Lsi05G002490 (gene) Bottle gourd (USVL1VR-Ls) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTATGAGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTGGGCAAAATGCACAGAGTAACGGTGGCCCAGATTTGGAGGACTCTGAGATAAAGCCGCTTTATTCTCTCTTCCCGCTGAGAAGACATGGAAGAACCAAGAACAACAACCACCACCACCACCACCACCACCACCATCGCCAAATTTCTTACTCTTTTCTTCCAAAATCTCCATTAACAAACATCTCCACCGCCTACAAGATCCAAAAACCACCCTCTTTCTCCGACAATACTATGCTCTTCACCAACACCAGGTACATCTTTCCAATAGGTTTTTCCTTTTTCTTTTCTATTACCTTCTTCTATTTCTGCTAGATTCTCTTTGTTTCTTGTAAATTCGCGCGGAAAGGGAAATGGAGTTTCGGAAGCTAATACATTGTCTTGTTCTTTTCTTCAAATGCTTACCTCCTTAATTGCATTTGTTTCTTCTCTTTCCTTTTTCCTACTTTACCGTTTTGTTTGCTTAACTTTCGGAGATAGAGGCGTAATGATTCGGGACTTCTTTTTCTTTTTCTTTTTTTTTTTTCTTTTCCTTCTTTCAACTTGCTGTCTCTCCTTCTTGAAGTATTACAACGGGGACTAACCTTTTATCTTGAAGAATTTCATTGCTAAAACCGATTTTATGAAGTTGAGCTTAGTTTTTTCCCCTTGGAAGCTTTGTTTCACGTAATTGAAGTTATTTGTGAGTTTGGACGTGCAAATTTCTGAGGTAGGAGTTTGAGTGCGAGCCAACCTCAGCTGAGGTTATGGCTGGCCATTTGTAACTCCCGTCGAGCCTCGCCATCCTTTTTTTTTTTTTCCCCTTTTGCAATGTAATGTTCTTAAATTATGAATTTAAATTTTTAGAAATGGAGTTGGGAGTACGAAATTTCGTGGTAGGATTACACTTATGTTAATACGTACGTTCCGTTTCTCAATTGCAGACCCACTAGATATTCAAACTCTTGAACATCATTTTTTTTTTTTGGTGTTTGCTTGTTTTAAATAATGGAATTTAATACCCATCTACAGTTCGAGGTGGTTACTTTTTTTTTTTTTTTTTTGTAGAGTTATATACTGATATCTTCCAATTTCATTCCCACAACTTGGATAGTGTTGAATGGCTATTTTGGTCACCGTTATGTGTAATGAGAATTGACATTATGAATACTGGAAAGGGAACAAATTGGATATTAACATGTGTTGTTACACTATAGTATTCAATGGATTTGCTGATTAGTACCGTAGACATTCGTTCTTTTAGATGGTCTGATCAGGTTTGAATTGCCGTAGATGATTATGAGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTGGGCAAAATGCACAGAGTAACGGTGGCCCAGATTTGGAGGACTCTGAGATAAAGCCGCTTTATTCTCTCTTCCCGCTGAGAAGACATGGAAGAACCAAGAACAACAACCACCACCACCACCACCACCACCACCATCGCCAAATTTCTTACTCTTTTCTTCCAAAATCTCCATTAACAAACATCTCCACCGCCTACAAGATCCAAAAACCACCCTCTTTCTCCGACAATACTATGCTCTTCACCAACACCAGAAATGGAGTTGGGAGTACGAAATTTCGTGGTAGGATTACACTTATGTTAATACATGGTCTGATCAGGTTTGAATTGCCGTAG ATGATTATGAGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTGGGCAAAATGCACAGAGTAACGGTGGCCCAGATTTGGAGGACTCTGAGATAAAGCCGCTTTATTCTCTCTTCCCGCTGAGAAGACATGGAAGAACCAAGAACAACAACCACCACCACCACCACCACCACCACCATCGCCAAATTTCTTACTCTTTTCTTCCAAAATCTCCATTAACAAACATCTCCACCGCCTACAAGATCCAAAAACCACCCTCTTTCTCCGACAATACTATGCTCTTCACCAACACCAGAAATGGAGTTGGGAGTACGAAATTTCGTGGTAGGATTACACTTATGTTAATACATGGTCTGATCAGGTTTGAATTGCCGTAG MIMSGGSGRQTVRVKAGQNAQSNGGPDLEDSEIKPLYSLFPLRRHGRTKNNNHHHHHHHHHRQISYSFLPKSPLTNISTAYKIQKPPSFSDNTMLFTNTRNGVGSTKFRGRITLMLIHGLIRFELP Homology
BLAST of Lsi05G002490 vs. ExPASy TrEMBL
Match: A0A0A0LBT3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G198500 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.5e-12 Identity = 41/49 (83.67%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of Lsi05G002490 vs. ExPASy TrEMBL
Match: A0A6J1D7M5 (homeobox protein HAT3.1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017765 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.7e-08 Identity = 36/47 (76.60%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of Lsi05G002490 vs. NCBI nr
Match: KGN57486.1 (hypothetical protein Csa_010932 [Cucumis sativus]) HSP 1 Score: 82.4 bits (202), Expect = 3.0e-12 Identity = 41/49 (83.67%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of Lsi05G002490 vs. NCBI nr
Match: XP_022149327.1 (homeobox protein HAT3.1 isoform X2 [Momordica charantia]) HSP 1 Score: 67.8 bits (164), Expect = 7.7e-08 Identity = 36/47 (76.60%), Postives = 38/47 (80.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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