Lsi05G005460 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G005460
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	heavy metal-associated isoprenylated plant protein 3-like
Location	chr05: 6785777 .. 6786650 (-)
RNA-Seq Expression	Lsi05G005460
Synteny	Lsi05G005460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATAATTCCACGAACATCCCAAGGGAGCTCCATTACTCTTTTCTAATTTCCCATGGCGCTGACCAAAACCGTTCTGAAACTTGACATTGCATGCCAAAAATGCAAAACCAAAGTCCTCAAAGCTGTTACTGCCATTGAAGGTACCTTCTTCTTCTTCTTCTTGATTGAATTACATGCACTTTTTTTTAAAAAAAAAAAAAAGAAAGAAAGAAAATTTGAATTTGTAAATTAATTTTGGTTGTAGGCGTGGACAAGGTCGAGACAGACGAAGCCAAGGGGACTTTGGCGGTGACGGGCACCGCGGATCCCTTCGACATAGTTAAACGTACGAGGAAGGCGATTGCTTGCGCCGGCAAGATTGTCGATGTCGTGAGCATTGGACCGCCACCCAAACCGGAAGAGAAGAAACCGGATGACAAAAAACCGGACGACAAGAAGGCGCCCGAAAAGAAGCCCGACCCCCCTCCGGTTTGTCCATGCCCGCCCTGCCCGCCTTATTATGGATCGTCCTACGTAATCGTACCTCGTGAAACCTATCCTTCTTGCTCTATTCTTTAATCGGAATACAAATTATTTGAGAATGGCAAATTTATTAATGTCGTTGTCTTGCGTCTCTATATCATTATTGGATATGTTTGTAAAATAATTTTAAATTTGTATTTTCTAAATCTTTTATCTTATCATTGTTAGATTAGAATTTAGAAGGCAGCTACGTTATTAAGACCATTTCATTTTGTGATTTTTTTAGTTTTATTTTGTAATTGGTACTAAATAATTAATGAAGAAAGGGCCAATTTTTTCTTCATTTTAATTTTATGGTCAAGTATTCAACTTCTATGCCGTGTTTCTAAATTATATTTTCTAATTAATGGC

mRNA sequence

ATATAATTCCACGAACATCCCAAGGGAGCTCCATTACTCTTTTCTAATTTCCCATGGCGCTGACCAAAACCGTTCTGAAACTTGACATTGCATGCCAAAAATGCAAAACCAAAGTCCTCAAAGCTGTTACTGCCATTGAAGGCGTGGACAAGGTCGAGACAGACGAAGCCAAGGGGACTTTGGCGGTGACGGGCACCGCGGATCCCTTCGACATAGTTAAACGTACGAGGAAGGCGATTGCTTGCGCCGGCAAGATTGTCGATGTCGTGAGCATTGGACCGCCACCCAAACCGGAAGAGAAGAAACCGGATGACAAAAAACCGGACGACAAGAAGGCGCCCGAAAAGAAGCCCGACCCCCCTCCGGTTTGTCCATGCCCGCCCTGCCCGCCTTATTATGGATCGTCCTACGTAATCGTACCTCGTGAAACCTATCCTTCTTGCTCTATTCTTTAATCGGAATACAAATTATTTGAGAATGGCAAATTTATTAATGTCGTTGTCTTGCGTCTCTATATCATTATTGGATATGTTTGTAAAATAATTTTAAATTTGTATTTTCTAAATCTTTTATCTTATCATTGTTAGATTAGAATTTAGAAGGCAGCTACGTTATTAAGACCATTTCATTTTGTGATTTTTTTAGTTTTATTTTGTAATTGGTACTAAATAATTAATGAAGAAAGGGCCAATTTTTTCTTCATTTTAATTTTATGGTCAAGTATTCAACTTCTATGCCGTGTTTCTAAATTATATTTTCTAATTAATGGC

Coding sequence (CDS)

ATGGCGCTGACCAAAACCGTTCTGAAACTTGACATTGCATGCCAAAAATGCAAAACCAAAGTCCTCAAAGCTGTTACTGCCATTGAAGGCGTGGACAAGGTCGAGACAGACGAAGCCAAGGGGACTTTGGCGGTGACGGGCACCGCGGATCCCTTCGACATAGTTAAACGTACGAGGAAGGCGATTGCTTGCGCCGGCAAGATTGTCGATGTCGTGAGCATTGGACCGCCACCCAAACCGGAAGAGAAGAAACCGGATGACAAAAAACCGGACGACAAGAAGGCGCCCGAAAAGAAGCCCGACCCCCCTCCGGTTTGTCCATGCCCGCCCTGCCCGCCTTATTATGGATCGTCCTACGTAATCGTACCTCGTGAAACCTATCCTTCTTGCTCTATTCTTTAA

Protein sequence

MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRKAIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPPVCPCPPCPPYYGSSYVIVPRETYPSCSIL

Homology

[Close]

BLAST of Lsi05G005460 vs. ExPASy Swiss-Prot
Match: Q9SFF7 (Heavy metal-associated isoprenylated plant protein 43 OS=Arabidopsis thaliana OX=3702 GN=HIPP43 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.8e-11
Identity = 54/136 (39.71%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 1   MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
           M + K  +K+DI C KC + +++AVT IEGV+ +  DE    L V GT DP  +  R +K
Sbjct: 1   MTVKKVEIKVDINCGKCNSAIMEAVTEIEGVNHISLDEGNSILTVVGTMDPVCVATRLKK 60

Query: 61  AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPPVCPCPPCPPYYGSSYV 120
                 K V ++S+GPPPKP    P+  KP + + P  KP P P  P   C P Y +S  
Sbjct: 61  ---IKQKPV-IISVGPPPKP----PEPPKPPEPEKP--KPPPAPEPPKHVCKPPYCNSCD 120

Query: 121 IVPRETYPS---CSIL 134
           +V   TY S   C+IL
Sbjct: 121 VVSVTTYESGSGCTIL 126

[Close]

BLAST of Lsi05G005460 vs. ExPASy Swiss-Prot
Match: Q9LTE3 (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09
Identity = 46/109 (42.20%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 7   VLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRKAIACAG 66
           VLKLD+ C+K K K +  V  + GV+ VE  +  G L VTG  D + IVK+ +K      
Sbjct: 5   VLKLDVHCEKTKQKAMSTVCCLSGVNSVEVKD--GKLTVTGEIDAYMIVKKLKKICH--- 64

Query: 67  KIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPPVCPCPPCPPYY 116
              + +S+GP      K+P+ KKPDD K PE KP        PPCPPYY
Sbjct: 65  --TEFISVGP-----VKEPEKKKPDDPKKPETKPPDVIYHYVPPCPPYY 101

[Close]

BLAST of Lsi05G005460 vs. ExPASy Swiss-Prot
Match: Q8GWS3 (Heavy metal-associated isoprenylated plant protein 2 OS=Arabidopsis thaliana OX=3702 GN=HIPP02 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.4e-09
Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 1  MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
          M   K  +K+DI C+KCK  +++AVT +EGV+ V  D+ K  L V GT DP  + ++ +K
Sbjct: 1  MTTKKIEIKVDIDCEKCKHAIMEAVTELEGVNIVSLDQEKSILTVVGTMDPVCVAEQLKK 60

Query: 61 AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAP 97
                K   V+S+GPP KP      D KPD KK P
Sbjct: 61 ----INKKPVVISVGPPKKP------DPKPDPKKDP 86

[Close]

BLAST of Lsi05G005460 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-05
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 3   LTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRKAI 62
           + K VLKLD+   + K K LK V+ + G+D +  D  +  L V GT DP ++V + RK  
Sbjct: 1   MKKIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRK-- 60

Query: 63  ACAGKIVDVVSIGPPPKPE-EKKPDDKKPDDKKAPEKKPDPP 104
                + D+V +GP  +PE EKK + KK    + P+K+ + P
Sbjct: 61  --YWPMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAP 98

[Close]

BLAST of Lsi05G005460 vs. ExPASy Swiss-Prot
Match: Q9FJH5 (Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana OX=3702 GN=HIPP03 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.8e-05
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 7   VLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRKAIACAG 66
           VLK+D+ C+ C ++++K V + +GV+ V+++ A G L VTG  DP   VK   K      
Sbjct: 29  VLKVDMHCEGCASRIVKCVRSFQGVETVKSESATGKLTVTGALDP---VKLREKLEEKTK 88

Query: 67  KIVDVVSIGPPPKPEEKK-------PDDKKPDDKKAP---EKKPDPPPV 106
           K VD+VS  P PK E++K        D KK ++KK P   +KKP   PV
Sbjct: 89  KKVDLVS--PQPKKEKEKENKNKNDEDKKKSEEKKKPDNNDKKPKETPV 132

[Close]

BLAST of Lsi05G005460 vs. ExPASy TrEMBL
Match: A0A0A0KJ75 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504410 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.6e-54
Identity = 116/135 (85.93%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
           MA+TKTV+KLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAV GTADPF+IVKRTRK
Sbjct: 1   MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60

Query: 61  AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPPVCPCP--PCPPYYGSS 120
           AIACAGK+ DVVSIGPPPKP+EKKP++KK ++KK  +KKPDPPP CPCP  PCPPYYGSS
Sbjct: 61  AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPP-CPCPPYPCPPYYGSS 120

Query: 121 YVIVPRETYPSCSIL 134
           YVIVP ETYPSCSIL
Sbjct: 121 YVIVPHETYPSCSIL 134

[Close]

BLAST of Lsi05G005460 vs. ExPASy TrEMBL
Match: A0A1S3B1X1 (heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo OX=3656 GN=LOC103485075 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.8e-53
Identity = 121/136 (88.97%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 1   MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
           MA TKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPF+IVKRTRK
Sbjct: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFEIVKRTRK 60

Query: 61  AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKK-APEKKPDPPPVCPCPP--CPPYYGS 120
           AIACAGKI DVVSIGPPPKP EKKPD+KK  DKK A  KKP+PPP CPCPP  CPPYYGS
Sbjct: 61  AIACAGKIADVVSIGPPPKPGEKKPDEKKEGDKKPADPKKPEPPP-CPCPPYHCPPYYGS 120

Query: 121 SYVIVPRETYPSCSIL 134
           SYVIVPRETYP CSIL
Sbjct: 121 SYVIVPRETYPPCSIL 135

[Close]

BLAST of Lsi05G005460 vs. ExPASy TrEMBL
Match: A0A6J1GFG8 (heavy metal-associated isoprenylated plant protein 43-like OS=Cucurbita moschata OX=3662 GN=LOC111453697 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.5e-42
Identity = 96/133 (72.18%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 1   MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
           MA+TKT+LKLDI C KCKTKVLKAVTA+EGVDK+E DEAKGTLAVTGTADP+DIV RTRK
Sbjct: 1   MAMTKTILKLDITCHKCKTKVLKAVTALEGVDKIEMDEAKGTLAVTGTADPYDIVTRTRK 60

Query: 61  AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPPVCPCPPCPPYYGSSYV 120
           AI+CAGKI D+ +IGPPPKP        KP  + +    P PPP CPCP  PPYYGSSYV
Sbjct: 61  AISCAGKIADIDTIGPPPKPN----PPPKPTPQPSCSCPPFPPPYCPCPSYPPYYGSSYV 120

Query: 121 IVPRETYPSCSIL 134
           +VP ETYPSCSIL
Sbjct: 121 VVPHETYPSCSIL 129

[Close]

BLAST of Lsi05G005460 vs. ExPASy TrEMBL
Match: A0A6J1HG22 (heavy metal-associated isoprenylated plant protein 43-like OS=Cucurbita moschata OX=3662 GN=LOC111463168 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.8e-40
Identity = 96/134 (71.64%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 1   MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
           MA+ KTVLKLDI+CQKCKTKVLKAVT++E VDKVETDEAKGT+ V G ADP+ IVK TRK
Sbjct: 1   MAMIKTVLKLDISCQKCKTKVLKAVTSLEDVDKVETDEAKGTIGVIGKADPYKIVKITRK 60

Query: 61  AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPP-VCPCPPCPPYYGSSY 120
           A++ AGK+V+VVSIGPPPKP+EKKP++KKPD      KKPD  P +C CPP PP YGSSY
Sbjct: 61  AVSSAGKVVEVVSIGPPPKPDEKKPEEKKPDG-----KKPDSVPCICTCPPYPP-YGSSY 120

Query: 121 VIVPRETYPSCSIL 134
           ++VP ET PSCSIL
Sbjct: 121 IVVPHETQPSCSIL 128

[Close]

BLAST of Lsi05G005460 vs. ExPASy TrEMBL
Match: A0A6J1BT00 (heavy metal-associated isoprenylated plant protein 43-like OS=Momordica charantia OX=3673 GN=LOC111005489 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.3e-40
Identity = 101/137 (73.72%), Postives = 113/137 (82.48%), Query Frame = 0


Query: 1   MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
           MA  KTVLK+DIACQKCKTKVLKAVT IEGVDK+ETDEAKGT+AVTGTADP+DI+ R RK
Sbjct: 1   MAQIKTVLKIDIACQKCKTKVLKAVT-IEGVDKIETDEAKGTVAVTGTADPYDIIVRARK 60

Query: 61  AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPPVCPCP-PCPPYYGSSY 120
           AI+CAGK  +VVSIGPPPKP++K   +KKPDDK   +KKP PP  CPCP PCPP Y  SY
Sbjct: 61  AISCAGKYAEVVSIGPPPKPDDK---EKKPDDK---DKKPPPP--CPCPYPCPPNYCPSY 120

Query: 121 ---VIVPRETYPSCSIL 134
              V+VPRETYP CSIL
Sbjct: 121 GYAVVVPRETYPPCSIL 128

[Close]

BLAST of Lsi05G005460 vs. NCBI nr
Match: KGN48859.1 (hypothetical protein Csa_003365 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 7.5e-54
Identity = 116/135 (85.93%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
           MA+TKTV+KLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAV GTADPF+IVKRTRK
Sbjct: 1   MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60

Query: 61  AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPPVCPCP--PCPPYYGSS 120
           AIACAGK+ DVVSIGPPPKP+EKKP++KK ++KK  +KKPDPPP CPCP  PCPPYYGSS
Sbjct: 61  AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPP-CPCPPYPCPPYYGSS 120

Query: 121 YVIVPRETYPSCSIL 134
           YVIVP ETYPSCSIL
Sbjct: 121 YVIVPHETYPSCSIL 134

[Close]

BLAST of Lsi05G005460 vs. NCBI nr
Match: XP_004149991.2 (uncharacterized protein LOC101205995 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 7.5e-54
Identity = 116/135 (85.93%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
           MA+TKTV+KLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAV GTADPF+IVKRTRK
Sbjct: 1   MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60

Query: 61  AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPPVCPCP--PCPPYYGSS 120
           AIACAGK+ DVVSIGPPPKP+EKKP++KK ++KK  +KKPDPPP CPCP  PCPPYYGSS
Sbjct: 61  AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPDPPP-CPCPPYPCPPYYGSS 120

Query: 121 YVIVPRETYPSCSIL 134
           YVIVP ETYPSCSIL
Sbjct: 121 YVIVPHETYPSCSIL 134

[Close]

BLAST of Lsi05G005460 vs. NCBI nr
Match: XP_008440757.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Cucumis melo])

HSP 1 Score: 218.4 bits (555), Expect = 3.7e-53
Identity = 121/136 (88.97%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 1   MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
           MA TKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPF+IVKRTRK
Sbjct: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFEIVKRTRK 60

Query: 61  AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKK-APEKKPDPPPVCPCPP--CPPYYGS 120
           AIACAGKI DVVSIGPPPKP EKKPD+KK  DKK A  KKP+PPP CPCPP  CPPYYGS
Sbjct: 61  AIACAGKIADVVSIGPPPKPGEKKPDEKKEGDKKPADPKKPEPPP-CPCPPYHCPPYYGS 120

Query: 121 SYVIVPRETYPSCSIL 134
           SYVIVPRETYP CSIL
Sbjct: 121 SYVIVPRETYPPCSIL 135

[Close]

BLAST of Lsi05G005460 vs. NCBI nr
Match: XP_038877711.1 (heavy metal-associated isoprenylated plant protein 43-like [Benincasa hispida])

HSP 1 Score: 205.3 bits (521), Expect = 3.3e-49
Identity = 115/134 (85.82%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 1   MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
           MA TKTVLKLDIACQKCKTKVLKAVT+IEGVDKVETDEAKGTL+VTGTADP DIVKRTRK
Sbjct: 1   MAQTKTVLKLDIACQKCKTKVLKAVTSIEGVDKVETDEAKGTLSVTGTADPVDIVKRTRK 60

Query: 61  AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPPV-CPCPPCPPYYGSSY 120
           AI+CAGKIVDVVSIGPPPKPEEKKPDDKKPDD     KKP PPP  CPCPP PPY G SY
Sbjct: 61  AISCAGKIVDVVSIGPPPKPEEKKPDDKKPDD-----KKPAPPPCPCPCPPYPPYSG-SY 120

Query: 121 VIVPRETYPSCSIL 134
           V+VP ET PSCSIL
Sbjct: 121 VVVPCETNPSCSIL 128

[Close]

BLAST of Lsi05G005460 vs. NCBI nr
Match: KAG7034127.1 (Heavy metal-associated isoprenylated plant protein 43, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183.0 bits (463), Expect = 1.7e-42
Identity = 97/133 (72.93%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 1   MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
           MA+TKT+LKLDIAC KCKTKVLKAVTA+EGVDK+E DEAKGTLAVTGTADP+DIV RTRK
Sbjct: 1   MAMTKTILKLDIACHKCKTKVLKAVTALEGVDKIEMDEAKGTLAVTGTADPYDIVTRTRK 60

Query: 61  AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPPVCPCPPCPPYYGSSYV 120
           AI+CAGKI D+ +IGPPPKP        KP  + +    P PPP CPCP  PPYYGSSYV
Sbjct: 61  AISCAGKIADIDTIGPPPKPN----PPPKPTPQPSCSCPPCPPPYCPCPSYPPYYGSSYV 120

Query: 121 IVPRETYPSCSIL 134
           +VP ETYPSCSIL
Sbjct: 121 VVPHETYPSCSIL 129

[Close]

BLAST of Lsi05G005460 vs. TAIR 10
Match: AT3G05920.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 3.4e-12
Identity = 54/136 (39.71%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 1   MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
           M + K  +K+DI C KC + +++AVT IEGV+ +  DE    L V GT DP  +  R +K
Sbjct: 1   MTVKKVEIKVDINCGKCNSAIMEAVTEIEGVNHISLDEGNSILTVVGTMDPVCVATRLKK 60

Query: 61  AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPPVCPCPPCPPYYGSSYV 120
                 K V ++S+GPPPKP    P+  KP + + P  KP P P  P   C P Y +S  
Sbjct: 61  ---IKQKPV-IISVGPPPKP----PEPPKPPEPEKP--KPPPAPEPPKHVCKPPYCNSCD 120

Query: 121 IVPRETYPS---CSIL 134
           +V   TY S   C+IL
Sbjct: 121 VVSVTTYESGSGCTIL 126

[Close]

BLAST of Lsi05G005460 vs. TAIR 10
Match: AT5G52740.1 (Copper transport protein family )

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 46/109 (42.20%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 7   VLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRKAIACAG 66
           VLKLD+ C+K K K +  V  + GV+ VE  +  G L VTG  D + IVK+ +K      
Sbjct: 5   VLKLDVHCEKTKQKAMSTVCCLSGVNSVEVKD--GKLTVTGEIDAYMIVKKLKKICH--- 64

Query: 67  KIVDVVSIGPPPKPEEKKPDDKKPDDKKAPEKKPDPPPVCPCPPCPPYY 116
              + +S+GP      K+P+ KKPDD K PE KP        PPCPPYY
Sbjct: 65  --TEFISVGP-----VKEPEKKKPDDPKKPETKPPDVIYHYVPPCPPYY 101

[Close]

BLAST of Lsi05G005460 vs. TAIR 10
Match: AT5G26690.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-10
Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 1  MALTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRK 60
          M   K  +K+DI C+KCK  +++AVT +EGV+ V  D+ K  L V GT DP  + ++ +K
Sbjct: 1  MTTKKIEIKVDIDCEKCKHAIMEAVTELEGVNIVSLDQEKSILTVVGTMDPVCVAEQLKK 60

Query: 61 AIACAGKIVDVVSIGPPPKPEEKKPDDKKPDDKKAP 97
                K   V+S+GPP KP      D KPD KK P
Sbjct: 61 ----INKKPVVISVGPPKKP------DPKPDPKKDP 86

[Close]

BLAST of Lsi05G005460 vs. TAIR 10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 9.6e-07
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 3   LTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRKAI 62
           + K VLKLD+   + K K LK V+ + G+D +  D  +  L V GT DP ++V + RK  
Sbjct: 1   MKKIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRK-- 60

Query: 63  ACAGKIVDVVSIGPPPKPE-EKKPDDKKPDDKKAPEKKPDPP 104
                + D+V +GP  +PE EKK + KK    + P+K+ + P
Sbjct: 61  --YWPMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAP 98

[Close]

BLAST of Lsi05G005460 vs. TAIR 10
Match: AT1G01490.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 9.6e-07
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 3   LTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFDIVKRTRKAI 62
           + K VLKLD+   + K K LK V+ + G+D +  D  +  L V GT DP ++V + RK  
Sbjct: 1   MKKIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRK-- 60

Query: 63  ACAGKIVDVVSIGPPPKPE-EKKPDDKKPDDKKAPEKKPDPP 104
                + D+V +GP  +PE EKK + KK    + P+K+ + P
Sbjct: 61  --YWPMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAP 98

The following BLAST results are available for this feature:

BLAST of Lsi05G005460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFF7	4.8e-11	39.71	Heavy metal-associated isoprenylated plant protein 43 OS=Arabidopsis thaliana OX...	[more]
Q9LTE3	1.5e-09	42.20	Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX...	[more]
Q8GWS3	3.4e-09	41.67	Heavy metal-associated isoprenylated plant protein 2 OS=Arabidopsis thaliana OX=...	[more]
O03982	1.4e-05	36.27	Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX...	[more]
Q9FJH5	1.8e-05	39.45	Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Lsi05G005460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ75	3.6e-54	85.93	HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504410 PE=4 SV...	[more]
A0A1S3B1X1	1.8e-53	88.97	heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo OX=365...	[more]
A0A6J1GFG8	2.5e-42	72.18	heavy metal-associated isoprenylated plant protein 43-like OS=Cucurbita moschata...	[more]
A0A6J1HG22	1.8e-40	71.64	heavy metal-associated isoprenylated plant protein 43-like OS=Cucurbita moschata...	[more]
A0A6J1BT00	2.3e-40	73.72	heavy metal-associated isoprenylated plant protein 43-like OS=Momordica charanti...	[more]

BLAST of Lsi05G005460 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48859.1	7.5e-54	85.93	hypothetical protein Csa_003365 [Cucumis sativus]	[more]
XP_004149991.2	7.5e-54	85.93	uncharacterized protein LOC101205995 [Cucumis sativus]	[more]
XP_008440757.1	3.7e-53	88.97	PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Cucumis me...	[more]
XP_038877711.1	3.3e-49	85.82	heavy metal-associated isoprenylated plant protein 43-like [Benincasa hispida]	[more]
KAG7034127.1	1.7e-42	72.93	Heavy metal-associated isoprenylated plant protein 43, partial [Cucurbita argyro...	[more]

BLAST of Lsi05G005460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05920.1	3.4e-12	39.71	Heavy metal transport/detoxification superfamily protein	[more]
AT5G52740.1	1.1e-10	42.20	Copper transport protein family	[more]
AT5G26690.1	2.4e-10	41.67	Heavy metal transport/detoxification superfamily protein	[more]
AT1G01490.1	9.6e-07	36.27	Heavy metal transport/detoxification superfamily protein	[more]
AT1G01490.2	9.6e-07	36.27	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 11..62 e-value: 8.0E-10 score: 39.0
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 14..67 e-value: 0.00554975 score: 31.4221
None	No IPR available	GENE3D	3.30.70.100		coord: 2..76 e-value: 4.0E-15 score: 57.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..106
None	No IPR available	PANTHER	PTHR45811:SF13	OS04G0661100 PROTEIN	coord: 4..132
None	No IPR available	PANTHER	PTHR45811	COPPER TRANSPORT PROTEIN FAMILY-RELATED	coord: 4..132
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 3..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G005460.1	Lsi05G005460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding