Lsi05G005590 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G005590
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr05: 6943407 .. 6944915 (+)
RNA-Seq ExpressionLsi05G005590
SyntenyLsi05G005590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATTCCTTGTCTTTTTCGAAATCTACGTAATTTCTCCAGCCCTTACTTCTACTCGATTTACTCATTTGCTTCTCATTCTCCATTTCCTTCATCCTCGCCTTCCAAACATTGGTACCGTTTTCTTCGATTGTATACTACACCAGCATCCGATTCTGCTGCTGGTTCTTCCTTAATCTGCAATTCAACTTCTCAATCTGTGCCTTCATTGTGTTTGTTTGAGAGATGCAATGGTGGAACATTGGATTTGAATCTTGGATTGTTTCGACACCGCTACAGAAGCTGCCGTTCATTTTCCTCTTCTTCGTATGAGAAGCCCCAGTGTGGGACTGGTAATTTAAATGTGTTTAAACCGAATGCCACCTCCAATCAATTTTGGGATATTATAAATATCATTCGGGGAAATCGGGAAGATTTGGAGTCCAAGTTGGATACGTTGAATGTAAGTTTAACTAATGCTTTAGTTGTTCAGATTTTTCGGGTGCTGAATAATTATAAGATTTCTGCCTTTCGTTTTTTCAACTGGGTTAGAGTTCAATCATGTAAATTTCCTTGTAACTCTGATGTTTATAGTCTACTTATTGATAATTTTGGTAGATTAGATGATTATGAGGGGATTCTTCCTGTTCTGATTGAGTTCAGGCGGAAAGGAATTGATCTAAACCACAAAGCATTTGGGTTTTTACTTGTTCAACTATCAGATGAAGATTCAATTAAGATTTCTGTTGAAAGACTGGTGAAGTTGTTGAATGAAGTAGGAGGATCTTGTAGAATATCTGGGGTCATGGCATTGATTGAGATGTTCTGTTCTCTTGGTTCTTTTGGAATGGCCAAGTTTGTAATTGAGATAACTGAGAGAAGAGCATCTTTCTACAACATCATTGTTCGGGAACAATGTCGACGAAACGATTTCGAAGGAGCTAGATGTACACTTGATGAGATGAGGCAACATGGTTGTAGCCCAGATGTGGGGATTCTCAATTATCTGCTCAGTAGTTTATGCAAGAATGACAAATTTGGTGAAGCTCATAACTTGTTTGAAGAAATGCTCGAAAGAGATTGTCCTCCAAACTCCTTGACATTTGAAGTCATTATCTGCCATCTCTGTGAAATTGGTAATATTGAATCAGCACTCAGCTTTCTTGACATGATGGTGTCAAGGGGTCTTGAGCCTCGCCTTTCGACACACGCTGCCTTCGTGAAAAGCTACTTCAATTCACGGAGATATGAGGAAGCGTATCGGTATGCGGTTGATTCTAGCTTGAAACATGCCATGGCAAAGAATGCAACATATAGCTTGCTTGCAACTCTTCATGAGAAGAGAGGAAACTTAGTTGATGCTCAAAAAATTCTTTCTGAGTTGATAGATGCAGGTCTTAGACCAAACTTTCCCGTGTATATGAGAGTTCTGAAGAAGCTTCAGCTTCAAGGCAAGGAAGATTTGGCCAATGATTTGAAGGGAAAACTCTCCAATGTAAGTTTGCATAGTGGCATTCAAACTGGATAA

mRNA sequence

ATGGAGATTCCTTGTCTTTTTCGAAATCTACGTAATTTCTCCAGCCCTTACTTCTACTCGATTTACTCATTTGCTTCTCATTCTCCATTTCCTTCATCCTCGCCTTCCAAACATTGGTACCGTTTTCTTCGATTGTATACTACACCAGCATCCGATTCTGCTGCTGGTTCTTCCTTAATCTGCAATTCAACTTCTCAATCTGTGCCTTCATTGTGTTTGTTTGAGAGATGCAATGGTGGAACATTGGATTTGAATCTTGGATTGTTTCGACACCGCTACAGAAGCTGCCGTTCATTTTCCTCTTCTTCGTATGAGAAGCCCCAGTGTGGGACTGGTAATTTAAATGTGTTTAAACCGAATGCCACCTCCAATCAATTTTGGGATATTATAAATATCATTCGGGGAAATCGGGAAGATTTGGAGTCCAAGTTGGATACGTTGAATGTAAGTTTAACTAATGCTTTAGTTGTTCAGATTTTTCGGGTGCTGAATAATTATAAGATTTCTGCCTTTCGTTTTTTCAACTGGGTTAGAGTTCAATCATGTAAATTTCCTTGTAACTCTGATGTTTATAGTCTACTTATTGATAATTTTGGTAGATTAGATGATTATGAGGGGATTCTTCCTGTTCTGATTGAGTTCAGGCGGAAAGGAATTGATCTAAACCACAAAGCATTTGGGTTTTTACTTGTTCAACTATCAGATGAAGATTCAATTAAGATTTCTGTTGAAAGACTGGTGAAGTTGTTGAATGAAGTAGGAGGATCTTGTAGAATATCTGGGGTCATGGCATTGATTGAGATGTTCTGTTCTCTTGGTTCTTTTGGAATGGCCAAGTTTGTAATTGAGATAACTGAGAGAAGAGCATCTTTCTACAACATCATTGTTCGGGAACAATGTCGACGAAACGATTTCGAAGGAGCTAGATGTACACTTGATGAGATGAGGCAACATGGTTGTAGCCCAGATGTGGGGATTCTCAATTATCTGCTCAGTAGTTTATGCAAGAATGACAAATTTGGTGAAGCTCATAACTTGTTTGAAGAAATGCTCGAAAGAGATTGTCCTCCAAACTCCTTGACATTTGAAGTCATTATCTGCCATCTCTGTGAAATTGGTAATATTGAATCAGCACTCAGCTTTCTTGACATGATGGTGTCAAGGGGTCTTGAGCCTCGCCTTTCGACACACGCTGCCTTCGTGAAAAGCTACTTCAATTCACGGAGATATGAGGAAGCGTATCGGTATGCGGTTGATTCTAGCTTGAAACATGCCATGGCAAAGAATGCAACATATAGCTTGCTTGCAACTCTTCATGAGAAGAGAGGAAACTTAGTTGATGCTCAAAAAATTCTTTCTGAGTTGATAGATGCAGGTCTTAGACCAAACTTTCCCGTGTATATGAGAGTTCTGAAGAAGCTTCAGCTTCAAGGCAAGGAAGATTTGGCCAATGATTTGAAGGGAAAACTCTCCAATGTAAGTTTGCATAGTGGCATTCAAACTGGATAA

Coding sequence (CDS)

ATGGAGATTCCTTGTCTTTTTCGAAATCTACGTAATTTCTCCAGCCCTTACTTCTACTCGATTTACTCATTTGCTTCTCATTCTCCATTTCCTTCATCCTCGCCTTCCAAACATTGGTACCGTTTTCTTCGATTGTATACTACACCAGCATCCGATTCTGCTGCTGGTTCTTCCTTAATCTGCAATTCAACTTCTCAATCTGTGCCTTCATTGTGTTTGTTTGAGAGATGCAATGGTGGAACATTGGATTTGAATCTTGGATTGTTTCGACACCGCTACAGAAGCTGCCGTTCATTTTCCTCTTCTTCGTATGAGAAGCCCCAGTGTGGGACTGGTAATTTAAATGTGTTTAAACCGAATGCCACCTCCAATCAATTTTGGGATATTATAAATATCATTCGGGGAAATCGGGAAGATTTGGAGTCCAAGTTGGATACGTTGAATGTAAGTTTAACTAATGCTTTAGTTGTTCAGATTTTTCGGGTGCTGAATAATTATAAGATTTCTGCCTTTCGTTTTTTCAACTGGGTTAGAGTTCAATCATGTAAATTTCCTTGTAACTCTGATGTTTATAGTCTACTTATTGATAATTTTGGTAGATTAGATGATTATGAGGGGATTCTTCCTGTTCTGATTGAGTTCAGGCGGAAAGGAATTGATCTAAACCACAAAGCATTTGGGTTTTTACTTGTTCAACTATCAGATGAAGATTCAATTAAGATTTCTGTTGAAAGACTGGTGAAGTTGTTGAATGAAGTAGGAGGATCTTGTAGAATATCTGGGGTCATGGCATTGATTGAGATGTTCTGTTCTCTTGGTTCTTTTGGAATGGCCAAGTTTGTAATTGAGATAACTGAGAGAAGAGCATCTTTCTACAACATCATTGTTCGGGAACAATGTCGACGAAACGATTTCGAAGGAGCTAGATGTACACTTGATGAGATGAGGCAACATGGTTGTAGCCCAGATGTGGGGATTCTCAATTATCTGCTCAGTAGTTTATGCAAGAATGACAAATTTGGTGAAGCTCATAACTTGTTTGAAGAAATGCTCGAAAGAGATTGTCCTCCAAACTCCTTGACATTTGAAGTCATTATCTGCCATCTCTGTGAAATTGGTAATATTGAATCAGCACTCAGCTTTCTTGACATGATGGTGTCAAGGGGTCTTGAGCCTCGCCTTTCGACACACGCTGCCTTCGTGAAAAGCTACTTCAATTCACGGAGATATGAGGAAGCGTATCGGTATGCGGTTGATTCTAGCTTGAAACATGCCATGGCAAAGAATGCAACATATAGCTTGCTTGCAACTCTTCATGAGAAGAGAGGAAACTTAGTTGATGCTCAAAAAATTCTTTCTGAGTTGATAGATGCAGGTCTTAGACCAAACTTTCCCGTGTATATGAGAGTTCTGAAGAAGCTTCAGCTTCAAGGCAAGGAAGATTTGGCCAATGATTTGAAGGGAAAACTCTCCAATGTAAGTTTGCATAGTGGCATTCAAACTGGATAA

Protein sequence

MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLICNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSCRSFSSSSYEKPQCGTGNLNVFKPNATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRVQSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSIKISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQCRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNSLTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVDSSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGKEDLANDLKGKLSNVSLHSGIQTG
Homology
BLAST of Lsi05G005590 vs. ExPASy Swiss-Prot
Match: Q9SSR6 (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g52640 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 5.4e-23
Identity = 100/394 (25.38%), Postives = 165/394 (41.88%), Query Frame = 0

Query: 124 NQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRVQSCK 183
           N+   +++  R  ++DLE  L   +  +++ LV Q+ +   N    A RFF W R +   
Sbjct: 39  NEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWAR-RIPD 98

Query: 184 FPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKG-IDLNHKAFGFLLVQLSD------- 243
           F  + + Y +L++  G    +  +   LIE R     +++ K F  +    S        
Sbjct: 99  FAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEA 158

Query: 244 --------EDSIKISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITER 303
                   E  IK  V+ L +LL+ +   C    V    E F     FG+          
Sbjct: 159 CRAFNRMVEFGIKPCVDDLDQLLHSL---CDKKHVNHAQEFFGKAKGFGIVP-------- 218

Query: 304 RASFYNIIVREQCRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLF 363
            A  Y+I+VR   R  D  GAR   DEM +  C  D+   N LL +LCK+      + +F
Sbjct: 219 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 278

Query: 364 EEMLERDCPPNSLTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNS 423
           +EM      P++ +F + I   C+ G++ SA   LD M    L P + T    +K+   +
Sbjct: 279 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 338

Query: 424 RRYEEAYRYAVDSSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVY 483
            + ++AY    +   K A     TY+ +   H     +  A K+LS +      P+   Y
Sbjct: 339 EKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTY 398

Query: 484 MRVLKKLQLQGKEDLANDLKGKLSNVSLHSGIQT 502
             VLK L   G+ D A ++   +S    +  + T
Sbjct: 399 NMVLKLLIRIGRFDRATEIWEGMSERKFYPTVAT 420

BLAST of Lsi05G005590 vs. ExPASy Swiss-Prot
Match: O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-22
Identity = 84/319 (26.33%), Postives = 145/319 (45.45%), Query Frame = 0

Query: 187 NSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSIKISVERL 246
           N   +++LID F + D+  G + V  E   + +  N  ++  L+  L +   I  ++   
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMR 354

Query: 247 VKLLNEVGGSCRISGVMALIEMFC-------SLGSFGMAKFVIEITERRASFYNIIVREQ 306
            K+++  G    +    ALI  FC       +L  FG  K    +   R   YN+++   
Sbjct: 355 DKMVS-AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR--MYNMLIDAY 414

Query: 307 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 366
           C+    +      +EM + G  PDVG  N L++ LC+N     A  LF+++  +   P+ 
Sbjct: 415 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDL 474

Query: 367 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 426
           +TF +++   C  G    A   L  M   GL+PR  T+   +K Y      + A      
Sbjct: 475 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 534

Query: 427 SSLKHAMAKN-ATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQG 486
              +  +  N A+Y++L   + ++G L DA  +L+E+++ GL PN   Y  V +++  QG
Sbjct: 535 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 594

Query: 487 KEDLANDLKGKLSNVSLHS 498
                 D++G L NVS  S
Sbjct: 595 ---FVPDIEGHLFNVSTKS 606

BLAST of Lsi05G005590 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-19
Identity = 67/244 (27.46%), Postives = 114/244 (46.72%), Query Frame = 0

Query: 245 RLVKLLNEVGGSCRISGVM---ALIEMFCSLGSFGMAKFVIE--ITERRASFYNIIVREQ 304
           +  K+L  + GS  +  V+    +I  +C  G    A  V++          YN I+R  
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSL 214

Query: 305 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 364
           C     + A   LD M Q  C PDV     L+ + C++   G A  L +EM +R C P+ 
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274

Query: 365 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 424
           +T+ V++  +C+ G ++ A+ FL+ M S G +P + TH   ++S  ++ R+ +A +   D
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334

Query: 425 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 484
              K       T+++L     ++G L  A  IL ++   G +PN   Y  +L     + K
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394

BLAST of Lsi05G005590 vs. ExPASy Swiss-Prot
Match: Q9FLJ4 (Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana OX=3702 GN=At5g61400 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.6e-19
Identity = 60/233 (25.75%), Postives = 108/233 (46.35%), Query Frame = 0

Query: 253 VGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQCRRNDFEGARCTL 312
           V G C+   ++    +F  +  FG+        +     YN ++   C+  +   A   L
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGV--------DPNLYVYNCLIHGHCKSGNMLEAVGLL 370

Query: 313 DEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNSLTFEVIICHLCEI 372
            EM     SPDV     L++ LC  D+  EA+ LF++M      P+S T+  +I   C+ 
Sbjct: 371 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 430

Query: 373 GNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVDSSLKHAMAKNATY 432
            N+E AL     M + G+EP + T +  +  Y N R  + A     + ++K  +    TY
Sbjct: 431 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 490

Query: 433 SLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGKEDLAND 486
           + L   H K  N+ +A ++ S++++AG+ PN   +  ++     +G+  +A D
Sbjct: 491 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535

BLAST of Lsi05G005590 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.1e-19
Identity = 73/308 (23.70%), Postives = 138/308 (44.81%), Query Frame = 0

Query: 187 NSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSIKISVERL 246
           N   Y+ LI+ + +    E  + V+     + +  N + +  L+     +   K +V + 
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI-----KGYCKSNVHKA 451

Query: 247 VKLLNEVGGSCRISGVM---ALIEMFCSLGSFGMAKFVIEITERRASF-----YNIIVRE 306
           + +LN++     +  V+   +LI+  C  G+F  A  ++ +   R        Y  ++  
Sbjct: 452 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 511

Query: 307 QCRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPN 366
            C+    E A    D + Q G +P+V +   L+   CK  K  EAH + E+ML ++C PN
Sbjct: 512 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 571

Query: 367 SLTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAV 426
           SLTF  +I  LC  G ++ A    + MV  GL+P +ST    +        ++ AY    
Sbjct: 572 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 631

Query: 427 DSSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQG 486
                       TY+     + + G L+DA+ +++++ + G+ P+   Y  ++K     G
Sbjct: 632 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 691

BLAST of Lsi05G005590 vs. ExPASy TrEMBL
Match: A0A6J1F148 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111438608 PE=4 SV=1)

HSP 1 Score: 879.4 bits (2271), Expect = 7.1e-252
Identity = 441/503 (87.67%), Postives = 461/503 (91.65%), Query Frame = 0

Query: 1   MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
           M I  L RNLR+FS PYFYSIYSFA HSPFPSSSPSKH+ RF+R YT P SDSAA S L+
Sbjct: 1   MGITSLSRNLRDFSHPYFYSIYSFAPHSPFPSSSPSKHFGRFIRFYTAPTSDSAARSPLL 60

Query: 61  CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSC-RSFSSSSYEKPQCGTGNLNVFKP 120
           CNSTSQSVPSLCLFERCNG T DLNLGLFR  YRSC RSFSS S+EKPQ GTG LNVFKP
Sbjct: 61  CNSTSQSVPSLCLFERCNGVTKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKP 120

Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
           N TSNQFWDIINIIR N+EDLESKLD+LNVS TNALV QIFRVLNN+K+SAFRFFNWVRV
Sbjct: 121 NVTSNQFWDIINIIRANQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRV 180

Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
           QSCKFPCNSD+YSLLIDNFGRLDDYEGILPVL EFR+KG+ LNHKAF FL V LSDEDSI
Sbjct: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSI 240

Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
           KI VERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERR SFYNIIVREQ
Sbjct: 241 KICVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRTSFYNIIVREQ 300

Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
           CRRNDFEGARCTLDEMRQ GCSPDVGILNYLLSSLCKNDK  EA NLFEEMLERDCPPNS
Sbjct: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKLSEAQNLFEEMLERDCPPNS 360

Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
           LTFEVIICHLCEIGNIESAL+FLDMMVSRGLEPRLSTHAAFVKSYFNS+RYEEAYRY +D
Sbjct: 361 LTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYRYTID 420

Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
           SSLKH MA+NATYSLLATLHEKRGNLVDAQK+L ELIDAGLRPNFPVYMRVLKKLQ+QG+
Sbjct: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGR 480

Query: 481 EDLANDLKGKLSNVSLHSGIQTG 503
           EDLANDLKGK SNVS+   IQTG
Sbjct: 481 EDLANDLKGKFSNVSMQRDIQTG 503

BLAST of Lsi05G005590 vs. ExPASy TrEMBL
Match: A0A6J1L3E8 (pentatricopeptide repeat-containing protein At1g09820-like OS=Cucurbita maxima OX=3661 GN=LOC111500167 PE=4 SV=1)

HSP 1 Score: 874.4 bits (2258), Expect = 2.3e-250
Identity = 438/503 (87.08%), Postives = 461/503 (91.65%), Query Frame = 0

Query: 1   MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
           M I  L RNLR+FS PYFYSIYSFA HSPFPSSSPSKH+ RF+R YT P SDSAA S L+
Sbjct: 1   MGITSLSRNLRDFSHPYFYSIYSFAPHSPFPSSSPSKHFGRFIRFYTAPTSDSAARSPLL 60

Query: 61  CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSC-RSFSSSSYEKPQCGTGNLNVFKP 120
           CNST QSVPSLCLFERCNG T DLNLGLFR  YRSC RSFSS S+EKPQ GTG LNVF P
Sbjct: 61  CNSTPQSVPSLCLFERCNGVTKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFNP 120

Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
           N TSNQFWDIINIIR N+E+LESKLD+LNVS TNALV QIFRVLNN+K+SAFRFFNWV+V
Sbjct: 121 NVTSNQFWDIINIIRANQENLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVKV 180

Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
           QSCKFPCNSD+YSLLIDNFGRLDDYEGI+PVL EFR+KG+ LNHKAF FL V LS++DSI
Sbjct: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGIIPVLNEFRQKGVGLNHKAFEFLHVNLSNDDSI 240

Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
           KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERR SFYNIIVREQ
Sbjct: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRTSFYNIIVREQ 300

Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
           CRRNDFEGARCTLDEMRQ GCSPDVGILNYLLSSLCKNDKF EAHNLFEEMLERDCPPNS
Sbjct: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAHNLFEEMLERDCPPNS 360

Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
           LTFEVIICHLCEIGNIESAL+FLD MVSRGLEPRLSTHAAFVKSYFNS+RYEEAYRY VD
Sbjct: 361 LTFEVIICHLCEIGNIESALNFLDTMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYRYTVD 420

Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
           SSLKH MA+NATYSLLATLHEKRGNLVDAQKIL ELIDAGLRPNFPVYMRVLKKLQ+QG+
Sbjct: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKILCELIDAGLRPNFPVYMRVLKKLQVQGR 480

Query: 481 EDLANDLKGKLSNVSLHSGIQTG 503
           EDLANDLKGK SNVS+   IQTG
Sbjct: 481 EDLANDLKGKFSNVSMQRDIQTG 503

BLAST of Lsi05G005590 vs. ExPASy TrEMBL
Match: A0A6J1CJ38 (pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111012070 PE=4 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 1.7e-224
Identity = 414/529 (78.26%), Postives = 443/529 (83.74%), Query Frame = 0

Query: 1   MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKH--------------WYRFLRLY 60
           MEI  L R LRNFS+P  Y IYSF+S SP+PS S   H               + F   Y
Sbjct: 1   MEISGLPRKLRNFSNP--YCIYSFSSQSPYPSCSTFSHPRTLATPTDPSSIILFNFSPFY 60

Query: 61  TTPASDS------AAGSSLICNSTSQSVPSLCLFERCNGGTLDLNLGLFRHR-YRSCRSF 120
           +  ASDS      AAG SLICN+ S S PSLCLF RCNGG LDLNLGL + R Y +CRSF
Sbjct: 61  SISASDSAESPINAAGCSLICNAISHSAPSLCLFGRCNGGRLDLNLGLLQRRSYTTCRSF 120

Query: 121 SSSSY------EKPQCGTGNLNVFKPNATSNQFWDIINIIRGNREDLESKLDTLNVSLTN 180
            SSS+      EKPQCGTGNL+V KPNA  NQFWDII IIR N EDLESKL++LN+SLTN
Sbjct: 121 LSSSFNQPTSTEKPQCGTGNLDVSKPNARQNQFWDIIKIIRRNEEDLESKLNSLNLSLTN 180

Query: 181 ALVVQIFRVLNNYKISAFRFFNWVRVQSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIE 240
            LV QIFRVLNN K+SAFRFFNW+RVQSCKFP NSDVYSLLIDNFGRLDDYEG+LPVL E
Sbjct: 181 VLVAQIFRVLNNDKVSAFRFFNWIRVQSCKFPGNSDVYSLLIDNFGRLDDYEGMLPVLTE 240

Query: 241 FRRKGIDLNHKAFGFLLVQLSDEDSIKISVERLVKLLNEVGGSCRISGVMALIEMFCSLG 300
           FRRKGIDLNHKAF FL VQLS+E SIKISVER++KLLNEVGGSCRISGVM+LIEMFCS G
Sbjct: 241 FRRKGIDLNHKAFVFLHVQLSNEASIKISVERVIKLLNEVGGSCRISGVMSLIEMFCSFG 300

Query: 301 SFGMAKFVIEITERRASFYNIIVREQCRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSS 360
           S+GMAKFVIEITERRASFYNIIVREQCRRNDFEGARCTL+EMRQ GCSPDVGILNYLLS 
Sbjct: 301 SYGMAKFVIEITERRASFYNIIVREQCRRNDFEGARCTLNEMRQVGCSPDVGILNYLLSC 360

Query: 361 LCKNDKFGEAHNLFEEMLERDCPPNSLTFEVIICHLCEIGNIESALSFLDMMVSRGLEPR 420
           LCKND+F EA ++FE ML++DCPPNSLTFEVIICHLCEIG IESALSFLDMMVSRGLEPR
Sbjct: 361 LCKNDRFDEAQSMFEAMLQQDCPPNSLTFEVIICHLCEIGKIESALSFLDMMVSRGLEPR 420

Query: 421 LSTHAAFVKSYFNSRRYEEAYRYAVDSSLKHAMAKNATYSLLATLHEKRGNLVDAQKILS 480
           LSTHAAFVKSYFNS+RYEEAYRYAVDSS KHA A+NATYSLLATLHEKRGNLVDAQKILS
Sbjct: 421 LSTHAAFVKSYFNSQRYEEAYRYAVDSSSKHATAQNATYSLLATLHEKRGNLVDAQKILS 480

Query: 481 ELIDAGLRPNFPVYMRVLKKLQLQGKEDLANDLKGKLSNVSLHSGIQTG 503
           ELIDAGLRPNFPVY RV KKLQLQGKEDLANDLKGK S VS   GIQTG
Sbjct: 481 ELIDAGLRPNFPVYTRVFKKLQLQGKEDLANDLKGKFSIVSFQCGIQTG 527

BLAST of Lsi05G005590 vs. ExPASy TrEMBL
Match: A0A0A0L3E7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637180 PE=4 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 6.3e-224
Identity = 401/501 (80.04%), Postives = 439/501 (87.62%), Query Frame = 0

Query: 1   MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
           MEIPCL RNLRNFS+PYFYSIYSFA  SPF         YRF R YT  ASDSAAGSSLI
Sbjct: 1   MEIPCLSRNLRNFSNPYFYSIYSFAPRSPF-------LLYRFSRFYTILASDSAAGSSLI 60

Query: 61  CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSCRSFSSSSYEKPQCGTGNLNVFKPN 120
           CNSTSQSVPSLCLFERCNGGT DLNL LFRH YRSCR+FSS S EK QCGTGNLNV K N
Sbjct: 61  CNSTSQSVPSLCLFERCNGGTSDLNLALFRHHYRSCRAFSSFSLEKRQCGTGNLNVSKRN 120

Query: 121 ATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRVQ 180
            TSNQ  +IINIIR N+EDLESKLD+ NV LTN LV QI  +LN +KISA RFFNWV VQ
Sbjct: 121 VTSNQLSNIINIIRENQEDLESKLDSPNVRLTNVLVGQILEMLNKHKISASRFFNWVSVQ 180

Query: 181 SCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSIK 240
           SCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEF  KGI+LNHKAFGFLL  LS+E S+K
Sbjct: 181 SCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFGLKGIELNHKAFGFLL-PLSNEHSMK 240

Query: 241 ISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQC 300
           +SV +LVKLLNE GG+CR+SG+MALIEMFCSLGSFGMAKFVIEITE+R+SFY IIVRE+C
Sbjct: 241 LSVVKLVKLLNEAGGTCRLSGIMALIEMFCSLGSFGMAKFVIEITEKRSSFYYIIVREKC 300

Query: 301 RRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNSL 360
           ++ DFEGARCTLDEMRQ GC PD GILNYLLSSLCKNDKFGEAHNL EEMLE++C PNSL
Sbjct: 301 KQKDFEGARCTLDEMRQVGCIPDAGILNYLLSSLCKNDKFGEAHNLLEEMLEQNCSPNSL 360

Query: 361 TFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVDS 420
           TFE+IICHLC+IGNIESAL +LDMMV+ GL PRLSTHAAFVKSYF+S+RYEEAY+YAVDS
Sbjct: 361 TFEIIICHLCKIGNIESALGYLDMMVAGGLMPRLSTHAAFVKSYFSSQRYEEAYQYAVDS 420

Query: 421 SLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGKE 480
           SLK+   +NATYSLLATLHEKRGNLVDAQKILSEL+DAGL+P+F VY R+LKKLQ+QG+ 
Sbjct: 421 SLKYVTTQNATYSLLATLHEKRGNLVDAQKILSELMDAGLKPHFHVYTRLLKKLQVQGRG 480

Query: 481 DLANDLKGKLSNVSLHSGIQT 502
           DLANDLK K+SNVSL SGIQT
Sbjct: 481 DLANDLKRKISNVSLQSGIQT 493

BLAST of Lsi05G005590 vs. ExPASy TrEMBL
Match: A0A5D3D9T8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003980 PE=4 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 1.9e-220
Identity = 398/502 (79.28%), Postives = 436/502 (86.85%), Query Frame = 0

Query: 1   MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFL-RLYTTPASDSAAGSSL 60
           MEIPCL RNLRNFS+PYFYSIYSFA +SPFP        YRF  R YTTPASDSAAGSSL
Sbjct: 1   MEIPCLSRNLRNFSNPYFYSIYSFAPYSPFP-------LYRFFSRFYTTPASDSAAGSSL 60

Query: 61  ICNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSCRSFSSSSYEKPQCGTGNLNVFKP 120
           ICNSTSQSV SLCLFERCNG T DLNL LFRH YRSCRSFSS S +K Q GTGNLN+ KP
Sbjct: 61  ICNSTSQSVSSLCLFERCNGRTSDLNLALFRHHYRSCRSFSSFSLKKLQRGTGNLNLSKP 120

Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
            ATS +FW II+II+ N+EDLESKLD+LNV LTN LVV+I  +LN  KISAFRFFNWV V
Sbjct: 121 IATSEKFWQIIDIIQINQEDLESKLDSLNVRLTNVLVVEILGMLNKRKISAFRFFNWVSV 180

Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
           Q C+FP NSDVYSLLIDNFGRLDDYEGILP LIEF RKGI+LNHKAFGFLL  L++EDS+
Sbjct: 181 QWCRFPSNSDVYSLLIDNFGRLDDYEGILPFLIEFSRKGIELNHKAFGFLL-PLANEDSM 240

Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
           K SV +LVK+LN+  G+CRISGV ALIEMFCS+GS  MAKFVIEITE+R+SFY IIVREQ
Sbjct: 241 KSSVIKLVKMLNKAEGTCRISGVKALIEMFCSVGSSEMAKFVIEITEKRSSFYYIIVREQ 300

Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
           C+R DFEGARCTLDEMRQ GC PD GI NYLLSSLCKNDKFGEAHNLFEEMLE++CPPNS
Sbjct: 301 CQRKDFEGARCTLDEMRQAGCLPDAGIFNYLLSSLCKNDKFGEAHNLFEEMLEQNCPPNS 360

Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
           L+FEVIICHLC+IGNIESAL FLD MV+RGL+PRLSTHA FVKSYF SRRYEEAY+YAVD
Sbjct: 361 LSFEVIICHLCKIGNIESALGFLDTMVARGLQPRLSTHATFVKSYFYSRRYEEAYQYAVD 420

Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
           SS K+ M +NATYSLLATLHEKRGNLVDAQKILSEL+DAGL+PNF V  RVLKKLQ+QG+
Sbjct: 421 SSSKYVMTQNATYSLLATLHEKRGNLVDAQKILSELVDAGLKPNFHVCKRVLKKLQVQGR 480

Query: 481 EDLANDLKGKLSNVSLHSGIQT 502
           EDLANDLKGKLSNV L  GI+T
Sbjct: 481 EDLANDLKGKLSNVGLQIGIRT 494

BLAST of Lsi05G005590 vs. NCBI nr
Match: XP_022932243.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 879.4 bits (2271), Expect = 1.5e-251
Identity = 441/503 (87.67%), Postives = 461/503 (91.65%), Query Frame = 0

Query: 1   MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
           M I  L RNLR+FS PYFYSIYSFA HSPFPSSSPSKH+ RF+R YT P SDSAA S L+
Sbjct: 1   MGITSLSRNLRDFSHPYFYSIYSFAPHSPFPSSSPSKHFGRFIRFYTAPTSDSAARSPLL 60

Query: 61  CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSC-RSFSSSSYEKPQCGTGNLNVFKP 120
           CNSTSQSVPSLCLFERCNG T DLNLGLFR  YRSC RSFSS S+EKPQ GTG LNVFKP
Sbjct: 61  CNSTSQSVPSLCLFERCNGVTKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKP 120

Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
           N TSNQFWDIINIIR N+EDLESKLD+LNVS TNALV QIFRVLNN+K+SAFRFFNWVRV
Sbjct: 121 NVTSNQFWDIINIIRANQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRV 180

Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
           QSCKFPCNSD+YSLLIDNFGRLDDYEGILPVL EFR+KG+ LNHKAF FL V LSDEDSI
Sbjct: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSI 240

Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
           KI VERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERR SFYNIIVREQ
Sbjct: 241 KICVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRTSFYNIIVREQ 300

Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
           CRRNDFEGARCTLDEMRQ GCSPDVGILNYLLSSLCKNDK  EA NLFEEMLERDCPPNS
Sbjct: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKLSEAQNLFEEMLERDCPPNS 360

Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
           LTFEVIICHLCEIGNIESAL+FLDMMVSRGLEPRLSTHAAFVKSYFNS+RYEEAYRY +D
Sbjct: 361 LTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYRYTID 420

Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
           SSLKH MA+NATYSLLATLHEKRGNLVDAQK+L ELIDAGLRPNFPVYMRVLKKLQ+QG+
Sbjct: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGR 480

Query: 481 EDLANDLKGKLSNVSLHSGIQTG 503
           EDLANDLKGK SNVS+   IQTG
Sbjct: 481 EDLANDLKGKFSNVSMQRDIQTG 503

BLAST of Lsi05G005590 vs. NCBI nr
Match: KAG7015541.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 877.9 bits (2267), Expect = 4.3e-251
Identity = 440/503 (87.48%), Postives = 460/503 (91.45%), Query Frame = 0

Query: 1   MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
           M I  L RNLR+FS PYFYSIYSFA HSPFPSSSPSKH+ RF+R YT P SDSAA S L+
Sbjct: 1   MGITSLSRNLRDFSHPYFYSIYSFAPHSPFPSSSPSKHFGRFIRFYTAPTSDSAARSPLL 60

Query: 61  CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSC-RSFSSSSYEKPQCGTGNLNVFKP 120
           CNSTSQSVPSLCLFERCNG T DLNLGLFR  YRSC RSFSS S+EKPQ GTG LNVFKP
Sbjct: 61  CNSTSQSVPSLCLFERCNGVTKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKP 120

Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
           N TSNQFWDIINIIR N+EDLESKLD+LNVS TNALV QIFRVLNN+K+SAFRFFNWVRV
Sbjct: 121 NVTSNQFWDIINIIRANQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRV 180

Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
           QSCKFPCNSD+YSLLIDNFGRLDDYEGILPVL EFR+KG+ LNHKAF FL V LSDEDSI
Sbjct: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSI 240

Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
           KI VERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERR SFYNIIVREQ
Sbjct: 241 KICVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRTSFYNIIVREQ 300

Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
           CRRNDFEGARCTLDEMRQ GCSPDVGILNYLLSSLCKNDK  EA NLFEEMLERDCPPNS
Sbjct: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKLSEAQNLFEEMLERDCPPNS 360

Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
           LTFEVIICH CEIGNIESAL+FLDMMVSRGLEPRLSTHAAFVKSYFNS+RYEEAYRY +D
Sbjct: 361 LTFEVIICHFCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYRYTID 420

Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
           SSLKH MA+NATYSLLATLHEKRGNLVDAQK+L ELIDAGLRPNFPVYMRVLKKLQ+QG+
Sbjct: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGR 480

Query: 481 EDLANDLKGKLSNVSLHSGIQTG 503
           EDLANDLKGK SNVS+   IQTG
Sbjct: 481 EDLANDLKGKFSNVSMQRDIQTG 503

BLAST of Lsi05G005590 vs. NCBI nr
Match: XP_023007595.1 (pentatricopeptide repeat-containing protein At1g09820-like [Cucurbita maxima])

HSP 1 Score: 874.4 bits (2258), Expect = 4.7e-250
Identity = 438/503 (87.08%), Postives = 461/503 (91.65%), Query Frame = 0

Query: 1   MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
           M I  L RNLR+FS PYFYSIYSFA HSPFPSSSPSKH+ RF+R YT P SDSAA S L+
Sbjct: 1   MGITSLSRNLRDFSHPYFYSIYSFAPHSPFPSSSPSKHFGRFIRFYTAPTSDSAARSPLL 60

Query: 61  CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSC-RSFSSSSYEKPQCGTGNLNVFKP 120
           CNST QSVPSLCLFERCNG T DLNLGLFR  YRSC RSFSS S+EKPQ GTG LNVF P
Sbjct: 61  CNSTPQSVPSLCLFERCNGVTKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFNP 120

Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
           N TSNQFWDIINIIR N+E+LESKLD+LNVS TNALV QIFRVLNN+K+SAFRFFNWV+V
Sbjct: 121 NVTSNQFWDIINIIRANQENLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVKV 180

Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
           QSCKFPCNSD+YSLLIDNFGRLDDYEGI+PVL EFR+KG+ LNHKAF FL V LS++DSI
Sbjct: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGIIPVLNEFRQKGVGLNHKAFEFLHVNLSNDDSI 240

Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
           KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERR SFYNIIVREQ
Sbjct: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRTSFYNIIVREQ 300

Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
           CRRNDFEGARCTLDEMRQ GCSPDVGILNYLLSSLCKNDKF EAHNLFEEMLERDCPPNS
Sbjct: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAHNLFEEMLERDCPPNS 360

Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
           LTFEVIICHLCEIGNIESAL+FLD MVSRGLEPRLSTHAAFVKSYFNS+RYEEAYRY VD
Sbjct: 361 LTFEVIICHLCEIGNIESALNFLDTMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYRYTVD 420

Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
           SSLKH MA+NATYSLLATLHEKRGNLVDAQKIL ELIDAGLRPNFPVYMRVLKKLQ+QG+
Sbjct: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKILCELIDAGLRPNFPVYMRVLKKLQVQGR 480

Query: 481 EDLANDLKGKLSNVSLHSGIQTG 503
           EDLANDLKGK SNVS+   IQTG
Sbjct: 481 EDLANDLKGKFSNVSMQRDIQTG 503

BLAST of Lsi05G005590 vs. NCBI nr
Match: XP_038906259.1 (pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like isoform X2 [Benincasa hispida])

HSP 1 Score: 865.9 bits (2236), Expect = 1.7e-247
Identity = 440/493 (89.25%), Postives = 458/493 (92.90%), Query Frame = 0

Query: 1   MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPA-SDSAAGSSL 60
           MEI CL RNLRNFS+PYFYSIYSF  HSPFPSSSPSKH +RF R YTTPA SDS A SSL
Sbjct: 1   MEISCLSRNLRNFSNPYFYSIYSFVPHSPFPSSSPSKHSHRFCRFYTTPAISDSTADSSL 60

Query: 61  ICNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSCRSFSSSSYEKPQCGTGNLNVFKP 120
           ICNS+SQSVPSLCLFERCNGGTLDLN GLFRH YRS RSFSSSS+EKPQ GTGNLNV KP
Sbjct: 61  ICNSSSQSVPSLCLFERCNGGTLDLNHGLFRHHYRSFRSFSSSSFEKPQSGTGNLNVSKP 120

Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
           NATSNQFWD+INIIR N+EDLESKLD+LNVSL NA VVQIFRVLNN KISAFRFFNWVRV
Sbjct: 121 NATSNQFWDVINIIRRNQEDLESKLDSLNVSLNNAFVVQIFRVLNNRKISAFRFFNWVRV 180

Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
           QSCKFPCNSDVYSLLIDNFG LD+YEGILPVLIEF+RKGIDLNHKAF FLLVQL +EDSI
Sbjct: 181 QSCKFPCNSDVYSLLIDNFGSLDNYEGILPVLIEFKRKGIDLNHKAFEFLLVQLPNEDSI 240

Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
           KISVERLVKLLNEVGGSCRISGVMALIEMFCS GSFG+AKFVIEITERRASF NIIVREQ
Sbjct: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSRGSFGLAKFVIEITERRASFCNIIVREQ 300

Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
           CRR++FEGA+CTLDEMRQ G  PDVGILNYLLSSLCKNDKFGEAH LFEEMLE DCPPNS
Sbjct: 301 CRRSNFEGAKCTLDEMRQVG-YPDVGILNYLLSSLCKNDKFGEAHKLFEEMLEGDCPPNS 360

Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
           LTFEVIICHLCEIGNIESA S+LDMMVSRGLEPR STHAAFVKSYFNSRRYEEAYRY VD
Sbjct: 361 LTFEVIICHLCEIGNIESAHSYLDMMVSRGLEPRHSTHAAFVKSYFNSRRYEEAYRYVVD 420

Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
           SSLKH MA+N TYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFP+YMRVLKKLQLQGK
Sbjct: 421 SSLKHVMARNTTYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPLYMRVLKKLQLQGK 480

Query: 481 EDLANDLKGKLSN 493
           EDLANDLKGK +N
Sbjct: 481 EDLANDLKGKFNN 492

BLAST of Lsi05G005590 vs. NCBI nr
Match: XP_023552923.1 (pentatricopeptide repeat-containing protein At1g09820-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 865.9 bits (2236), Expect = 1.7e-247
Identity = 436/503 (86.68%), Postives = 457/503 (90.85%), Query Frame = 0

Query: 1   MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
           M I  L RNLR+FS PYFYSIYSFA  SPFPSSSPSKH+ RF+R YT P S SAA S L+
Sbjct: 1   MGITSLSRNLRDFSHPYFYSIYSFAPPSPFPSSSPSKHFGRFIRFYTAPTSHSAARSPLL 60

Query: 61  CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSC-RSFSSSSYEKPQCGTGNLNVFKP 120
           CNSTSQSVPSLCL ERCNG   DLNLGLFR  YRSC RSFSS S+EKPQ GTG LNVFKP
Sbjct: 61  CNSTSQSVPSLCLLERCNGVAKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKP 120

Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
           N TSNQFWDIINIIR N+EDLESKLD+LNVS TNALV QIFRVLNN+K+SAFRFFNWVRV
Sbjct: 121 NVTSNQFWDIINIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRV 180

Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
           QSCKFPCNSD+YSLLIDNFGRLDDYEGILPVL EFR+KG+ LNHKAF FL V LSDEDSI
Sbjct: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSI 240

Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
           KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFV EITE+R SFYNIIVREQ
Sbjct: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQ 300

Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
           CRRNDFEGARCTLDEMRQ GCSPDVGILNYLLSSLCKNDKF EA NLFEEMLERDCPPNS
Sbjct: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNS 360

Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
           LTFEVIICHLCEIGNIESAL+FLDMMVSRGLEPRLSTHAAFVKSYFNS+RYEEAY Y +D
Sbjct: 361 LTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTID 420

Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
           SSLKH MA+NATYSLLATLHEKRGNLVDAQK+L ELIDAGLRPNFPVYMRVLKKLQ+QG+
Sbjct: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGR 480

Query: 481 EDLANDLKGKLSNVSLHSGIQTG 503
           EDLANDLKGK SNVS+   IQTG
Sbjct: 481 EDLANDLKGKFSNVSMQRDIQTG 503

BLAST of Lsi05G005590 vs. TAIR 10
Match: AT1G52640.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 3.9e-24
Identity = 100/394 (25.38%), Postives = 165/394 (41.88%), Query Frame = 0

Query: 124 NQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRVQSCK 183
           N+   +++  R  ++DLE  L   +  +++ LV Q+ +   N    A RFF W R +   
Sbjct: 39  NEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWAR-RIPD 98

Query: 184 FPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKG-IDLNHKAFGFLLVQLSD------- 243
           F  + + Y +L++  G    +  +   LIE R     +++ K F  +    S        
Sbjct: 99  FAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEA 158

Query: 244 --------EDSIKISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITER 303
                   E  IK  V+ L +LL+ +   C    V    E F     FG+          
Sbjct: 159 CRAFNRMVEFGIKPCVDDLDQLLHSL---CDKKHVNHAQEFFGKAKGFGIVP-------- 218

Query: 304 RASFYNIIVREQCRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLF 363
            A  Y+I+VR   R  D  GAR   DEM +  C  D+   N LL +LCK+      + +F
Sbjct: 219 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 278

Query: 364 EEMLERDCPPNSLTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNS 423
           +EM      P++ +F + I   C+ G++ SA   LD M    L P + T    +K+   +
Sbjct: 279 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 338

Query: 424 RRYEEAYRYAVDSSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVY 483
            + ++AY    +   K A     TY+ +   H     +  A K+LS +      P+   Y
Sbjct: 339 EKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTY 398

Query: 484 MRVLKKLQLQGKEDLANDLKGKLSNVSLHSGIQT 502
             VLK L   G+ D A ++   +S    +  + T
Sbjct: 399 NMVLKLLIRIGRFDRATEIWEGMSERKFYPTVAT 420

BLAST of Lsi05G005590 vs. TAIR 10
Match: AT1G09820.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-23
Identity = 84/319 (26.33%), Postives = 145/319 (45.45%), Query Frame = 0

Query: 187 NSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSIKISVERL 246
           N   +++LID F + D+  G + V  E   + +  N  ++  L+  L +   I  ++   
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMR 354

Query: 247 VKLLNEVGGSCRISGVMALIEMFC-------SLGSFGMAKFVIEITERRASFYNIIVREQ 306
            K+++  G    +    ALI  FC       +L  FG  K    +   R   YN+++   
Sbjct: 355 DKMVS-AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR--MYNMLIDAY 414

Query: 307 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 366
           C+    +      +EM + G  PDVG  N L++ LC+N     A  LF+++  +   P+ 
Sbjct: 415 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDL 474

Query: 367 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 426
           +TF +++   C  G    A   L  M   GL+PR  T+   +K Y      + A      
Sbjct: 475 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 534

Query: 427 SSLKHAMAKN-ATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQG 486
              +  +  N A+Y++L   + ++G L DA  +L+E+++ GL PN   Y  V +++  QG
Sbjct: 535 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 594

Query: 487 KEDLANDLKGKLSNVSLHS 498
                 D++G L NVS  S
Sbjct: 595 ---FVPDIEGHLFNVSTKS 606

BLAST of Lsi05G005590 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 8.9e-21
Identity = 67/244 (27.46%), Postives = 114/244 (46.72%), Query Frame = 0

Query: 245 RLVKLLNEVGGSCRISGVM---ALIEMFCSLGSFGMAKFVIE--ITERRASFYNIIVREQ 304
           +  K+L  + GS  +  V+    +I  +C  G    A  V++          YN I+R  
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSL 214

Query: 305 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 364
           C     + A   LD M Q  C PDV     L+ + C++   G A  L +EM +R C P+ 
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274

Query: 365 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 424
           +T+ V++  +C+ G ++ A+ FL+ M S G +P + TH   ++S  ++ R+ +A +   D
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334

Query: 425 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 484
              K       T+++L     ++G L  A  IL ++   G +PN   Y  +L     + K
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394

BLAST of Lsi05G005590 vs. TAIR 10
Match: AT5G61400.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-20
Identity = 60/233 (25.75%), Postives = 108/233 (46.35%), Query Frame = 0

Query: 253 VGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQCRRNDFEGARCTL 312
           V G C+   ++    +F  +  FG+        +     YN ++   C+  +   A   L
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGV--------DPNLYVYNCLIHGHCKSGNMLEAVGLL 370

Query: 313 DEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNSLTFEVIICHLCEI 372
            EM     SPDV     L++ LC  D+  EA+ LF++M      P+S T+  +I   C+ 
Sbjct: 371 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 430

Query: 373 GNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVDSSLKHAMAKNATY 432
            N+E AL     M + G+EP + T +  +  Y N R  + A     + ++K  +    TY
Sbjct: 431 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 490

Query: 433 SLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGKEDLAND 486
           + L   H K  N+ +A ++ S++++AG+ PN   +  ++     +G+  +A D
Sbjct: 491 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535

BLAST of Lsi05G005590 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 1.5e-20
Identity = 73/308 (23.70%), Postives = 138/308 (44.81%), Query Frame = 0

Query: 187 NSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSIKISVERL 246
           N   Y+ LI+ + +    E  + V+     + +  N + +  L+     +   K +V + 
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI-----KGYCKSNVHKA 451

Query: 247 VKLLNEVGGSCRISGVM---ALIEMFCSLGSFGMAKFVIEITERRASF-----YNIIVRE 306
           + +LN++     +  V+   +LI+  C  G+F  A  ++ +   R        Y  ++  
Sbjct: 452 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 511

Query: 307 QCRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPN 366
            C+    E A    D + Q G +P+V +   L+   CK  K  EAH + E+ML ++C PN
Sbjct: 512 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 571

Query: 367 SLTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAV 426
           SLTF  +I  LC  G ++ A    + MV  GL+P +ST    +        ++ AY    
Sbjct: 572 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 631

Query: 427 DSSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQG 486
                       TY+     + + G L+DA+ +++++ + G+ P+   Y  ++K     G
Sbjct: 632 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 691

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SSR65.4e-2325.38Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidop... [more]
O045041.6e-2226.33Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX... [more]
Q3EDF81.3e-1927.46Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9FLJ41.6e-1925.75Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana OX... [more]
Q9LSL92.1e-1923.70Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1F1487.1e-25287.67pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like OS=Cuc... [more]
A0A6J1L3E82.3e-25087.08pentatricopeptide repeat-containing protein At1g09820-like OS=Cucurbita maxima O... [more]
A0A6J1CJ381.7e-22478.26pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like OS=Mom... [more]
A0A0A0L3E76.3e-22480.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637180 PE=4 SV=1[more]
A0A5D3D9T81.9e-22079.28Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
XP_022932243.11.5e-25187.67pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like [Cucur... [more]
KAG7015541.14.3e-25187.48Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_023007595.14.7e-25087.08pentatricopeptide repeat-containing protein At1g09820-like [Cucurbita maxima][more]
XP_038906259.11.7e-24789.25pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like isofor... [more]
XP_023552923.11.7e-24786.68pentatricopeptide repeat-containing protein At1g09820-like [Cucurbita pepo subsp... [more]
Match NameE-valueIdentityDescription
AT1G52640.13.9e-2425.38Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G09820.11.1e-2326.33Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G09900.18.9e-2127.46Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G61400.11.2e-2025.75Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G65560.11.5e-2023.70Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 322..370
e-value: 2.6E-12
score: 46.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 361..392
e-value: 2.5E-5
score: 22.2
coord: 328..358
e-value: 2.4E-8
score: 31.6
coord: 292..324
e-value: 2.0E-6
score: 25.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 292..320
e-value: 0.16
score: 12.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 323..357
score: 11.575191
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 288..322
score: 9.832344
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 358..392
score: 10.775016
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 169..431
e-value: 1.2E-29
score: 105.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 327..464
NoneNo IPR availablePANTHERPTHR47936FAMILY NOT NAMEDcoord: 3..500
NoneNo IPR availablePANTHERPTHR47936:SF3REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 3..500

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G005590.1Lsi05G005590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding