Homology
BLAST of Lsi05G005590 vs. ExPASy Swiss-Prot
Match:
Q9SSR6 (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g52640 PE=2 SV=1)
HSP 1 Score: 110.5 bits (275), Expect = 5.4e-23
Identity = 100/394 (25.38%), Postives = 165/394 (41.88%), Query Frame = 0
Query: 124 NQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRVQSCK 183
N+ +++ R ++DLE L + +++ LV Q+ + N A RFF W R +
Sbjct: 39 NEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWAR-RIPD 98
Query: 184 FPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKG-IDLNHKAFGFLLVQLSD------- 243
F + + Y +L++ G + + LIE R +++ K F + S
Sbjct: 99 FAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEA 158
Query: 244 --------EDSIKISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITER 303
E IK V+ L +LL+ + C V E F FG+
Sbjct: 159 CRAFNRMVEFGIKPCVDDLDQLLHSL---CDKKHVNHAQEFFGKAKGFGIVP-------- 218
Query: 304 RASFYNIIVREQCRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLF 363
A Y+I+VR R D GAR DEM + C D+ N LL +LCK+ + +F
Sbjct: 219 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 278
Query: 364 EEMLERDCPPNSLTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNS 423
+EM P++ +F + I C+ G++ SA LD M L P + T +K+ +
Sbjct: 279 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 338
Query: 424 RRYEEAYRYAVDSSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVY 483
+ ++AY + K A TY+ + H + A K+LS + P+ Y
Sbjct: 339 EKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTY 398
Query: 484 MRVLKKLQLQGKEDLANDLKGKLSNVSLHSGIQT 502
VLK L G+ D A ++ +S + + T
Sbjct: 399 NMVLKLLIRIGRFDRATEIWEGMSERKFYPTVAT 420
BLAST of Lsi05G005590 vs. ExPASy Swiss-Prot
Match:
O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)
HSP 1 Score: 109.0 bits (271), Expect = 1.6e-22
Identity = 84/319 (26.33%), Postives = 145/319 (45.45%), Query Frame = 0
Query: 187 NSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSIKISVERL 246
N +++LID F + D+ G + V E + + N ++ L+ L + I ++
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMR 354
Query: 247 VKLLNEVGGSCRISGVMALIEMFC-------SLGSFGMAKFVIEITERRASFYNIIVREQ 306
K+++ G + ALI FC +L FG K + R YN+++
Sbjct: 355 DKMVS-AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR--MYNMLIDAY 414
Query: 307 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 366
C+ + +EM + G PDVG N L++ LC+N A LF+++ + P+
Sbjct: 415 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDL 474
Query: 367 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 426
+TF +++ C G A L M GL+PR T+ +K Y + A
Sbjct: 475 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 534
Query: 427 SSLKHAMAKN-ATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQG 486
+ + N A+Y++L + ++G L DA +L+E+++ GL PN Y V +++ QG
Sbjct: 535 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 594
Query: 487 KEDLANDLKGKLSNVSLHS 498
D++G L NVS S
Sbjct: 595 ---FVPDIEGHLFNVSTKS 606
BLAST of Lsi05G005590 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 1.3e-19
Identity = 67/244 (27.46%), Postives = 114/244 (46.72%), Query Frame = 0
Query: 245 RLVKLLNEVGGSCRISGVM---ALIEMFCSLGSFGMAKFVIE--ITERRASFYNIIVREQ 304
+ K+L + GS + V+ +I +C G A V++ YN I+R
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSL 214
Query: 305 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 364
C + A LD M Q C PDV L+ + C++ G A L +EM +R C P+
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 365 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 424
+T+ V++ +C+ G ++ A+ FL+ M S G +P + TH ++S ++ R+ +A + D
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 425 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 484
K T+++L ++G L A IL ++ G +PN Y +L + K
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
BLAST of Lsi05G005590 vs. ExPASy Swiss-Prot
Match:
Q9FLJ4 (Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana OX=3702 GN=At5g61400 PE=2 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 1.6e-19
Identity = 60/233 (25.75%), Postives = 108/233 (46.35%), Query Frame = 0
Query: 253 VGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQCRRNDFEGARCTL 312
V G C+ ++ +F + FG+ + YN ++ C+ + A L
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGV--------DPNLYVYNCLIHGHCKSGNMLEAVGLL 370
Query: 313 DEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNSLTFEVIICHLCEI 372
EM SPDV L++ LC D+ EA+ LF++M P+S T+ +I C+
Sbjct: 371 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 430
Query: 373 GNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVDSSLKHAMAKNATY 432
N+E AL M + G+EP + T + + Y N R + A + ++K + TY
Sbjct: 431 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 490
Query: 433 SLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGKEDLAND 486
+ L H K N+ +A ++ S++++AG+ PN + ++ +G+ +A D
Sbjct: 491 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
BLAST of Lsi05G005590 vs. ExPASy Swiss-Prot
Match:
Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 2.1e-19
Identity = 73/308 (23.70%), Postives = 138/308 (44.81%), Query Frame = 0
Query: 187 NSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSIKISVERL 246
N Y+ LI+ + + E + V+ + + N + + L+ + K +V +
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI-----KGYCKSNVHKA 451
Query: 247 VKLLNEVGGSCRISGVM---ALIEMFCSLGSFGMAKFVIEITERRASF-----YNIIVRE 306
+ +LN++ + V+ +LI+ C G+F A ++ + R Y ++
Sbjct: 452 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 511
Query: 307 QCRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPN 366
C+ E A D + Q G +P+V + L+ CK K EAH + E+ML ++C PN
Sbjct: 512 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 571
Query: 367 SLTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAV 426
SLTF +I LC G ++ A + MV GL+P +ST + ++ AY
Sbjct: 572 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 631
Query: 427 DSSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQG 486
TY+ + + G L+DA+ +++++ + G+ P+ Y ++K G
Sbjct: 632 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 691
BLAST of Lsi05G005590 vs. ExPASy TrEMBL
Match:
A0A6J1F148 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111438608 PE=4 SV=1)
HSP 1 Score: 879.4 bits (2271), Expect = 7.1e-252
Identity = 441/503 (87.67%), Postives = 461/503 (91.65%), Query Frame = 0
Query: 1 MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
M I L RNLR+FS PYFYSIYSFA HSPFPSSSPSKH+ RF+R YT P SDSAA S L+
Sbjct: 1 MGITSLSRNLRDFSHPYFYSIYSFAPHSPFPSSSPSKHFGRFIRFYTAPTSDSAARSPLL 60
Query: 61 CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSC-RSFSSSSYEKPQCGTGNLNVFKP 120
CNSTSQSVPSLCLFERCNG T DLNLGLFR YRSC RSFSS S+EKPQ GTG LNVFKP
Sbjct: 61 CNSTSQSVPSLCLFERCNGVTKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKP 120
Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
N TSNQFWDIINIIR N+EDLESKLD+LNVS TNALV QIFRVLNN+K+SAFRFFNWVRV
Sbjct: 121 NVTSNQFWDIINIIRANQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRV 180
Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
QSCKFPCNSD+YSLLIDNFGRLDDYEGILPVL EFR+KG+ LNHKAF FL V LSDEDSI
Sbjct: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSI 240
Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
KI VERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERR SFYNIIVREQ
Sbjct: 241 KICVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRTSFYNIIVREQ 300
Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
CRRNDFEGARCTLDEMRQ GCSPDVGILNYLLSSLCKNDK EA NLFEEMLERDCPPNS
Sbjct: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKLSEAQNLFEEMLERDCPPNS 360
Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
LTFEVIICHLCEIGNIESAL+FLDMMVSRGLEPRLSTHAAFVKSYFNS+RYEEAYRY +D
Sbjct: 361 LTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYRYTID 420
Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
SSLKH MA+NATYSLLATLHEKRGNLVDAQK+L ELIDAGLRPNFPVYMRVLKKLQ+QG+
Sbjct: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGR 480
Query: 481 EDLANDLKGKLSNVSLHSGIQTG 503
EDLANDLKGK SNVS+ IQTG
Sbjct: 481 EDLANDLKGKFSNVSMQRDIQTG 503
BLAST of Lsi05G005590 vs. ExPASy TrEMBL
Match:
A0A6J1L3E8 (pentatricopeptide repeat-containing protein At1g09820-like OS=Cucurbita maxima OX=3661 GN=LOC111500167 PE=4 SV=1)
HSP 1 Score: 874.4 bits (2258), Expect = 2.3e-250
Identity = 438/503 (87.08%), Postives = 461/503 (91.65%), Query Frame = 0
Query: 1 MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
M I L RNLR+FS PYFYSIYSFA HSPFPSSSPSKH+ RF+R YT P SDSAA S L+
Sbjct: 1 MGITSLSRNLRDFSHPYFYSIYSFAPHSPFPSSSPSKHFGRFIRFYTAPTSDSAARSPLL 60
Query: 61 CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSC-RSFSSSSYEKPQCGTGNLNVFKP 120
CNST QSVPSLCLFERCNG T DLNLGLFR YRSC RSFSS S+EKPQ GTG LNVF P
Sbjct: 61 CNSTPQSVPSLCLFERCNGVTKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFNP 120
Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
N TSNQFWDIINIIR N+E+LESKLD+LNVS TNALV QIFRVLNN+K+SAFRFFNWV+V
Sbjct: 121 NVTSNQFWDIINIIRANQENLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVKV 180
Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
QSCKFPCNSD+YSLLIDNFGRLDDYEGI+PVL EFR+KG+ LNHKAF FL V LS++DSI
Sbjct: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGIIPVLNEFRQKGVGLNHKAFEFLHVNLSNDDSI 240
Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERR SFYNIIVREQ
Sbjct: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRTSFYNIIVREQ 300
Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
CRRNDFEGARCTLDEMRQ GCSPDVGILNYLLSSLCKNDKF EAHNLFEEMLERDCPPNS
Sbjct: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAHNLFEEMLERDCPPNS 360
Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
LTFEVIICHLCEIGNIESAL+FLD MVSRGLEPRLSTHAAFVKSYFNS+RYEEAYRY VD
Sbjct: 361 LTFEVIICHLCEIGNIESALNFLDTMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYRYTVD 420
Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
SSLKH MA+NATYSLLATLHEKRGNLVDAQKIL ELIDAGLRPNFPVYMRVLKKLQ+QG+
Sbjct: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKILCELIDAGLRPNFPVYMRVLKKLQVQGR 480
Query: 481 EDLANDLKGKLSNVSLHSGIQTG 503
EDLANDLKGK SNVS+ IQTG
Sbjct: 481 EDLANDLKGKFSNVSMQRDIQTG 503
BLAST of Lsi05G005590 vs. ExPASy TrEMBL
Match:
A0A6J1CJ38 (pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111012070 PE=4 SV=1)
HSP 1 Score: 788.5 bits (2035), Expect = 1.7e-224
Identity = 414/529 (78.26%), Postives = 443/529 (83.74%), Query Frame = 0
Query: 1 MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKH--------------WYRFLRLY 60
MEI L R LRNFS+P Y IYSF+S SP+PS S H + F Y
Sbjct: 1 MEISGLPRKLRNFSNP--YCIYSFSSQSPYPSCSTFSHPRTLATPTDPSSIILFNFSPFY 60
Query: 61 TTPASDS------AAGSSLICNSTSQSVPSLCLFERCNGGTLDLNLGLFRHR-YRSCRSF 120
+ ASDS AAG SLICN+ S S PSLCLF RCNGG LDLNLGL + R Y +CRSF
Sbjct: 61 SISASDSAESPINAAGCSLICNAISHSAPSLCLFGRCNGGRLDLNLGLLQRRSYTTCRSF 120
Query: 121 SSSSY------EKPQCGTGNLNVFKPNATSNQFWDIINIIRGNREDLESKLDTLNVSLTN 180
SSS+ EKPQCGTGNL+V KPNA NQFWDII IIR N EDLESKL++LN+SLTN
Sbjct: 121 LSSSFNQPTSTEKPQCGTGNLDVSKPNARQNQFWDIIKIIRRNEEDLESKLNSLNLSLTN 180
Query: 181 ALVVQIFRVLNNYKISAFRFFNWVRVQSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIE 240
LV QIFRVLNN K+SAFRFFNW+RVQSCKFP NSDVYSLLIDNFGRLDDYEG+LPVL E
Sbjct: 181 VLVAQIFRVLNNDKVSAFRFFNWIRVQSCKFPGNSDVYSLLIDNFGRLDDYEGMLPVLTE 240
Query: 241 FRRKGIDLNHKAFGFLLVQLSDEDSIKISVERLVKLLNEVGGSCRISGVMALIEMFCSLG 300
FRRKGIDLNHKAF FL VQLS+E SIKISVER++KLLNEVGGSCRISGVM+LIEMFCS G
Sbjct: 241 FRRKGIDLNHKAFVFLHVQLSNEASIKISVERVIKLLNEVGGSCRISGVMSLIEMFCSFG 300
Query: 301 SFGMAKFVIEITERRASFYNIIVREQCRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSS 360
S+GMAKFVIEITERRASFYNIIVREQCRRNDFEGARCTL+EMRQ GCSPDVGILNYLLS
Sbjct: 301 SYGMAKFVIEITERRASFYNIIVREQCRRNDFEGARCTLNEMRQVGCSPDVGILNYLLSC 360
Query: 361 LCKNDKFGEAHNLFEEMLERDCPPNSLTFEVIICHLCEIGNIESALSFLDMMVSRGLEPR 420
LCKND+F EA ++FE ML++DCPPNSLTFEVIICHLCEIG IESALSFLDMMVSRGLEPR
Sbjct: 361 LCKNDRFDEAQSMFEAMLQQDCPPNSLTFEVIICHLCEIGKIESALSFLDMMVSRGLEPR 420
Query: 421 LSTHAAFVKSYFNSRRYEEAYRYAVDSSLKHAMAKNATYSLLATLHEKRGNLVDAQKILS 480
LSTHAAFVKSYFNS+RYEEAYRYAVDSS KHA A+NATYSLLATLHEKRGNLVDAQKILS
Sbjct: 421 LSTHAAFVKSYFNSQRYEEAYRYAVDSSSKHATAQNATYSLLATLHEKRGNLVDAQKILS 480
Query: 481 ELIDAGLRPNFPVYMRVLKKLQLQGKEDLANDLKGKLSNVSLHSGIQTG 503
ELIDAGLRPNFPVY RV KKLQLQGKEDLANDLKGK S VS GIQTG
Sbjct: 481 ELIDAGLRPNFPVYTRVFKKLQLQGKEDLANDLKGKFSIVSFQCGIQTG 527
BLAST of Lsi05G005590 vs. ExPASy TrEMBL
Match:
A0A0A0L3E7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637180 PE=4 SV=1)
HSP 1 Score: 786.6 bits (2030), Expect = 6.3e-224
Identity = 401/501 (80.04%), Postives = 439/501 (87.62%), Query Frame = 0
Query: 1 MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
MEIPCL RNLRNFS+PYFYSIYSFA SPF YRF R YT ASDSAAGSSLI
Sbjct: 1 MEIPCLSRNLRNFSNPYFYSIYSFAPRSPF-------LLYRFSRFYTILASDSAAGSSLI 60
Query: 61 CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSCRSFSSSSYEKPQCGTGNLNVFKPN 120
CNSTSQSVPSLCLFERCNGGT DLNL LFRH YRSCR+FSS S EK QCGTGNLNV K N
Sbjct: 61 CNSTSQSVPSLCLFERCNGGTSDLNLALFRHHYRSCRAFSSFSLEKRQCGTGNLNVSKRN 120
Query: 121 ATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRVQ 180
TSNQ +IINIIR N+EDLESKLD+ NV LTN LV QI +LN +KISA RFFNWV VQ
Sbjct: 121 VTSNQLSNIINIIRENQEDLESKLDSPNVRLTNVLVGQILEMLNKHKISASRFFNWVSVQ 180
Query: 181 SCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSIK 240
SCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEF KGI+LNHKAFGFLL LS+E S+K
Sbjct: 181 SCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFGLKGIELNHKAFGFLL-PLSNEHSMK 240
Query: 241 ISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQC 300
+SV +LVKLLNE GG+CR+SG+MALIEMFCSLGSFGMAKFVIEITE+R+SFY IIVRE+C
Sbjct: 241 LSVVKLVKLLNEAGGTCRLSGIMALIEMFCSLGSFGMAKFVIEITEKRSSFYYIIVREKC 300
Query: 301 RRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNSL 360
++ DFEGARCTLDEMRQ GC PD GILNYLLSSLCKNDKFGEAHNL EEMLE++C PNSL
Sbjct: 301 KQKDFEGARCTLDEMRQVGCIPDAGILNYLLSSLCKNDKFGEAHNLLEEMLEQNCSPNSL 360
Query: 361 TFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVDS 420
TFE+IICHLC+IGNIESAL +LDMMV+ GL PRLSTHAAFVKSYF+S+RYEEAY+YAVDS
Sbjct: 361 TFEIIICHLCKIGNIESALGYLDMMVAGGLMPRLSTHAAFVKSYFSSQRYEEAYQYAVDS 420
Query: 421 SLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGKE 480
SLK+ +NATYSLLATLHEKRGNLVDAQKILSEL+DAGL+P+F VY R+LKKLQ+QG+
Sbjct: 421 SLKYVTTQNATYSLLATLHEKRGNLVDAQKILSELMDAGLKPHFHVYTRLLKKLQVQGRG 480
Query: 481 DLANDLKGKLSNVSLHSGIQT 502
DLANDLK K+SNVSL SGIQT
Sbjct: 481 DLANDLKRKISNVSLQSGIQT 493
BLAST of Lsi05G005590 vs. ExPASy TrEMBL
Match:
A0A5D3D9T8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003980 PE=4 SV=1)
HSP 1 Score: 775.0 bits (2000), Expect = 1.9e-220
Identity = 398/502 (79.28%), Postives = 436/502 (86.85%), Query Frame = 0
Query: 1 MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFL-RLYTTPASDSAAGSSL 60
MEIPCL RNLRNFS+PYFYSIYSFA +SPFP YRF R YTTPASDSAAGSSL
Sbjct: 1 MEIPCLSRNLRNFSNPYFYSIYSFAPYSPFP-------LYRFFSRFYTTPASDSAAGSSL 60
Query: 61 ICNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSCRSFSSSSYEKPQCGTGNLNVFKP 120
ICNSTSQSV SLCLFERCNG T DLNL LFRH YRSCRSFSS S +K Q GTGNLN+ KP
Sbjct: 61 ICNSTSQSVSSLCLFERCNGRTSDLNLALFRHHYRSCRSFSSFSLKKLQRGTGNLNLSKP 120
Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
ATS +FW II+II+ N+EDLESKLD+LNV LTN LVV+I +LN KISAFRFFNWV V
Sbjct: 121 IATSEKFWQIIDIIQINQEDLESKLDSLNVRLTNVLVVEILGMLNKRKISAFRFFNWVSV 180
Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
Q C+FP NSDVYSLLIDNFGRLDDYEGILP LIEF RKGI+LNHKAFGFLL L++EDS+
Sbjct: 181 QWCRFPSNSDVYSLLIDNFGRLDDYEGILPFLIEFSRKGIELNHKAFGFLL-PLANEDSM 240
Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
K SV +LVK+LN+ G+CRISGV ALIEMFCS+GS MAKFVIEITE+R+SFY IIVREQ
Sbjct: 241 KSSVIKLVKMLNKAEGTCRISGVKALIEMFCSVGSSEMAKFVIEITEKRSSFYYIIVREQ 300
Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
C+R DFEGARCTLDEMRQ GC PD GI NYLLSSLCKNDKFGEAHNLFEEMLE++CPPNS
Sbjct: 301 CQRKDFEGARCTLDEMRQAGCLPDAGIFNYLLSSLCKNDKFGEAHNLFEEMLEQNCPPNS 360
Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
L+FEVIICHLC+IGNIESAL FLD MV+RGL+PRLSTHA FVKSYF SRRYEEAY+YAVD
Sbjct: 361 LSFEVIICHLCKIGNIESALGFLDTMVARGLQPRLSTHATFVKSYFYSRRYEEAYQYAVD 420
Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
SS K+ M +NATYSLLATLHEKRGNLVDAQKILSEL+DAGL+PNF V RVLKKLQ+QG+
Sbjct: 421 SSSKYVMTQNATYSLLATLHEKRGNLVDAQKILSELVDAGLKPNFHVCKRVLKKLQVQGR 480
Query: 481 EDLANDLKGKLSNVSLHSGIQT 502
EDLANDLKGKLSNV L GI+T
Sbjct: 481 EDLANDLKGKLSNVGLQIGIRT 494
BLAST of Lsi05G005590 vs. NCBI nr
Match:
XP_022932243.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 879.4 bits (2271), Expect = 1.5e-251
Identity = 441/503 (87.67%), Postives = 461/503 (91.65%), Query Frame = 0
Query: 1 MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
M I L RNLR+FS PYFYSIYSFA HSPFPSSSPSKH+ RF+R YT P SDSAA S L+
Sbjct: 1 MGITSLSRNLRDFSHPYFYSIYSFAPHSPFPSSSPSKHFGRFIRFYTAPTSDSAARSPLL 60
Query: 61 CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSC-RSFSSSSYEKPQCGTGNLNVFKP 120
CNSTSQSVPSLCLFERCNG T DLNLGLFR YRSC RSFSS S+EKPQ GTG LNVFKP
Sbjct: 61 CNSTSQSVPSLCLFERCNGVTKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKP 120
Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
N TSNQFWDIINIIR N+EDLESKLD+LNVS TNALV QIFRVLNN+K+SAFRFFNWVRV
Sbjct: 121 NVTSNQFWDIINIIRANQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRV 180
Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
QSCKFPCNSD+YSLLIDNFGRLDDYEGILPVL EFR+KG+ LNHKAF FL V LSDEDSI
Sbjct: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSI 240
Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
KI VERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERR SFYNIIVREQ
Sbjct: 241 KICVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRTSFYNIIVREQ 300
Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
CRRNDFEGARCTLDEMRQ GCSPDVGILNYLLSSLCKNDK EA NLFEEMLERDCPPNS
Sbjct: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKLSEAQNLFEEMLERDCPPNS 360
Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
LTFEVIICHLCEIGNIESAL+FLDMMVSRGLEPRLSTHAAFVKSYFNS+RYEEAYRY +D
Sbjct: 361 LTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYRYTID 420
Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
SSLKH MA+NATYSLLATLHEKRGNLVDAQK+L ELIDAGLRPNFPVYMRVLKKLQ+QG+
Sbjct: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGR 480
Query: 481 EDLANDLKGKLSNVSLHSGIQTG 503
EDLANDLKGK SNVS+ IQTG
Sbjct: 481 EDLANDLKGKFSNVSMQRDIQTG 503
BLAST of Lsi05G005590 vs. NCBI nr
Match:
KAG7015541.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 877.9 bits (2267), Expect = 4.3e-251
Identity = 440/503 (87.48%), Postives = 460/503 (91.45%), Query Frame = 0
Query: 1 MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
M I L RNLR+FS PYFYSIYSFA HSPFPSSSPSKH+ RF+R YT P SDSAA S L+
Sbjct: 1 MGITSLSRNLRDFSHPYFYSIYSFAPHSPFPSSSPSKHFGRFIRFYTAPTSDSAARSPLL 60
Query: 61 CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSC-RSFSSSSYEKPQCGTGNLNVFKP 120
CNSTSQSVPSLCLFERCNG T DLNLGLFR YRSC RSFSS S+EKPQ GTG LNVFKP
Sbjct: 61 CNSTSQSVPSLCLFERCNGVTKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKP 120
Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
N TSNQFWDIINIIR N+EDLESKLD+LNVS TNALV QIFRVLNN+K+SAFRFFNWVRV
Sbjct: 121 NVTSNQFWDIINIIRANQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRV 180
Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
QSCKFPCNSD+YSLLIDNFGRLDDYEGILPVL EFR+KG+ LNHKAF FL V LSDEDSI
Sbjct: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSI 240
Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
KI VERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERR SFYNIIVREQ
Sbjct: 241 KICVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRTSFYNIIVREQ 300
Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
CRRNDFEGARCTLDEMRQ GCSPDVGILNYLLSSLCKNDK EA NLFEEMLERDCPPNS
Sbjct: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKLSEAQNLFEEMLERDCPPNS 360
Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
LTFEVIICH CEIGNIESAL+FLDMMVSRGLEPRLSTHAAFVKSYFNS+RYEEAYRY +D
Sbjct: 361 LTFEVIICHFCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYRYTID 420
Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
SSLKH MA+NATYSLLATLHEKRGNLVDAQK+L ELIDAGLRPNFPVYMRVLKKLQ+QG+
Sbjct: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGR 480
Query: 481 EDLANDLKGKLSNVSLHSGIQTG 503
EDLANDLKGK SNVS+ IQTG
Sbjct: 481 EDLANDLKGKFSNVSMQRDIQTG 503
BLAST of Lsi05G005590 vs. NCBI nr
Match:
XP_023007595.1 (pentatricopeptide repeat-containing protein At1g09820-like [Cucurbita maxima])
HSP 1 Score: 874.4 bits (2258), Expect = 4.7e-250
Identity = 438/503 (87.08%), Postives = 461/503 (91.65%), Query Frame = 0
Query: 1 MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
M I L RNLR+FS PYFYSIYSFA HSPFPSSSPSKH+ RF+R YT P SDSAA S L+
Sbjct: 1 MGITSLSRNLRDFSHPYFYSIYSFAPHSPFPSSSPSKHFGRFIRFYTAPTSDSAARSPLL 60
Query: 61 CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSC-RSFSSSSYEKPQCGTGNLNVFKP 120
CNST QSVPSLCLFERCNG T DLNLGLFR YRSC RSFSS S+EKPQ GTG LNVF P
Sbjct: 61 CNSTPQSVPSLCLFERCNGVTKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFNP 120
Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
N TSNQFWDIINIIR N+E+LESKLD+LNVS TNALV QIFRVLNN+K+SAFRFFNWV+V
Sbjct: 121 NVTSNQFWDIINIIRANQENLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVKV 180
Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
QSCKFPCNSD+YSLLIDNFGRLDDYEGI+PVL EFR+KG+ LNHKAF FL V LS++DSI
Sbjct: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGIIPVLNEFRQKGVGLNHKAFEFLHVNLSNDDSI 240
Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERR SFYNIIVREQ
Sbjct: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRTSFYNIIVREQ 300
Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
CRRNDFEGARCTLDEMRQ GCSPDVGILNYLLSSLCKNDKF EAHNLFEEMLERDCPPNS
Sbjct: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAHNLFEEMLERDCPPNS 360
Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
LTFEVIICHLCEIGNIESAL+FLD MVSRGLEPRLSTHAAFVKSYFNS+RYEEAYRY VD
Sbjct: 361 LTFEVIICHLCEIGNIESALNFLDTMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYRYTVD 420
Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
SSLKH MA+NATYSLLATLHEKRGNLVDAQKIL ELIDAGLRPNFPVYMRVLKKLQ+QG+
Sbjct: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKILCELIDAGLRPNFPVYMRVLKKLQVQGR 480
Query: 481 EDLANDLKGKLSNVSLHSGIQTG 503
EDLANDLKGK SNVS+ IQTG
Sbjct: 481 EDLANDLKGKFSNVSMQRDIQTG 503
BLAST of Lsi05G005590 vs. NCBI nr
Match:
XP_038906259.1 (pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like isoform X2 [Benincasa hispida])
HSP 1 Score: 865.9 bits (2236), Expect = 1.7e-247
Identity = 440/493 (89.25%), Postives = 458/493 (92.90%), Query Frame = 0
Query: 1 MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPA-SDSAAGSSL 60
MEI CL RNLRNFS+PYFYSIYSF HSPFPSSSPSKH +RF R YTTPA SDS A SSL
Sbjct: 1 MEISCLSRNLRNFSNPYFYSIYSFVPHSPFPSSSPSKHSHRFCRFYTTPAISDSTADSSL 60
Query: 61 ICNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSCRSFSSSSYEKPQCGTGNLNVFKP 120
ICNS+SQSVPSLCLFERCNGGTLDLN GLFRH YRS RSFSSSS+EKPQ GTGNLNV KP
Sbjct: 61 ICNSSSQSVPSLCLFERCNGGTLDLNHGLFRHHYRSFRSFSSSSFEKPQSGTGNLNVSKP 120
Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
NATSNQFWD+INIIR N+EDLESKLD+LNVSL NA VVQIFRVLNN KISAFRFFNWVRV
Sbjct: 121 NATSNQFWDVINIIRRNQEDLESKLDSLNVSLNNAFVVQIFRVLNNRKISAFRFFNWVRV 180
Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
QSCKFPCNSDVYSLLIDNFG LD+YEGILPVLIEF+RKGIDLNHKAF FLLVQL +EDSI
Sbjct: 181 QSCKFPCNSDVYSLLIDNFGSLDNYEGILPVLIEFKRKGIDLNHKAFEFLLVQLPNEDSI 240
Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
KISVERLVKLLNEVGGSCRISGVMALIEMFCS GSFG+AKFVIEITERRASF NIIVREQ
Sbjct: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSRGSFGLAKFVIEITERRASFCNIIVREQ 300
Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
CRR++FEGA+CTLDEMRQ G PDVGILNYLLSSLCKNDKFGEAH LFEEMLE DCPPNS
Sbjct: 301 CRRSNFEGAKCTLDEMRQVG-YPDVGILNYLLSSLCKNDKFGEAHKLFEEMLEGDCPPNS 360
Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
LTFEVIICHLCEIGNIESA S+LDMMVSRGLEPR STHAAFVKSYFNSRRYEEAYRY VD
Sbjct: 361 LTFEVIICHLCEIGNIESAHSYLDMMVSRGLEPRHSTHAAFVKSYFNSRRYEEAYRYVVD 420
Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
SSLKH MA+N TYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFP+YMRVLKKLQLQGK
Sbjct: 421 SSLKHVMARNTTYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPLYMRVLKKLQLQGK 480
Query: 481 EDLANDLKGKLSN 493
EDLANDLKGK +N
Sbjct: 481 EDLANDLKGKFNN 492
BLAST of Lsi05G005590 vs. NCBI nr
Match:
XP_023552923.1 (pentatricopeptide repeat-containing protein At1g09820-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 865.9 bits (2236), Expect = 1.7e-247
Identity = 436/503 (86.68%), Postives = 457/503 (90.85%), Query Frame = 0
Query: 1 MEIPCLFRNLRNFSSPYFYSIYSFASHSPFPSSSPSKHWYRFLRLYTTPASDSAAGSSLI 60
M I L RNLR+FS PYFYSIYSFA SPFPSSSPSKH+ RF+R YT P S SAA S L+
Sbjct: 1 MGITSLSRNLRDFSHPYFYSIYSFAPPSPFPSSSPSKHFGRFIRFYTAPTSHSAARSPLL 60
Query: 61 CNSTSQSVPSLCLFERCNGGTLDLNLGLFRHRYRSC-RSFSSSSYEKPQCGTGNLNVFKP 120
CNSTSQSVPSLCL ERCNG DLNLGLFR YRSC RSFSS S+EKPQ GTG LNVFKP
Sbjct: 61 CNSTSQSVPSLCLLERCNGVAKDLNLGLFRPHYRSCRRSFSSDSFEKPQFGTGELNVFKP 120
Query: 121 NATSNQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRV 180
N TSNQFWDIINIIR N+EDLESKLD+LNVS TNALV QIFRVLNN+K+SAFRFFNWVRV
Sbjct: 121 NVTSNQFWDIINIIRENQEDLESKLDSLNVSFTNALVAQIFRVLNNHKVSAFRFFNWVRV 180
Query: 181 QSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSI 240
QSCKFPCNSD+YSLLIDNFGRLDDYEGILPVL EFR+KG+ LNHKAF FL V LSDEDSI
Sbjct: 181 QSCKFPCNSDIYSLLIDNFGRLDDYEGILPVLNEFRQKGVGLNHKAFEFLHVHLSDEDSI 240
Query: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQ 300
KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFV EITE+R SFYNIIVREQ
Sbjct: 241 KISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVTEITEKRTSFYNIIVREQ 300
Query: 301 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 360
CRRNDFEGARCTLDEMRQ GCSPDVGILNYLLSSLCKNDKF EA NLFEEMLERDCPPNS
Sbjct: 301 CRRNDFEGARCTLDEMRQAGCSPDVGILNYLLSSLCKNDKFSEAQNLFEEMLERDCPPNS 360
Query: 361 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 420
LTFEVIICHLCEIGNIESAL+FLDMMVSRGLEPRLSTHAAFVKSYFNS+RYEEAY Y +D
Sbjct: 361 LTFEVIICHLCEIGNIESALNFLDMMVSRGLEPRLSTHAAFVKSYFNSQRYEEAYWYTID 420
Query: 421 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 480
SSLKH MA+NATYSLLATLHEKRGNLVDAQK+L ELIDAGLRPNFPVYMRVLKKLQ+QG+
Sbjct: 421 SSLKHGMAQNATYSLLATLHEKRGNLVDAQKVLCELIDAGLRPNFPVYMRVLKKLQVQGR 480
Query: 481 EDLANDLKGKLSNVSLHSGIQTG 503
EDLANDLKGK SNVS+ IQTG
Sbjct: 481 EDLANDLKGKFSNVSMQRDIQTG 503
BLAST of Lsi05G005590 vs. TAIR 10
Match:
AT1G52640.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 110.5 bits (275), Expect = 3.9e-24
Identity = 100/394 (25.38%), Postives = 165/394 (41.88%), Query Frame = 0
Query: 124 NQFWDIINIIRGNREDLESKLDTLNVSLTNALVVQIFRVLNNYKISAFRFFNWVRVQSCK 183
N+ +++ R ++DLE L + +++ LV Q+ + N A RFF W R +
Sbjct: 39 NEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWAR-RIPD 98
Query: 184 FPCNSDVYSLLIDNFGRLDDYEGILPVLIEFRRKG-IDLNHKAFGFLLVQLSD------- 243
F + + Y +L++ G + + LIE R +++ K F + S
Sbjct: 99 FAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEA 158
Query: 244 --------EDSIKISVERLVKLLNEVGGSCRISGVMALIEMFCSLGSFGMAKFVIEITER 303
E IK V+ L +LL+ + C V E F FG+
Sbjct: 159 CRAFNRMVEFGIKPCVDDLDQLLHSL---CDKKHVNHAQEFFGKAKGFGIVP-------- 218
Query: 304 RASFYNIIVREQCRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLF 363
A Y+I+VR R D GAR DEM + C D+ N LL +LCK+ + +F
Sbjct: 219 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 278
Query: 364 EEMLERDCPPNSLTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNS 423
+EM P++ +F + I C+ G++ SA LD M L P + T +K+ +
Sbjct: 279 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 338
Query: 424 RRYEEAYRYAVDSSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVY 483
+ ++AY + K A TY+ + H + A K+LS + P+ Y
Sbjct: 339 EKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTY 398
Query: 484 MRVLKKLQLQGKEDLANDLKGKLSNVSLHSGIQT 502
VLK L G+ D A ++ +S + + T
Sbjct: 399 NMVLKLLIRIGRFDRATEIWEGMSERKFYPTVAT 420
BLAST of Lsi05G005590 vs. TAIR 10
Match:
AT1G09820.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 109.0 bits (271), Expect = 1.1e-23
Identity = 84/319 (26.33%), Postives = 145/319 (45.45%), Query Frame = 0
Query: 187 NSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSIKISVERL 246
N +++LID F + D+ G + V E + + N ++ L+ L + I ++
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMR 354
Query: 247 VKLLNEVGGSCRISGVMALIEMFC-------SLGSFGMAKFVIEITERRASFYNIIVREQ 306
K+++ G + ALI FC +L FG K + R YN+++
Sbjct: 355 DKMVS-AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR--MYNMLIDAY 414
Query: 307 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 366
C+ + +EM + G PDVG N L++ LC+N A LF+++ + P+
Sbjct: 415 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDL 474
Query: 367 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 426
+TF +++ C G A L M GL+PR T+ +K Y + A
Sbjct: 475 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 534
Query: 427 SSLKHAMAKN-ATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQG 486
+ + N A+Y++L + ++G L DA +L+E+++ GL PN Y V +++ QG
Sbjct: 535 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 594
Query: 487 KEDLANDLKGKLSNVSLHS 498
D++G L NVS S
Sbjct: 595 ---FVPDIEGHLFNVSTKS 606
BLAST of Lsi05G005590 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 99.4 bits (246), Expect = 8.9e-21
Identity = 67/244 (27.46%), Postives = 114/244 (46.72%), Query Frame = 0
Query: 245 RLVKLLNEVGGSCRISGVM---ALIEMFCSLGSFGMAKFVIE--ITERRASFYNIIVREQ 304
+ K+L + GS + V+ +I +C G A V++ YN I+R
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSL 214
Query: 305 CRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNS 364
C + A LD M Q C PDV L+ + C++ G A L +EM +R C P+
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 365 LTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVD 424
+T+ V++ +C+ G ++ A+ FL+ M S G +P + TH ++S ++ R+ +A + D
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 425 SSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGK 484
K T+++L ++G L A IL ++ G +PN Y +L + K
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
BLAST of Lsi05G005590 vs. TAIR 10
Match:
AT5G61400.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 99.0 bits (245), Expect = 1.2e-20
Identity = 60/233 (25.75%), Postives = 108/233 (46.35%), Query Frame = 0
Query: 253 VGGSCRISGVMALIEMFCSLGSFGMAKFVIEITERRASFYNIIVREQCRRNDFEGARCTL 312
V G C+ ++ +F + FG+ + YN ++ C+ + A L
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGV--------DPNLYVYNCLIHGHCKSGNMLEAVGLL 370
Query: 313 DEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPNSLTFEVIICHLCEI 372
EM SPDV L++ LC D+ EA+ LF++M P+S T+ +I C+
Sbjct: 371 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 430
Query: 373 GNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAVDSSLKHAMAKNATY 432
N+E AL M + G+EP + T + + Y N R + A + ++K + TY
Sbjct: 431 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 490
Query: 433 SLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQGKEDLAND 486
+ L H K N+ +A ++ S++++AG+ PN + ++ +G+ +A D
Sbjct: 491 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
BLAST of Lsi05G005590 vs. TAIR 10
Match:
AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 98.6 bits (244), Expect = 1.5e-20
Identity = 73/308 (23.70%), Postives = 138/308 (44.81%), Query Frame = 0
Query: 187 NSDVYSLLIDNFGRLDDYEGILPVLIEFRRKGIDLNHKAFGFLLVQLSDEDSIKISVERL 246
N Y+ LI+ + + E + V+ + + N + + L+ + K +V +
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI-----KGYCKSNVHKA 451
Query: 247 VKLLNEVGGSCRISGVM---ALIEMFCSLGSFGMAKFVIEITERRASF-----YNIIVRE 306
+ +LN++ + V+ +LI+ C G+F A ++ + R Y ++
Sbjct: 452 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 511
Query: 307 QCRRNDFEGARCTLDEMRQHGCSPDVGILNYLLSSLCKNDKFGEAHNLFEEMLERDCPPN 366
C+ E A D + Q G +P+V + L+ CK K EAH + E+ML ++C PN
Sbjct: 512 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 571
Query: 367 SLTFEVIICHLCEIGNIESALSFLDMMVSRGLEPRLSTHAAFVKSYFNSRRYEEAYRYAV 426
SLTF +I LC G ++ A + MV GL+P +ST + ++ AY
Sbjct: 572 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 631
Query: 427 DSSLKHAMAKNATYSLLATLHEKRGNLVDAQKILSELIDAGLRPNFPVYMRVLKKLQLQG 486
TY+ + + G L+DA+ +++++ + G+ P+ Y ++K G
Sbjct: 632 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 691
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SSR6 | 5.4e-23 | 25.38 | Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidop... | [more] |
O04504 | 1.6e-22 | 26.33 | Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX... | [more] |
Q3EDF8 | 1.3e-19 | 27.46 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
Q9FLJ4 | 1.6e-19 | 25.75 | Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana OX... | [more] |
Q9LSL9 | 2.1e-19 | 23.70 | Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1F148 | 7.1e-252 | 87.67 | pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like OS=Cuc... | [more] |
A0A6J1L3E8 | 2.3e-250 | 87.08 | pentatricopeptide repeat-containing protein At1g09820-like OS=Cucurbita maxima O... | [more] |
A0A6J1CJ38 | 1.7e-224 | 78.26 | pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like OS=Mom... | [more] |
A0A0A0L3E7 | 6.3e-224 | 80.04 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637180 PE=4 SV=1 | [more] |
A0A5D3D9T8 | 1.9e-220 | 79.28 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_022932243.1 | 1.5e-251 | 87.67 | pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like [Cucur... | [more] |
KAG7015541.1 | 4.3e-251 | 87.48 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_023007595.1 | 4.7e-250 | 87.08 | pentatricopeptide repeat-containing protein At1g09820-like [Cucurbita maxima] | [more] |
XP_038906259.1 | 1.7e-247 | 89.25 | pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like isofor... | [more] |
XP_023552923.1 | 1.7e-247 | 86.68 | pentatricopeptide repeat-containing protein At1g09820-like [Cucurbita pepo subsp... | [more] |
Match Name | E-value | Identity | Description | |
AT1G52640.1 | 3.9e-24 | 25.38 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G09820.1 | 1.1e-23 | 26.33 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G09900.1 | 8.9e-21 | 27.46 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT5G61400.1 | 1.2e-20 | 25.75 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G65560.1 | 1.5e-20 | 23.70 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |