSAQLEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKK 161

Query: 133 AETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVPTAKEAQAIADI 192
           A  R+ ELK   +   +ISVGKKGN++F RR + +VD+ I G GGV  PT KEAQ IAD 
Sbjct: 162 ATLRVQELKQRGIDCVVISVGKKGNAYFSRRDEFDVDKCIEG-GGV-FPTTKEAQVIADD 221

Query: 193 VFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGE----------AMGDGGFRL 252
           VFSLF+SEEVDKVE++YTKFVSL+KS+PVI  LLPL  +GE          A+ D  FRL
Sbjct: 222 VFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGESCDVKGECVDAIEDEMFRL 281

Query: 253 TTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEVA 312
           T+ +GKL VER     +  EISPL++FEQDPVQILD MM LYLNSQILRALQES+ASE+A
Sbjct: 282 TSKDGKLAVERTKLEVEKPEISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELA 341

Query: 313 ARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEAL 348
           +RMNAMSNA++NA+ELKK++++AYNR RQAKITGE+LEIVAG EAL
Sbjct: 342 SRMNAMSNATDNAVELKKNLTMAYNRARQAKITGELLEIVAGAEAL 383

[Close]

BLAST of Lsi05G005960 vs. ExPASy Swiss-Prot
Match: P0C1M0 (ATP synthase subunit gamma, chloroplastic OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.3e-105
Identity = 203/338 (60.06%), Postives = 271/338 (80.18%), Query Frame = 0


Query: 22  KSPPPISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAAAKVRRAQEAVINSRPFSQSLA 81
           +SPP   +    + RELR+R+DS++NTQK+TEAMKL+AAAKVRRAQEAV++SRPFS++L 
Sbjct: 25  RSPPRSGLLVRCSLRELRTRIDSVRNTQKITEAMKLVAAAKVRRAQEAVVSSRPFSEALV 84

Query: 82  QFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGLCGGFNASVIKKAETRLAELKN 141
           + L+ + Q+IQ +DID P    RPV+KVA+VV TG+RGLCG FN +V+KKAETR+ ELK 
Sbjct: 85  EVLYNMNQEIQTEDIDLPLTRTRPVKKVALVVLTGERGLCGSFNNNVLKKAETRIDELKQ 144

Query: 142 LDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVPTAKEAQAIADIVFSLFISEEV 201
           L L +T++SVGKKGN++F+RR  + ++R +      SVPT K++QAI D+V+SLF+SEEV
Sbjct: 145 LGLQYTVVSVGKKGNAYFQRRPYIPLERDLEVS---SVPTVKDSQAICDLVYSLFVSEEV 204

Query: 202 DKVEVIYTKFVSLLKSEPVIEALLPLLGEGE----------AMGDGGFRLTTAEGKLKVE 261
           DKVE++Y+KFVSL++S+P+I+ LLP+  +GE          A  D  FRLTT EGKL VE
Sbjct: 205 DKVELLYSKFVSLVRSDPIIQTLLPMSPKGEICDVNGVCVDATEDELFRLTTKEGKLTVE 264

Query: 262 REGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEVAARMNAMSNAS 321
           RE  + +    SP+++FEQDPVQILD ++ LYLNSQILRALQES+ASE+AARM+AMS+A+
Sbjct: 265 REKVKIETQPFSPVVQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSAT 324

Query: 322 ENAMELKKSVSIAYNRERQAKITGEILEIVAGTEALEG 350
           +NA+EL+K++SIAYNR+RQAKITGEILEIVAG +AL G
Sbjct: 325 DNAIELRKNLSIAYNRQRQAKITGEILEIVAGADALAG 359

[Close]

BLAST of Lsi05G005960 vs. ExPASy Swiss-Prot
Match: P28552 (ATP synthase gamma chain, chloroplastic OS=Pisum sativum OX=3888 GN=ATPC PE=2 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.3e-105
Identity = 208/328 (63.41%), Postives = 258/328 (78.66%), Query Frame = 0


Query: 26  PISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAAAKVRRAQEAVINSRPFSQSLAQFLH 85
           P SI+CG   ++L++R+DS+KNTQK+TEAMKL+AAAKVRRAQEAV+N RPFS++L + L+
Sbjct: 47  PTSIQCG--LKDLKNRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLY 106

Query: 86  FITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGLCGGFNASVIKKAETRLAELKNLDLG 145
            I +Q+Q DDI+ P    RPV+KVA+VV TGDRGLCGGFN +++KKAE R+AELK L L 
Sbjct: 107 SINEQLQTDDIESPLTKLRPVKKVALVVCTGDRGLCGGFNNAILKKAEARIAELKELGLE 166

Query: 146 HTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVPTAKEAQAIADIVFSLFISEEVDKVE 205
           +T++SVG+KGNS+F RR  + VDRF+    G S+PTAKEAQ IAD VFSLF+SEEVDKVE
Sbjct: 167 YTVVSVGRKGNSYFNRRPYIPVDRFLE---GGSLPTAKEAQTIADDVFSLFVSEEVDKVE 226

Query: 206 VIYTKFVSLLKSEPVIEALLPLLGEGE----------AMGDGGFRLTTAEGKLKVEREGK 265
           ++YTKFVSL+KS P+I  LLPL  +GE          A  D  FRLTT EGKL VER+  
Sbjct: 227 LLYTKFVSLVKSNPIIHTLLPLSPKGEICDINGNCVDAAEDELFRLTTKEGKLTVERDVI 286

Query: 266 RGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEVAARMNAMSNASENAM 325
           R K  + SP+L+FEQDPVQILD ++ LYLNSQILR LQES+ASE+AARM+AMS+A +NA 
Sbjct: 287 RSKTVDFSPILQFEQDPVQILDALLPLYLNSQILRPLQESLASELAARMSAMSSAFDNAS 346

Query: 326 ELKKSVSIAYNRERQAKITGEILEIVAG 344
           ELK  ++  YNR  QAKITGEILEIVAG
Sbjct: 347 ELKTDLTRVYNRATQAKITGEILEIVAG 369

[Close]

BLAST of Lsi05G005960 vs. ExPASy TrEMBL
Match: A0A5D3BSB8 (ATP synthase gamma chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00250 PE=3 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 4.6e-173
Identity = 325/350 (92.86%), Postives = 335/350 (95.71%), Query Frame = 0


Query: 1   MTHFLEPKFHQTSFTPLRRIPKSPPPISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAA 60
           M H LEPKFHQT    LRRIPKSP PISIRCGGATRELRSRLDSIKNTQKLTEAMKL+AA
Sbjct: 1   MIHSLEPKFHQTPLPLLRRIPKSPHPISIRCGGATRELRSRLDSIKNTQKLTEAMKLVAA 60

Query: 61  AKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGL 120
           AKVRRAQEAVINSRPFSQSLAQFLHFITQQIQR+DIDFPFLNPRPVRKVAVVVFTGDRGL
Sbjct: 61  AKVRRAQEAVINSRPFSQSLAQFLHFITQQIQREDIDFPFLNPRPVRKVAVVVFTGDRGL 120

Query: 121 CGGFNASVIKKAETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVP 180
           CGGFNASV+KKAETRLAELKNL+LGHTLISVGKKGN +FRRRSD+EVDRFITGC GVS+P
Sbjct: 121 CGGFNASVLKKAETRLAELKNLNLGHTLISVGKKGNPYFRRRSDIEVDRFITGCSGVSLP 180

Query: 181 TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGEAMGDGGFR 240
           TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIE LLPLLGEGEAMGDGGFR
Sbjct: 181 TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIETLLPLLGEGEAMGDGGFR 240

Query: 241 LTTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV 300
           LTTAEGKL VEREGK G+LGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV
Sbjct: 241 LTTAEGKLTVEREGKGGELGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV 300

Query: 301 AARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEALEGF 351
           AARMNAMSNASENAMELKKSV+ AYNRERQAKITGEILEIVAG EAL+ F
Sbjct: 301 AARMNAMSNASENAMELKKSVTSAYNRERQAKITGEILEIVAGAEALKEF 350

[Close]

BLAST of Lsi05G005960 vs. ExPASy TrEMBL
Match: A0A0A0L6B0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077620 PE=3 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 6.6e-172
Identity = 321/350 (91.71%), Postives = 336/350 (96.00%), Query Frame = 0


Query: 1   MTHFLEPKFHQTSFTPLRRIPKSPPPISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAA 60
           M H LEPKFHQT F+ LRRIPKSP PISIRCGG TRELRSRLDSIKNTQKLTEAMKL+AA
Sbjct: 1   MIHSLEPKFHQTPFSLLRRIPKSPHPISIRCGGTTRELRSRLDSIKNTQKLTEAMKLVAA 60

Query: 61  AKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGL 120
           AKVRRAQEAVINSRPFSQSLAQFLHF+TQQIQR+DIDFPFLNPRPV KVAVVVFTGDRGL
Sbjct: 61  AKVRRAQEAVINSRPFSQSLAQFLHFLTQQIQREDIDFPFLNPRPVGKVAVVVFTGDRGL 120

Query: 121 CGGFNASVIKKAETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVP 180
           CGGFNASVIKKAE RLAELKNL++GHT+IS+GKKGNS+FRRRSD+EVDRFITG GGVS+P
Sbjct: 121 CGGFNASVIKKAEARLAELKNLNMGHTVISIGKKGNSYFRRRSDIEVDRFITGGGGVSLP 180

Query: 181 TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGEAMGDGGFR 240
           TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPV+E LLPLLGEGEAMGDGGFR
Sbjct: 181 TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVVETLLPLLGEGEAMGDGGFR 240

Query: 241 LTTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV 300
           LTTAEGKL VEREGK G+LGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV
Sbjct: 241 LTTAEGKLTVEREGKGGELGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV 300

Query: 301 AARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEALEGF 351
           AARMNAMSNASENAMELKKSV+IAYNRERQAKITGEILEIVAG EAL+ F
Sbjct: 301 AARMNAMSNASENAMELKKSVTIAYNRERQAKITGEILEIVAGAEALKEF 350

[Close]

BLAST of Lsi05G005960 vs. ExPASy TrEMBL
Match: A0A6J1F0S3 (ATP synthase gamma chain 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111438451 PE=3 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.6e-162
Identity = 307/352 (87.22%), Postives = 325/352 (92.33%), Query Frame = 0


Query: 1   MTHFLEPKFHQTSFTP-LRRIPKSPPPISIRC-GGATRELRSRLDSIKNTQKLTEAMKLI 60
           MTHFLEP+FHQT F P LRRIPKSPP ISIRC GG  R+L+SRLDSI NTQKLTEAMKL+
Sbjct: 1   MTHFLEPRFHQTPFPPLLRRIPKSPPSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLV 60

Query: 61  AAAKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDR 120
           +AAKVRRAQEAVINSRPF+QSLAQFLHFITQQIQ  +IDFPFLNP PV KVA+VVFTGDR
Sbjct: 61  SAAKVRRAQEAVINSRPFAQSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDR 120

Query: 121 GLCGGFNASVIKKAETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVS 180
           GLCGGFNASVIK A+TRLAELKNLDLGH LISVGKKGNSHFRRRSDV+VD++ITGCGG S
Sbjct: 121 GLCGGFNASVIKTADTRLAELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGS 180

Query: 181 VPTAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGEAMGDGG 240
           VPTAKEAQ IADIVFSLFISEEVDKVE+IYTKFVS LKSEPVIE LLPLLG+GE MGDGG
Sbjct: 181 VPTAKEAQTIADIVFSLFISEEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGEGMGDGG 240

Query: 241 FRLTTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMAS 300
           FRLTT EGKLKVEREGKRG L EI  LLEFEQDPVQILDGM+ALYLNSQILRALQESMAS
Sbjct: 241 FRLTTKEGKLKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMAS 300

Query: 301 EVAARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEALEGF 351
           EVAARMNAMSNASENA+ELK SV +AYNRERQAKITGEILEIVAG EAL+GF
Sbjct: 301 EVAARMNAMSNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQGF 352

[Close]

BLAST of Lsi05G005960 vs. ExPASy TrEMBL
Match: A0A6J1JD36 (ATP synthase gamma chain 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111483294 PE=3 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.5e-160
Identity = 306/352 (86.93%), Postives = 323/352 (91.76%), Query Frame = 0


Query: 1   MTHFLEPKFHQTSF-TPLRRIPKSPPPISIRC-GGATRELRSRLDSIKNTQKLTEAMKLI 60
           MTHFLEP+FHQT F T LRRIPKSPPPISIRC GG  R+L+SRL SI NTQKLTEAMKL+
Sbjct: 1   MTHFLEPRFHQTPFPTLLRRIPKSPPPISIRCRGGGARDLQSRLHSINNTQKLTEAMKLV 60

Query: 61  AAAKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDR 120
           AAAKVRRAQEAVINSRPF+QSLAQFLHFITQQIQ  +IDFPFL P PV KVA+VVFTGDR
Sbjct: 61  AAAKVRRAQEAVINSRPFAQSLAQFLHFITQQIQPHEIDFPFLIPAPVGKVALVVFTGDR 120

Query: 121 GLCGGFNASVIKKAETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVS 180
           GLCGGFNASVIKKA+TRLAELKNLDLGH LISVGKKGNSHFRRRSDV+VD++IT CGG S
Sbjct: 121 GLCGGFNASVIKKADTRLAELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITSCGGGS 180

Query: 181 VPTAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGEAMGDGG 240
           VPTAKEAQ IADIVFSLFISEEVDKVE+IYTKFVSLL  EPVIE LLPLLG+ EAMGDGG
Sbjct: 181 VPTAKEAQTIADIVFSLFISEEVDKVELIYTKFVSLLNCEPVIETLLPLLGDREAMGDGG 240

Query: 241 FRLTTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMAS 300
           FRLTT EGKLKVEREGKRG L EI  LLEFEQDPVQILDGM+ALYLNSQILRALQESMAS
Sbjct: 241 FRLTTKEGKLKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMAS 300

Query: 301 EVAARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEALEGF 351
           EVAARMNAMSNASENA+ELK SV +AYNRERQAKITGEILEIVAG EAL+GF
Sbjct: 301 EVAARMNAMSNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQGF 352

[Close]

BLAST of Lsi05G005960 vs. ExPASy TrEMBL
Match: A0A7J7H7E1 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_014839 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.6e-115
Identity = 234/337 (69.44%), Postives = 274/337 (81.31%), Query Frame = 0


Query: 21  PKSPPPISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAAAKVRRAQEAVINSRPFSQSL 80
           P S    SIRCG   RELR R+D++KNTQK+TEAMKL++AAKVRRAQEAVINSRPFS++L
Sbjct: 41  PDSLTVPSIRCG--LRELRERIDTVKNTQKITEAMKLVSAAKVRRAQEAVINSRPFSETL 100

Query: 81  AQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGLCGGFNASVIKKAETRLAELK 140
            +FL+ I +Q+Q +D+D P  N RPV+KVA+VV TGDRGLCGGFNA+++KKAETR+AELK
Sbjct: 101 VEFLYSINEQLQLEDVDVPLTNVRPVKKVALVVVTGDRGLCGGFNAAILKKAETRIAELK 160

Query: 141 NLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVPTAKEAQAIADIVFSLFISEE 200
            + L +T+ISVGKKGNS+FRRR +V VD FI    G S PTAKEAQ IAD VFSLF+SEE
Sbjct: 161 EIGLDYTVISVGKKGNSYFRRRPNVHVDWFIE---GGSFPTAKEAQMIADDVFSLFVSEE 220

Query: 201 VDKVEVIYTKFVSLLKSEPVIEALLPLLGEGE----------AMGDGGFRLTTAEGKLKV 260
           VDKVE++YTKFVSL+KS+PVI  LLPL  +GE          A  D  FRLTT EGKL V
Sbjct: 221 VDKVELLYTKFVSLIKSDPVIHTLLPLSAKGEVCDVNGICVDASDDEFFRLTTKEGKLIV 280

Query: 261 EREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEVAARMNAMSNA 320
           ER+  R K  E SP L+FEQDPVQILD MM LYLNSQILRALQES+ASE+AARM AMSNA
Sbjct: 281 ERDSLRSKKDEFSPNLQFEQDPVQILDAMMPLYLNSQILRALQESLASELAARMGAMSNA 340

Query: 321 SENAMELKKSVSIAYNRERQAKITGEILEIVAGTEAL 348
           ++NA+ELKK++SIAYNRERQAKIT EILEIVAGTEAL
Sbjct: 341 TDNAVELKKTLSIAYNRERQAKITNEILEIVAGTEAL 372

[Close]

BLAST of Lsi05G005960 vs. NCBI nr
Match: XP_038905281.1 (ATP synthase gamma chain 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 618.6 bits (1594), Expect = 3.3e-173
Identity = 324/350 (92.57%), Postives = 334/350 (95.43%), Query Frame = 0


Query: 1   MTHFLEPKFHQTSFTPLRRIPKSPPPISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAA 60
           MTH LEPKFHQT F  LRR PKSP PISIRCGG TRELRSRLDSIKNTQKLTEAMKL+AA
Sbjct: 1   MTHSLEPKFHQTPFPLLRRSPKSPRPISIRCGGTTRELRSRLDSIKNTQKLTEAMKLVAA 60

Query: 61  AKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGL 120
           AKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRP+RKVAVVVFTGDRGL
Sbjct: 61  AKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPIRKVAVVVFTGDRGL 120

Query: 121 CGGFNASVIKKAETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVP 180
           CGGFNASVIKKAETRLAELK+LDLGHTLIS+GKKGNSHFRRRSDVEVDRFITGCGG  VP
Sbjct: 121 CGGFNASVIKKAETRLAELKDLDLGHTLISIGKKGNSHFRRRSDVEVDRFITGCGG--VP 180

Query: 181 TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGEAMGDGGFR 240
           T K+AQ IADIVFSLFISEEVDKVE IYTKFVSLLKSEPVIE LLPLLGEGEAMGDGGFR
Sbjct: 181 TVKDAQTIADIVFSLFISEEVDKVETIYTKFVSLLKSEPVIETLLPLLGEGEAMGDGGFR 240

Query: 241 LTTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV 300
           LTTA+GKL VEREGKRG++GEISPLLEFEQDPVQILDGMMALYLNSQILR LQESMASEV
Sbjct: 241 LTTAKGKLTVEREGKRGEVGEISPLLEFEQDPVQILDGMMALYLNSQILRCLQESMASEV 300

Query: 301 AARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEALEGF 351
           AARMNAMSNASENAMELKKSVS+AYNRERQAKITGEILEIVAG EAL+GF
Sbjct: 301 AARMNAMSNASENAMELKKSVSVAYNRERQAKITGEILEIVAGAEALQGF 348

[Close]

BLAST of Lsi05G005960 vs. NCBI nr
Match: KAA0033973.1 (ATP synthase gamma chain [Cucumis melo var. makuwa] >TYK02573.1 ATP synthase gamma chain [Cucumis melo var. makuwa])

HSP 1 Score: 617.1 bits (1590), Expect = 9.5e-173
Identity = 325/350 (92.86%), Postives = 335/350 (95.71%), Query Frame = 0


Query: 1   MTHFLEPKFHQTSFTPLRRIPKSPPPISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAA 60
           M H LEPKFHQT    LRRIPKSP PISIRCGGATRELRSRLDSIKNTQKLTEAMKL+AA
Sbjct: 1   MIHSLEPKFHQTPLPLLRRIPKSPHPISIRCGGATRELRSRLDSIKNTQKLTEAMKLVAA 60

Query: 61  AKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGL 120
           AKVRRAQEAVINSRPFSQSLAQFLHFITQQIQR+DIDFPFLNPRPVRKVAVVVFTGDRGL
Sbjct: 61  AKVRRAQEAVINSRPFSQSLAQFLHFITQQIQREDIDFPFLNPRPVRKVAVVVFTGDRGL 120

Query: 121 CGGFNASVIKKAETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVP 180
           CGGFNASV+KKAETRLAELKNL+LGHTLISVGKKGN +FRRRSD+EVDRFITGC GVS+P
Sbjct: 121 CGGFNASVLKKAETRLAELKNLNLGHTLISVGKKGNPYFRRRSDIEVDRFITGCSGVSLP 180

Query: 181 TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGEAMGDGGFR 240
           TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIE LLPLLGEGEAMGDGGFR
Sbjct: 181 TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIETLLPLLGEGEAMGDGGFR 240

Query: 241 LTTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV 300
           LTTAEGKL VEREGK G+LGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV
Sbjct: 241 LTTAEGKLTVEREGKGGELGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV 300

Query: 301 AARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEALEGF 351
           AARMNAMSNASENAMELKKSV+ AYNRERQAKITGEILEIVAG EAL+ F
Sbjct: 301 AARMNAMSNASENAMELKKSVTSAYNRERQAKITGEILEIVAGAEALKEF 350

[Close]

BLAST of Lsi05G005960 vs. NCBI nr
Match: XP_004152929.1 (ATP synthase gamma chain 1, chloroplastic [Cucumis sativus] >KGN56127.1 hypothetical protein Csa_011648 [Cucumis sativus])

HSP 1 Score: 613.2 bits (1580), Expect = 1.4e-171
Identity = 321/350 (91.71%), Postives = 336/350 (96.00%), Query Frame = 0


Query: 1   MTHFLEPKFHQTSFTPLRRIPKSPPPISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAA 60
           M H LEPKFHQT F+ LRRIPKSP PISIRCGG TRELRSRLDSIKNTQKLTEAMKL+AA
Sbjct: 1   MIHSLEPKFHQTPFSLLRRIPKSPHPISIRCGGTTRELRSRLDSIKNTQKLTEAMKLVAA 60

Query: 61  AKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGL 120
           AKVRRAQEAVINSRPFSQSLAQFLHF+TQQIQR+DIDFPFLNPRPV KVAVVVFTGDRGL
Sbjct: 61  AKVRRAQEAVINSRPFSQSLAQFLHFLTQQIQREDIDFPFLNPRPVGKVAVVVFTGDRGL 120

Query: 121 CGGFNASVIKKAETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVP 180
           CGGFNASVIKKAE RLAELKNL++GHT+IS+GKKGNS+FRRRSD+EVDRFITG GGVS+P
Sbjct: 121 CGGFNASVIKKAEARLAELKNLNMGHTVISIGKKGNSYFRRRSDIEVDRFITGGGGVSLP 180

Query: 181 TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGEAMGDGGFR 240
           TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPV+E LLPLLGEGEAMGDGGFR
Sbjct: 181 TAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVVETLLPLLGEGEAMGDGGFR 240

Query: 241 LTTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV 300
           LTTAEGKL VEREGK G+LGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV
Sbjct: 241 LTTAEGKLTVEREGKGGELGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEV 300

Query: 301 AARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEALEGF 351
           AARMNAMSNASENAMELKKSV+IAYNRERQAKITGEILEIVAG EAL+ F
Sbjct: 301 AARMNAMSNASENAMELKKSVTIAYNRERQAKITGEILEIVAGAEALKEF 350

[Close]

BLAST of Lsi05G005960 vs. NCBI nr
Match: XP_023520425.1 (ATP synthase gamma chain 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 588.2 bits (1515), Expect = 4.7e-164
Identity = 310/354 (87.57%), Postives = 328/354 (92.66%), Query Frame = 0


Query: 1   MTHFLEPKFHQTSFTP-LRRIPKSPPPISIRC---GGATRELRSRLDSIKNTQKLTEAMK 60
           MTHFLEP+FHQT F P LRRIPKSPPPISI+C   GG  R+L+SRLDSI NTQKLTEAMK
Sbjct: 1   MTHFLEPRFHQTPFPPLLRRIPKSPPPISIQCRGGGGGARDLQSRLDSINNTQKLTEAMK 60

Query: 61  LIAAAKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTG 120
           L+AAAKVRRAQEAVINSRPF+QSLAQFLHFITQQIQ  +IDFPFLNP PV KVA+VVFTG
Sbjct: 61  LVAAAKVRRAQEAVINSRPFAQSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTG 120

Query: 121 DRGLCGGFNASVIKKAETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGG 180
           DRGLCGGFNASVIKKA+TRLAELKNLDLGH LISVGKKGNSHFRRRSDV+VD++ITGCGG
Sbjct: 121 DRGLCGGFNASVIKKADTRLAELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGG 180

Query: 181 VSVPTAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGEAMGD 240
            SVPTAKEAQ IADIVFSLFISEEVDKVE+IYTKFVSLLK EPVIE LLPLLG+GEAMGD
Sbjct: 181 GSVPTAKEAQTIADIVFSLFISEEVDKVELIYTKFVSLLKCEPVIETLLPLLGDGEAMGD 240

Query: 241 GGFRLTTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESM 300
           GGFRLTT EGKLKVEREGKRG L EI  LLEFEQDPVQILDGM+ALYLNSQILRALQESM
Sbjct: 241 GGFRLTTKEGKLKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESM 300

Query: 301 ASEVAARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEALEGF 351
           ASEVAARMNAMSNASENA+ELK SV +AYNRERQAKITGEILEIVAG EAL+GF
Sbjct: 301 ASEVAARMNAMSNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQGF 354

[Close]

BLAST of Lsi05G005960 vs. NCBI nr
Match: KAG6577423.1 (ATP synthase gamma chain 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 586.6 bits (1511), Expect = 1.4e-163
Identity = 310/352 (88.07%), Postives = 326/352 (92.61%), Query Frame = 0


Query: 1   MTHFLEPKFHQTSFTP-LRRIPKSPPPISIRC-GGATRELRSRLDSIKNTQKLTEAMKLI 60
           MTHFLEP+FHQT F P LRRIPKSPPPISIRC GG  R+L+SRLDSI NTQKLTEAMKL+
Sbjct: 1   MTHFLEPRFHQTPFPPLLRRIPKSPPPISIRCRGGGARDLQSRLDSINNTQKLTEAMKLV 60

Query: 61  AAAKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDR 120
           AAAKVRRAQEAVINSRPF+QSLAQFLHFITQQIQ   IDFPFLNP PV KVA+VVFTGDR
Sbjct: 61  AAAKVRRAQEAVINSRPFAQSLAQFLHFITQQIQPHQIDFPFLNPAPVGKVALVVFTGDR 120

Query: 121 GLCGGFNASVIKKAETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVS 180
           GLCGGFNASVIKKA+TRLAELKNLDLGH LISVGKKGNSHFRRRSDV+VD++ITGCGG S
Sbjct: 121 GLCGGFNASVIKKADTRLAELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGS 180

Query: 181 VPTAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGEAMGDGG 240
           VPTAKEAQ IADIVFSLFISEEVDKVE+IYTKFVSLLK EPVIE LLPLLG+GEAM DGG
Sbjct: 181 VPTAKEAQTIADIVFSLFISEEVDKVELIYTKFVSLLKCEPVIETLLPLLGDGEAMRDGG 240

Query: 241 FRLTTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMAS 300
           FRLTT EGKLKVEREGKRG L EI  LLEFEQDPVQILDGM+ALYLNSQILRALQESMAS
Sbjct: 241 FRLTTKEGKLKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMAS 300

Query: 301 EVAARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEALEGF 351
           EVAARMNAMSNASENA+ELK SV +AYNRERQAKITGEILEIVAG EAL+GF
Sbjct: 301 EVAARMNAMSNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQGF 352

[Close]

BLAST of Lsi05G005960 vs. TAIR 10
Match: AT4G04640.1 (ATPase, F1 complex, gamma subunit protein )

HSP 1 Score: 394.4 bits (1012), Expect = 9.3e-110
Identity = 220/345 (63.77%), Postives = 265/345 (76.81%), Query Frame = 0


Query: 12  TSFTPLRRIPKSPPPISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAAAKVRRAQEAVI 71
           TS  P R    SP   S+      RELR R+DS+KNTQK+TEAMKL+AAAKVRRAQEAV+
Sbjct: 36  TSSPPSRASSVSPLQASL------RELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVV 95

Query: 72  NSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGLCGGFNASVIKK 131
           N RPFS++L + L+ I +Q+Q DD+D P    RPV+KVA+VV TGDRGLCGGFN  +IKK
Sbjct: 96  NGRPFSETLVEVLYNINEQLQTDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKK 155

Query: 132 AETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVPTAKEAQAIADI 191
           AE R+ ELK L L +T+ISVGKKGNS+F RR  + VD+++      ++PTAKEAQA+AD 
Sbjct: 156 AEARIKELKGLGLEYTVISVGKKGNSYFLRRPYIPVDKYLE---AGTLPTAKEAQAVADD 215

Query: 192 VFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGE----------AMGDGGFRL 251
           VFSLFISEEVDKVE++YTKFVSL+KSEPVI  LLPL  +GE          A  D  FRL
Sbjct: 216 VFSLFISEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGTCVDAAEDEFFRL 275

Query: 252 TTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEVA 311
           TT EGKL VERE  R    + SP+L+FEQDPVQILD ++ LYLNSQILRALQES+ASE+A
Sbjct: 276 TTKEGKLTVERETFRTPTADFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELA 335

Query: 312 ARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEA 347
           ARM+AMS+AS+NA +LKKS+S+ YNR+RQAKITGEILEIVAG  A
Sbjct: 336 ARMSAMSSASDNASDLKKSLSMVYNRKRQAKITGEILEIVAGANA 371

[Close]

BLAST of Lsi05G005960 vs. TAIR 10
Match: AT1G15700.1 (ATPase, F1 complex, gamma subunit protein )

HSP 1 Score: 384.8 bits (987), Expect = 7.4e-107
Identity = 217/346 (62.72%), Postives = 267/346 (77.17%), Query Frame = 0


Query: 13  SFTPLRRIPKSP-PPISIRCGGATRELRSRLDSIKNTQKLTEAMKLIAAAKVRRAQEAVI 72
           S TP R   +SP P I IR G   RELR R+DS+KNTQK+TEAM+L+AAA+VRRAQ+AVI
Sbjct: 42  SLTPNRISSRSPLPSIQIRAG--IRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVI 101

Query: 73  NSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPVRKVAVVVFTGDRGLCGGFNASVIKK 132
             RPF+++L + L+ I Q  Q +DIDFP    RPV++VA+VV TGD+GLCGGFN +V KK
Sbjct: 102 KGRPFTETLVEILYSINQSAQLEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKK 161

Query: 133 AETRLAELKNLDLGHTLISVGKKGNSHFRRRSDVEVDRFITGCGGVSVPTAKEAQAIADI 192
           A  R+ ELK   +   +ISVGKKGN++F RR + +VD+ I G GGV  PT KEAQ IAD 
Sbjct: 162 ATLRVQELKQRGIDCVVISVGKKGNAYFSRRDEFDVDKCIEG-GGV-FPTTKEAQVIADD 221

Query: 193 VFSLFISEEVDKVEVIYTKFVSLLKSEPVIEALLPLLGEGE----------AMGDGGFRL 252
           VFSLF+SEEVDKVE++YTKFVSL+KS+PVI  LLPL  +GE          A+ D  FRL
Sbjct: 222 VFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGESCDVKGECVDAIEDEMFRL 281

Query: 253 TTAEGKLKVEREGKRGKLGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMASEVA 312
           T+ +GKL VER     +  EISPL++FEQDPVQILD MM LYLNSQILRALQES+ASE+A
Sbjct: 282 TSKDGKLAVERTKLEVEKPEISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELA 341

Query: 313 ARMNAMSNASENAMELKKSVSIAYNRERQAKITGEILEIVAGTEAL 348
           +RMNAMSNA++NA+ELKK++++AYNR RQAKITGE+LEIVAG EAL
Sbjct: 342 SRMNAMSNATDNAVELKKNLTMAYNRARQAKITGELLEIVAGAEAL 383

[Close]

BLAST of Lsi05G005960 vs. TAIR 10
Match: AT2G33040.1 (gamma subunit of Mt ATP synthase )

HSP 1 Score: 115.9 bits (289), Expect = 6.4e-26
Identity = 93/317 (29.34%), Postives = 158/317 (49.84%), Query Frame = 0


Query: 34  ATRELRSRLDSIKNTQKLTEAMKLIAAAKVRRAQEAVINSRPFSQSLAQFLHFITQQIQR 93
           +T+ +R+R+ S+KN QK+T+AMK++AA+K+R  Q    NSR   Q     L         
Sbjct: 44  STQVVRNRMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQPFTALLG-------- 103

Query: 94  DDIDFPFLNPRPVRKVAVVVFTGDRGLCGGFNASVIKKAETRLAELKNLDLGHTLISVGK 153
              D P ++   V+K  VV  + D+GLCGG N++V+K +          +     + VG+
Sbjct: 104 ---DNPSID---VKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGE 163

Query: 154 KGNSHFRRRSDVEVDRFITGCGGVSVPTAKEAQAIADIVFSLFISEEVDKVEVIYTKFVS 213
           K  +   R S  ++   +T      +  A+ +    DI+ ++    E D + ++Y KF S
Sbjct: 164 KAKAIMFRDSKNDIVLSVTELNKNPLNYAQVSVLADDILKNV----EFDALRIVYNKFHS 223

Query: 214 LLKSEPVIEALLPLLGEGEAMGDGGFRLTTAEGKLKVEREGK-RGKLGEI-SPLLEFEQD 273
           ++   P +  +L                        +E+E +  GKLGE+ S  +E  + 
Sbjct: 224 VVAFLPTVSTVL--------------------SPEIIEKESEIGGKLGELDSYEIEGGET 283

Query: 274 PVQILDGMMALYLNSQILRALQESMASEVAARMNAMSNASENAMELKKSVSIAYNRERQA 333
             +IL  +     +  +  A+ E+  SE+ ARM+AM ++S NA E+   +++ YNR RQA
Sbjct: 284 KGEILQNLAEFQFSCVMFNAVLENACSEMGARMSAMDSSSRNAGEMLDRLTLTYNRTRQA 322

Query: 334 KITGEILEIVAGTEALE 349
            IT E++EI++G  ALE
Sbjct: 344 SITTELIEIISGASALE 322

The following BLAST results are available for this feature:

BLAST of Lsi05G005960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q01908	1.3e-108	63.77	ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATP...	[more]
P29790	1.5e-107	64.44	ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPC PE=...	[more]
Q01909	1.0e-105	62.72	ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATP...	[more]
P0C1M0	2.3e-105	60.06	ATP synthase subunit gamma, chloroplastic OS=Zea mays OX=4577 PE=1 SV=1	[more]
P28552	2.3e-105	63.41	ATP synthase gamma chain, chloroplastic OS=Pisum sativum OX=3888 GN=ATPC PE=2 SV...	[more]

BLAST of Lsi05G005960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BSB8	4.6e-173	92.86	ATP synthase gamma chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0L6B0	6.6e-172	91.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077620 PE=3 SV=1	[more]
A0A6J1F0S3	1.6e-162	87.22	ATP synthase gamma chain 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JD36	1.5e-160	86.93	ATP synthase gamma chain 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A7J7H7E1	2.6e-115	69.44	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_014839 PE=3 SV=1	[more]

BLAST of Lsi05G005960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905281.1	3.3e-173	92.57	ATP synthase gamma chain 1, chloroplastic-like [Benincasa hispida]	[more]
KAA0033973.1	9.5e-173	92.86	ATP synthase gamma chain [Cucumis melo var. makuwa] >TYK02573.1 ATP synthase gam...	[more]
XP_004152929.1	1.4e-171	91.71	ATP synthase gamma chain 1, chloroplastic [Cucumis sativus] >KGN56127.1 hypothet...	[more]
XP_023520425.1	4.7e-164	87.57	ATP synthase gamma chain 1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
KAG6577423.1	1.4e-163	88.07	ATP synthase gamma chain 1, chloroplastic, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Lsi05G005960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04640.1	9.3e-110	63.77	ATPase, F1 complex, gamma subunit protein	[more]
AT1G15700.1	7.4e-107	62.72	ATPase, F1 complex, gamma subunit protein	[more]
AT2G33040.1	6.4e-26	29.34	gamma subunit of Mt ATP synthase	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000131	ATP synthase, F1 complex, gamma subunit	PRINTS	PR00126	ATPASEGAMMA	coord: 325..346 score: 65.0 coord: 294..313 score: 60.1 coord: 106..125 score: 55.0 coord: 202..219 score: 40.44
IPR000131	ATP synthase, F1 complex, gamma subunit	PFAM	PF00231	ATP-synt	coord: 35..347 e-value: 3.8E-83 score: 279.4
IPR000131	ATP synthase, F1 complex, gamma subunit	TIGRFAM	TIGR01146	TIGR01146	coord: 35..347 e-value: 2.1E-96 score: 321.0
IPR000131	ATP synthase, F1 complex, gamma subunit	PANTHER	PTHR11693	ATP SYNTHASE GAMMA CHAIN	coord: 8..348
IPR000131	ATP synthase, F1 complex, gamma subunit	HAMAP	MF_00815	ATP_synth_gamma_bact	coord: 32..347 score: 29.757551
IPR000131	ATP synthase, F1 complex, gamma subunit	CDD	cd12151	F1-ATPase_gamma	coord: 35..343 e-value: 9.10598E-102 score: 299.493
None	No IPR available	GENE3D	1.10.287.80	ATP synthase, gamma subunit, helix hairpin domain	coord: 245..347 e-value: 1.2E-25 score: 92.5 coord: 33..99 e-value: 1.8E-13 score: 53.1
None	No IPR available	GENE3D	3.40.1380.10		coord: 100..228 e-value: 6.3E-34 score: 118.9
None	No IPR available	PANTHER	PTHR11693:SF33	ATP SYNTHASE GAMMA CHAIN, CHLOROPLASTIC-LIKE	coord: 8..348
IPR035968	ATP synthase, F1 complex, gamma subunit superfamily	SUPERFAMILY	52943	ATP synthase (F1-ATPase), gamma subunit	coord: 35..347

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G005960.1	Lsi05G005960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism