Lsi05G005330 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G005330
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pectin lyase-like superfamily protein, putative
Location	chr05: 6663586 .. 6665958 (+)
RNA-Seq Expression	Lsi05G005330
Synteny	Lsi05G005330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATTTGGTGCCAAACCTGATGCAATTACGGATAATAGTAAGGTAAAAAATTTTATTTTCAATATAAAACCACAAATACTTTAAAATTCAATTCTAATAAAAAAAAATTTAATAGTTTTCAATATTTATACCTATGACATATTTTGTGGTAATTTATAAAATTAGTGACAACAAAAATTGATATTTAGTGATAATTTGATAACGTTTTTGTTTCTTGTTTTAAAGTTTTTTAGAAACAAAATCATTAGAAGCACTAATACGTGTTAATATAGGTATGTATGATTTTTTTTGGTTTCGTGTTTTTTTTTTTTTTTCAGAAATATCTTTTCAAAAGTGATGTAAAAGTTTTGGAAACTAAAAAATTGAAGTTTCTTAGGGGTCGGTTTGATATTTGACATTAGGATTTCATATCTTTGCATTCAAATGTTTGAATTTGGAGCCAAATTTAGTTTTTTATTTCTAGTTTTTGAAAATTATAGGGTTATTTTTATTACGTTTTCATCTTTCTCAAAAAAAACATATAAATTCATAGTTAAATTCTAAAAAACCAAAATAAAAATTTTAAAACTACCTTTTTAAATTTTTAAAACTTGACTTGTACTTTGAAATCCATCATGCCTAGTTGATTAAAAAAGACAAATAAATCCTAGGTAGAAGTAATTATTATTATTATAAAAAGTACATTATCAAACCAGCTCTAATTTCTTTCATCATCTAAGAGACTAAGACACGTCAACATATACTAGGCACTCATGGTACATAATATACTTTTGTTTTCATTTCTTTTTAGTTTGAAAATAAAATTTATATATATATAAAAATGAATTTCAATGATCCTTCACTTTCTAAATGAGTTTTGTTAAATAGTTAAATTCAAAAACAAAGAAAAAATTATTCTAAAAACTATTAAATTGGAAATTTTAAGCTATCATTTCGTTGAAAGATGATGATTATAAAAGGTTAATGAGTTTATTTGTATAATAGGCATTAAGTATGGCATGGAGCCAAGCTTGTGGAAATAATGGAGGTGGTGTAGTTTTAATACCAGCCCAAGGAAGGTTCTTAGTTTTGCCATTGCTGCTTCAAGGTCCATGCCATGGCTTCATTCGTATACAACTTGATGGCGAATTGTTGGCTCCTGCCGATAAGCATTTCGCCATCGGCAACTACTGGCTTAGTATCAACCAAGTGAACAACTTGTTCATCGATGGTTTGGGTCGCTTGAACGGCCGTGGCTCGACCGCTTGGCCTTACAACTCCGCTAACCGTCCCATCGTAAGCTCATCTCTTTTCCTTTCTTTCTCACTAACAATAAGCCTAACATTTGTTTAAAGTAAATAACTCAGTTTCCGAGTATTTGTTTCTATTGCAATTTCTATATTTTAAGTTTTTTTCTTAATTTTTAAAAAAGTTATTTGTTATGTTGACAATGAAATGCTTATATGACTGCTTTCTACACTTATTTTAAATGCAACTCCATAACGTACTTGTTGCAAACTAATGATTTGATATTATTTTCTGTAGTCTATGAAACTTAATAATATCAACACTGCGAGAATCAGGAACATAAAATCCTACAATAGCAAACTCTTCCATTTCGCTGTGCATGGATGTCATGACGTCACATTCGATCACGTTACAATAATAGCTCCAGCAGACAGTCCCAACACAGATGGAATCCACATTTCATCATCGAGTGGTATCAACATCATGCATTCAGTGATTGGCACGGGAGACGACTGCATCTCCTTAGGTCCTGGAAGCAAATTCATCAACATAACCAACGTCCAATGTGGTCCTGGCCATGGAATTAGCATCGGTAGCCTTGGAAAGTATCCAAACGAAGAAGACGTCTTCGAAGTCACAGTAAGAGACTCCACGTTCGTTGACACATCCAATGGTGTTAGGATCAAATCATGGTCGTCTTCGTATTCCAACATGGTTAGCAAAATCGTATATCTCAATCTCCAAATGAACAATGTCAAAAATCCTATCATCATAGATCAAGAGTATTGTCCTGACTCTTGCACTCCAAATGAAATGGTAAATGAAAGATAATTTGAGAGCATTATGGTTTTAGCAAATGGTATATATAAAAATATATATATGATTCTAAAGCAAATGTGGTTTTGTGGTTGGCAGATGAGTAAATCAAGAGTGGAAATTAAAGATGTGAGATATGAAGGAATAAAGGGGAGTTCAAATACACAAGTGGCAGTAGATTTTGAATGCAGCCAAGTTTTTCCATGTCAAGGCATAGTATTGCAAGACATTAACCTTCGTTTCAATGGTGGTGGCCAAGCAACTTCCATTTGTCATAATGTTAGAGGTTCTGCTTTTGGCAAACAATTACCTTCCTCTTGCCTTTAA

mRNA sequence

ATGCAATTTGGTGCCAAACCTGATGCAATTACGGATAATAGTAAGGCATTAAGTATGGCATGGAGCCAAGCTTGTGGAAATAATGGAGGTGGTGTAGTTTTAATACCAGCCCAAGGAAGGTTCTTAGTTTTGCCATTGCTGCTTCAAGGTCCATGCCATGGCTTCATTCGTATACAACTTGATGGCGAATTGTTGGCTCCTGCCGATAAGCATTTCGCCATCGGCAACTACTGGCTTAGTATCAACCAAGTGAACAACTTGTTCATCGATGGTTTGGGTCGCTTGAACGGCCGTGGCTCGACCGCTTGGCCTTACAACTCCGCTAACCGTCCCATCTCTATGAAACTTAATAATATCAACACTGCGAGAATCAGGAACATAAAATCCTACAATAGCAAACTCTTCCATTTCGCTGTGCATGGATGTCATGACGTCACATTCGATCACGTTACAATAATAGCTCCAGCAGACAGTCCCAACACAGATGGAATCCACATTTCATCATCGAGTGGTATCAACATCATGCATTCAGTGATTGGCACGGGAGACGACTGCATCTCCTTAGGTCCTGGAAGCAAATTCATCAACATAACCAACGTCCAATGTGGTCCTGGCCATGGAATTAGCATCGGTAGCCTTGGAAAGTATCCAAACGAAGAAGACGTCTTCGAAGTCACAGTAAGAGACTCCACGTTCGTTGACACATCCAATGGTGTTAGGATCAAATCATGGTCGTCTTCGTATTCCAACATGGTTAGCAAAATCGTATATCTCAATCTCCAAATGAACAATGTCAAAAATCCTATCATCATAGATCAAGAGTATTGTCCTGACTCTTGCACTCCAAATGAAATGATGAGTAAATCAAGAGTGGAAATTAAAGATGTGAGATATGAAGGAATAAAGGGGAGTTCAAATACACAAGTGGCAGTAGATTTTGAATGCAGCCAAGTTTTTCCATGTCAAGGCATAGTATTGCAAGACATTAACCTTCGTTTCAATGGTGGTGGCCAAGCAACTTCCATTTGTCATAATGTTAGAGGTTCTGCTTTTGGCAAACAATTACCTTCCTCTTGCCTTTAA

Coding sequence (CDS)

ATGCAATTTGGTGCCAAACCTGATGCAATTACGGATAATAGTAAGGCATTAAGTATGGCATGGAGCCAAGCTTGTGGAAATAATGGAGGTGGTGTAGTTTTAATACCAGCCCAAGGAAGGTTCTTAGTTTTGCCATTGCTGCTTCAAGGTCCATGCCATGGCTTCATTCGTATACAACTTGATGGCGAATTGTTGGCTCCTGCCGATAAGCATTTCGCCATCGGCAACTACTGGCTTAGTATCAACCAAGTGAACAACTTGTTCATCGATGGTTTGGGTCGCTTGAACGGCCGTGGCTCGACCGCTTGGCCTTACAACTCCGCTAACCGTCCCATCTCTATGAAACTTAATAATATCAACACTGCGAGAATCAGGAACATAAAATCCTACAATAGCAAACTCTTCCATTTCGCTGTGCATGGATGTCATGACGTCACATTCGATCACGTTACAATAATAGCTCCAGCAGACAGTCCCAACACAGATGGAATCCACATTTCATCATCGAGTGGTATCAACATCATGCATTCAGTGATTGGCACGGGAGACGACTGCATCTCCTTAGGTCCTGGAAGCAAATTCATCAACATAACCAACGTCCAATGTGGTCCTGGCCATGGAATTAGCATCGGTAGCCTTGGAAAGTATCCAAACGAAGAAGACGTCTTCGAAGTCACAGTAAGAGACTCCACGTTCGTTGACACATCCAATGGTGTTAGGATCAAATCATGGTCGTCTTCGTATTCCAACATGGTTAGCAAAATCGTATATCTCAATCTCCAAATGAACAATGTCAAAAATCCTATCATCATAGATCAAGAGTATTGTCCTGACTCTTGCACTCCAAATGAAATGATGAGTAAATCAAGAGTGGAAATTAAAGATGTGAGATATGAAGGAATAAAGGGGAGTTCAAATACACAAGTGGCAGTAGATTTTGAATGCAGCCAAGTTTTTCCATGTCAAGGCATAGTATTGCAAGACATTAACCTTCGTTTCAATGGTGGTGGCCAAGCAACTTCCATTTGTCATAATGTTAGAGGTTCTGCTTTTGGCAAACAATTACCTTCCTCTTGCCTTTAA

Protein sequence

MQFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQLDGELLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANRPISMKLNNINTARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMHSVIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTSNGVRIKSWSSSYSNMVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKDVRYEGIKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNGGGQATSICHNVRGSAFGKQLPSSCL

Homology

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BLAST of Lsi05G005330 vs. ExPASy Swiss-Prot
Match: P35339 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 9.7e-83
Identity = 159/362 (43.92%), Postives = 228/362 (62.98%), Query Frame = 0


Query: 2   QFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQLD 61
           + GA  +  TD++KA+  AW+ ACG  G   +LIP +G FLV PL   GPC G + IQ++
Sbjct: 45  KLGASGNGKTDSTKAVQEAWASACGGTGKQTILIP-KGDFLVGPLNFTGPCKGDVTIQVN 104

Query: 62  GELLAPAD-KHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANR-------PIS 121
           G LLA  D   +     W+ I +V+NL I G G+L+G+G   W  NS  +       P S
Sbjct: 105 GNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNS 164

Query: 122 MKLNNINTARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGIN 181
           + ++ +N   +  I   NSK FH  ++ C D+    V + AP DSPNTDGIH+  SSG+ 
Sbjct: 165 LVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVT 224

Query: 182 IMHSVIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFV 241
           I ++VIG GDDCIS+GPG+  +NIT V CGPGHGISIGSLG+Y +E+DV ++ V+D T  
Sbjct: 225 ITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLK 284

Query: 242 DTSNGVRIKSWSSSYSNM-VSKIVYLNLQMNNVKNPIIIDQEYCPDS-CTPNEMMSKSRV 301
            T+NGVRIK++  + S +  SKI Y N++M +   PIIID +YCP+  CT N     S+V
Sbjct: 285 KTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTAN---GASKV 344

Query: 302 EIKDVRYEGIKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNGGGQAT-SICHNVRGSA 353
            +KDV ++ I G+S+T  AV+  C+   PC G+ + D+N++++G    T ++C N +GSA
Sbjct: 345 TVKDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSA 402

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BLAST of Lsi05G005330 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.2e-82
Identity = 157/365 (43.01%), Postives = 231/365 (63.29%), Query Frame = 0


Query: 3   FGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGF-IRIQLD 62
           +GAK     D S+A+  AW  AC + G   VLIP +G + +  + +QGPC G  I  Q+D
Sbjct: 15  YGAK--GAGDISQAVMKAWKAACASQGPSTVLIP-KGNYNMGEVAMQGPCKGSKIGFQID 74

Query: 63  GELLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANR-------PISM 122
           G + APAD      + W+S  +++ L + G G L+G+G TAW  N+ ++        +++
Sbjct: 75  GVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHAAMNL 134

Query: 123 KLNNINTARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINI 182
           + + +  A +R+I S NSK+FH  V  C D+TF HVT+ AP  S NTDGIH+  S G+ I
Sbjct: 135 RFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTI 194

Query: 183 MHSVIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVD 242
            ++ I TGDDCIS+GPGS+ + IT V CGPGHGISIGSLG+Y NE++V  +TV+  TF  
Sbjct: 195 TNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSG 254

Query: 243 TSNGVRIKSWSSSYSNMVSKIVYLNLQMNNVKNPIIIDQEYCP-DSCTPNEMMSKSRVEI 302
           T NGVR+K+W +S     + + + +L MNNV+NP+I+DQEYCP   C+     + SR+++
Sbjct: 255 TMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCS---RQAPSRIKL 314

Query: 303 KDVRYEGIKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNG-GGQATSICHNVRGSAFG 358
            ++ +  I+G+S  +VAV   CS   PC  + + +INL + G GG ATS C NV+ +  G
Sbjct: 315 SNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTFSG 373

[Close]

BLAST of Lsi05G005330 vs. ExPASy Swiss-Prot
Match: P26216 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 8.2e-82
Identity = 160/362 (44.20%), Postives = 223/362 (61.60%), Query Frame = 0


Query: 2   QFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQLD 61
           + GA  +  TD++KA+  AW+ ACG  G   +LIP +G FLV  L   GPC G + IQ+D
Sbjct: 45  KLGASGNGKTDSTKAVQEAWASACGGTGKQTILIP-KGDFLVGQLNFTGPCKGDVTIQVD 104

Query: 62  GELLAPAD-KHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANR-------PIS 121
           G LLA  D   +     W+ I +V+NL I G G L+G+G   W  NS  +       P S
Sbjct: 105 GNLLATTDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNS 164

Query: 122 MKLNNINTARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGIN 181
           + ++ +N   +  +   NSK FH  ++ C D+    VT+ AP DSPNTDGIH+  SSGI 
Sbjct: 165 LVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGIT 224

Query: 182 IMHSVIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFV 241
           I ++VIG GDDCIS+GPG+  +NIT V CGPGHGISIGSLG+Y +E+DV ++ V+D T  
Sbjct: 225 ITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLK 284

Query: 242 DTSNGVRIKSWSSSYSNM-VSKIVYLNLQMNNVKNPIIIDQEYCPDS-CTPNEMMSKSRV 301
            T  GVRIK++  + S + VSKI Y N++M +  NPI ID +YCP+  CT N     S+V
Sbjct: 285 KTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTAN---GASKV 344

Query: 302 EIKDVRYEGIKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNGGGQAT-SICHNVRGSA 353
            +KDV ++ I G+S+T  AV   C+   PC G+ + D+N+ ++G    T +IC N +GS 
Sbjct: 345 TVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGST 402

[Close]

BLAST of Lsi05G005330 vs. ExPASy Swiss-Prot
Match: P35338 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.2e-80
Identity = 158/362 (43.65%), Postives = 222/362 (61.33%), Query Frame = 0


Query: 2   QFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQLD 61
           + GA  +  TD++KA+  AW+ ACG  G   +LIP +G FLV  L   GPC G + IQ+D
Sbjct: 45  KLGASGNGKTDSTKAVQEAWASACGGTGKQTILIP-KGDFLVGQLNFTGPCKGDVTIQVD 104

Query: 62  GELLAPAD-KHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANR-------PIS 121
           G LLA  D   +     W+ I +V+NL I G G L+G+G   W  NS  +       P S
Sbjct: 105 GNLLATTDLSQYKEHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNS 164

Query: 122 MKLNNINTARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGIN 181
           + ++ +N   +  +   NSK FH  ++ C ++    VT+ AP DSPNTDGIH+  SSGI 
Sbjct: 165 LVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGIT 224

Query: 182 IMHSVIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFV 241
           I ++VIG GDDCIS+GPG+  +NIT V CGPGHGISIGSLG+Y +E+DV ++ V+D T  
Sbjct: 225 ITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLK 284

Query: 242 DTSNGVRIKSWSSSYSNM-VSKIVYLNLQMNNVKNPIIIDQEYCPDS-CTPNEMMSKSRV 301
            T  GVRIK++  + S + VSKI Y N++M +  NPI ID +YCP+  CT N     S+V
Sbjct: 285 KTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTAN---GASKV 344

Query: 302 EIKDVRYEGIKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNGGGQAT-SICHNVRGSA 353
            +KDV ++ I G+S+T  A+   C+   PC G  + D+N+ ++G    T +IC N +GS 
Sbjct: 345 TVKDVTFKNITGTSSTPEAISLLCTAKVPCTGATMDDVNVEYSGTNNKTMAICTNAKGST 402

[Close]

BLAST of Lsi05G005330 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.7e-80
Identity = 156/358 (43.58%), Postives = 228/358 (63.69%), Query Frame = 0


Query: 12  DNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQLDGELLAPADKH 71
           D+++AL+ AW +AC +     +L+P +G F V  + L+GPC   I +QL G L APAD  
Sbjct: 1   DSTQALTTAWKEACASASPSTILVP-KGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPS 60

Query: 72  FAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSA--NRPI------SMKLNNINTAR 131
              G  W+++N+++ L I G G  +G+G +AW  N    N PI      +++L  +  + 
Sbjct: 61  KIKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSI 120

Query: 132 IRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMHSVIGTGD 191
           +R++ + +SK FH  V GC ++TF+   I A   S NTDGIHI  S G+NI+++ I TGD
Sbjct: 121 LRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGD 180

Query: 192 DCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTSNGVRIKS 251
           DCISLG GSK INITN+ CGPGHGIS+GSLG+Y NEE V  + V++ T   + NGVRIK+
Sbjct: 181 DCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKT 240

Query: 252 WSSSYSNMVSKIVYLNLQMNNVKNPIIIDQEYCP-DSCTPNEMMSKSRVEIKDVRYEGIK 311
           W  S     S++ + ++ MN+V  PI+IDQ YCP + CT       S V++  + ++ IK
Sbjct: 241 WPKSEPGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAE---VPSSVKLSKISFKNIK 300

Query: 312 GSSNTQVAVDFECSQVFPCQGIVLQDINLRFNG-GGQATSICHNVRGSAFGKQLPSSC 360
           G+S T+ AV   CS+ FPC G+ L DI+L ++G GG ATS+C N++ +  GKQ+P+ C
Sbjct: 301 GTSTTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAIC 354

[Close]

BLAST of Lsi05G005330 vs. ExPASy TrEMBL
Match: A0A0A0L7H9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063610 PE=3 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.5e-182
Identity = 309/360 (85.83%), Postives = 332/360 (92.22%), Query Frame = 0


Query: 1   MQFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQL 60
           M FGAKPDAITDNSKALS AWS+AC NNGGG+VLIPA+GRFLVLPLLLQGPCHGFIRIQL
Sbjct: 1   MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQL 60

Query: 61  DGELLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANRPISMKLNNIN 120
           DGELLAP D+HFA G+YWLSI+QVNNLFIDGLG L+GRGSTAWP  S NRP+SM+LN IN
Sbjct: 61  DGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTAWPSTSHNRPVSMRLNGIN 120

Query: 121 TARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMHSVIG 180
            ARI NIKSYNSKLFHFA+HGC DVTFDHVT+IAPA+SPNTDGIHISSSSGINIMHS IG
Sbjct: 121 NARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIG 180

Query: 181 TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTSNGVR 240
           TGDDCISLGPGSKFINITN+QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF+ TSNGVR
Sbjct: 181 TGDDCISLGPGSKFINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVR 240

Query: 241 IKSWSSSYSNMVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKDVRYEG 300
           IK+WSSSYS+MVSK+ +LNLQMNNVKNPIIIDQ YCP SC   +MMSKS V+IKDVRYEG
Sbjct: 241 IKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMMSKSMVQIKDVRYEG 300

Query: 301 IKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNGGGQATSICHNVRGSAFGKQLPSSCL 360
           I+GSSNTQVAVDFECS+V PCQGIVLQDINL FNGGG+ TS CHNVRGSAFG QLP SCL
Sbjct: 301 IRGSSNTQVAVDFECSEVVPCQGIVLQDINLPFNGGGRTTSNCHNVRGSAFGHQLPPSCL 360

[Close]

BLAST of Lsi05G005330 vs. ExPASy TrEMBL
Match: A0A5D3B9J1 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001860 PE=3 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 9.8e-179
Identity = 310/360 (86.11%), Postives = 330/360 (91.67%), Query Frame = 0


Query: 1   MQFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQL 60
           MQFGAKPDAITDNSKALS AWS+AC NNGGGVVLIPA GRFLVLPLLLQGPCHGFI IQL
Sbjct: 1   MQFGAKPDAITDNSKALSTAWSEACTNNGGGVVLIPALGRFLVLPLLLQGPCHGFIHIQL 60

Query: 61  DGELLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANRPISMKLNNIN 120
           DGELLAP +++   G+YWLSI++VNNLFIDGLGRLNGRGSTAWP  S NRPISMKL  IN
Sbjct: 61  DGELLAPLNEN--TGDYWLSIDKVNNLFIDGLGRLNGRGSTAWPSASHNRPISMKLTGIN 120

Query: 121 TARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMHSVIG 180
            ARI NIKSYNSKLFHFAVHGC DVTFDHVT+IAPA+SPNTDGIH+S SSGINIMHS IG
Sbjct: 121 NARISNIKSYNSKLFHFAVHGCRDVTFDHVTVIAPANSPNTDGIHVSLSSGINIMHSTIG 180

Query: 181 TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTSNGVR 240
           TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF+ T+NG R
Sbjct: 181 TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFLGTTNGAR 240

Query: 241 IKSWSSSYSNMVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKDVRYEG 300
           IK+WSSSYSNMVSKI +LNLQMNNVKNPIIIDQ YCP SC PNE MS+S+V+IKDVRYEG
Sbjct: 241 IKTWSSSYSNMVSKITFLNLQMNNVKNPIIIDQSYCPHSCGPNE-MSQSKVQIKDVRYEG 300

Query: 301 IKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNGGGQATSICHNVRGSAFGKQLPSSCL 360
           I+GSSNTQVAVDFECSQVFPCQGIVLQDINL FNGGG+ T+ CHNVRGSAFG QLP SCL
Sbjct: 301 IRGSSNTQVAVDFECSQVFPCQGIVLQDINLPFNGGGRTTANCHNVRGSAFGHQLPPSCL 357

[Close]

BLAST of Lsi05G005330 vs. ExPASy TrEMBL
Match: A0A1S4DX91 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491147 PE=3 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.3e-178
Identity = 309/360 (85.83%), Postives = 330/360 (91.67%), Query Frame = 0


Query: 1   MQFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQL 60
           MQFGAKPDAITDNSKALS AWS+AC NNGGGVVLIPA GRFLVLPLLLQGPCHGFI IQL
Sbjct: 1   MQFGAKPDAITDNSKALSTAWSEACTNNGGGVVLIPALGRFLVLPLLLQGPCHGFIHIQL 60

Query: 61  DGELLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANRPISMKLNNIN 120
           DGELLAP +++   G+YWLSI++VNNLFIDGLGRLNGRGSTAWP  S NRPISMKL  IN
Sbjct: 61  DGELLAPLNEN--TGDYWLSIDKVNNLFIDGLGRLNGRGSTAWPSASHNRPISMKLTGIN 120

Query: 121 TARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMHSVIG 180
            ARI NIKSYNSKLFHFAVHGC DVTFDHVT+IAPA+SPNTDGIH+S SSGINIMHS IG
Sbjct: 121 NARISNIKSYNSKLFHFAVHGCRDVTFDHVTVIAPANSPNTDGIHVSLSSGINIMHSTIG 180

Query: 181 TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTSNGVR 240
           TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF+ T+NG R
Sbjct: 181 TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFLGTTNGAR 240

Query: 241 IKSWSSSYSNMVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKDVRYEG 300
           IK+WSSSYSNMVSK+ +LNLQMNNVKNPIIIDQ YCP SC PNE MS+S+V+IKDVRYEG
Sbjct: 241 IKTWSSSYSNMVSKVTFLNLQMNNVKNPIIIDQSYCPHSCGPNE-MSQSKVQIKDVRYEG 300

Query: 301 IKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNGGGQATSICHNVRGSAFGKQLPSSCL 360
           I+GSSNTQVAVDFECSQVFPCQGIVLQDINL FNGGG+ T+ CHNVRGSAFG QLP SCL
Sbjct: 301 IRGSSNTQVAVDFECSQVFPCQGIVLQDINLPFNGGGRTTANCHNVRGSAFGHQLPPSCL 357

[Close]

BLAST of Lsi05G005330 vs. ExPASy TrEMBL
Match: A0A5D3BB58 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001870 PE=3 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 8.3e-170
Identity = 296/351 (84.33%), Postives = 317/351 (90.31%), Query Frame = 0


Query: 16  ALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQLDGELLAPADKHFAIG 75
           ALS AWS AC NNGGGVVLIPAQGRFLVLPLLLQGPCHG IRIQLDGELLAP+DK FA G
Sbjct: 2   ALSSAWSGACENNGGGVVLIPAQGRFLVLPLLLQGPCHGVIRIQLDGELLAPSDKQFATG 61

Query: 76  NYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANRPI------SMKLNNINTARIRNIKS 135
           +YWLSI  VNNLFIDGLGRL G GS+AWP +SANRPI      SMKLNNINTA I+NI S
Sbjct: 62  DYWLSIQNVNNLFIDGLGRLTGSGSSAWPSHSANRPIVRFHLSSMKLNNINTASIKNISS 121

Query: 136 YNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMHSVIGTGDDCISLG 195
           Y+SKLFHFAVHG  DVTFDHVT++AP DSPNTDGIHISSSSGINIMHS IGTGDDCISLG
Sbjct: 122 YDSKLFHFAVHGSRDVTFDHVTVVAPGDSPNTDGIHISSSSGINIMHSTIGTGDDCISLG 181

Query: 196 PGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTSNGVRIKSWSSSYS 255
           PGSK INITNV CGPGHGISIGSLGKYPNEE+VFEVTVRDSTFV T+NG RIKSWSSSYS
Sbjct: 182 PGSKSINITNVYCGPGHGISIGSLGKYPNEENVFEVTVRDSTFVGTTNGARIKSWSSSYS 241

Query: 256 NMVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKDVRYEGIKGSSNTQV 315
           +MVSK+ ++NLQMNNVKNPIIIDQ YCPDSC PNE MSKS+V+I+DVRYEGI+GSSNTQV
Sbjct: 242 SMVSKVTFVNLQMNNVKNPIIIDQSYCPDSCGPNE-MSKSKVQIEDVRYEGIRGSSNTQV 301

Query: 316 AVDFECSQVFPCQGIVLQDINLRFNGGGQATSICHNVRGSAFGKQLPSSCL 361
           AVDFECSQV PCQGIVLQDINL FNGGGQ+TSICHNV+GSAFG+QLP SCL
Sbjct: 302 AVDFECSQVLPCQGIVLQDINLTFNGGGQSTSICHNVKGSAFGQQLPPSCL 351

[Close]

BLAST of Lsi05G005330 vs. ExPASy TrEMBL
Match: A0A6J1F153 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438612 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 6.2e-149
Identity = 258/360 (71.67%), Postives = 304/360 (84.44%), Query Frame = 0


Query: 1   MQFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQL 60
           +QFGA  D  T+++KALS AW +ACG+NG GVVL+PA GRFL+LPL+L+GPC   I + +
Sbjct: 26  IQFGATADGKTESTKALSEAWREACGHNGHGVVLVPA-GRFLILPLVLEGPCKVSIGLLI 85

Query: 61  DGELLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANRPISMKLNNIN 120
            GELLAP  K+FA G YWLSI++V+NLF+DG G LNG GS+AWP +++NRP+SMKL+++N
Sbjct: 86  HGELLAPVSKNFATGGYWLSISKVDNLFVDGSGSLNGGGSSAWPSDTSNRPVSMKLSSVN 145

Query: 121 TARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMHSVIG 180
           TARI  I S NSK FHF VHGC DVTFDHVT+IAPADSPNTDGIH+S SSGINIMHSVI 
Sbjct: 146 TARISKITSSNSKFFHFGVHGCRDVTFDHVTVIAPADSPNTDGIHVSKSSGINIMHSVIR 205

Query: 181 TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTSNGVR 240
           TGDDCISLGPGSKFINIT++QCGPGHGISIGSLGKYPNEEDV EVT+RDSTFV T NGVR
Sbjct: 206 TGDDCISLGPGSKFINITDIQCGPGHGISIGSLGKYPNEEDVSEVTIRDSTFVGTDNGVR 265

Query: 241 IKSWSSSYSNMVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKDVRYEG 300
           IK+WSSS+S+ VSKI +LNL+M +VKNPIIIDQ+YCPD     + MS S+V+I+DVRYE 
Sbjct: 266 IKTWSSSFSSFVSKIAFLNLEMKDVKNPIIIDQKYCPD--CKEDKMSNSKVQIRDVRYED 325

Query: 301 IKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNGGGQATSICHNVRGSAFGKQLPSSCL 360
           I+GSS +QVAV FECSQV  C+ IVLQDINL + G GQ TSICHNV+GSA GKQ PSSCL
Sbjct: 326 IRGSSTSQVAVSFECSQVCSCESIVLQDINLSYKGDGQPTSICHNVQGSASGKQFPSSCL 382

[Close]

BLAST of Lsi05G005330 vs. NCBI nr
Match: XP_038904214.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 663.3 bits (1710), Expect = 1.2e-186
Identity = 316/360 (87.78%), Postives = 340/360 (94.44%), Query Frame = 0


Query: 1   MQFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQL 60
           MQFGAKPDAITDNSKALS AWS+ACGN+GGGVVLIPAQGRFLVLPLLLQGPCHGFI IQL
Sbjct: 34  MQFGAKPDAITDNSKALSNAWSEACGNSGGGVVLIPAQGRFLVLPLLLQGPCHGFIHIQL 93

Query: 61  DGELLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANRPISMKLNNIN 120
           DGELLAP +K FA G+YWLSINQVNNLFIDGLGRLNGRGSTAWPY+SA+RP+SMKL NIN
Sbjct: 94  DGELLAPVNKQFATGDYWLSINQVNNLFIDGLGRLNGRGSTAWPYSSASRPVSMKLTNIN 153

Query: 121 TARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMHSVIG 180
           TARIRNIKSYNSKLFHFAVHGCH+V FDHVT+IAP DSPNTDGIHISSSSGINIMHSVI 
Sbjct: 154 TARIRNIKSYNSKLFHFAVHGCHNVMFDHVTVIAPTDSPNTDGIHISSSSGINIMHSVIS 213

Query: 181 TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTSNGVR 240
           TGDDCISLGPGSKFINITN+QCGPGHGISIGSLGKYPNEEDVFEVT+RDS F+ TSNGVR
Sbjct: 214 TGDDCISLGPGSKFINITNIQCGPGHGISIGSLGKYPNEEDVFEVTIRDSIFIGTSNGVR 273

Query: 241 IKSWSSSYSNMVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKDVRYEG 300
           IKSWSSSYS++VSK+ Y NLQMNNVKNPI+IDQ YCPDSC PNEM   SRV+IKDVRYEG
Sbjct: 274 IKSWSSSYSSLVSKVSYRNLQMNNVKNPILIDQMYCPDSCGPNEM---SRVQIKDVRYEG 333

Query: 301 IKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNGGGQATSICHNVRGSAFGKQLPSSCL 360
           I+G+SNTQVAV+FECSQ+FPCQGIVLQDINL FNGGG++TSICHNVRGSAFG+QLP SCL
Sbjct: 334 IRGTSNTQVAVNFECSQIFPCQGIVLQDINLPFNGGGKSTSICHNVRGSAFGQQLPPSCL 390

[Close]

BLAST of Lsi05G005330 vs. NCBI nr
Match: XP_031738767.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 648.7 bits (1672), Expect = 3.0e-182
Identity = 309/360 (85.83%), Postives = 332/360 (92.22%), Query Frame = 0


Query: 1   MQFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQL 60
           M FGAKPDAITDNSKALS AWS+AC NNGGG+VLIPA+GRFLVLPLLLQGPCHGFIRIQL
Sbjct: 1   MHFGAKPDAITDNSKALSSAWSEACTNNGGGIVLIPAKGRFLVLPLLLQGPCHGFIRIQL 60

Query: 61  DGELLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANRPISMKLNNIN 120
           DGELLAP D+HFA G+YWLSI+QVNNLFIDGLG L+GRGSTAWP  S NRP+SM+LN IN
Sbjct: 61  DGELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTAWPSTSHNRPVSMRLNGIN 120

Query: 121 TARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMHSVIG 180
            ARI NIKSYNSKLFHFA+HGC DVTFDHVT+IAPA+SPNTDGIHISSSSGINIMHS IG
Sbjct: 121 NARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIMHSTIG 180

Query: 181 TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTSNGVR 240
           TGDDCISLGPGSKFINITN+QCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF+ TSNGVR
Sbjct: 181 TGDDCISLGPGSKFINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGTSNGVR 240

Query: 241 IKSWSSSYSNMVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKDVRYEG 300
           IK+WSSSYS+MVSK+ +LNLQMNNVKNPIIIDQ YCP SC   +MMSKS V+IKDVRYEG
Sbjct: 241 IKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMMSKSMVQIKDVRYEG 300

Query: 301 IKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNGGGQATSICHNVRGSAFGKQLPSSCL 360
           I+GSSNTQVAVDFECS+V PCQGIVLQDINL FNGGG+ TS CHNVRGSAFG QLP SCL
Sbjct: 301 IRGSSNTQVAVDFECSEVVPCQGIVLQDINLPFNGGGRTTSNCHNVRGSAFGHQLPPSCL 360

[Close]

BLAST of Lsi05G005330 vs. NCBI nr
Match: KAA0065793.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYJ96532.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 636.0 bits (1639), Expect = 2.0e-178
Identity = 310/360 (86.11%), Postives = 330/360 (91.67%), Query Frame = 0


Query: 1   MQFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQL 60
           MQFGAKPDAITDNSKALS AWS+AC NNGGGVVLIPA GRFLVLPLLLQGPCHGFI IQL
Sbjct: 1   MQFGAKPDAITDNSKALSTAWSEACTNNGGGVVLIPALGRFLVLPLLLQGPCHGFIHIQL 60

Query: 61  DGELLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANRPISMKLNNIN 120
           DGELLAP +++   G+YWLSI++VNNLFIDGLGRLNGRGSTAWP  S NRPISMKL  IN
Sbjct: 61  DGELLAPLNEN--TGDYWLSIDKVNNLFIDGLGRLNGRGSTAWPSASHNRPISMKLTGIN 120

Query: 121 TARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMHSVIG 180
            ARI NIKSYNSKLFHFAVHGC DVTFDHVT+IAPA+SPNTDGIH+S SSGINIMHS IG
Sbjct: 121 NARISNIKSYNSKLFHFAVHGCRDVTFDHVTVIAPANSPNTDGIHVSLSSGINIMHSTIG 180

Query: 181 TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTSNGVR 240
           TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF+ T+NG R
Sbjct: 181 TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFLGTTNGAR 240

Query: 241 IKSWSSSYSNMVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKDVRYEG 300
           IK+WSSSYSNMVSKI +LNLQMNNVKNPIIIDQ YCP SC PNE MS+S+V+IKDVRYEG
Sbjct: 241 IKTWSSSYSNMVSKITFLNLQMNNVKNPIIIDQSYCPHSCGPNE-MSQSKVQIKDVRYEG 300

Query: 301 IKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNGGGQATSICHNVRGSAFGKQLPSSCL 360
           I+GSSNTQVAVDFECSQVFPCQGIVLQDINL FNGGG+ T+ CHNVRGSAFG QLP SCL
Sbjct: 301 IRGSSNTQVAVDFECSQVFPCQGIVLQDINLPFNGGGRTTANCHNVRGSAFGHQLPPSCL 357

[Close]

BLAST of Lsi05G005330 vs. NCBI nr
Match: XP_016900599.1 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 635.6 bits (1638), Expect = 2.7e-178
Identity = 309/360 (85.83%), Postives = 330/360 (91.67%), Query Frame = 0


Query: 1   MQFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQL 60
           MQFGAKPDAITDNSKALS AWS+AC NNGGGVVLIPA GRFLVLPLLLQGPCHGFI IQL
Sbjct: 1   MQFGAKPDAITDNSKALSTAWSEACTNNGGGVVLIPALGRFLVLPLLLQGPCHGFIHIQL 60

Query: 61  DGELLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANRPISMKLNNIN 120
           DGELLAP +++   G+YWLSI++VNNLFIDGLGRLNGRGSTAWP  S NRPISMKL  IN
Sbjct: 61  DGELLAPLNEN--TGDYWLSIDKVNNLFIDGLGRLNGRGSTAWPSASHNRPISMKLTGIN 120

Query: 121 TARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMHSVIG 180
            ARI NIKSYNSKLFHFAVHGC DVTFDHVT+IAPA+SPNTDGIH+S SSGINIMHS IG
Sbjct: 121 NARISNIKSYNSKLFHFAVHGCRDVTFDHVTVIAPANSPNTDGIHVSLSSGINIMHSTIG 180

Query: 181 TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTSNGVR 240
           TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF+ T+NG R
Sbjct: 181 TGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFLGTTNGAR 240

Query: 241 IKSWSSSYSNMVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKDVRYEG 300
           IK+WSSSYSNMVSK+ +LNLQMNNVKNPIIIDQ YCP SC PNE MS+S+V+IKDVRYEG
Sbjct: 241 IKTWSSSYSNMVSKVTFLNLQMNNVKNPIIIDQSYCPHSCGPNE-MSQSKVQIKDVRYEG 300

Query: 301 IKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNGGGQATSICHNVRGSAFGKQLPSSCL 360
           I+GSSNTQVAVDFECSQVFPCQGIVLQDINL FNGGG+ T+ CHNVRGSAFG QLP SCL
Sbjct: 301 IRGSSNTQVAVDFECSQVFPCQGIVLQDINLPFNGGGRTTANCHNVRGSAFGHQLPPSCL 357

[Close]

BLAST of Lsi05G005330 vs. NCBI nr
Match: XP_038904218.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 634.4 bits (1635), Expect = 5.9e-178
Identity = 304/345 (88.12%), Postives = 322/345 (93.33%), Query Frame = 0


Query: 16  ALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQLDGELLAPADKHFAIG 75
           ALS AWS+ACGNNGGGVVLIPA GRFLVLPLLLQGPCHGFIRIQ DGELLAP D HFA G
Sbjct: 61  ALSRAWSEACGNNGGGVVLIPALGRFLVLPLLLQGPCHGFIRIQFDGELLAPTDNHFATG 120

Query: 76  NYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANRPISMKLNNINTARIRNIKSYNSKLF 135
           NYWLSINQVNNLFIDGLGRLNGRGSTAW Y SANRPISMKLNNINTARIRNIKSYNSKLF
Sbjct: 121 NYWLSINQVNNLFIDGLGRLNGRGSTAWYYKSANRPISMKLNNINTARIRNIKSYNSKLF 180

Query: 136 HFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMHSVIGTGDDCISLGPGSKFI 195
           HFA+HGCHDVTFDHVT+IAPA+SPNTDGIHISSSSGINIMHS+IGTGDDCISLGPGSKFI
Sbjct: 181 HFAMHGCHDVTFDHVTMIAPANSPNTDGIHISSSSGINIMHSMIGTGDDCISLGPGSKFI 240

Query: 196 NITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTSNGVRIKSWSSSYSNMVSKI 255
           NITNV+CGPGHGISIGSLGKYPNEED+FEVTVRDSTF+ TSNGVRIKSW SSYS+MVSK+
Sbjct: 241 NITNVRCGPGHGISIGSLGKYPNEEDIFEVTVRDSTFIGTSNGVRIKSWLSSYSSMVSKV 300

Query: 256 VYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKDVRYEGIKGSSNTQVAVDFEC 315
            Y+NLQMNNVKNP+ IDQ YCPDSC PN  MSKSRV IKDVRYEGI+G+SNTQVAV+FEC
Sbjct: 301 TYMNLQMNNVKNPVPIDQMYCPDSCGPN-AMSKSRVHIKDVRYEGIRGTSNTQVAVNFEC 360

Query: 316 SQVFPCQGIVLQDINLRFNGGGQATSICHNVRGSAFGKQLPSSCL 361
           SQVFPC+GI LQDINL FNGGG +TS CHNVRGS FG+QLP SCL
Sbjct: 361 SQVFPCEGIGLQDINLPFNGGGNSTSRCHNVRGSTFGQQLPPSCL 404

[Close]

BLAST of Lsi05G005330 vs. TAIR 10
Match: AT2G15450.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 307.8 bits (787), Expect = 1.2e-83
Identity = 161/367 (43.87%), Postives = 225/367 (61.31%), Query Frame = 0


Query: 4   GAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQLDGE 63
           GAKPD  TDN+ A +  WS+AC    G   +   +G F +  +   GPC   I   +DG 
Sbjct: 37  GAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGT 96

Query: 64  LLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANR-------PISMKL 123
           LLAPA+      + W++   +NNL I G G L+G+G  +WP+N  +         ++M  
Sbjct: 97  LLAPANPSDIKQDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCPKLAMTMGF 156

Query: 124 NNINTARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMH 183
             +N + I++I S NSK+ HF     H      VTI AP DSPNTDGI + S S I I  
Sbjct: 157 AFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISD 216

Query: 184 SVIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTS 243
           + IGTGDDCI++  G+  +NI+NV CGPGHGIS+GSLGK  +E+DV ++ VRD  F  TS
Sbjct: 217 TNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDVKDLIVRDVIFNGTS 276

Query: 244 NGVRIKSWSSSYSN-MVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKD 303
           +G+RIK+W SS S  +VS  VY N+QM +V  PI IDQ+YCP     +E   +S V+I++
Sbjct: 277 DGIRIKNWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERKGESHVQIQN 336

Query: 304 VRYEGIKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNG--GGQATSICHNVRGSAFGK 361
           ++ + I G+S  +VAV+ +CS++FPC+ + L DIN++ NG   G +TS+C NV G A GK
Sbjct: 337 LKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNGVKDGSSTSVCENVDGFARGK 396

[Close]

BLAST of Lsi05G005330 vs. TAIR 10
Match: AT1G43080.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 307.0 bits (785), Expect = 2.0e-83
Identity = 157/369 (42.55%), Postives = 229/369 (62.06%), Query Frame = 0


Query: 2   QFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQLD 61
           ++G++PD  TDN+ A +  W +AC    G   +   +G F +  +   GPC   I   +D
Sbjct: 35  RYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVID 94

Query: 62  GELLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANR-------PISM 121
           G LLAPA+      + W++   +NNL I G G L+G+G  +WP N  ++        ++M
Sbjct: 95  GTLLAPANPRDIKQDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTM 154

Query: 122 KLNNINTARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINI 181
               +N +RI++I S NSK+ HF     H      VTI AP DSPNTDGI + S S I+I
Sbjct: 155 GFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHI 214

Query: 182 MHSVIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVD 241
            ++ IGTGDDCI++  G+  ++I+N++CGPGHGIS+GSLGK  +E+DV  +TVRD+ F  
Sbjct: 215 SNTNIGTGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNG 274

Query: 242 TSNGVRIKSWSSSYSN-MVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEI 301
           TS+G+RIK+W SS S  +VS  +Y N+QM +V  PI IDQ+YCP     +E   +S V+I
Sbjct: 275 TSDGIRIKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPCEHEKKGESHVQI 334

Query: 302 KDVRYEGIKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNG--GGQATSICHNVRGSAF 361
           +D++ + I G+SN  VAV+ +CS+ FPC+ + L DINL+  G   G +T++C NV GS  
Sbjct: 335 QDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTGLEKGHSTAMCENVDGSVR 394

[Close]

BLAST of Lsi05G005330 vs. TAIR 10
Match: AT2G26620.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 303.9 bits (777), Expect = 1.7e-82
Identity = 162/367 (44.14%), Postives = 226/367 (61.58%), Query Frame = 0


Query: 4   GAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQLDGE 63
           G+KPD  TDN+ A +  WS+AC    G   +   +G F +  +   GPC   I   +DG 
Sbjct: 37  GSKPDGKTDNTNAFTSIWSRACKRISGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGT 96

Query: 64  LLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANR-------PISMKL 123
           LLAPA+ +    + W++   +NNL I G G L+G+G  +WP N  ++        ISM  
Sbjct: 97  LLAPANPNDIKQDTWINFRYINNLSISGSGTLDGQGKQSWPLNDCHKNPNCPKLAISMGF 156

Query: 124 NNINTARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMH 183
             +N + I++I S NSK+ HF     H      VTI AP+DSPNTDGI + S S I I +
Sbjct: 157 AFVNNSNIKDITSLNSKMGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMGSCSNIQISN 216

Query: 184 SVIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTS 243
           + IGTGDDCI++  G+  +NI+N+ CGPGHGIS+GSLGK  +E+DV ++ VRD  F  TS
Sbjct: 217 TNIGTGDDCIAILSGTTKLNISNINCGPGHGISVGSLGKNKDEKDVKDLFVRDVIFNGTS 276

Query: 244 NGVRIKSWSSSYSN-MVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKD 303
           +G+RIK+W SS S  +VS  VY N+QM +V  PI IDQ+YCP    P E   KS V+I+D
Sbjct: 277 DGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPH--PPCEHERKSHVQIQD 336

Query: 304 VRYEGIKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNG--GGQATSICHNVRGSAFGK 361
           ++ + I G+S  +VAV+ +CS+ FPC+ + L DIN++ NG   G + ++C NV G A GK
Sbjct: 337 LKLKNIYGTSKNKVAVNLQCSKSFPCKNVELIDINIKQNGLEDGSSITVCENVDGFARGK 396

[Close]

BLAST of Lsi05G005330 vs. TAIR 10
Match: AT1G43090.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 303.5 bits (776), Expect = 2.2e-82
Identity = 157/362 (43.37%), Postives = 225/362 (62.15%), Query Frame = 0


Query: 2   QFGAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQLD 61
           ++G++PD  TDN+ A +  W  AC    G   +   +G F +  +   GPC   I   +D
Sbjct: 35  RYGSRPDGKTDNANAFTSVWKHACTRISGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVID 94

Query: 62  GELLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANR-------PISM 121
           G LLAPA+      + W++   +NNL I G G L+G+G  +WP N  ++        ++M
Sbjct: 95  GTLLAPANPRDIKQDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTM 154

Query: 122 KLNNINTARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINI 181
               +N +RI++I S NSK+ HF     H      VTI AP DSPNTDGI + S S I+I
Sbjct: 155 GFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHI 214

Query: 182 MHSVIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVD 241
            ++ IGTGDDCI++  G+  ++I+NV+CGPGHGIS+GSLGK  +E+DV  +TVRD+ F  
Sbjct: 215 SNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNG 274

Query: 242 TSNGVRIKSWSSSYSNM-VSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEI 301
           TS+G+RIK+W SS S + VS  +Y N+QM +V  PI IDQ+YCP     +E   KS V+I
Sbjct: 275 TSDGIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPCEHEKKGKSHVQI 334

Query: 302 KDVRYEGIKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNG--GGQATSICHNVRGSAF 354
           +D++ + I G+SN  VAV+ +CS+ FPC+ + L DINL+  G   G +T++C NV GS  
Sbjct: 335 QDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTGLEKGHSTAMCENVDGSVR 394

[Close]

BLAST of Lsi05G005330 vs. TAIR 10
Match: AT2G15460.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 303.5 bits (776), Expect = 2.2e-82
Identity = 159/363 (43.80%), Postives = 223/363 (61.43%), Query Frame = 0


Query: 4   GAKPDAITDNSKALSMAWSQACGNNGGGVVLIPAQGRFLVLPLLLQGPCHGFIRIQLDGE 63
           GAKPD  TDN+ A +  WS+AC    G   +   +G F +  +   GPC   I   +DG 
Sbjct: 37  GAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTFYLGGVEFVGPCKNPIEFIIDGT 96

Query: 64  LLAPADKHFAIGNYWLSINQVNNLFIDGLGRLNGRGSTAWPYNSANR-------PISMKL 123
           LLAPA+      + W++   +NNL I G G L+G+G  +WP+N  +         ++M  
Sbjct: 97  LLAPANPSDIKQDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCPKLAMTMGF 156

Query: 124 NNINTARIRNIKSYNSKLFHFAVHGCHDVTFDHVTIIAPADSPNTDGIHISSSSGINIMH 183
             +N + I++I S NSK+ HF     H      VTI AP DSPNTDGI + S S I I  
Sbjct: 157 AFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISD 216

Query: 184 SVIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFVDTS 243
           + IGTGDDCI++  G+  +NI+NV CGPGHGIS+GSLGK  +E+DV ++ VRD  F  TS
Sbjct: 217 TNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKSKDEKDVKDLIVRDVIFNGTS 276

Query: 244 NGVRIKSWSSSYSN-MVSKIVYLNLQMNNVKNPIIIDQEYCPDSCTPNEMMSKSRVEIKD 303
           +G+RIK+W SS S  +VS  VY N+QM +V  PI IDQ+YCP     +E   +S V+I++
Sbjct: 277 DGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERKGESHVQIQN 336

Query: 304 VRYEGIKGSSNTQVAVDFECSQVFPCQGIVLQDINLRFNG--GGQATSICHNVRGSAFGK 357
           ++ + I G+S  +VAV+ +CS++FPC+ + L DIN++ NG   G +TS+C NV G A GK
Sbjct: 337 LKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNGVKDGSSTSVCENVDGFARGK 396

The following BLAST results are available for this feature:

BLAST of Lsi05G005330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35339	9.7e-83	43.92	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]
Q6H9K0	2.2e-82	43.01	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
P26216	8.2e-82	44.20	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1	[more]
P35338	1.2e-80	43.65	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1	[more]
P24548	7.7e-80	43.58	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]

BLAST of Lsi05G005330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7H9	1.5e-182	85.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063610 PE=3 SV=1	[more]
A0A5D3B9J1	9.8e-179	86.11	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S4DX91	1.3e-178	85.83	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491147 PE=3 SV=1	[more]
A0A5D3BB58	8.3e-170	84.33	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1F153	6.2e-149	71.67	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111438612 PE=3 SV=...	[more]

BLAST of Lsi05G005330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904214.1	1.2e-186	87.78	exopolygalacturonase-like [Benincasa hispida]	[more]
XP_031738767.1	3.0e-182	85.83	exopolygalacturonase [Cucumis sativus]	[more]
KAA0065793.1	2.0e-178	86.11	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYJ96532.1 exopolygalactur...	[more]
XP_016900599.1	2.7e-178	85.83	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]
XP_038904218.1	5.9e-178	88.12	exopolygalacturonase-like [Benincasa hispida]	[more]

BLAST of Lsi05G005330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15450.1	1.2e-83	43.87	Pectin lyase-like superfamily protein	[more]
AT1G43080.1	2.0e-83	42.55	Pectin lyase-like superfamily protein	[more]
AT2G26620.1	1.7e-82	44.14	Pectin lyase-like superfamily protein	[more]
AT1G43090.1	2.2e-82	43.37	Pectin lyase-like superfamily protein	[more]
AT2G15460.1	2.2e-82	43.80	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 142..168 e-value: 6.0 score: 15.8 coord: 169..190 e-value: 3900.0 score: 3.0 coord: 192..212 e-value: 7800.0 score: 0.9 coord: 222..243 e-value: 8.2 score: 15.4
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 25..347 e-value: 1.4E-90 score: 303.7
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 199..212
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..358 e-value: 2.9E-105 score: 354.6
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 2..359
None	No IPR available	PANTHER	PTHR31375:SF246	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 2..359
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 2..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G005330.1	Lsi05G005330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity