Lsi05G003740 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G003740
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	agamous-like MADS-box protein AGL6
Location	chr05: 4734847 .. 4735809 (+)
RNA-Seq Expression	Lsi05G003740
Synteny	Lsi05G003740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAGAGGAATATTGAGCCTTAAACTGATTCCCAATCTCAAATCTCGCAGAACAACCTTTCTTAAGAGGAAGAAAAGCCTGATGAAGAAGGCCTACGAGCTTTCCACTCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGATTGTGACCCATCAACCCAATTTGAAACTTGGCCTCAAAATCACGATCAAATCCAGGCTATGATCCGTTCCTATAAATCTCACTCTTTCCCCAAACAATCCCGCAACTCCTCTTACGATCTCCAACAATTCTTCTCTGATCGCAAGAACAAAATCGTAACAGAGACATCTAAACTGCGTCAGAATGTTGACAAATTCAAGGATCCCCACCTTGATTCTCTATCGGAACAGCAATTGAAGGAGTTGTTGGCCGCTTTGGATTCCAAAATTGGAGATGCAGACGGCATGATTCAGTTCATGGAGGCCGATTACGATCATTTGATTGAGGAAGCATCTGGAATTTCAAGCATTAACATACCACCATTCAGTCCTTTCGAAACAGAAGAACCCCCTAAGTTAGACATACCGGAGTCGTTGATTGAGCCATATGGGTTTGAATACAATGTCGAGAAGTTCATGGAGGCCGATTACGATCACTTGATTGTGGAAGCATCTGAAATTTCAAGCATTGACCCACCATCATCCAGTTCTTTTGAAACAAAGGAACCCCCAGAATTAGACATATCGGAGTTGTTGATTTGGCCAGATGGGTTTGAATACAATGTCGAGGAGTTTACGGAGGCCGATTGCGATCACTTGTTTGAGGAAGCATCTAGACTTTCAAGCATTGACACACCATCATTCAGTCCTTTCGAAATAGAGGAACCCCCTGGATTAGACATATCGGAGTTGTTGATTTTGGCAGATGAGTTTGAATACAATGTCCAGGATTTTCAATCTCTATTGGAGGACGAGCTTCTCGAAACCCTGCTTTAG

mRNA sequence

ATGGGCAGAGGAATATTGAGCCTTAAACTGATTCCCAATCTCAAATCTCGCAGAACAACCTTTCTTAAGAGGAAGAAAAGCCTGATGAAGAAGGCCTACGAGCTTTCCACTCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGATTGTGACCCATCAACCCAATTTGAAACTTGGCCTCAAAATCACGATCAAATCCAGGCTATGATCCGTTCCTATAAATCTCACTCTTTCCCCAAACAATCCCGCAACTCCTCTTACGATCTCCAACAATTCTTCTCTGATCGCAAGAACAAAATCGTAACAGAGACATCTAAACTGCGTCAGAATGTTGACAAATTCAAGGATCCCCACCTTGATTCTCTATCGGAACAGCAATTGAAGGAGTTGTTGGCCGCTTTGGATTCCAAAATTGGAGATGCAGACGGCATGATTCAGTTCATGGAGGCCGATTACGATCATTTGATTGAGGAAGCATCTGGAATTTCAAGCATTAACATACCACCATTCAGTCCTTTCGAAACAGAAGAACCCCCTAAGTTAGACATACCGGAGTCGTTGATTGAGCCATATGGGTTTGAATACAATGTCGAGAAGTTCATGGAGGCCGATTACGATCACTTGATTGTGGAAGCATCTGAAATTTCAAGCATTGACCCACCATCATCCAGTTCTTTTGAAACAAAGGAACCCCCAGAATTAGACATATCGGAGTTGTTGATTTGGCCAGATGGGTTTGAATACAATGTCGAGGAGTTTACGGAGGCCGATTGCGATCACTTGTTTGAGGAAGCATCTAGACTTTCAAGCATTGACACACCATCATTCAGTCCTTTCGAAATAGAGGAACCCCCTGGATTAGACATATCGGAGTTGTTGATTTTGGCAGATGAGTTTGAATACAATGTCCAGGATTTTCAATCTCTATTGGAGGACGAGCTTCTCGAAACCCTGCTTTAG

Coding sequence (CDS)

ATGGGCAGAGGAATATTGAGCCTTAAACTGATTCCCAATCTCAAATCTCGCAGAACAACCTTTCTTAAGAGGAAGAAAAGCCTGATGAAGAAGGCCTACGAGCTTTCCACTCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGATTGTGACCCATCAACCCAATTTGAAACTTGGCCTCAAAATCACGATCAAATCCAGGCTATGATCCGTTCCTATAAATCTCACTCTTTCCCCAAACAATCCCGCAACTCCTCTTACGATCTCCAACAATTCTTCTCTGATCGCAAGAACAAAATCGTAACAGAGACATCTAAACTGCGTCAGAATGTTGACAAATTCAAGGATCCCCACCTTGATTCTCTATCGGAACAGCAATTGAAGGAGTTGTTGGCCGCTTTGGATTCCAAAATTGGAGATGCAGACGGCATGATTCAGTTCATGGAGGCCGATTACGATCATTTGATTGAGGAAGCATCTGGAATTTCAAGCATTAACATACCACCATTCAGTCCTTTCGAAACAGAAGAACCCCCTAAGTTAGACATACCGGAGTCGTTGATTGAGCCATATGGGTTTGAATACAATGTCGAGAAGTTCATGGAGGCCGATTACGATCACTTGATTGTGGAAGCATCTGAAATTTCAAGCATTGACCCACCATCATCCAGTTCTTTTGAAACAAAGGAACCCCCAGAATTAGACATATCGGAGTTGTTGATTTGGCCAGATGGGTTTGAATACAATGTCGAGGAGTTTACGGAGGCCGATTGCGATCACTTGTTTGAGGAAGCATCTAGACTTTCAAGCATTGACACACCATCATTCAGTCCTTTCGAAATAGAGGAACCCCCTGGATTAGACATATCGGAGTTGTTGATTTTGGCAGATGAGTTTGAATACAATGTCCAGGATTTTCAATCTCTATTGGAGGACGAGCTTCTCGAAACCCTGCTTTAG

Protein sequence

MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNVDKFKDPHLDSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHLIEEASGISSINIPPFSPFETEEPPKLDIPESLIEPYGFEYNVEKFMEADYDHLIVEASEISSIDPPSSSSFETKEPPELDISELLIWPDGFEYNVEEFTEADCDHLFEEASRLSSIDTPSFSPFEIEEPPGLDISELLILADEFEYNVQDFQSLLEDELLETLL

Homology

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BLAST of Lsi05G003740 vs. ExPASy Swiss-Prot
Match: Q9FIM0 (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.7e-12
Identity = 66/260 (25.38%), Postives = 121/260 (46.54%), Query Frame = 0


Query: 5   ILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPS----TQFETW 64
           ++ L+ I N K+R TT+ KRK SL KKA E STLC V+TC+ +      +    ++ E W
Sbjct: 5   VVDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIW 64

Query: 65  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSD--RKNKIVTETSKLRQNVDKFKDP 124
           P++  +++A+IR YK       S     +++ F +D  + N++VT+    R+N     + 
Sbjct: 65  PKDETKVRAIIRKYK--DTVSTSCRKETNVETFVNDVGKGNEVVTKKRVKRENKYSSWEE 124

Query: 125 HLDSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHLIEEASGISSINIPPFSPFETEE 184
            LD  S +QL  +  A+DSK+ +A    +      +H   +     ++    F P    E
Sbjct: 125 KLDKCSREQLHGIFCAVDSKLNEAVTRQERSMFRVNHQAMDTPFPQNLMDQQFMPQYFHE 184

Query: 185 PPKL--------DIPESLIEPYGFEYNVEKFMEADYDHLIVEASEISSIDPPSSSSFETK 244
            P+         ++  SLI P+  +  ++  +   +  L +  S + S     +   + +
Sbjct: 185 QPQFQGFPNNFNNMGFSLISPHDGQIQMDPNLMEKWTDLALTQSLMMSKGNDGTQFMQRQ 244

Query: 245 EPPELDISELLIWPDGFEYN 251
           E P  +  +++    GF  N
Sbjct: 245 EQPYYNREQVVSRSAGFNVN 262

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BLAST of Lsi05G003740 vs. ExPASy Swiss-Prot
Match: Q40872 (Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.3e-09
Identity = 46/157 (29.30%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           +GRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  + +      ST+   +
Sbjct: 17  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-----STRGRLY 76

Query: 61  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQ-QFFSDRKNKIVTETSKLRQNVDKFKDPH 120
              ++ ++  I  YK       + +S  +   QF+    +K+  E S +++N        
Sbjct: 77  EYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGES 136

Query: 121 LDSLSEQQLKELLAALD---SKIGDADGMIQFMEADY 154
           L SL+ + LK L   L+   S+I      + F E +Y
Sbjct: 137 LGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEY 168

[Close]

BLAST of Lsi05G003740 vs. ExPASy Swiss-Prot
Match: Q9LSB2 (Agamous-like MADS-box protein AGL103 OS=Arabidopsis thaliana OX=3702 GN=AGL103 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.4e-08
Identity = 43/132 (32.58%), Postives = 72/132 (54.55%), Query Frame = 0


Query: 16  SRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETWPQNHDQIQAMIRSYK 75
           SR T+ +KR++++ KKA ELS LCD+  CV        + + +TWP+  ++++A+ R Y 
Sbjct: 31  SRATSLIKRQQTVFKKAKELSILCDIDVCVICYGS---NGELKTWPEEREKVKAIARRYG 90

Query: 76  SHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLR----QNVDKFK----DPHLDSLSEQQ 135
             S  K+ R  S DL +F  ++ NK   E  + +    + V K K    DP  D+ S +Q
Sbjct: 91  ELSETKR-RKGSVDLHEFL-EKMNKDDPEKEEKKKIKVRRVPKVKYPVWDPRFDNYSVEQ 150

Query: 136 LKELLAALDSKI 140
           L  L+ +L+  +
Sbjct: 151 LMGLVQSLERNL 157

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BLAST of Lsi05G003740 vs. ExPASy Swiss-Prot
Match: F6I457 (Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.4e-08
Identity = 41/140 (29.29%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  + +      S++   +
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-----SSRGRVY 60

Query: 61  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQ-QFFSDRKNKIVTETSKLRQNVDKFKDPH 120
             +++ I++ I  YK  S    +  S+ ++  Q++     K+  +   L+ +        
Sbjct: 61  EYSNNNIKSTIDRYKKASSDSTNGGSTMEINAQYYQQESAKLRQQIQMLQNSNRHLMGDS 120

Query: 121 LDSLSEQQLKELLAALDSKI 140
           L SL+ ++LK+L   L+  I
Sbjct: 121 LASLTVKELKQLENRLERGI 135

[Close]

BLAST of Lsi05G003740 vs. ExPASy Swiss-Prot
Match: A0A217EJJ0 (Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.4e-08
Identity = 41/140 (29.29%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  + +      S++   +
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-----SSRGRVY 60

Query: 61  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQ-QFFSDRKNKIVTETSKLRQNVDKFKDPH 120
             +++ I++ I  YK  S    +  S+ ++  Q++     K+  +   L+ +        
Sbjct: 61  EYSNNNIKSTIDRYKKASSDSTNGGSTMEINAQYYQQESAKLRQQIQMLQNSNRHLMGDS 120

Query: 121 LDSLSEQQLKELLAALDSKI 140
           L SL+ ++LK+L   L+  I
Sbjct: 121 LASLTVKELKQLENRLERGI 135

[Close]

BLAST of Lsi05G003740 vs. ExPASy TrEMBL
Match: A0A6J1F370 (agamous-like MADS-box protein AGL6 OS=Cucurbita moschata OX=3662 GN=LOC111441717 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72
Identity = 175/303 (57.76%), Postives = 207/303 (68.32%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           MGRG LSLKLI N KSRRTTF KRKKSLMKKAYELSTLCDVQTCV IAS+     +FETW
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASE-----EFETW 60

Query: 61  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNVDKFKDPH- 120
           P +  Q++AMIRSYKS SF KQS  SSYDL QFFSDRKNKIVTETSKLR+ V K KD + 
Sbjct: 61  PSDRTQVEAMIRSYKSQSFCKQSAKSSYDLNQFFSDRKNKIVTETSKLREKVQKSKDTNS 120

Query: 121 ---LDSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHLIEEASGISSINIPPFSPFET 180
              LDSLSE QLK L+A LDSKIG AD MI+FMEADYD+LIE A  ISSI+   FSP ET
Sbjct: 121 DHCLDSLSEHQLKALMATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQIFSPLET 180

Query: 181 EEPPKLDIPESLIEPYGFEYNVEKFMEADYDHLIVEASEISSIDPPSSSSFETKEPPELD 240
           E  P+L+I              E  MEA+YD+LI   +EI S+D  + S FET+   E D
Sbjct: 181 EASPELNIS-------------ELGMEANYDYLIEGDTEILSVDTQTLSPFETELSTEFD 240

Query: 241 ISELLIWPDGFEYNVEEFTEADCDHLFEEASRLSSIDT-PSFSPFEIEEPPGLDISELLI 299
           +SE+             F E++ D L +  +++ SIDT  +FSPFE E  P  D+SE+L+
Sbjct: 241 VSEM-------------FMESNYDPLIKGDAKIVSIDTQKTFSPFETEASPEFDVSEMLM 272

[Close]

BLAST of Lsi05G003740 vs. ExPASy TrEMBL
Match: A0A0A0LAL9 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 4.1e-59
Identity = 141/224 (62.95%), Postives = 161/224 (71.88%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           MGRGILSLKLIPN KSRRTTFLKRKKSL+KKAYELSTLCDVQTC+FIASDCDPST FETW
Sbjct: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETW 60

Query: 61  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNVDKFKDPHL 120
           P NH QI  MIRSYKSHSF K   NSSYDL +FFSDRKNKI+T TSKL  NV       +
Sbjct: 61  PPNHHQIHQMIRSYKSHSFTKP--NSSYDLNRFFSDRKNKILTNTSKLLHNV-------V 120

Query: 121 DSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHLIEEASGISSINIPPFSPFETEEPP 180
           D  SE QL ELL ALDSKI  A+ MI+FMEADYDHLI++A G+ +    P S  E EE  
Sbjct: 121 DHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDT----PPSQTEDEETT 180

Query: 181 KLDIPESLIEPYGF-EYNVEKF---MEADYDHLIVEASEISSID 221
           + ++ +   EP  F EYNVE F   +E  +   +V+ + I   D
Sbjct: 181 QFNVSDLFNEPDEFEEYNVEGFQSLLEDKFLETLVQNNPIPDFD 211

[Close]

BLAST of Lsi05G003740 vs. ExPASy TrEMBL
Match: A0A6J1F4C8 (agamous-like MADS-box protein AGL14 OS=Cucurbita moschata OX=3662 GN=LOC111442271 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.1e-31
Identity = 100/230 (43.48%), Postives = 128/230 (55.65%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFI-----ASDCDP-- 60
           M RG LS  LI N KSR +TF +RK SLMKKAYELSTLCDV+TCV I     A D DP  
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 61  -STQFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNV 120
            S +F TWP N  +++ MI +YK+ +   Q R   +DL  +FSDRK K+VTE  K R+ V
Sbjct: 61  SSVEFHTWPSNRSEVEHMIHAYKNGNCNFQKR-KCFDLSDYFSDRKRKLVTEMCKHREKV 120

Query: 121 DKFK----DPHLDSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHL-----------I 180
            K      D  LD LSEQQL+E +  LDS+I  A  M+ FM+AD ++L           +
Sbjct: 121 GKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMVDFMDADNENLFGMFSCEEYENV 180

Query: 181 EEASGISSINIPPFSPFETEEPPKLDIPESLIEPYGFEYNVEKFMEADYD 208
            +  G SS  +PP    E E P  L+ P       G  +   +F+  D D
Sbjct: 181 VQMGGDSSTPVPPL--VELESPDSLNSPNPNKHEIGCNFENLEFLLEDED 227

[Close]

BLAST of Lsi05G003740 vs. ExPASy TrEMBL
Match: A0A6J1J5U6 (agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.4e-29
Identity = 95/206 (46.12%), Postives = 119/206 (57.77%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFI-----ASDCDP-- 60
           M RG LS  LI N KSR +TF +RK SLMKKAYELSTLCDV+TCV I     A D DP  
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 61  -STQFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNV 120
            S +F TWP N  +++ MI +YK+ +   Q R   +DL  +FSDRK K+VTE  K R+ V
Sbjct: 61  SSVEFHTWPSNRSEVEHMIHAYKNGNCNLQKR-KCFDLSDYFSDRKRKLVTEMCKHREKV 120

Query: 121 DKFK----DPHLDSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHLI-----EEASGI 180
            K      D  LD LSEQQL+E +  LDS+I  A  MI FM+AD ++L      EE   +
Sbjct: 121 GKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMIDFMDADNENLFGMFSCEEYENV 180

Query: 181 SSI----NIPPFSPFETEEPPKLDIP 186
             +    + P  S  E E    L+ P
Sbjct: 181 VQMGGDSSTPVLSLVELESTDSLNSP 205

[Close]

BLAST of Lsi05G003740 vs. ExPASy TrEMBL
Match: A0A6J1CQM2 (uncharacterized protein LOC111013282 OS=Momordica charantia OX=3673 GN=LOC111013282 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.1e-27
Identity = 95/221 (42.99%), Postives = 123/221 (55.66%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPS------ 60
           MGRG LSLKLI + KSR  TF KR KSLMKKA+ELSTLCDV+TCV I     P       
Sbjct: 1   MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSV 60

Query: 61  TQFETWPQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNVDK 120
            +  TWP N ++I+ +IR+YK++   K S   S+ L  FFS R  KI  E +K  + + K
Sbjct: 61  VESHTWPPNREEIEGIIRAYKTNYLRKPSM-KSFGLYDFFSGRMKKIEKERAKFSEEI-K 120

Query: 121 FK--DPHLDSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHLIEEASGISSINIPPFS 180
           +   D  L+ LSEQQL+  +  L SKI  A+GMI FME           G+S+I+    S
Sbjct: 121 YAGWDERLNCLSEQQLRLFMDNLGSKIEAAEGMIGFME-----------GVSAIDSAGVS 180

Query: 181 PFETEEPPKLDIPESLIEPY---GFEYNVEKFMEADYDHLI 211
               EE         +++P     +E+  E   EADYDHLI
Sbjct: 181 TELFEEKTPTSEDSVIVDPQRLPRYEFQAE---EADYDHLI 205

[Close]

BLAST of Lsi05G003740 vs. NCBI nr
Match: XP_038887166.1 (MADS-box protein SVP-like [Benincasa hispida])

HSP 1 Score: 433.0 bits (1112), Expect = 2.3e-117
Identity = 247/367 (67.30%), Postives = 265/367 (72.21%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           MGRG L+LKLIPNLKSRRTTF+KRKKSLMKKAYELSTLCDVQTCVFIASDCDPST FETW
Sbjct: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60

Query: 61  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNVDKFKDPHL 120
           P NHDQI +MIRSYKSHSFPK SRN SY+L QFFS R NKI TETSKLR NVDKFKD HL
Sbjct: 61  PPNHDQIHSMIRSYKSHSFPKLSRN-SYNLHQFFSHRMNKIATETSKLRHNVDKFKDRHL 120

Query: 121 DSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHLIEEASGISSINIPPFSPFETEEPP 180
           DSLSE QL+ELLA+LDSKIG  DGMIQFMEADYDHLIEE SG SSI+ P F P ET+E P
Sbjct: 121 DSLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHLIEEVSGFSSIDTPSFLPSETKETP 180

Query: 181 KLDIPESLIEPYGFEYNVEKFMEADYDHLIVEASEISSIDPPSSSSFETKEPPELDISEL 240
           +LDI E LI   G EYNVE+FME D  HLI E S I SID PS S FET+   ELDISEL
Sbjct: 181 ELDITEWLIGTNGLEYNVEEFMETDNGHLIEETSGILSIDTPSFSPFETE---ELDISEL 240

Query: 241 LIWPDGFEYNVEEFTEADCDHLFEEASRLSSIDTPSFSPFEIE----------------- 300
           LI P+G EYNVEEF EA+ DHL EEASR+S I+TPSFSPFE E                 
Sbjct: 241 LIGPNGLEYNVEEFVEANNDHLIEEASRISGINTPSFSPFETEELGISELLIGTNGLEYN 300

Query: 301 ------------------------------EPPGLDISELLILADEFEYNVQDFQSLLED 321
                                         E   LDISELLI  D FEYNV+DFQSLLED
Sbjct: 301 VEKLMEANNDHLIEEASAISSINTPSFSPFETEELDISELLIEPDGFEYNVEDFQSLLED 360

[Close]

BLAST of Lsi05G003740 vs. NCBI nr
Match: KAG7017922.1 (Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 296.2 bits (757), Expect = 3.4e-76
Identity = 182/326 (55.83%), Postives = 212/326 (65.03%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           MGRG LSLKLI N KSRRTTF KRKKSLMKKAYELSTLCDVQTCV IAS+     +FETW
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASE-----EFETW 60

Query: 61  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNVDKFKDPH- 120
           P +  Q++AMIRSYKS SF KQS  SSYDL QFFSDRKNKIVTETSKLR+ V K KD + 
Sbjct: 61  PSDRTQVEAMIRSYKSQSFCKQSAKSSYDLNQFFSDRKNKIVTETSKLREKVQKSKDTNS 120

Query: 121 ---LDSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHLIEEASGISSINIPPFSPFET 180
              LDSLSE QLK L+  LDSKIG AD MI+FMEADYD+LIE A  ISSI+   FSP ET
Sbjct: 121 DHCLDSLSEHQLKALMVTLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTFSPLET 180

Query: 181 EEPPKLDIPE----------------------SLIEPYGFEYNV-----EKFMEADYDHL 240
           E  PKL+IPE                        + P+  E +      E FME++YD L
Sbjct: 181 EASPKLNIPELGMEANYDYLIRGDTEILSVDTQTLSPFETELSTEFDVSEMFMESNYDPL 240

Query: 241 IVEASEISSIDPPSSSSFETKEPPELDISELLIWPDGFEYNVEEFTEADCDHLFEEASRL 296
           I   +EI SID  + S FET+  PE D+SE+L+             EA+ DHL E A+ +
Sbjct: 241 IKGDAEIVSIDTQTFSPFETEASPEFDVSEMLM-------------EANNDHLIEGAAEI 300

[Close]

BLAST of Lsi05G003740 vs. NCBI nr
Match: KAG6581182.1 (Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295.4 bits (755), Expect = 5.8e-76
Identity = 181/326 (55.52%), Postives = 211/326 (64.72%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           MGRG LSLKLI N KSRRTTF KRKKSLMKKAYELSTLCDVQTCV IAS+     +FETW
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASE-----EFETW 60

Query: 61  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNVDKFK---- 120
           P +  Q++AMIRSYKS SF KQS  SSYDL QFFSDRKNKIVTETSKLR+ V K K    
Sbjct: 61  PSDRTQVEAMIRSYKSQSFCKQSAKSSYDLNQFFSDRKNKIVTETSKLREKVQKSKDTNS 120

Query: 121 DPHLDSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHLIEEASGISSINIPPFSPFET 180
           D HLDSLSE QLK L+A LDSKIG AD MI+FMEADYD+LIE A  ISSI+   F P ET
Sbjct: 121 DDHLDSLSEHQLKALMATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTFRPLET 180

Query: 181 EEPPKLDIPE----------------------SLIEPYGFEYNV-----EKFMEADYDHL 240
           E  P+L+IPE                        + P+  E +      E F E++YD L
Sbjct: 181 EASPELNIPELGMEANYDYLIRGDTEILSVDTQTLSPFEIELSTKFDVSEMFTESNYDPL 240

Query: 241 IVEASEISSIDPPSSSSFETKEPPELDISELLIWPDGFEYNVEEFTEADCDHLFEEASRL 296
           I   +EI SID  + S FET+  PE D+SE+L+             EA+ DHL E A+ +
Sbjct: 241 IKGDAEIVSIDTQTFSPFETEASPEFDVSEMLM-------------EANNDHLIEGAAEI 300

[Close]

BLAST of Lsi05G003740 vs. NCBI nr
Match: XP_038877825.1 (agamous-like MADS-box protein MADS1 [Benincasa hispida])

HSP 1 Score: 290.0 bits (741), Expect = 2.4e-74
Identity = 159/203 (78.33%), Postives = 171/203 (84.24%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           MGRG LSLKLIPNLKSRRTTF+KRKKSLMKKAYELSTLCDVQTCVFIASDCDPST FETW
Sbjct: 1   MGRGTLSLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60

Query: 61  PQNHDQIQAMIRSYKSHSFPK-QSRNSSYDLQQFFSDRKNKIVTETSKLRQNVDKFKDPH 120
           P NHDQI AMIRSYKS SFPK  SRNSSY+L+QFFSDRKNKI+T+TSKLR NV+   D H
Sbjct: 61  PPNHDQINAMIRSYKSRSFPKHSSRNSSYNLKQFFSDRKNKILTDTSKLRHNVE---DHH 120

Query: 121 LDSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHLIEEASGISSINIPPFSPFETEEP 180
           LDSLSE QLKELLA LDSKIG ADGMIQFM+ADYDHLIE+A G+ ++      P ETEEP
Sbjct: 121 LDSLSEHQLKELLATLDSKIGVADGMIQFMDADYDHLIEQAFGMDTL------PSETEEP 180

Query: 181 -PKLDIPESLIEPYGFEYNVEKF 202
             + DI E LIEP  FEYNVE F
Sbjct: 181 TTECDISEFLIEPDEFEYNVEGF 194

[Close]

BLAST of Lsi05G003740 vs. NCBI nr
Match: XP_023526169.1 (agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.2 bits (731), Expect = 3.5e-73
Identity = 181/329 (55.02%), Postives = 212/329 (64.44%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           MGRG LSLKLI N KSRRTTF KRKKSLMKKAYELSTLCDVQTCV IASD     +F+TW
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASD-----EFQTW 60

Query: 61  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNVDKFKDPH- 120
           P + +Q++AMIRSYKS SF K S  SSYDL QFFSDRKNKIVTETSKLR  V K KD + 
Sbjct: 61  PSDRNQVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNS 120

Query: 121 ---LDSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHLIEEASGISSINIPPFSPFET 180
              LDSLSE QLK LLA LDSKIG AD MI+FMEADYD+LIE A  ISSI+    SP ET
Sbjct: 121 DHCLDSLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLET 180

Query: 181 EEPPKLDIPESLIE----------------------PYGFEYNV-----EKFMEADYDHL 240
           E  PKL+I E  +E                      P+  E +      E FME++YD L
Sbjct: 181 EASPKLNISELDMEANYDHLIGGDTEILSVDTQTFSPFETELSTEFDVSEMFMESNYDPL 240

Query: 241 IVEASEISSIDPPSSSSFETKEPPELDISELLIWPDGFEYNVEEFTEADCDHLFEEASRL 299
           I   +EI SID  + S FET+   E D+SE+             F E++ D+L E A+ +
Sbjct: 241 IEGDAEIVSIDTQTFSPFETELSTEFDVSEM-------------FMESNYDNLIEGAAEI 300

[Close]

BLAST of Lsi05G003740 vs. TAIR 10
Match: AT5G58890.1 (AGAMOUS-like 82 )

HSP 1 Score: 73.6 bits (179), Expect = 3.3e-13
Identity = 66/260 (25.38%), Postives = 121/260 (46.54%), Query Frame = 0


Query: 5   ILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPS----TQFETW 64
           ++ L+ I N K+R TT+ KRK SL KKA E STLC V+TC+ +      +    ++ E W
Sbjct: 5   VVDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIW 64

Query: 65  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSD--RKNKIVTETSKLRQNVDKFKDP 124
           P++  +++A+IR YK       S     +++ F +D  + N++VT+    R+N     + 
Sbjct: 65  PKDETKVRAIIRKYK--DTVSTSCRKETNVETFVNDVGKGNEVVTKKRVKRENKYSSWEE 124

Query: 125 HLDSLSEQQLKELLAALDSKIGDADGMIQFMEADYDHLIEEASGISSINIPPFSPFETEE 184
            LD  S +QL  +  A+DSK+ +A    +      +H   +     ++    F P    E
Sbjct: 125 KLDKCSREQLHGIFCAVDSKLNEAVTRQERSMFRVNHQAMDTPFPQNLMDQQFMPQYFHE 184

Query: 185 PPKL--------DIPESLIEPYGFEYNVEKFMEADYDHLIVEASEISSIDPPSSSSFETK 244
            P+         ++  SLI P+  +  ++  +   +  L +  S + S     +   + +
Sbjct: 185 QPQFQGFPNNFNNMGFSLISPHDGQIQMDPNLMEKWTDLALTQSLMMSKGNDGTQFMQRQ 244

Query: 245 EPPELDISELLIWPDGFEYN 251
           E P  +  +++    GF  N
Sbjct: 245 EQPYYNREQVVSRSAGFNVN 262

[Close]

BLAST of Lsi05G003740 vs. TAIR 10
Match: AT3G18650.1 (AGAMOUS-like 103 )

HSP 1 Score: 60.1 bits (144), Expect = 3.8e-09
Identity = 43/132 (32.58%), Postives = 72/132 (54.55%), Query Frame = 0


Query: 16  SRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETWPQNHDQIQAMIRSYK 75
           SR T+ +KR++++ KKA ELS LCD+  CV        + + +TWP+  ++++A+ R Y 
Sbjct: 31  SRATSLIKRQQTVFKKAKELSILCDIDVCVICYGS---NGELKTWPEEREKVKAIARRYG 90

Query: 76  SHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLR----QNVDKFK----DPHLDSLSEQQ 135
             S  K+ R  S DL +F  ++ NK   E  + +    + V K K    DP  D+ S +Q
Sbjct: 91  ELSETKR-RKGSVDLHEFL-EKMNKDDPEKEEKKKIKVRRVPKVKYPVWDPRFDNYSVEQ 150

Query: 136 LKELLAALDSKI 140
           L  L+ +L+  +
Sbjct: 151 LMGLVQSLERNL 157

[Close]

BLAST of Lsi05G003740 vs. TAIR 10
Match: AT4G09960.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-08
Identity = 41/135 (30.37%), Postives = 70/135 (51.85%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  + +      ST+   +
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-----STRGRLY 60

Query: 61  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNVDKFKDPHL 120
              ++ I++ I  YK       + ++  ++   +  +      E++KLRQ +   ++ + 
Sbjct: 61  EYANNNIRSTIERYKKACSDSTNTSTVQEINAAYYQQ------ESAKLRQQIQTIQNSNR 120

Query: 121 ----DSLSEQQLKEL 132
               DSLS   +KEL
Sbjct: 121 NLMGDSLSSLSVKEL 124

[Close]

BLAST of Lsi05G003740 vs. TAIR 10
Match: AT4G09960.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-08
Identity = 41/135 (30.37%), Postives = 70/135 (51.85%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  + +      ST+   +
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-----STRGRLY 60

Query: 61  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNVDKFKDPHL 120
              ++ I++ I  YK       + ++  ++   +  +      E++KLRQ +   ++ + 
Sbjct: 61  EYANNNIRSTIERYKKACSDSTNTSTVQEINAAYYQQ------ESAKLRQQIQTIQNSNR 120

Query: 121 ----DSLSEQQLKEL 132
               DSLS   +KEL
Sbjct: 121 NLMGDSLSSLSVKEL 124

[Close]

BLAST of Lsi05G003740 vs. TAIR 10
Match: AT4G09960.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-08
Identity = 41/135 (30.37%), Postives = 70/135 (51.85%), Query Frame = 0


Query: 1   MGRGILSLKLIPNLKSRRTTFLKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTQFETW 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  + +      ST+   +
Sbjct: 27  MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-----STRGRLY 86

Query: 61  PQNHDQIQAMIRSYKSHSFPKQSRNSSYDLQQFFSDRKNKIVTETSKLRQNVDKFKDPHL 120
              ++ I++ I  YK       + ++  ++   +  +      E++KLRQ +   ++ + 
Sbjct: 87  EYANNNIRSTIERYKKACSDSTNTSTVQEINAAYYQQ------ESAKLRQQIQTIQNSNR 146

Query: 121 ----DSLSEQQLKEL 132
               DSLS   +KEL
Sbjct: 147 NLMGDSLSSLSVKEL 150

The following BLAST results are available for this feature:

BLAST of Lsi05G003740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIM0	4.7e-12	25.38	Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=...	[more]
Q40872	6.3e-09	29.30	Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1	[more]
Q9LSB2	5.4e-08	32.58	Agamous-like MADS-box protein AGL103 OS=Arabidopsis thaliana OX=3702 GN=AGL103 P...	[more]
F6I457	5.4e-08	29.29	Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=2 SV=...	[more]
A0A217EJJ0	5.4e-08	29.29	Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=3 SV=...	[more]

BLAST of Lsi05G003740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F370	1.4e-72	57.76	agamous-like MADS-box protein AGL6 OS=Cucurbita moschata OX=3662 GN=LOC111441717...	[more]
A0A0A0LAL9	4.1e-59	62.95	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE...	[more]
A0A6J1F4C8	2.1e-31	43.48	agamous-like MADS-box protein AGL14 OS=Cucurbita moschata OX=3662 GN=LOC11144227...	[more]
A0A6J1J5U6	4.4e-29	46.12	agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 ...	[more]
A0A6J1CQM2	9.1e-27	42.99	uncharacterized protein LOC111013282 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Lsi05G003740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887166.1	2.3e-117	67.30	MADS-box protein SVP-like [Benincasa hispida]	[more]
KAG7017922.1	3.4e-76	55.83	Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6581182.1	5.8e-76	55.52	Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_038877825.1	2.4e-74	78.33	agamous-like MADS-box protein MADS1 [Benincasa hispida]	[more]
XP_023526169.1	3.5e-73	55.02	agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi05G003740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58890.1	3.3e-13	25.38	AGAMOUS-like 82	[more]
AT3G18650.1	3.8e-09	32.58	AGAMOUS-like 103	[more]
AT4G09960.2	1.9e-08	30.37	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.1	1.9e-08	30.37	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.3	1.9e-08	30.37	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 40.64 coord: 23..38 score: 65.84 coord: 38..59 score: 23.67
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 3.1E-16 score: 69.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..50 e-value: 2.5E-15 score: 55.7
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 18.039576
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 14..131 e-value: 4.5E-18 score: 67.1
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..89
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 3..170
None	No IPR available	PANTHER	PTHR11945:SF176	AGAMOUS-LIKE MADS-BOX PROTEIN AGL82	coord: 3..170
IPR033897	MADS SRF-like	CDD	cd00266	MADS_SRF_like	coord: 2..87 e-value: 9.23669E-20 score: 80.3819

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G003740.1	Lsi05G003740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding