Lsi05G005170 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G005170
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	actin-related protein 8
Location	chr05: 6473851 .. 6487515 (+)
RNA-Seq Expression	Lsi05G005170
Synteny	Lsi05G005170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGACGGTTCCATCCACGTCAGTCCTCCACATATCCCAACTCTCTCGAAAAGTCTTCCATGGCCGATTGAATATCGAATTCCATTTCATCCTCCAGAGATTCCCCAAATTTCCTTTTTCGCTTCTCTCTCTGTTCCTTTGGTGGAAATGGGAACTGATTTTCTGTTGAATTCAAATTTACGGGTTGACTAATTTGGCTATGTACCATTCTCTTCAAACCCTCTTCTTTCCTTCCTTTCAATTTCGCAATGGCTACGTTGTTCAGAAAAGTTTGGGGATCCGTGTCCACCCGCTCCGGATTGCACTTGGAAATGCCGTTTACTGTTCAAGAGGCGTCGTTGGGTGATTTCGATCGCATTCCCATGGAAATACTGATGCAAATTCTTCAATTAGCTGGACCCAACACCACAGCTAAAATGGGTATGCTTTGTAAATCTTGGAGATCTCTTGTTTCTGACAATAATCTTTGGATTTTTTTCCTTCAAAACCAATTGGAGCCTTGGGATTCTGTTTTGTTTGGAGAAACTAAGTTGGCTTCTGGATACCCTCTTGAGTAAGTTTGAAAAACATGGTCTAATTGCCCTTTTATCTTATTTCACTCCACATGGCATGTCAATTTCATCATGAATATAGTGTTGGCTTTGTAAGAAATGCATTTGTTGTTGCAGAACATTCTCTAGTCAGATGATGCCATTGTCATTCATGGAAGTATATAGCAAACGGGCAGCAGTGCCGGGTTCTGTTATCATTGACGGTGAGCTTGTTGTGTAACCTCCTGAGTTTATTTTTACTTTATTTTCTCTAACAAATGAACTTGCATTTTGTTGTTCAGAATGAACTTTATCAGCTTTTTTTGGCTTTCAAGGGAAATAATTTGATTTCTTTGGATTTGTTGCTTTCCACATAGCCAAAATCAAAGTAGACTCCAATATATTGTTATTGTTAGACCTCTTTGGTAACCATTTGGATTTTGATTTTTGGTTTTTGAAAATTTAGCCTATTTAATTTCTTACAATGGTTTGCATCTTCCTTAAGTAAAGGAGTTGATTTTTTAGCTAAATTTGAAAAACAAAAATAAGTTTTTTAAAAGTGTTTTTTTAGTTTTTAAAATTTGGCTTGGTTTTTAAAAATATTGATAAAGAGTAGATAATAAAACAAAAATGGGTGTTTATAGGCTTAATTTTAAAAAACCAAATGGTTACCCAACGGGATAGTCTAAAAAGCACGGATACGGATATGAGACACGGATATGACACAACATGGACATGGCGACACGCCATATTTTAAATATCTAGGACACGTTTACTAAAATATACATTTTTTAAAATATATATCATTTTCATACCAAAATAAAATTAAAAGTAAATAGGTTGATGCATTTATATGCTTAAAAGACTTCCCTTGATGTATTTCACACTCAAAAGTTAATATTATTGTCATATGTGTGTCTTTTTAGTCTACTCAACAAGTGTTCAATGCATGTCTAACACATTTGTTACACTAACAAGTGTTTGATACATGTCCAACAAGTGTCTGAGTGTCCAAGTGTCGGACACGTGTCGGACACGGACACGCTAACTAAACTAAAGTGTCTGTGCTTCTTAGGGGATAGTAGTGTAGAGTAAACATCTGAACATAGATTAGCACATATGATGATCACTACCTTCTAGTTTCTGGAAACTTGTATCAGGCTTAATTTTAAAGGTTGAATGGACCAGTTCTTTATCAGAGGCTAGTGAGATTTATCCTAGGAAAAAAAGGTTCCAGCTTTGGGTCTGAGTTAACTGACTTGTGTGCTTATTATTTGGTTCCTTTCCCCATTGTTTGCCCTCCCTACTTGTATTTCTGAGTTCTAATTGTCCCTGTGATGGGTTTCTTTCTATGTGATGTATGGTTCATTGACTTGCCAAACCATCTTTGTATCTCTTTCATCGATAAAGTTATGTTTTTAATCAAAAAGTTTAATGGTGCAACAAATTAGTAATATTTCAGTGTGTAAAGCTTTCATCTTCTTGATGACATCTTCAAATTTTAAAGTTGTAGGAGTGGATGTTAAAGCACTCTTATCATCTCTTGTTTGTTATTGAGAAGGTGGTTCTGGTTATTGCAAATTTGGTTGGAGCAAATACGGCTGTCCATCTGGGCGTTCTGCAACATTTTTGGTGAGTGCTGTCTGTCAACTCCCTGTTCCTGTTTATATCAAAACCGTTCCATTTGGAAAATTGCCTATAGGTGGTAAATAGCTTTGATTTTTGGTCTTTTATTAAGTCCAGTAATTGAACTTCTTGTTTTGCCTGTAGGAATTTGGGAACATCGAATCTCCTATGTATTCTAGACTTCGGCATTTTTTTGCTACTATTTATAGCAGGCTTGTTCTTTTCTTCTTTTTTTTATAGCTGATATTTTACACTCCCCTCTCTTTGTTCCGCTAAAAGGAAAAAAAGAAAAGACAAACAAAGGAAACCACATACATGATGAACTTATTTCTTGAGTGGGTATAAAGATGAATCGCTAATCTTCTTATAAGTTTCAGTTTGTACTGACATGTCCACTGCACCTAATTTCAGGATGCGGGTTAAAACATCTTTCCATCCAGTGGTAGTGTCATTACCAATCTGCCATTATGATGGTCAGCTTCTTATTCTTAATTTTCCATTGTTACAATGCTTTTTGACATATTAGTCCATGTTTTTCTGTTTATCTATTTGTATTTCCATTATTATATATAAAAGTGTGGATAGTAGAGGTACTTGTTTTTGGACAATGATGCCTCCATACTTTTAGTAAACTCCAAACTAATATTACTACTTTAATTTAGTGCTCTCACATGTTAGTTGTTATTAGTCTTTTTTTCATTATATCAATGAAACTTCGTTTCTGTTTCAAAAAAAAAAAGAAAAAACATGTTAGTTGTTATTAAAAAATGCATTTGATAAATGGTAAAGAATGATCTATTTATAATTCATTTTTTCTTATTTTATAGATTTAAAAACATAGTATCTAAATAAGTAAAAATAATAATATTTGAAATGTGGAATGGTATATCAATCCTTTTTAGTTTCCTGAAAAATAATCCAAAAAATATAAAAAAAAATAGAATTTGTAGTTTTATGATTATTTAAGATACTCAGTTTAGCAAAAATATAATATAGTAAATATTAACTTTAAGATGACTTTTCAGAATAATTAATGAAATATCATCAATATTATATAATAAATGTTTTTCTTAACAAAAGAAATTATATTATAAAGGTTCCTCACAATATGTTATAATTATGAATGAAATGATATGATGATAATGTCATTTATGCTATCATTTTTTCCTTTTGGATGAGACAATTTCATTGATAGTATGAAATTAGAAAAAGGGAGAAACCCCTGTGGTGATTACAAAAGACCTTTCCAGTTAGGGAGGAGGGACGAATAACTATAGTGGTGGAAGAGCATTTATGCTATAATGTTTTAATCTATACTGCATAAGAATGTACAATAACATTATACAAACTAGCAGAGTGGTGATACTATTATTAACTTAAAATTTTAGGTTTAAACTCTTTCAAAATTTCACTTTTAAATTTCTATATTCCTGACTATATTGTCATCAATCTTTTAAACTTCAATATATATATATAAATTATGGATTATTGTTAACTTATAGTAATTGTAGCAATGTTTGTTTCTTATGGATCTCAACGTTTTCAGGAAGCTTCATTTATTTATTTTTATTTTTATTATTTTTTATTTATTTTAAGTTTCTGTTTTTATCCTCGGATATGAATCAAATGATTGGTCAATAATTGATTGTTATAATGCATTTTATTTAATGGAGTAGGTTCCAACTTCTAAAACTTCAATTCTAATATGTTAACTTGGTTTTTTGTTTCTGTTTCAAAAAAAATATATGTTAACTTGGTTTTGATAATTAATAAAAAAAATCAAAAAATGATTTATTTTTTTGGTCATGACATGAATTTTATACTTTCAATATTTAGATAATGATGCGTATTGTGAGTAAATATGTTTGCATTTCTTTTCTCCTTCAGATACTGAATCTGCCAAAGCATCAAGACAGCAACTCAAAGAAGCCATCCATTCAGTGTTATTTGACATGAATGTCCCTTCTGTTTGTGCTGTAAATCAGGTTTTATGCTTAAGAAATGTCCTTTTCTTTTTTCCTCCTCCTCCTCCTCTCCTTCTCTTTTAGTGACTGTTATGAGTACAATACCATATAGGCATATATAAAAAACCTCGATATCTATTTGTATGAAGTTTTTTCCGTTCCCTTCCCCACTCCACTCCCTAGTGGGTTGGTATAGTATGAAGGAAACAAAGGAAATAGGTTCTGTTGGAGGGTTTGGAGCCTTTAAAGAAAAAAGAGGGTTCTGTTGGTTTAGAGCTAGATGTTCCTGTCCACCTAGCTTTTTCTACCCAGATGGTGTGGGAATGCAATTATGAATGTTATTGGGATATTAAGGGTATGTCAGTAATTAGCAGTTTGCTAGGGAGAGTTTGTTATAAATAGAGTGGTTTAGAAAGGATGATGGTAGATACTTGTTTACCATTGAAGCTTCGTAATCTCAGGAAAAAAATGATAATATAAAAAGTAGAACTACTGACTTGGGAACTTTCGTAAATTGTCGTCTTAGATAATTACATGCACCGTTTGTTTTTTTTCATGTGTAGGCAACATTAGCCTTGTATGCTGCAAGAAGAACTTCGGGAATTGTTGTCAATGTTGGATTCCAGGTGACTTCAATTGTCCCAAGTAAGCTAACATAACTTTTTATGATCTCTCATTCAACTTTAAGATAATGTGTATTAATCAAGTGTTCTGATGAACAAATCTTAATGGCTCATTATGCATCTTGTATTTCTATTTTTAATAACATATGACGTCCCCTAATTAATTGGAAAACTAAGAAGAAAATTGTGTATCCTTCTGTTTGCTGGTCAATGCCCATCAATGGCTACTTGCTAGTTTACTTGACACCCAATTGGCCAATAGCTACTTTGCACAATCCATGTGGAGTTAATTTTGAGGCATTCGGCTTTTCATTGGCTTGCCATTGAGACTTGAATGAGATGATTGAGGAGTTCCTTCTCTATCTACCTTTTAGGGAGAAAAGTTGTTTCTTTTGGCTTGCAGGGATGTGCGTTGTTGTGGGATCTTTGGGGTGAGAGGAATATTGAGAGGCTTGGAAGGGGTCGCAATTGATGTGTGGTCCCTTGCTAGATTTTATGTTTCTCTTTAGGCTTCGGTTGCAAAAGCTTTTTGTAATTATTCAATGGGTGTTCTTTACAGGACTGGAGGCCCTTTCTTTACTGGTGTTCCTTTTTTTGTGGGCTGGTTTTTTCTTTGTTGTCGGTGTATTATTTCATCTTTTATCATTGTTTCTTATAAAAAAAAATGATGTGAGGAGAGGAATCAGATTGTTTATAGACTCATTGCGAGAGACTTTGAGCTTTCATTCCCCATTATGGCTATTCTGATAAACTCTTCATATATCCAGTTGATTATCTCATGTTGTCTGTTTTTGGTTTTTAACCTTTTCTTCAAGGGTGGAGGATTGAGGTACCTTATGTTAACTCTTTCCACCGTTTTAAGTTCGTTTTCAATTCATAAATAAAATGCTAACAGACTGTGAGTAAAAAAACTAATGGAAAACTAGTTTTAGGAATTGTTACTTTATGAGAAGTTATGTAACCATTCCACCTACTGCATCATGTTTTCTTATTCTTTTGATCAAATTTTTATAGTTTTACATGGCAAAGTAATGCGGAAAGTGGGGGTTGAAGTTGTGGGGCTGGGAGCTTTAAAGCTTACAGGGTACCTCCGAGAGCTGATGCAGCAGAATAATATACATTTTGAATCAATGTACACTGTTCGTACATTGAAAGAGGTACATTAAAAGCTATCATTGTTAAAATTCATGTCATAAGTACGTTTGTTTGGTATATAATCTAGTTGTCTCCTAGGAACTGAAATCTAATAAATTATATTGTTCTTTTTACTACACGTGTGAACTTCTAATGAACTCAATACTTCGTGTCCATGTTGATGCAAGCAAATTAATATTTTTTCCTTTTAGCTTTAGGAATAGTTCAAATATTTTAATGGTTAAATTGCAAATTTGGTCCCTATGGTTTTAAAAGTTAGAATTTAGTCTCTATGCTTTGATAAAACCTCATAAATAGTCCATATGGTTTGATAAAATTCTCATGAATAGTTCTTTTCGTAGGGCTATTTATGAAAGTTTATCAAACCAATAGGGACTAAATTCTAATTATAAACTATAGGGACTAAATCCTAACTTTCTCCAAACCATAAGGACCAAATTTGCAATTTAACCTATTTTAATCTACCTTAAGACCTGGAGTGGACTTGATGCTTTCAATACTCATCACAATTTATTCACGTACACATAATGTCATTTCCCCTTACAGTTGTCAGTGAGAGGCAATGTTTTCTCTTCTTCTTCCCTTTTTTTTTTCCTTTCAAATTACAAGTTATACATAGGTTTATTGAATCATTTTTTTTTGTGATGTTTGATTGCTTAATCAAGTATTATTTTGTCTCTTTTGTTCATATAATCAAATATGATTGTCGAAACTCTAGAACACTTTAAAGTACTTTTAGAGGAAGCACTTAATTAGTGTTTCTGAGTATTTAGAGAAAAGGTGCTCTACTTAAAACCCTTGTTGTTTCGCAAAGCTTGCTTTCCAGTGTGTGAAAACTATCCGAAAATTATTGGTGGGTAGGCTATAAACAATAATGCAAGGACAAGGAGTGGAGCTCTTGATACTTTAATTATACAAGTCAAAAAAATTGTTTTTTACTTAAAAACATACTTTTAAAAGTTTATCTCAAACTCACTTTAAGCTAGATTGCTATTTATTAAGATGAAGTATTTTCTTATAGAAAAAAGAAGGTGAAGTATTCACTCTTAAGAATTTGGCAGAACCTTTTACAGAATGAGTGCCAAATCTTTATGGTTCTAATCTTTGCTGTCCTTTTTAAATGTCGAACATTGATATAAAATTTTGGTTGCCACTTTCTTTTCATCTGCAGATGTAATTATACTTCTCTTTTTTAGTTTTTGTCGCAACTACTCCTTGTTTTTGCAGTTCCAGGTTGCTTTCAGGGGATGTTCAATTCCTTGTATTTTTTTTTTTCCTTTCGGTAACCTCTGCTCAAAGTTATTTGTCAGCAAAAGAAAATTGATTAAAATCATATTATGGTTCTTGAACTGTCATATGCAGTTCATTTTAGCCTCAAACTTTCATGCCTATTTTGTCTTTGTCTAAACTATCAAATATTTTATGTTTGTCTCTCAAGTTTCAATTGTTTTAATTCCCTTTAACTTGTGATAGTGTGTAATGTCTGTAAATTCTTAACTCAGAACCTATGTTATGTTGCCGAAGACTACGAAGCTGAATTGTCTAAAGATACTCAAGCATCCTATGAAGCTGCTGGGGAAGGTTGGTTTACTCTTTCCAAAGAGCGATTTCAAACCGGAGAGATCTTATTCCAACCGCGTATGGGAGGAGTGTAAGTCTGACCCATCCTTTTAGAAAATGTTCTATGTTAAATAACAGAGTTCTCTCTGCTCTTATAAATTGCCATTATGTTAGGTTCAATTTTGAGCATGTCAGAAGACATTCATCCCCTTAGTTAACCAGAAAGTTCCTGCTGGAAAATCAAACTCATCAAAAAATTGTTTTTGTTTCATTGATAACTGAAATACATGTTCTGTGGCAAATCTCTAAAATTACTTTTTACTAGAACTGAAAGTTGGGGATGGTTTGAAGCATTGGTATGGGATGTCAATATGACATGGACATGGTACCGTGCCATTTTATTTTTAAAGAAAGCTACATTCCAAAAAGGACCCCTAAACTTTGCCATTGGTTTAATTTTTTTTTTTTTTTATATTTTCAAAGGACGTAGTATCAAATCAACAAATAAAATCGACTGTCACACATCAATTTCAGCATATCTCTTAAACCGAAAAAAAAATCTTTTCAAACTACTGATACGTTCACATTTGTGGGCAGGCGAGCAATGGGGCTGCACGAGGCTGTTGCACTTTGCATGGACCATTGCCATGATGCAGAACTTTCTTATGATGATTCTTGGTTCAAGACTGTGGTTCTGTCTGGTGGCAGTGCTTGTCTTCCAGGACTTGCAGGTTTTCCTTTTCAACTTTCCTCTTCTTTACATCTTTGAGGTTTCTTTTTCCATACACTTTATGGTTAAATTACAATTTTAGCTTCCTTGACATGTGCTTAATTTCAGTTTAGTGCCTGCAATTTAAAATCTTTTGCTTTGTCTTAGATTTGGTTAAATCTCTCAAAATGTTCGTGCCATTACTATATGTGAATGTAGTTTATTCACATTTTCTTTGGACTTGAGCAATGAGCTAGCATTTAGTCTAAGGTATACCTGAGTTTTGAATTGGCTGGCTCTATTAGACTGAATGTATTGCAGTTCCAGCTAATGTAACGCATGTCTTATTGTGTGTTTGGCAATGACTTCTGAAAAAGTGCTTTTGAAACAAAATCAATATTTCTATAAAGAACCTTAGGAAAAATTAATAACTTGAATAATTTGAAATGTGATTTGTATACCTCTTGGATGATTTTAAATGATCGGAAGTGTTTTCCTAAGAAAAATATTAAGAAATAAAAGGCACTTGAAAGAAATTGGATTGATTTAACGTCTATTTTTGAAGAAACACTTGAGAGATAGAAGACTAAAATGGTAACTATATCCAGAATTAAAAAGTTAGCTAACACTCCTACATGTCCTACAACTGTTGTGATTCAGAAAGGTTGCAGAAAGAACTTTATGGGCTTCTTCCTTCATCAATGTCCAATGGAATTAGAGTCATTCCTCCACCATATGGTACAGACACAGCTTGGTTTGGGGCTAGGCTCATTAGCAATGTAAGTTTACTGAATCTCATTCTTTCATTCCAAGGAACCTTTTGGGTAGTTTCTGTTCAAAACTACTTGTTTCTGTGTTTCTCAAATGTTAATATTATTATTATACATGTACACTTCCAAATCACTATTCACAAAATTATTTTAAAAAAATAACTATTATACAAGTTGGACAATTCCTTAAACCGCAAGCTAAAAGAAAACTGGAGATAACAACCTCTAAAGCAGCTATAACATGTTTCAACTAAATTCTTATTCTAAACAGCAGAAGACTGTTTTCAAAGCACTTCTAAACAGCATCTTCCTCTCTAAAGTTTTTAAATATCAAATAAAATAATTGTTACAAATACATGGGACTAAATGCTTGAAAAGAACCCCTTGTTTTATATGGTTTTGAACTCTTTTATGTTGGTACACAGCTAAGCACCTTCCCTAATCATTGGTGTATTACCAAGAAGCAATTCCGACAAAAGTCAAAACTCAACCTCATTTGGTGAATCACCCTTCGCCTCGGGTTGTTTGCTCGATATTGAAAGTCGATGCCATCATTCAAGTCTTGCGTAGAGCTCGAGGTATCACTAAAATAAAAATGGTAAAGAGTGTATATACTTTCTCCTTATAGCAAAATAGCATCCTTAAATAAAAGTGATTTGTTTAAAATGTAGGGAGTGTAATAAAATATTGCTCGTGTTGTGTTAGGTTACCATAATTAAGTTTACCAAAGTACATATCATATAGACATTCTTTATCAATTGTATTATTCATTTTCTTTTAAGTGATATCCTCTCTCATATATTGTAATACTAAAACAATAGTGAATATTGAATAAGAAAAATATACCATTTTAGTGGGTTTGATATTTTTGTGATATATTAAAATCTCTTGATATGGACATTACATATTGTATTGTGAATATCTGTTGAAGAAACTTCAACAAATATTGAAAATGCCTTTTCAATTTTTTTTTTCAAGCTATAAGTTGTATAAAGATAGAGTCCTTTGCAGGCATCCTTAAATTTGCATCTATTACTGCCACCCCTTTTCAAATTATATGTTGCTGATTTAACCTTCCAGAATTGTAGATTGGTTCAAACTTTTTGGTCTCTACTCAAACCCAATTTTGAGAATAGAATCACTTAGGGCTTCACTGGTATTGCTTTTTCGTTTCTGATTTCCTGTTTTTTTTTTTTAAAGGAATAAAAATAGAACTACGTTTGAAACACATAGGAGCTAGTTGGAACGTTGAGCTGAGTTTTGAAGTCTGGAGTTAATATGTTTGAGTTAAAAAGTTTATGTTTGGAGTGTAGAGTTGTTTAGAGTTGGAAAACATTAGAGGTAGAGAGAGAAAGAGGGAAAGATGAAGTTTTTCGATAAATGTGTAAACTTTAATAGTAAACATTGTTGAAGTTGGTAGAGTTGAGTTATTTAACAACTTATGAAATTTGGCCCACCCCATACATGTTTGGTAAGTTTCGTATTTTCTGAAATTTTAAATGTAAAAGGTAAAATCTTACGTGGAAATAAGTTTTTAAAAGTAAATATAATTTTATATGCTATTCAGATATTTATTATCTGTTTGAAGTAAAGAAAATGATAAAAATAATAATTTTGTTTATGGCTTGGAAAATACTAGAAATAAAAACAAGATACAAGAAATCTGATTTTGTTTCCAAAATTTCTTCTCAGTTTTGGAAACAAAGATGAGAATAAGAGAAATGTAACAATTACCAAATGCTTGCTTCTGTTTCTAAAAGAAAATGAAAACAAGATACTGAAATCGGAACGGCGCTATGTACTACAGAATAGTTGATAGGAACTTATAAGTTCTATGAGCTACCTCTCTTATTGTCAATTGGGTTTAATGGAACCTATATTATCTAATAAATGCAATCAAATCTAGTTTAACTTTTTGAGCACGATAAATGAGATTTGGAATTTTGAAATTTCAATCATGACACATTATTAGATAACACGAGATTCAATCTCAAAATCAATTGACAATGGGAAGAATAACCCATCTATCTTATAAAAAGTGTAAGATTCCTTAATTTTTTTTTCAATGTTAAATTATTAATTTAGTTCCCATGGTTCGAAAAAAGTTAGAATTTAGTCAATATAGTTTATAATTAGAATTTAGTCCTTATGGTTTGATAAAACCTTTCTAAATAATTCTTATGATAGAGACTATTTATGAGAATTTATTAAACTATAGTGTATTATTTATGAAGTTTTTATCAAACTATAGAGACTAAATTCTAATTTTTAAAATTATAGGGATTAGACTCTAACTTTTTCCAAACTATAGAGACTAAATTTATAATTTCACATTTTTTTTTCAATGTGGGATCCTCAACATATATACCAATTACCGTTGAGCTACACAAAAATTAGAGTTGAATTGATAAGTAAATGACGTCCACGATTATTTTATATAAATAAATAAATACGTGGAGATCTTGATGAAGTGGGATGAGATTCACATAATATTAAAAAGAGAGAGTCAAATGAAAGGCATTTTGTTGATTTATTTTCTTTATGTAATAATTTAAAATTGTTGTTCCTATCTTTTAGGGAGATTGTCGAATTTGGAGCCGATACAGAAACGTGGTGGGTCGACCACAAAAATCGGTACAAGAATCCAATGAAGCAGCAGCAAAGAATCATCATCCTCCATTTTCATCTTCAACCCACCAACAACTAATCTCTACCAAACTTTTCCCTTTCCTTCATTCATCAAAAACAAAACCCCCCTCCCAAACTCAAAACACCCTTCAATTTCTCTTTCTTTTCCTTTTTGACCTTCTGAGATTCCTCAACAACAACAACAACAACAAAAAGAAGCGATTTTGGAACCAAGCTCTGCCTTAATCTCAAACAGGTTAAACATTTTTTTCTTCCTCCCCTTTCTTTTGATTTTTGTTTCATTGATTATGGTTTAGTTACTGCTTCATAAGTTTCTGATTTCTGATTCTGTTCTCCCAAGTGTTGAAATGAATATGGGCTTGTTTGTTTATAGACCCTTTTCTTAGATTAAATCTTAGTCTTGAACTTTTTGTGTTTTTCTTCTGATTTTGTCTTAATCAGTTTAGTTCTTTTTGTTTACCTTCATATCCATGGTAAATATGAAGGTAAGTTGAGACATTTTTCTTTATGAAGTGATTCTTTATCCTATGTTTTCTTTTATGGTGTAGAGTGATTTGATTGTTTGTTTTATGGGTGTGAACAGAGACATTGTTTAAACAGTTGGTTGATTCCAAAAGCATCAACTCATTTTGTGTTGTGAAAGTTAAATTGTTGGCAATGGGGAGTGTGGTGGGAAAGTTGGAATCTCCAGAGTGTGTACCAGAAACAAAACTTGAAGCCAAAATGGTTGAGGCAATGAGACAAAGGGCAACTAAAGGAAGCATCATTAGGTCATTTGATAGCATAATCTTGAAATTCCCCAAAGTTGATGATAGCCTTAGAAACTGCAAAACTATTTTCCAACAGTTTGGTGAGTACTTAGTTTGGTTCTGTTCTTTAGAATGCCAATTTAACTATATGGTTACTTAGAGCCACAGCTTATCTGAACCTCAGTTTAAAAGTTCAAGTTTCAAGCCTTGAATTTATAATTACTCTACTTGTACCCCCACAAAATGGTGATGCTTAGAAGTTATGCCTTCTTTATAGATGAGGATTTGAACGGGATAATAGATCGTCGGGAGCTTAAGGAATGCTTCGACGGGCTGGAAATTTCGCTTACGGAGGAGGAAATCGATGATCTCTTTGATGCTTGTGATATTAGTGCAGCCATGGGAATGAAGTTCAATGAATTCATTGTACTTCTCTGCCTTGTCTACTTTCTCAAGGATGATCCCAATGCTATATTTTCTGTATCCAAACGTTTTGTTTTCAAGCTTCTTGTTTCTCCATTCTTTTTCTCTATGCTTTTCTTTTGTATTCCCTGACTTCAACAGAAATCTCATTTTGGAATGCCAAAATTGGAGGAGACATTTGAATCATTGGTTGATGCATTCGTGTTCTTGGACAAGAATAAGGATGGATACGTAAGCAAGAGCGAGATGATATCTGCAATAAACGAGACCACGTCGGGAGAACGTTCTTCAGGGCGGATAGCAATGAGGAGATTCGGTAATGCTCATCGACCCCTTTCCGTTTGTATATTGCTTGCTGTATCAATGAACTAATGTTTGAGCTTGTTCACTCATTTGATCTTGCAGAGGAGATGGACTGGGACAAAAATGGAATGGTGAACTTTAAAGAATTTCTTTTCGCATTCACCCGTTGGGTTGGAATCGACGAGAATGAGGACGGAGAGGAAGAGGAGGAATGAAACATGAAAAACATGTTATCTTGAATATGAAAACTTCTCTTTCCAGTTCTTCGTTCGACGATGGCGAAACCGTGGCACAGTAATGAAAGTAAGGATGTAGTTTCATCAGCACTTTGTTGGCCTTATCACACAAAATTGAACTAGAAGATAACAATGGTTTCAAGGCATTGGTTGTAAATATTTTGTGTGTACTGTGAAAAGTAGAAGTCATATAATTTGAAATGCCATTGTAGAAGCAAAGCCTGAGCCTTTTTCATGTAGGGATTGTTTTTGTTTATTATTATTCTCCATGGCAGCTTGACTGATTTTCACTGGATGGATGGCTTGGGAAAAGCTATATTTTCTTTGGACTTGTCTGACTTACTCTCAATATTACAGACTTTTTTTTTT

mRNA sequence

CTGACGGTTCCATCCACGTCAGTCCTCCACATATCCCAACTCTCTCGAAAAGTCTTCCATGGCCGATTGAATATCGAATTCCATTTCATCCTCCAGAGATTCCCCAAATTTCCTTTTTCGCTTCTCTCTCTGTTCCTTTGGTGGAAATGGGAACTGATTTTCTGTTGAATTCAAATTTACGGGTTGACTAATTTGGCTATGTACCATTCTCTTCAAACCCTCTTCTTTCCTTCCTTTCAATTTCGCAATGGCTACGTTGTTCAGAAAAGTTTGGGGATCCGTGTCCACCCGCTCCGGATTGCACTTGGAAATGCCGTTTACTGTTCAAGAGGCGTCGTTGGGTGATTTCGATCGCATTCCCATGGAAATACTGATGCAAATTCTTCAATTAGCTGGACCCAACACCACAGCTAAAATGGGTATGCTTTGTAAATCTTGGAGATCTCTTGTTTCTGACAATAATCTTTGGATTTTTTTCCTTCAAAACCAATTGGAGCCTTGGGATTCTGTTTTGTTTGGAGAAACTAAGTTGGCTTCTGGATACCCTCTTGAAACATTCTCTAGTCAGATGATGCCATTGTCATTCATGGAAGTATATAGCAAACGGGCAGCAGTGCCGGGTTCTGTTATCATTGACGGTGGTTCTGGTTATTGCAAATTTGGTTGGAGCAAATACGGCTGTCCATCTGGGCGTTCTGCAACATTTTTGGTGAGTGCTGTCTGTCAACTCCCTGTTCCTGTTTATATCAAAACCGTTCCATTTGGAAAATTGCCTATAGGTGATACTGAATCTGCCAAAGCATCAAGACAGCAACTCAAAGAAGCCATCCATTCAGTGTTATTTGACATGAATGTCCCTTCTGTTTGTGCTGTAAATCAGGCAACATTAGCCTTGTATGCTGCAAGAAGAACTTCGGGAATTGTTGTCAATGTTGGATTCCAGGTGACTTCAATTGTCCCAATTTTACATGGCAAAGTAATGCGGAAAGTGGGGGTTGAAGTTGTGGGGCTGGGAGCTTTAAAGCTTACAGGGTACCTCCGAGAGCTGATGCAGCAGAATAATATACATTTTGAATCAATGTACACTGTTCGTACATTGAAAGAGAACCTATGTTATGTTGCCGAAGACTACGAAGCTGAATTGTCTAAAGATACTCAAGCATCCTATGAAGCTGCTGGGGAAGGTTGGTTTACTCTTTCCAAAGAGCGATTTCAAACCGGAGAGATCTTATTCCAACCGCGTATGGGAGGAGTGCGAGCAATGGGGCTGCACGAGGCTGTTGCACTTTGCATGGACCATTGCCATGATGCAGAACTTTCTTATGATGATTCTTGGTTCAAGACTGTGGTTCTGTCTGGTGGCAGTGCTTGTCTTCCAGGACTTGCAGAAAGGTTGCAGAAAGAACTTTATGGGCTTCTTCCTTCATCAATGTCCAATGGAATTAGAGTCATTCCTCCACCATATGGTACAGACACAGCTTGGTTTGGGGCTAGGCTCATTAGCAATCTAAGCACCTTCCCTAATCATTGGTGTATTACCAAGAAGCAATTCCGACAAAAGTCAAAACTCAACCTCATTTGGGAGATTGTCGAATTTGGAGCCGATACAGAAACGTGGTGGGTCGACCACAAAAATCGTTTAGTTCTTTTTGTTTACCTTCATATCCATGGTAAATATGAAGAGACATTGTTTAAACAGTTGGTTGATTCCAAAAGCATCAACTCATTTTGTGTTGTGAAAGTTAAATTGTTGGCAATGGGGAGTGTGGTGGGAAAGTTGGAATCTCCAGAGTGTGTACCAGAAACAAAACTTGAAGCCAAAATGGTTGAGGCAATGAGACAAAGGGCAACTAAAGGAAGCATCATTAGGTCATTTGATAGCATAATCTTGAAATTCCCCAAAGTTGATGATAGCCTTAGAAACTGCAAAACTATTTTCCAACAGTTTGATGAGGATTTGAACGGGATAATAGATCGTCGGGAGCTTAAGGAATGCTTCGACGGGCTGGAAATTTCGCTTACGGAGGAGGAAATCGATGATCTCTTTGATGCTTGTGATATTAGTGCAGCCATGGGAATGAAGTTCAATGAATTCATTGTACTTCTCTGCCTTGTCTACTTTCTCAAGGATGATCCCAATGCTATATTTTCTAAATCTCATTTTGGAATGCCAAAATTGGAGGAGACATTTGAATCATTGGTTGATGCATTCGTGTTCTTGGACAAGAATAAGGATGGATACGTAAGCAAGAGCGAGATGATATCTGCAATAAACGAGACCACGTCGGGAGAACGTTCTTCAGGGCGGATAGCAATGAGGAGATTCGAGGAGATGGACTGGGACAAAAATGGAATGGTGAACTTTAAAGAATTTCTTTTCGCATTCACCCGTTGGGTTGGAATCGACGAGAATGAGGACGGAGAGGAAGAGGAGGAATGAAACATGAAAAACATGTTATCTTGAATATGAAAACTTCTCTTTCCAGTTCTTCGTTCGACGATGGCGAAACCGTGGCACAGTAATGAAAGTAAGGATGTAGTTTCATCAGCACTTTGTTGGCCTTATCACACAAAATTGAACTAGAAGATAACAATGGTTTCAAGGCATTGGTTGTAAATATTTTGTGTGTACTGTGAAAAGTAGAAGTCATATAATTTGAAATGCCATTGTAGAAGCAAAGCCTGAGCCTTTTTCATGTAGGGATTGTTTTTGTTTATTATTATTCTCCATGGCAGCTTGACTGATTTTCACTGGATGGATGGCTTGGGAAAAGCTATATTTTCTTTGGACTTGTCTGACTTACTCTCAATATTACAGACTTTTTTTTTT

Coding sequence (CDS)

ATGGCTACGTTGTTCAGAAAAGTTTGGGGATCCGTGTCCACCCGCTCCGGATTGCACTTGGAAATGCCGTTTACTGTTCAAGAGGCGTCGTTGGGTGATTTCGATCGCATTCCCATGGAAATACTGATGCAAATTCTTCAATTAGCTGGACCCAACACCACAGCTAAAATGGGTATGCTTTGTAAATCTTGGAGATCTCTTGTTTCTGACAATAATCTTTGGATTTTTTTCCTTCAAAACCAATTGGAGCCTTGGGATTCTGTTTTGTTTGGAGAAACTAAGTTGGCTTCTGGATACCCTCTTGAAACATTCTCTAGTCAGATGATGCCATTGTCATTCATGGAAGTATATAGCAAACGGGCAGCAGTGCCGGGTTCTGTTATCATTGACGGTGGTTCTGGTTATTGCAAATTTGGTTGGAGCAAATACGGCTGTCCATCTGGGCGTTCTGCAACATTTTTGGTGAGTGCTGTCTGTCAACTCCCTGTTCCTGTTTATATCAAAACCGTTCCATTTGGAAAATTGCCTATAGGTGATACTGAATCTGCCAAAGCATCAAGACAGCAACTCAAAGAAGCCATCCATTCAGTGTTATTTGACATGAATGTCCCTTCTGTTTGTGCTGTAAATCAGGCAACATTAGCCTTGTATGCTGCAAGAAGAACTTCGGGAATTGTTGTCAATGTTGGATTCCAGGTGACTTCAATTGTCCCAATTTTACATGGCAAAGTAATGCGGAAAGTGGGGGTTGAAGTTGTGGGGCTGGGAGCTTTAAAGCTTACAGGGTACCTCCGAGAGCTGATGCAGCAGAATAATATACATTTTGAATCAATGTACACTGTTCGTACATTGAAAGAGAACCTATGTTATGTTGCCGAAGACTACGAAGCTGAATTGTCTAAAGATACTCAAGCATCCTATGAAGCTGCTGGGGAAGGTTGGTTTACTCTTTCCAAAGAGCGATTTCAAACCGGAGAGATCTTATTCCAACCGCGTATGGGAGGAGTGCGAGCAATGGGGCTGCACGAGGCTGTTGCACTTTGCATGGACCATTGCCATGATGCAGAACTTTCTTATGATGATTCTTGGTTCAAGACTGTGGTTCTGTCTGGTGGCAGTGCTTGTCTTCCAGGACTTGCAGAAAGGTTGCAGAAAGAACTTTATGGGCTTCTTCCTTCATCAATGTCCAATGGAATTAGAGTCATTCCTCCACCATATGGTACAGACACAGCTTGGTTTGGGGCTAGGCTCATTAGCAATCTAAGCACCTTCCCTAATCATTGGTGTATTACCAAGAAGCAATTCCGACAAAAGTCAAAACTCAACCTCATTTGGGAGATTGTCGAATTTGGAGCCGATACAGAAACGTGGTGGGTCGACCACAAAAATCGTTTAGTTCTTTTTGTTTACCTTCATATCCATGGTAAATATGAAGAGACATTGTTTAAACAGTTGGTTGATTCCAAAAGCATCAACTCATTTTGTGTTGTGAAAGTTAAATTGTTGGCAATGGGGAGTGTGGTGGGAAAGTTGGAATCTCCAGAGTGTGTACCAGAAACAAAACTTGAAGCCAAAATGGTTGAGGCAATGAGACAAAGGGCAACTAAAGGAAGCATCATTAGGTCATTTGATAGCATAATCTTGAAATTCCCCAAAGTTGATGATAGCCTTAGAAACTGCAAAACTATTTTCCAACAGTTTGATGAGGATTTGAACGGGATAATAGATCGTCGGGAGCTTAAGGAATGCTTCGACGGGCTGGAAATTTCGCTTACGGAGGAGGAAATCGATGATCTCTTTGATGCTTGTGATATTAGTGCAGCCATGGGAATGAAGTTCAATGAATTCATTGTACTTCTCTGCCTTGTCTACTTTCTCAAGGATGATCCCAATGCTATATTTTCTAAATCTCATTTTGGAATGCCAAAATTGGAGGAGACATTTGAATCATTGGTTGATGCATTCGTGTTCTTGGACAAGAATAAGGATGGATACGTAAGCAAGAGCGAGATGATATCTGCAATAAACGAGACCACGTCGGGAGAACGTTCTTCAGGGCGGATAGCAATGAGGAGATTCGAGGAGATGGACTGGGACAAAAATGGAATGGTGAACTTTAAAGAATTTCTTTTCGCATTCACCCGTTGGGTTGGAATCGACGAGAATGAGGACGGAGAGGAAGAGGAGGAATGA

Protein sequence

MATLFRKVWGSVSTRSGLHLEMPFTVQEASLGDFDRIPMEILMQILQLAGPNTTAKMGMLCKSWRSLVSDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFMEVYSKRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPVPVYIKTVPFGKLPIGDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATLALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMYTVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMGGVRAMGLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSSMSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIWEIVEFGADTETWWVDHKNRLVLFVYLHIHGKYEETLFKQLVDSKSINSFCVVKVKLLAMGSVVGKLESPECVPETKLEAKMVEAMRQRATKGSIIRSFDSIILKFPKVDDSLRNCKTIFQQFDEDLNGIIDRRELKECFDGLEISLTEEEIDDLFDACDISAAMGMKFNEFIVLLCLVYFLKDDPNAIFSKSHFGMPKLEETFESLVDAFVFLDKNKDGYVSKSEMISAINETTSGERSSGRIAMRRFEEMDWDKNGMVNFKEFLFAFTRWVGIDENEDGEEEEE

Homology

[Close]

BLAST of Lsi05G005170 vs. ExPASy Swiss-Prot
Match: Q9FKT0 (Actin-related protein 8 OS=Arabidopsis thaliana OX=3702 GN=ARP8 PE=2 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 4.3e-170
Identity = 302/470 (64.26%), Postives = 357/470 (75.96%), Query Frame = 0


Query: 4   LFRKVWGSVSTRSG---------LHLEMP--FTVQEASLGDFDRIPMEILMQILQLAGPN 63
           + +KVWGSV  RS            +++P       +SLG FD++PM+IL+QIL +  P 
Sbjct: 2   ILKKVWGSVWNRSNSGKDLVNHQRAIDVPPLLLSSSSSLGAFDQLPMDILVQILMMMEPK 61

Query: 64  TTAKMGMLCKSWRSLVSDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLS 123
              K+G+ CK+W+ + S N LWIF+LQ   EPWDS+ F ET L SGYPL   SSQ   LS
Sbjct: 62  DAVKLGLTCKAWKCVASGNRLWIFYLQCSQEPWDSIFFAETSLRSGYPLRMISSQSGELS 121

Query: 124 FMEVYSKRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPVPVYIKTVPF 183
           FM +YS+RA VPGS+IIDGGSGYCKFGWSKY  PSGRSATFL      +  P+Y +   F
Sbjct: 122 FMHIYSQRAQVPGSIIIDGGSGYCKFGWSKYASPSGRSATFLEFG--NIESPIYARLQQF 181

Query: 184 ------------------GKLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQ 243
                               LP+    DTESAKASR+QLK AI +VLFDMNVP+VCAVNQ
Sbjct: 182 FATIFTRMQVKPSMQPIVVSLPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQ 241

Query: 244 ATLALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQN 303
           A LALYAARRTSGIVVN+GFQV +I+PILHGKVMR+VGVEV+G GALKLTG+L+E MQ+N
Sbjct: 242 AVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQEN 301

Query: 304 NIHFESMYTVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQP 363
           NI F+S+YTVRTLKE LCYVA DY+AELSKDTQAS E +GEGWFTLSKERFQTGEILFQP
Sbjct: 302 NISFQSLYTVRTLKEKLCYVALDYKAELSKDTQASVEVSGEGWFTLSKERFQTGEILFQP 361

Query: 364 RMGGVRAMGLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLL 423
           R+ G+RAM LH+AV+LCMDHC  A L+ DDSWFKTVVL+GGSACLPGL+ERL++EL   L
Sbjct: 362 RLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLERELQDHL 421

Query: 424 PSSMSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKL 442
           PSS+SNGIRVIPPPYG DT+W GA+LISNLS FP  WCIT+KQFR+KS+L
Sbjct: 422 PSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQFRRKSRL 469

[Close]

BLAST of Lsi05G005170 vs. ExPASy Swiss-Prot
Match: A8WAT2 (Actin-related protein 8 OS=Oryza sativa subsp. indica OX=39946 GN=ARP8 PE=3 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 1.6e-153
Identity = 277/476 (58.19%), Postives = 345/476 (72.48%), Query Frame = 0


Query: 1   MATLFRKVWGSVSTRSGLHLEMPFTVQEA-------------SLGDFDRIPMEILMQILQ 60
           MA L RKVWGSV  R+      P     A             SLG  D +P+++L QIL+
Sbjct: 1   MAVLLRKVWGSVLARAAAGAAPPEAFAAAASPRRPQAAGEYGSLGALDVLPIDVLAQILR 60

Query: 61  LAGPNTTAKMGMLCKSWRSLVSDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLE--TFS 120
           L GP   A+   +C++WR L SDN LW FFL+   +PW+ V+F ET L +G  L    + 
Sbjct: 61  LLGPADAARSTAVCRAWRLLASDNGLWAFFLRLGPDPWELVVFAETHLGAGPALHPGLYY 120

Query: 121 SQMMPLSFMEVYSKRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPV-- 180
                LSF  VY++RA VPGS+I+DGGSGYCK+GWSKY  PSGR ATFL     + P+  
Sbjct: 121 DSSPQLSFKHVYTRRAVVPGSIIVDGGSGYCKYGWSKYAAPSGRCATFLEFGNIESPMYA 180

Query: 181 -------PVYIK------TVP-FGKLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSV 240
                   +Y +      T P    LP+    DTESA+ASR+Q ++ ++SVLFDMNVP+V
Sbjct: 181 RLRHFLSTIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFDMNVPAV 240

Query: 241 CAVNQATLALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRE 300
           C+V+QA LALYAA+RTSGIVVN+GF  TSIVPI  G+VM ++GVE VG GALKLTG+L+E
Sbjct: 241 CSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKE 300

Query: 301 LMQQNNIHFESMYTVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGE 360
           LMQQ NI FES+YTVRT+KE LCYVA DYEAE  KDTQAS E  GEGWFTLS+ERF+T E
Sbjct: 301 LMQQRNITFESLYTVRTIKEKLCYVAADYEAEKRKDTQASCEVDGEGWFTLSEERFKTAE 360

Query: 361 ILFQPRMGGVRAMGLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKE 420
           ILFQP++GGVRAMGLH+AV+LCMDHC+++E+  DD+W+KTVVLSGGS+CLPGL+ERL+KE
Sbjct: 361 ILFQPQIGGVRAMGLHKAVSLCMDHCYNSEVFGDDNWYKTVVLSGGSSCLPGLSERLEKE 420

Query: 421 LYGLLPSSMSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLN 443
           L  LLP+ +S GIRVIPPP+GTD+AWFGA++ISN+STF   WCI KKQFRQK++ N
Sbjct: 421 LRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRN 476

[Close]

BLAST of Lsi05G005170 vs. ExPASy Swiss-Prot
Match: Q7XR80 (Actin-related protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=ARP8 PE=2 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 1.6e-153
Identity = 277/476 (58.19%), Postives = 345/476 (72.48%), Query Frame = 0


Query: 1   MATLFRKVWGSVSTRSGLHLEMPFTVQEA-------------SLGDFDRIPMEILMQILQ 60
           MA L RKVWGSV  R+      P     A             SLG  D +P+++L QIL+
Sbjct: 1   MAVLLRKVWGSVLARAAAGAAPPEAFAAAASPRRPQAAGEYGSLGALDVLPIDVLAQILR 60

Query: 61  LAGPNTTAKMGMLCKSWRSLVSDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLE--TFS 120
           L GP   A+   +C++WR L SDN LW FFL+   +PW+ V+F ET L +G  L    + 
Sbjct: 61  LLGPADAARSTAVCRAWRLLASDNGLWAFFLRLGPDPWELVVFAETHLGAGPALHPGLYY 120

Query: 121 SQMMPLSFMEVYSKRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPV-- 180
                LSF  VY++RA VPGS+I+DGGSGYCK+GWSKY  PSGR ATFL     + P+  
Sbjct: 121 DSSPQLSFKHVYTRRAVVPGSIIVDGGSGYCKYGWSKYAAPSGRCATFLEFGNIESPMYA 180

Query: 181 -------PVYIK------TVP-FGKLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSV 240
                   +Y +      T P    LP+    DTESA+ASR+Q ++ ++SVLFDMNVP+V
Sbjct: 181 RLRHFLSTIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFDMNVPAV 240

Query: 241 CAVNQATLALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRE 300
           C+V+QA LALYAA+RTSGIVVN+GF  TSIVPI  G+VM ++GVE VG GALKLTG+L+E
Sbjct: 241 CSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKE 300

Query: 301 LMQQNNIHFESMYTVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGE 360
           LMQQ NI FES+YTVRT+KE LCYVA DYEAE  KDTQAS E  GEGWFTLS+ERF+T E
Sbjct: 301 LMQQRNITFESLYTVRTIKEKLCYVAADYEAEKRKDTQASCEVDGEGWFTLSEERFKTAE 360

Query: 361 ILFQPRMGGVRAMGLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKE 420
           ILFQP++GGVRAMGLH+AV+LCMDHC+++E+  DD+W+KTVVLSGGS+CLPGL+ERL+KE
Sbjct: 361 ILFQPQIGGVRAMGLHKAVSLCMDHCYNSEVFGDDNWYKTVVLSGGSSCLPGLSERLEKE 420

Query: 421 LYGLLPSSMSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLN 443
           L  LLP+ +S GIRVIPPP+GTD+AWFGA++ISN+STF   WCI KKQFRQK++ N
Sbjct: 421 LRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRN 476

[Close]

BLAST of Lsi05G005170 vs. ExPASy Swiss-Prot
Match: Q52K82 (Probable calcium-binding protein CML21 OS=Arabidopsis thaliana OX=3702 GN=CML21 PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 8.0e-84
Identity = 158/228 (69.30%), Postives = 187/228 (82.02%), Query Frame = 0


Query: 504 MGSVVGKLES--PECVPETKLEAKMVEAMRQRATKGSIIRSFDSIILKFPKVDDSLRNCK 563
           MG  V K E+   E VPETKLEAK++EA+++RA++G+ ++SF+SI+LKFPK+DD LRNCK
Sbjct: 1   MGGAVTKSETLQKEWVPETKLEAKIIEAVQRRASRGTTMKSFNSIVLKFPKIDDGLRNCK 60

Query: 564 TIFQQFDEDLNGIIDRRELKECFDGLEISLTEEEIDDLFDACDISAAMGMKFNEFIVLLC 623
            IFQ+FDED NG ID  ELK C   LEIS  EEEI+DLF ACDI+  MG+ F EFIVLLC
Sbjct: 61  AIFQEFDEDSNGSIDHTELKNCIRKLEISFDEEEINDLFKACDINEDMGITFTEFIVLLC 120

Query: 624 LVYFLKDDPNAIFSKSHFGMPKLEETFESLVDAFVFLDKNKDGYVSKSEMISAINETTSG 683
           LVY LKDD + +  K   GMPKLE TFE+LVD FVFLD+NKDGYVS+ EM+ AI+E  SG
Sbjct: 121 LVYLLKDDSSTLQKKWTMGMPKLEPTFETLVDTFVFLDENKDGYVSREEMVRAIDE--SG 180

Query: 684 ERSSGRIAMRRFEEMDWDKNGMVNFKEFLFAFTRWVGIDENEDGEEEE 730
           ERSSGRIAM+RFEEMDWDKNGMVNFKEFLFAFT+WVGIDENE+ EEE+
Sbjct: 181 ERSSGRIAMKRFEEMDWDKNGMVNFKEFLFAFTQWVGIDENEEEEEED 226

[Close]

BLAST of Lsi05G005170 vs. ExPASy Swiss-Prot
Match: Q9LRN6 (Probable calcium-binding protein CML22 OS=Arabidopsis thaliana OX=3702 GN=CML22 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 8.1e-44
Identity = 92/208 (44.23%), Postives = 137/208 (65.87%), Query Frame = 0


Query: 519 ETKLEAKMVEAMRQRATKGSIIRSFDSIILKFPKVDDSLRNCKTIFQQFDEDLNGIIDRR 578
           + KL  KMVE+ R        ++S DSII+KFPK+ + LRN +++F+ +D D NG ID  
Sbjct: 18  DAKLARKMVES-RSIYPGHRSLKSMDSIIMKFPKLREGLRNIRSVFESYDNDTNGTIDIE 77

Query: 579 ELKECFDGLEISLTEEEIDDLFDACDISAAMGMKFNEFIVLLCLVYFLKDDPNAIFSKSH 638
           ELK+C + L++SL++EE+  L+  CD+  + G++FNEFIVLLCL+Y L    +   ++S 
Sbjct: 78  ELKKCLEELKLSLSDEEVKGLYSWCDVDGSKGIQFNEFIVLLCLIYLLAKPSSESSTESR 137

Query: 639 FGMPKL-EETFESLVDAFVFLDKNKDGYVSKSEMISAI-NETTSGERSSGRIAMRRFEEM 698
              PKL E  F+ +V+ F+FLDK+  G ++K+++I  + NE    ERS   +   RFEEM
Sbjct: 138 EMGPKLVESIFDPIVEVFLFLDKDGKGKLNKADVIKTLNNEDYPLERSPSHVTNMRFEEM 197

Query: 699 DWDKNGMVNFKEFLFAFTRWVGIDENED 725
           DW + G V F+EFLFAF  WVG+D+ +D
Sbjct: 198 DWGRKGKVGFREFLFAFMSWVGLDDADD 224

[Close]

BLAST of Lsi05G005170 vs. ExPASy TrEMBL
Match: A0A0A0L287 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G060990 PE=3 SV=1)

HSP 1 Score: 786.2 bits (2029), Expect = 1.2e-223
Identity = 403/466 (86.48%), Postives = 418/466 (89.70%), Query Frame = 0


Query: 1   MATLFRKVWGSVSTRSGLHLEMPFT-VQEASLGDFDRIPMEILMQILQLAGPNTTAKMGM 60
           MA L RKVWGSVSTRS LHLE   T  +E+SLGDFDRIP+EILMQILQLAGP TTAKMGM
Sbjct: 1   MAMLLRKVWGSVSTRSRLHLENSSTGFEESSLGDFDRIPVEILMQILQLAGPKTTAKMGM 60

Query: 61  LCKSWRSLV-SDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFMEVYS 120
           LCKSWRSLV SDN LWIFFLQNQLEPWDSVLFGETKLASGYPLETFS QMMPLSFM+VY+
Sbjct: 61  LCKSWRSLVSSDNTLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSGQMMPLSFMKVYN 120

Query: 121 KRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPV---------PVY--- 180
           KRA VPGSVIIDGGSGYCKFGWSKY  PSGRSATFL     + P+          +Y   
Sbjct: 121 KRAEVPGSVIIDGGSGYCKFGWSKYDGPSGRSATFLEFGNIESPMYSRLRHFFATIYSRM 180

Query: 181 -IKTVPFG---KLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATLALYAA 240
            +KT  +     LPI    DTESAKASRQQLKEAI+SVLFDMNVPSVCA+NQATLALYAA
Sbjct: 181 RVKTSFYPVVVSLPICHYDDTESAKASRQQLKEAIYSVLFDMNVPSVCAINQATLALYAA 240

Query: 241 RRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMY 300
           R+TSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMY
Sbjct: 241 RKTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMY 300

Query: 301 TVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMGGVRAM 360
           TVRTLKENLCYVAEDYEAEL+KDTQASYEAAGEGWFTLSKERFQTGEILFQPRMGGVRAM
Sbjct: 301 TVRTLKENLCYVAEDYEAELTKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMGGVRAM 360

Query: 361 GLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSSMSNGI 420
           GLHEAVALCMDHCH AELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPS +SNGI
Sbjct: 361 GLHEAVALCMDHCHAAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSPLSNGI 420

Query: 421 RVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 446
           RVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW
Sbjct: 421 RVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 466

[Close]

BLAST of Lsi05G005170 vs. ExPASy TrEMBL
Match: A0A1S3BL72 (actin-related protein 8 OS=Cucumis melo OX=3656 GN=LOC103491046 PE=3 SV=1)

HSP 1 Score: 778.9 bits (2010), Expect = 1.9e-221
Identity = 401/466 (86.05%), Postives = 415/466 (89.06%), Query Frame = 0


Query: 1   MATLFRKVWGSVSTRSGLHLEMPFT-VQEASLGDFDRIPMEILMQILQLAGPNTTAKMGM 60
           MA L RKVWGSVSTRS L LE   T  +E SLGDFDRIP+EILMQILQLAGP TTAKMGM
Sbjct: 1   MAMLLRKVWGSVSTRSRLPLENSSTGFEEPSLGDFDRIPVEILMQILQLAGPKTTAKMGM 60

Query: 61  LCKSWRSLV-SDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFMEVYS 120
           LCKSWRSLV SDN LWIFFLQNQLEPWDSVLFGETKLASGYPLETFSS MMPLSFM+VYS
Sbjct: 61  LCKSWRSLVSSDNTLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSSMMPLSFMKVYS 120

Query: 121 KRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPV---------PVY--- 180
           KRA VPGSVIIDGGSGYCKFGWSKY  PSGRSATFL     + P+          +Y   
Sbjct: 121 KRAEVPGSVIIDGGSGYCKFGWSKYNGPSGRSATFLEFGNIESPMYSRLRHFFATIYSRM 180

Query: 181 -IKTVPFG---KLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATLALYAA 240
            +KT  +     LPI    DTESAKASRQQLKEAI+SVLFDMNVPSVCA+NQATLALYAA
Sbjct: 181 RVKTSFYPVVVSLPICHYDDTESAKASRQQLKEAIYSVLFDMNVPSVCAINQATLALYAA 240

Query: 241 RRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMY 300
           RR SGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMY
Sbjct: 241 RRISGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMY 300

Query: 301 TVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMGGVRAM 360
           TVRTLKENLCYVAEDYEAEL+KDTQASYEAAGEGWFTLSKERFQTGEILFQPR+GGVRAM
Sbjct: 301 TVRTLKENLCYVAEDYEAELTKDTQASYEAAGEGWFTLSKERFQTGEILFQPRIGGVRAM 360

Query: 361 GLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSSMSNGI 420
           GLHEAVALCMDHCH A+LSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPS +SNGI
Sbjct: 361 GLHEAVALCMDHCHAAQLSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSPLSNGI 420

Query: 421 RVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 446
           RVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW
Sbjct: 421 RVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 466

[Close]

BLAST of Lsi05G005170 vs. ExPASy TrEMBL
Match: A0A6J1F205 (actin-related protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111438741 PE=3 SV=1)

HSP 1 Score: 773.1 bits (1995), Expect = 1.0e-219
Identity = 393/471 (83.44%), Postives = 410/471 (87.05%), Query Frame = 0


Query: 1   MATLFRKVWGSVSTRSGLHLEMPFT-----VQEASLGDFDRIPMEILMQILQLAGPNTTA 60
           MATL RKVWGSVSTRSGLH E   T      +  SLG+FDRIPM+ILMQIL+LAGP T+A
Sbjct: 1   MATLLRKVWGSVSTRSGLHSETSSTDRRGFEEPPSLGEFDRIPMDILMQILKLAGPKTSA 60

Query: 61  KMGMLCKSWRSLVSDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFME 120
           KMGMLCKSWRSLVSDN LWIFFL NQLEPWDSVLFGETKLASGYPLET SSQMMPLSFM+
Sbjct: 61  KMGMLCKSWRSLVSDNTLWIFFLHNQLEPWDSVLFGETKLASGYPLETCSSQMMPLSFMK 120

Query: 121 VYSKRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPVPVYIKTVPF--- 180
           VYSKRA VPGSVIIDGGSGYCKFGWSKY CPSGRS TFL      +  P+Y +   F   
Sbjct: 121 VYSKRAEVPGSVIIDGGSGYCKFGWSKYTCPSGRSPTFLEFG--NIESPMYSRLRHFFAT 180

Query: 181 ---------------GKLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATL 240
                            LPI    DTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATL
Sbjct: 181 IYSRMRVKPSFHPVVVSLPICHYDDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATL 240

Query: 241 ALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIH 300
           ALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIH
Sbjct: 241 ALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIH 300

Query: 301 FESMYTVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMG 360
           FESMYTVRTLKENLCYVAEDYEAEL KDTQASY+AAGEGWFTLSKERFQTGE+LFQPRMG
Sbjct: 301 FESMYTVRTLKENLCYVAEDYEAELCKDTQASYQAAGEGWFTLSKERFQTGEVLFQPRMG 360

Query: 361 GVRAMGLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSS 420
           GVR MGLHEAVALCMDHCH AEL++DDSWFKTVVLSGGSACLPGLA RLQKELYGLLPS 
Sbjct: 361 GVRTMGLHEAVALCMDHCHAAELTWDDSWFKTVVLSGGSACLPGLAVRLQKELYGLLPSP 420

Query: 421 MSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 446
           MS+GIRVIPPPYGTDTAWFGARLISNLSTFP+HWCITKKQFR+KSKLNL+W
Sbjct: 421 MSDGIRVIPPPYGTDTAWFGARLISNLSTFPSHWCITKKQFRRKSKLNLLW 469

[Close]

BLAST of Lsi05G005170 vs. ExPASy TrEMBL
Match: A0A6J1L1Q3 (actin-related protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111500307 PE=3 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 4.4e-218
Identity = 389/471 (82.59%), Postives = 410/471 (87.05%), Query Frame = 0


Query: 1   MATLFRKVWGSVSTRSGLHLE-----MPFTVQEASLGDFDRIPMEILMQILQLAGPNTTA 60
           MATL RKVWGSVSTRSGLH E      P   +  SLG+FDRIPM+ILMQ+L+LAGP T+A
Sbjct: 1   MATLLRKVWGSVSTRSGLHSETSSTDRPGFEEPPSLGEFDRIPMDILMQVLKLAGPKTSA 60

Query: 61  KMGMLCKSWRSLVSDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFME 120
           KMGMLCKSWRSLVSDN LWIFFL NQLEPWDSVLFGETKLASGYP+ETFSSQMMPLSFM+
Sbjct: 61  KMGMLCKSWRSLVSDNTLWIFFLHNQLEPWDSVLFGETKLASGYPIETFSSQMMPLSFMK 120

Query: 121 VYSKRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPVPVYIKTVPF--- 180
           VYSKRA VPGSVIIDGGSGYCKFGWSKY CPSGRS TFL      +  P+Y +   F   
Sbjct: 121 VYSKRAEVPGSVIIDGGSGYCKFGWSKYTCPSGRSPTFLEFG--NIESPMYSRLRHFFAT 180

Query: 181 ---------------GKLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATL 240
                            LPI    DTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATL
Sbjct: 181 IYSRMRVKPSFHPVVVSLPICHYDDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATL 240

Query: 241 ALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIH 300
           ALYAARRTSGIVVNVGFQVTSIVPIL+G+VMRKVGVEVVGLGALKLTGYLRELMQQNNIH
Sbjct: 241 ALYAARRTSGIVVNVGFQVTSIVPILNGEVMRKVGVEVVGLGALKLTGYLRELMQQNNIH 300

Query: 301 FESMYTVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMG 360
           FESMYTVRTLKENLC+VAEDYEAEL KDTQASY+AAGEGWFTLSKERFQTGE+LFQPRMG
Sbjct: 301 FESMYTVRTLKENLCFVAEDYEAELCKDTQASYQAAGEGWFTLSKERFQTGEVLFQPRMG 360

Query: 361 GVRAMGLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSS 420
           GVR MGLHEAVALCMDHCH AEL+ DDSWFKTVVLSGGSACLPGLA RLQKELYGLLPS 
Sbjct: 361 GVRTMGLHEAVALCMDHCHAAELTCDDSWFKTVVLSGGSACLPGLAVRLQKELYGLLPSP 420

Query: 421 MSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 446
           MS+GIRVIPPPYGTDTAWFGARLISNLSTFP+HWCITKKQFR+KSKLNL+W
Sbjct: 421 MSDGIRVIPPPYGTDTAWFGARLISNLSTFPSHWCITKKQFRRKSKLNLLW 469

[Close]

BLAST of Lsi05G005170 vs. ExPASy TrEMBL
Match: A0A6J1E0Z6 (actin-related protein 8-like OS=Momordica charantia OX=3673 GN=LOC111025411 PE=3 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 1.1e-213
Identity = 383/469 (81.66%), Postives = 411/469 (87.63%), Query Frame = 0


Query: 1   MATLFRKVWGSVSTRSGLHLEMPFTVQ-----EASLGDFDRIPMEILMQILQLAGPNTTA 60
           MA L RKVW SVSTRSGLHLEM  + +      +SLG+FD+IPM+IL+QIL+LAGPN+TA
Sbjct: 1   MAMLLRKVWESVSTRSGLHLEMSPSDRRRFEGSSSLGEFDQIPMDILIQILKLAGPNSTA 60

Query: 61  KMGMLCKSWRSLVSDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFME 120
           KMGM+CKSWRSLVSDN+LWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQ+ PLSFM+
Sbjct: 61  KMGMVCKSWRSLVSDNSLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQLTPLSFMK 120

Query: 121 VYSKRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPV---------PVY 180
           +Y KRA  PG+VIIDGGSGYCKFGWSKY CPSGRSATFL     + P+          +Y
Sbjct: 121 IYRKRAEAPGTVIIDGGSGYCKFGWSKYSCPSGRSATFLEFGNIESPMYPRLRHFFATIY 180

Query: 181 ----IKT---VPFGKLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATLAL 240
               +KT        LPI    DTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATLAL
Sbjct: 181 SRMRVKTSFHPVVVSLPICHYDDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATLAL 240

Query: 241 YAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFE 300
           YAAR+TSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNI FE
Sbjct: 241 YAARKTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIQFE 300

Query: 301 SMYTVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMGGV 360
           SMYTVR LKENLCYVAEDYEAELSKDTQAS+EAAGEGWFTLSKERFQTGEILF+PRM GV
Sbjct: 301 SMYTVRALKENLCYVAEDYEAELSKDTQASFEAAGEGWFTLSKERFQTGEILFRPRMAGV 360

Query: 361 RAMGLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSSMS 420
           RAMGLHEAV LCMDHCH AEL+ DDSWFKTVVLSGGS+CLPGLAERLQKE+YGLLPSSM+
Sbjct: 361 RAMGLHEAVVLCMDHCHAAELTCDDSWFKTVVLSGGSSCLPGLAERLQKEVYGLLPSSMA 420

Query: 421 NGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 446
           NGIRVIPPPYG DTAWFGARLISNLSTFP  WCITKKQFR+KSKLNLI+
Sbjct: 421 NGIRVIPPPYGADTAWFGARLISNLSTFPERWCITKKQFRKKSKLNLIF 469

[Close]

BLAST of Lsi05G005170 vs. NCBI nr
Match: XP_038905930.1 (actin-related protein 8 [Benincasa hispida])

HSP 1 Score: 811.2 bits (2094), Expect = 7.2e-231
Identity = 409/464 (88.15%), Postives = 422/464 (90.95%), Query Frame = 0


Query: 1   MATLFRKVWGSVSTRSGLHLEMPFTVQEASLGDFDRIPMEILMQILQLAGPNTTAKMGML 60
           MATLFRKVWGSVSTRSGLHLEMP TV E SLGDFDRIP++ILMQILQLAGP +TAKMGML
Sbjct: 1   MATLFRKVWGSVSTRSGLHLEMPNTVHEPSLGDFDRIPVDILMQILQLAGPKSTAKMGML 60

Query: 61  CKSWRSLVSDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFMEVYSKR 120
           C+SWRSLVSDN LWIFFLQNQLEPWDSVLFGETKLASGYPL+TFSSQMMPLSFM+VYSKR
Sbjct: 61  CRSWRSLVSDNTLWIFFLQNQLEPWDSVLFGETKLASGYPLDTFSSQMMPLSFMKVYSKR 120

Query: 121 AAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPV---------PVY----I 180
           A VPGSVIIDGGSGYCKFGWSKY CPSGRSATFL     + P+          +Y    +
Sbjct: 121 AGVPGSVIIDGGSGYCKFGWSKYNCPSGRSATFLEFGNIESPMYSRLRHFFATIYSRMRV 180

Query: 181 KT---VPFGKLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATLALYAARR 240
           KT        LPI    DTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATLALYAARR
Sbjct: 181 KTSFHPVVVSLPICHYDDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATLALYAARR 240

Query: 241 TSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMYTV 300
           TSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMYTV
Sbjct: 241 TSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMYTV 300

Query: 301 RTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMGGVRAMGL 360
           RTLKENLCYVAEDYEAELSKDT+ASYEAAGEGWFTLSKERFQTGEILFQPRMGGVRAMGL
Sbjct: 301 RTLKENLCYVAEDYEAELSKDTRASYEAAGEGWFTLSKERFQTGEILFQPRMGGVRAMGL 360

Query: 361 HEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSSMSNGIRV 420
           HEAVALCMDHCH AELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPS MSNGIRV
Sbjct: 361 HEAVALCMDHCHAAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSPMSNGIRV 420

Query: 421 IPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 446
           IPPPYGTDTAWFGARL+SNLSTFP HWCITKKQF+QKSKLNLIW
Sbjct: 421 IPPPYGTDTAWFGARLVSNLSTFPKHWCITKKQFQQKSKLNLIW 464

[Close]

BLAST of Lsi05G005170 vs. NCBI nr
Match: XP_004149570.1 (actin-related protein 8 isoform X1 [Cucumis sativus] >KGN56045.1 hypothetical protein Csa_010317 [Cucumis sativus])

HSP 1 Score: 786.2 bits (2029), Expect = 2.5e-223
Identity = 403/466 (86.48%), Postives = 418/466 (89.70%), Query Frame = 0


Query: 1   MATLFRKVWGSVSTRSGLHLEMPFT-VQEASLGDFDRIPMEILMQILQLAGPNTTAKMGM 60
           MA L RKVWGSVSTRS LHLE   T  +E+SLGDFDRIP+EILMQILQLAGP TTAKMGM
Sbjct: 1   MAMLLRKVWGSVSTRSRLHLENSSTGFEESSLGDFDRIPVEILMQILQLAGPKTTAKMGM 60

Query: 61  LCKSWRSLV-SDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFMEVYS 120
           LCKSWRSLV SDN LWIFFLQNQLEPWDSVLFGETKLASGYPLETFS QMMPLSFM+VY+
Sbjct: 61  LCKSWRSLVSSDNTLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSGQMMPLSFMKVYN 120

Query: 121 KRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPV---------PVY--- 180
           KRA VPGSVIIDGGSGYCKFGWSKY  PSGRSATFL     + P+          +Y   
Sbjct: 121 KRAEVPGSVIIDGGSGYCKFGWSKYDGPSGRSATFLEFGNIESPMYSRLRHFFATIYSRM 180

Query: 181 -IKTVPFG---KLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATLALYAA 240
            +KT  +     LPI    DTESAKASRQQLKEAI+SVLFDMNVPSVCA+NQATLALYAA
Sbjct: 181 RVKTSFYPVVVSLPICHYDDTESAKASRQQLKEAIYSVLFDMNVPSVCAINQATLALYAA 240

Query: 241 RRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMY 300
           R+TSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMY
Sbjct: 241 RKTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMY 300

Query: 301 TVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMGGVRAM 360
           TVRTLKENLCYVAEDYEAEL+KDTQASYEAAGEGWFTLSKERFQTGEILFQPRMGGVRAM
Sbjct: 301 TVRTLKENLCYVAEDYEAELTKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMGGVRAM 360

Query: 361 GLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSSMSNGI 420
           GLHEAVALCMDHCH AELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPS +SNGI
Sbjct: 361 GLHEAVALCMDHCHAAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSPLSNGI 420

Query: 421 RVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 446
           RVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW
Sbjct: 421 RVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 466

[Close]

BLAST of Lsi05G005170 vs. NCBI nr
Match: XP_008449065.1 (PREDICTED: actin-related protein 8 [Cucumis melo])

HSP 1 Score: 778.9 bits (2010), Expect = 3.9e-221
Identity = 401/466 (86.05%), Postives = 415/466 (89.06%), Query Frame = 0


Query: 1   MATLFRKVWGSVSTRSGLHLEMPFT-VQEASLGDFDRIPMEILMQILQLAGPNTTAKMGM 60
           MA L RKVWGSVSTRS L LE   T  +E SLGDFDRIP+EILMQILQLAGP TTAKMGM
Sbjct: 1   MAMLLRKVWGSVSTRSRLPLENSSTGFEEPSLGDFDRIPVEILMQILQLAGPKTTAKMGM 60

Query: 61  LCKSWRSLV-SDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFMEVYS 120
           LCKSWRSLV SDN LWIFFLQNQLEPWDSVLFGETKLASGYPLETFSS MMPLSFM+VYS
Sbjct: 61  LCKSWRSLVSSDNTLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSSMMPLSFMKVYS 120

Query: 121 KRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPV---------PVY--- 180
           KRA VPGSVIIDGGSGYCKFGWSKY  PSGRSATFL     + P+          +Y   
Sbjct: 121 KRAEVPGSVIIDGGSGYCKFGWSKYNGPSGRSATFLEFGNIESPMYSRLRHFFATIYSRM 180

Query: 181 -IKTVPFG---KLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATLALYAA 240
            +KT  +     LPI    DTESAKASRQQLKEAI+SVLFDMNVPSVCA+NQATLALYAA
Sbjct: 181 RVKTSFYPVVVSLPICHYDDTESAKASRQQLKEAIYSVLFDMNVPSVCAINQATLALYAA 240

Query: 241 RRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMY 300
           RR SGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMY
Sbjct: 241 RRISGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIHFESMY 300

Query: 301 TVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMGGVRAM 360
           TVRTLKENLCYVAEDYEAEL+KDTQASYEAAGEGWFTLSKERFQTGEILFQPR+GGVRAM
Sbjct: 301 TVRTLKENLCYVAEDYEAELTKDTQASYEAAGEGWFTLSKERFQTGEILFQPRIGGVRAM 360

Query: 361 GLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSSMSNGI 420
           GLHEAVALCMDHCH A+LSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPS +SNGI
Sbjct: 361 GLHEAVALCMDHCHAAQLSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSPLSNGI 420

Query: 421 RVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 446
           RVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW
Sbjct: 421 RVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 466

[Close]

BLAST of Lsi05G005170 vs. NCBI nr
Match: KAG6577506.1 (Actin-related protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 773.5 bits (1996), Expect = 1.7e-219
Identity = 393/471 (83.44%), Postives = 411/471 (87.26%), Query Frame = 0


Query: 1   MATLFRKVWGSVSTRSGLHLEMPFT-----VQEASLGDFDRIPMEILMQILQLAGPNTTA 60
           MATL RKVWGSVSTRSGLH E   T      +  SLG+FDRIPM+ILMQIL+LAGP T+A
Sbjct: 1   MATLLRKVWGSVSTRSGLHSETSSTDRRGFEEPPSLGEFDRIPMDILMQILKLAGPKTSA 60

Query: 61  KMGMLCKSWRSLVSDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFME 120
           KMGMLCKSWRSLVSDN LWIFFL NQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFM+
Sbjct: 61  KMGMLCKSWRSLVSDNTLWIFFLHNQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFMK 120

Query: 121 VYSKRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPVPVYIKTVPF--- 180
           VYSKRA VPGSVIIDGGSGYCKFGWSKY CPSGRS TFL      +  P+Y +   F   
Sbjct: 121 VYSKRAEVPGSVIIDGGSGYCKFGWSKYTCPSGRSPTFLEFG--NIESPMYSRLRHFFAT 180

Query: 181 ---------------GKLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATL 240
                            LPI    DTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATL
Sbjct: 181 IYSRMRVKPSFHPVVVSLPICHYDDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATL 240

Query: 241 ALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIH 300
           ALYAARRTSGIVVNVGFQVTSIVPIL+GKVMRKVGVEVVGLGALKLTGYLRELMQQNNIH
Sbjct: 241 ALYAARRTSGIVVNVGFQVTSIVPILNGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIH 300

Query: 301 FESMYTVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMG 360
           FESMYTVRTLKENLCYVAEDYEAEL KDTQASY+AAGEGWFTLSKERFQTGE+LFQPRMG
Sbjct: 301 FESMYTVRTLKENLCYVAEDYEAELCKDTQASYQAAGEGWFTLSKERFQTGEVLFQPRMG 360

Query: 361 GVRAMGLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSS 420
           GVR MGLHEAVALCMDHCH AEL++DDSWFKTVVLSGGSACLPGLA RLQKELYGLLPS 
Sbjct: 361 GVRTMGLHEAVALCMDHCHAAELTWDDSWFKTVVLSGGSACLPGLAVRLQKELYGLLPSP 420

Query: 421 MSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 446
           MS+GIRVIPPPYGTDTAWFGARLISNLSTFP+HWCITKKQFR+KSKLNL+W
Sbjct: 421 MSDGIRVIPPPYGTDTAWFGARLISNLSTFPSHWCITKKQFRRKSKLNLLW 469

[Close]

BLAST of Lsi05G005170 vs. NCBI nr
Match: XP_022932370.1 (actin-related protein 8 [Cucurbita moschata])

HSP 1 Score: 773.1 bits (1995), Expect = 2.2e-219
Identity = 393/471 (83.44%), Postives = 410/471 (87.05%), Query Frame = 0


Query: 1   MATLFRKVWGSVSTRSGLHLEMPFT-----VQEASLGDFDRIPMEILMQILQLAGPNTTA 60
           MATL RKVWGSVSTRSGLH E   T      +  SLG+FDRIPM+ILMQIL+LAGP T+A
Sbjct: 1   MATLLRKVWGSVSTRSGLHSETSSTDRRGFEEPPSLGEFDRIPMDILMQILKLAGPKTSA 60

Query: 61  KMGMLCKSWRSLVSDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLSFME 120
           KMGMLCKSWRSLVSDN LWIFFL NQLEPWDSVLFGETKLASGYPLET SSQMMPLSFM+
Sbjct: 61  KMGMLCKSWRSLVSDNTLWIFFLHNQLEPWDSVLFGETKLASGYPLETCSSQMMPLSFMK 120

Query: 121 VYSKRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPVPVYIKTVPF--- 180
           VYSKRA VPGSVIIDGGSGYCKFGWSKY CPSGRS TFL      +  P+Y +   F   
Sbjct: 121 VYSKRAEVPGSVIIDGGSGYCKFGWSKYTCPSGRSPTFLEFG--NIESPMYSRLRHFFAT 180

Query: 181 ---------------GKLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATL 240
                            LPI    DTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATL
Sbjct: 181 IYSRMRVKPSFHPVVVSLPICHYDDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQATL 240

Query: 241 ALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIH 300
           ALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIH
Sbjct: 241 ALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQNNIH 300

Query: 301 FESMYTVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQPRMG 360
           FESMYTVRTLKENLCYVAEDYEAEL KDTQASY+AAGEGWFTLSKERFQTGE+LFQPRMG
Sbjct: 301 FESMYTVRTLKENLCYVAEDYEAELCKDTQASYQAAGEGWFTLSKERFQTGEVLFQPRMG 360

Query: 361 GVRAMGLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSS 420
           GVR MGLHEAVALCMDHCH AEL++DDSWFKTVVLSGGSACLPGLA RLQKELYGLLPS 
Sbjct: 361 GVRTMGLHEAVALCMDHCHAAELTWDDSWFKTVVLSGGSACLPGLAVRLQKELYGLLPSP 420

Query: 421 MSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLIW 446
           MS+GIRVIPPPYGTDTAWFGARLISNLSTFP+HWCITKKQFR+KSKLNL+W
Sbjct: 421 MSDGIRVIPPPYGTDTAWFGARLISNLSTFPSHWCITKKQFRRKSKLNLLW 469

[Close]

BLAST of Lsi05G005170 vs. TAIR 10
Match: AT5G56180.1 (actin-related protein 8 )

HSP 1 Score: 599.7 bits (1545), Expect = 3.0e-171
Identity = 302/470 (64.26%), Postives = 357/470 (75.96%), Query Frame = 0


Query: 4   LFRKVWGSVSTRSG---------LHLEMP--FTVQEASLGDFDRIPMEILMQILQLAGPN 63
           + +KVWGSV  RS            +++P       +SLG FD++PM+IL+QIL +  P 
Sbjct: 2   ILKKVWGSVWNRSNSGKDLVNHQRAIDVPPLLLSSSSSLGAFDQLPMDILVQILMMMEPK 61

Query: 64  TTAKMGMLCKSWRSLVSDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLS 123
              K+G+ CK+W+ + S N LWIF+LQ   EPWDS+ F ET L SGYPL   SSQ   LS
Sbjct: 62  DAVKLGLTCKAWKCVASGNRLWIFYLQCSQEPWDSIFFAETSLRSGYPLRMISSQSGELS 121

Query: 124 FMEVYSKRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPVPVYIKTVPF 183
           FM +YS+RA VPGS+IIDGGSGYCKFGWSKY  PSGRSATFL      +  P+Y +   F
Sbjct: 122 FMHIYSQRAQVPGSIIIDGGSGYCKFGWSKYASPSGRSATFLEFG--NIESPIYARLQQF 181

Query: 184 ------------------GKLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQ 243
                               LP+    DTESAKASR+QLK AI +VLFDMNVP+VCAVNQ
Sbjct: 182 FATIFTRMQVKPSMQPIVVSLPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQ 241

Query: 244 ATLALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQN 303
           A LALYAARRTSGIVVN+GFQV +I+PILHGKVMR+VGVEV+G GALKLTG+L+E MQ+N
Sbjct: 242 AVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQEN 301

Query: 304 NIHFESMYTVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQP 363
           NI F+S+YTVRTLKE LCYVA DY+AELSKDTQAS E +GEGWFTLSKERFQTGEILFQP
Sbjct: 302 NISFQSLYTVRTLKEKLCYVALDYKAELSKDTQASVEVSGEGWFTLSKERFQTGEILFQP 361

Query: 364 RMGGVRAMGLHEAVALCMDHCHDAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLL 423
           R+ G+RAM LH+AV+LCMDHC  A L+ DDSWFKTVVL+GGSACLPGL+ERL++EL   L
Sbjct: 362 RLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLERELQDHL 421

Query: 424 PSSMSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKL 442
           PSS+SNGIRVIPPPYG DT+W GA+LISNLS FP  WCIT+KQFR+KS+L
Sbjct: 422 PSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQFRRKSRL 469

[Close]

BLAST of Lsi05G005170 vs. TAIR 10
Match: AT5G56180.2 (actin-related protein 8 )

HSP 1 Score: 429.5 bits (1103), Expect = 5.5e-120
Identity = 223/365 (61.10%), Postives = 265/365 (72.60%), Query Frame = 0


Query: 4   LFRKVWGSVSTRSG---------LHLEMP--FTVQEASLGDFDRIPMEILMQILQLAGPN 63
           + +KVWGSV  RS            +++P       +SLG FD++PM+IL+QIL +  P 
Sbjct: 2   ILKKVWGSVWNRSNSGKDLVNHQRAIDVPPLLLSSSSSLGAFDQLPMDILVQILMMMEPK 61

Query: 64  TTAKMGMLCKSWRSLVSDNNLWIFFLQNQLEPWDSVLFGETKLASGYPLETFSSQMMPLS 123
              K+G+ CK+W+ + S N LWIF+LQ   EPWDS+ F ET L SGYPL   SSQ   LS
Sbjct: 62  DAVKLGLTCKAWKCVASGNRLWIFYLQCSQEPWDSIFFAETSLRSGYPLRMISSQSGELS 121

Query: 124 FMEVYSKRAAVPGSVIIDGGSGYCKFGWSKYGCPSGRSATFLVSAVCQLPVPVYIKTVPF 183
           FM +YS+RA VPGS+IIDGGSGYCKFGWSKY  PSGRSATFL      +  P+Y +   F
Sbjct: 122 FMHIYSQRAQVPGSIIIDGGSGYCKFGWSKYASPSGRSATFLEFG--NIESPIYARLQQF 181

Query: 184 ------------------GKLPI---GDTESAKASRQQLKEAIHSVLFDMNVPSVCAVNQ 243
                               LP+    DTESAKASR+QLK AI +VLFDMNVP+VCAVNQ
Sbjct: 182 FATIFTRMQVKPSMQPIVVSLPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQ 241

Query: 244 ATLALYAARRTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGYLRELMQQN 303
           A LALYAARRTSGIVVN+GFQV +I+PILHGKVMR+VGVEV+G GALKLTG+L+E MQ+N
Sbjct: 242 AVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQEN 301

Query: 304 NIHFESMYTVRTLKENLCYVAEDYEAELSKDTQASYEAAGEGWFTLSKERFQTGEILFQP 337
           NI F+S+YTVRTLKE LCYVA DY+AELSKDTQAS E +GEGWFTLSKERFQTGEILFQP
Sbjct: 302 NISFQSLYTVRTLKEKLCYVALDYKAELSKDTQASVEVSGEGWFTLSKERFQTGEILFQP 361

[Close]

BLAST of Lsi05G005170 vs. TAIR 10
Match: AT4G26470.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 313.2 bits (801), Expect = 5.7e-85
Identity = 158/228 (69.30%), Postives = 187/228 (82.02%), Query Frame = 0


Query: 504 MGSVVGKLES--PECVPETKLEAKMVEAMRQRATKGSIIRSFDSIILKFPKVDDSLRNCK 563
           MG  V K E+   E VPETKLEAK++EA+++RA++G+ ++SF+SI+LKFPK+DD LRNCK
Sbjct: 1   MGGAVTKSETLQKEWVPETKLEAKIIEAVQRRASRGTTMKSFNSIVLKFPKIDDGLRNCK 60

Query: 564 TIFQQFDEDLNGIIDRRELKECFDGLEISLTEEEIDDLFDACDISAAMGMKFNEFIVLLC 623
            IFQ+FDED NG ID  ELK C   LEIS  EEEI+DLF ACDI+  MG+ F EFIVLLC
Sbjct: 61  AIFQEFDEDSNGSIDHTELKNCIRKLEISFDEEEINDLFKACDINEDMGITFTEFIVLLC 120

Query: 624 LVYFLKDDPNAIFSKSHFGMPKLEETFESLVDAFVFLDKNKDGYVSKSEMISAINETTSG 683
           LVY LKDD + +  K   GMPKLE TFE+LVD FVFLD+NKDGYVS+ EM+ AI+E  SG
Sbjct: 121 LVYLLKDDSSTLQKKWTMGMPKLEPTFETLVDTFVFLDENKDGYVSREEMVRAIDE--SG 180

Query: 684 ERSSGRIAMRRFEEMDWDKNGMVNFKEFLFAFTRWVGIDENEDGEEEE 730
           ERSSGRIAM+RFEEMDWDKNGMVNFKEFLFAFT+WVGIDENE+ EEE+
Sbjct: 181 ERSSGRIAMKRFEEMDWDKNGMVNFKEFLFAFTQWVGIDENEEEEEED 226

[Close]

BLAST of Lsi05G005170 vs. TAIR 10
Match: AT4G26470.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 244.6 bits (623), Expect = 2.5e-64
Identity = 126/192 (65.62%), Postives = 152/192 (79.17%), Query Frame = 0


Query: 504 MGSVVGKLES--PECVPETKLEAKMVEAMRQRATKGSIIRSFDSIILKFPKVDDSLRNCK 563
           MG  V K E+   E VPETKLEAK++EA+++RA++G+ ++SF+SI+LKFPK+DD LRNCK
Sbjct: 1   MGGAVTKSETLQKEWVPETKLEAKIIEAVQRRASRGTTMKSFNSIVLKFPKIDDGLRNCK 60

Query: 564 TIFQQFDEDLNGIIDRRELKECFDGLEISLTEEEIDDLFDACDISAAMGMKFNEFIVLLC 623
            IFQ+FDED NG ID  ELK C   LEIS  EEEI+DLF ACDI+  MG+ F EFIVLLC
Sbjct: 61  AIFQEFDEDSNGSIDHTELKNCIRKLEISFDEEEINDLFKACDINEDMGITFTEFIVLLC 120

Query: 624 LVYFLKDDPNAIFSKSHFGMPKLEETFESLVDAFVFLDKNKDGYVSKSEMISAINETTSG 683
           LVY LKDD + +  K   GMPKLE TFE+LVD FVFLD+NKDGYVS+ EM+ AI+E  SG
Sbjct: 121 LVYLLKDDSSTLQKKWTMGMPKLEPTFETLVDTFVFLDENKDGYVSREEMVRAIDE--SG 180

Query: 684 ERSSGRIAMRRF 694
           ERSSGRIAM+RF
Sbjct: 181 ERSSGRIAMKRF 190

[Close]

BLAST of Lsi05G005170 vs. TAIR 10
Match: AT3G24110.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 180.3 bits (456), Expect = 5.8e-45
Identity = 92/208 (44.23%), Postives = 137/208 (65.87%), Query Frame = 0


Query: 519 ETKLEAKMVEAMRQRATKGSIIRSFDSIILKFPKVDDSLRNCKTIFQQFDEDLNGIIDRR 578
           + KL  KMVE+ R        ++S DSII+KFPK+ + LRN +++F+ +D D NG ID  
Sbjct: 18  DAKLARKMVES-RSIYPGHRSLKSMDSIIMKFPKLREGLRNIRSVFESYDNDTNGTIDIE 77

Query: 579 ELKECFDGLEISLTEEEIDDLFDACDISAAMGMKFNEFIVLLCLVYFLKDDPNAIFSKSH 638
           ELK+C + L++SL++EE+  L+  CD+  + G++FNEFIVLLCL+Y L    +   ++S 
Sbjct: 78  ELKKCLEELKLSLSDEEVKGLYSWCDVDGSKGIQFNEFIVLLCLIYLLAKPSSESSTESR 137

Query: 639 FGMPKL-EETFESLVDAFVFLDKNKDGYVSKSEMISAI-NETTSGERSSGRIAMRRFEEM 698
              PKL E  F+ +V+ F+FLDK+  G ++K+++I  + NE    ERS   +   RFEEM
Sbjct: 138 EMGPKLVESIFDPIVEVFLFLDKDGKGKLNKADVIKTLNNEDYPLERSPSHVTNMRFEEM 197

Query: 699 DWDKNGMVNFKEFLFAFTRWVGIDENED 725
           DW + G V F+EFLFAF  WVG+D+ +D
Sbjct: 198 DWGRKGKVGFREFLFAFMSWVGLDDADD 224

The following BLAST results are available for this feature:

BLAST of Lsi05G005170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKT0	4.3e-170	64.26	Actin-related protein 8 OS=Arabidopsis thaliana OX=3702 GN=ARP8 PE=2 SV=1	[more]
A8WAT2	1.6e-153	58.19	Actin-related protein 8 OS=Oryza sativa subsp. indica OX=39946 GN=ARP8 PE=3 SV=1	[more]
Q7XR80	1.6e-153	58.19	Actin-related protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=ARP8 PE=2 SV...	[more]
Q52K82	8.0e-84	69.30	Probable calcium-binding protein CML21 OS=Arabidopsis thaliana OX=3702 GN=CML21 ...	[more]
Q9LRN6	8.1e-44	44.23	Probable calcium-binding protein CML22 OS=Arabidopsis thaliana OX=3702 GN=CML22 ...	[more]

BLAST of Lsi05G005170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L287	1.2e-223	86.48	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G060990 PE=3 ...	[more]
A0A1S3BL72	1.9e-221	86.05	actin-related protein 8 OS=Cucumis melo OX=3656 GN=LOC103491046 PE=3 SV=1	[more]
A0A6J1F205	1.0e-219	83.44	actin-related protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111438741 PE=3 SV=1	[more]
A0A6J1L1Q3	4.4e-218	82.59	actin-related protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111500307 PE=3 SV=1	[more]
A0A6J1E0Z6	1.1e-213	81.66	actin-related protein 8-like OS=Momordica charantia OX=3673 GN=LOC111025411 PE=3...	[more]

BLAST of Lsi05G005170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905930.1	7.2e-231	88.15	actin-related protein 8 [Benincasa hispida]	[more]
XP_004149570.1	2.5e-223	86.48	actin-related protein 8 isoform X1 [Cucumis sativus] >KGN56045.1 hypothetical pr...	[more]
XP_008449065.1	3.9e-221	86.05	PREDICTED: actin-related protein 8 [Cucumis melo]	[more]
KAG6577506.1	1.7e-219	83.44	Actin-related protein 8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022932370.1	2.2e-219	83.44	actin-related protein 8 [Cucurbita moschata]	[more]

BLAST of Lsi05G005170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56180.1	3.0e-171	64.26	actin-related protein 8	[more]
AT5G56180.2	5.5e-120	61.10	actin-related protein 8	[more]
AT4G26470.1	5.7e-85	69.30	Calcium-binding EF-hand family protein	[more]
AT4G26470.2	2.5e-64	65.63	Calcium-binding EF-hand family protein	[more]
AT3G24110.1	5.8e-45	44.23	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 37..77 e-value: 9.8E-4 score: 28.4
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 34..77 e-value: 1.8E-5 score: 24.4
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 31..77 score: 10.292301
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 650..678 e-value: 0.066 score: 22.3 coord: 559..587 e-value: 5.2 score: 12.0 coord: 688..716 e-value: 3.1 score: 13.8
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 651..671 e-value: 6.8E-4 score: 19.0 coord: 563..582 e-value: 0.064 score: 12.8
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 555..590 score: 11.695971
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 646..681 score: 10.691735
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 684..719 score: 9.659605
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 560..620 e-value: 3.43549E-8 score: 48.6981
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 651..714 e-value: 5.7912E-10 score: 53.7057
IPR004000	Actin family	SMART	SM00268	actin_3	coord: 124..464 e-value: 5.1E-19 score: 79.2
IPR004000	Actin family	PFAM	PF00022	Actin	coord: 180..436 e-value: 1.2E-37 score: 129.5
IPR004000	Actin family	PANTHER	PTHR11937	ACTIN	coord: 88..157 coord: 178..441
None	No IPR available	GENE3D	1.20.1280.50		coord: 26..99 e-value: 9.3E-8 score: 33.9
None	No IPR available	GENE3D	3.30.420.40		coord: 209..413 e-value: 2.5E-49 score: 169.8
None	No IPR available	GENE3D	3.30.420.40		coord: 188..436 e-value: 2.5E-49 score: 169.8
None	No IPR available	GENE3D	3.90.640.10	Actin; Chain A, domain 4	coord: 261..340 e-value: 2.5E-49 score: 169.8
None	No IPR available	GENE3D	1.10.238.10		coord: 518..716 e-value: 1.2E-27 score: 98.6
None	No IPR available	PANTHER	PTHR11937:SF456	ACTIN-RELATED PROTEIN 8	coord: 88..157
None	No IPR available	PANTHER	PTHR11937:SF456	ACTIN-RELATED PROTEIN 8	coord: 178..441
None	No IPR available	CDD	cd00012	NBD_sugar-kinase_HSP70_actin	coord: 127..252 e-value: 1.03744E-5 score: 44.8872
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 659..671
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 556..719
IPR043129	ATPase, nucleotide binding domain	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 221..436
IPR043129	ATPase, nucleotide binding domain	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 126..227
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 25..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G005170.1	Lsi05G005170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009653	anatomical structure morphogenesis
cellular_component	GO:0005869	dynactin complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0005515	protein binding