Lsi05G002460 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G002460
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	zinc finger protein 7-like
Location	chr05: 3199666 .. 3200271 (+)
RNA-Seq Expression	Lsi05G002460
Synteny	Lsi05G002460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTTTCAAGGAGAACAAATTGAATCCTTGAAAGAGAACAAAGGACAAGATGAATCAAATAAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGCAAGAGACCAACCTGATGGTGTTGGAGCTTTGGAGTGGCTGAACTTGAGCTTGGGAAGGAACAAACAGCTTTTAACTGAATCACAAAGATCTGCAGCTTCAGCCAAGACTTTTTCATGCAACTTCTGTAAGAGAGTATTCTACAGTTCACAAGCATTGGGAGGCCATCAAAATGCCCACAAGAGAGAGAGAAGTGCAGCCAGAAGACACCAAGCCCACAGAATGATGACTCTGCTTGGTCTTCCAATTCATAATTCTATGGTTAGATCACTTGGTGTTCAACCACATTCACTGGTGCACAAACCAGGCAGGGAAGACACTGCAGTAGTAGCAAGATTTAATCATGTCAAAACTAGTTCATGGGCACCTTTTATGCTGGGGGATGCCATGGACTTCATGTGGCCAGGAAGCTTCCGCTTCACTCAACATCAAATTCTCCCAGAGCCACCACCAACGCGAGAACTGCCGATGGAACCGTTCAAGCTCGATCTGAATCTCCGACTTTAA

mRNA sequence

ATGATTTTTCAAGGAGAACAAATTGAATCCTTGAAAGAGAACAAAGGACAAGATGAATCAAATAAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGCAAGAGACCAACCTGATGGTGTTGGAGCTTTGGAGTGGCTGAACTTGAGCTTGGGAAGGAACAAACAGCTTTTAACTGAATCACAAAGATCTGCAGCTTCAGCCAAGACTTTTTCATGCAACTTCTGTAAGAGAGTATTCTACAGTTCACAAGCATTGGGAGGCCATCAAAATGCCCACAAGAGAGAGAGAAGTGCAGCCAGAAGACACCAAGCCCACAGAATGATGACTCTGCTTGGTCTTCCAATTCATAATTCTATGGTTAGATCACTTGGTGTTCAACCACATTCACTGGTGCACAAACCAGGCAGGGAAGACACTGCAGTAGTAGCAAGATTTAATCATGTCAAAACTAGTTCATGGGCACCTTTTATGCTGGGGGATGCCATGGACTTCATGTGGCCAGGAAGCTTCCGCTTCACTCAACATCAAATTCTCCCAGAGCCACCACCAACGCGAGAACTGCCGATGGAACCGTTCAAGCTCGATCTGAATCTCCGACTTTAA

Coding sequence (CDS)

ATGATTTTTCAAGGAGAACAAATTGAATCCTTGAAAGAGAACAAAGGACAAGATGAATCAAATAAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGCAAGAGACCAACCTGATGGTGTTGGAGCTTTGGAGTGGCTGAACTTGAGCTTGGGAAGGAACAAACAGCTTTTAACTGAATCACAAAGATCTGCAGCTTCAGCCAAGACTTTTTCATGCAACTTCTGTAAGAGAGTATTCTACAGTTCACAAGCATTGGGAGGCCATCAAAATGCCCACAAGAGAGAGAGAAGTGCAGCCAGAAGACACCAAGCCCACAGAATGATGACTCTGCTTGGTCTTCCAATTCATAATTCTATGGTTAGATCACTTGGTGTTCAACCACATTCACTGGTGCACAAACCAGGCAGGGAAGACACTGCAGTAGTAGCAAGATTTAATCATGTCAAAACTAGTTCATGGGCACCTTTTATGCTGGGGGATGCCATGGACTTCATGTGGCCAGGAAGCTTCCGCTTCACTCAACATCAAATTCTCCCAGAGCCACCACCAACGCGAGAACTGCCGATGGAACCGTTCAAGCTCGATCTGAATCTCCGACTTTAA

Protein sequence

MIFQGEQIESLKENKGQDESNKEEEGEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTESQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKTSSWAPFMLGDAMDFMWPGSFRFTQHQILPEPPPTRELPMEPFKLDLNLRL

Homology

[Close]

BLAST of Lsi05G002460 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 2.8e-15
Identity = 55/154 (35.71%), Postives = 76/154 (49.35%), Query Frame = 0


Query: 60  ESQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQ--------------- 119
           + Q+ + S + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R                 
Sbjct: 74  QQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSS 133

Query: 120 ----AHRMMTLLGLPIHNS------MVRSLGVQPHSLVHKPG----REDTAV--VARFNH 179
               A     L  LP+H S        R+LG++ HS  H         +T +  +ARFN 
Sbjct: 134 NYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQ 193

Query: 180 VKTSSWAPFML-GDAMDFMWPGSFRFTQHQILPE 182
               +  PF +  D  + +WPGSFR   + +  E
Sbjct: 194 GYFGNCIPFYVEDDEAEMLWPGSFRQATNAVAVE 227

[Close]

BLAST of Lsi05G002460 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.8e-15
Identity = 51/119 (42.86%), Postives = 67/119 (56.30%), Query Frame = 0


Query: 59  TESQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIHN 118
           T+S +  A+ + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R      M       + 
Sbjct: 47  TKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYT 106

Query: 119 SMVRSLGVQPHS-LVHKPGREDTAVVARFNHV-KTSSWAPFML---GDAMDFMWPGSFR 173
               SLG+Q HS L+H    +   +V+RF+H     +  P          DF WPGSFR
Sbjct: 107 YTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFR 165

[Close]

BLAST of Lsi05G002460 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-14
Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 62  QRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRM------------- 121
           Q   A  + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R Q ++M             
Sbjct: 59  QEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFG 118

Query: 122 -------MTLLGLPIHNSMVR--SLGVQPHSLVHKP---GREDTAV 143
                   ++  LP+H S+    +LG+Q HS +HKP   GR+ T++
Sbjct: 119 HGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSL 164

[Close]

BLAST of Lsi05G002460 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 48/130 (36.92%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 17  QDESNKEEEGEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTESQRSAASAKTFSCNFC 76
           QD  N+  E EE +   +  + + +  ++        +   +     ++   K FSCN+C
Sbjct: 15  QDSLNQSIEDEERDVHNSSHELNLIDCID--------DTTSIVNESTTSTEQKLFSCNYC 74

Query: 77  KRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLG----------LPIHN--SMVRSL 135
           +R FYSSQALGGHQNAHKRER+ A+R Q  RM               LP H   +  RSL
Sbjct: 75  QRTFYSSQALGGHQNAHKRERTLAKRGQ--RMAASASAFGHPYGFSPLPFHGQYNNHRSL 134

[Close]

BLAST of Lsi05G002460 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.5e-08
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 61  SQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRH 104
           S    AS + F C +C R FY+SQALGGHQNAHKRER+AARR+
Sbjct: 28  SSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRN 70

[Close]

BLAST of Lsi05G002460 vs. ExPASy TrEMBL
Match: A0A5A7T338 (Zinc finger protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001110 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.4e-95
Identity = 185/209 (88.52%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNKEEEGEEEE-------EEEARDQPDGVGALEWLNLSLGR 60
           MIFQGEQIES KENKGQDESN+EEE EEEE       EEEARDQPDGVGALEWL+LSLGR
Sbjct: 1   MIFQGEQIESFKENKGQDESNEEEEEEEEELDEEAELEEEARDQPDGVGALEWLSLSLGR 60

Query: 61  NKQLLTESQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLG 120
           NKQ L +SQRSAAS KTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQAH+MMTLLG
Sbjct: 61  NKQPLNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG 120

Query: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKTSSW-APFMLGDAMDFMWPGSFR 180
           LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVK  SW APFMLGDA DFMWPGSFR
Sbjct: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDATDFMWPGSFR 180

Query: 181 FTQHQILPEPPPTRELPMEPFKLDLNLRL 202
           F QHQILPEPPP RE PMEPFKLDLNLRL
Sbjct: 181 FAQHQILPEPPPPREPPMEPFKLDLNLRL 209

[Close]

BLAST of Lsi05G002460 vs. ExPASy TrEMBL
Match: A0A1S3C410 (zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103496238 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.4e-95
Identity = 185/209 (88.52%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNKEEEGEEEE-------EEEARDQPDGVGALEWLNLSLGR 60
           MIFQGEQIES KENKGQDESN+EEE EEEE       EEEARDQPDGVGALEWL+LSLGR
Sbjct: 1   MIFQGEQIESFKENKGQDESNEEEEEEEEELDEEAELEEEARDQPDGVGALEWLSLSLGR 60

Query: 61  NKQLLTESQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLG 120
           NKQ L +SQRSAAS KTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQAH+MMTLLG
Sbjct: 61  NKQPLNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG 120

Query: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKTSSW-APFMLGDAMDFMWPGSFR 180
           LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVK  SW APFMLGDA DFMWPGSFR
Sbjct: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDATDFMWPGSFR 180

Query: 181 FTQHQILPEPPPTRELPMEPFKLDLNLRL 202
           F QHQILPEPPP RE PMEPFKLDLNLRL
Sbjct: 181 FAQHQILPEPPPPREPPMEPFKLDLNLRL 209

[Close]

BLAST of Lsi05G002460 vs. ExPASy TrEMBL
Match: A0A0A0L948 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G199020 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.9e-94
Identity = 183/205 (89.27%), Postives = 190/205 (92.68%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNKEEEGEEEEE---EEARDQPDGVGALEWLNLSLGRNKQL 60
           MIFQGEQIES KENKGQDESN+EEE E +EE   EEARDQPDGVGALEWL+LSLGRNKQ 
Sbjct: 1   MIFQGEQIESFKENKGQDESNEEEEAELDEEAELEEARDQPDGVGALEWLSLSLGRNKQP 60

Query: 61  LTESQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIH 120
           L +SQRSAAS KTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQAH+MMTLLGLPIH
Sbjct: 61  LNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIH 120

Query: 121 NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKTSSW-APFMLGDAMDFMWPGSFRFTQH 180
           NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVK  SW APFMLGDAMDFMWPGSFRF QH
Sbjct: 121 NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDAMDFMWPGSFRFAQH 180

Query: 181 QILPEPPPTRELPMEPFKLDLNLRL 202
           QILPEPPP RE PMEPFKLDL+LRL
Sbjct: 181 QILPEPPPPREPPMEPFKLDLSLRL 205

[Close]

BLAST of Lsi05G002460 vs. ExPASy TrEMBL
Match: A0A6J1E569 (zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430693 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.8e-92
Identity = 178/201 (88.56%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNKEEEGEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTE 60
           MIFQGEQIESLKE KG++ES +EEE EEEEEEEA DQP+GVGALEWLNLSLGRNKQLLTE
Sbjct: 1   MIFQGEQIESLKEKKGENESVEEEEEEEEEEEEATDQPEGVGALEWLNLSLGRNKQLLTE 60

Query: 61  SQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIHNSM 120
           SQ SA SAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQA RMMTLLGLPIHNSM
Sbjct: 61  SQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSM 120

Query: 121 VRSLGVQPHSLVHKPGREDTAVVARFNHVKTSSWAPFMLGDAMDFMWPGSFRFTQHQILP 180
           VRSLGVQPHSLVHK  REDTA+VARFNHVK+ SWAPFMLGDAMD  WPGSFRFTQHQ+LP
Sbjct: 121 VRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLP 180

Query: 181 EPPPTRELPMEPFKLDLNLRL 202
           E PP RE  MEPFKLDLNLRL
Sbjct: 181 ESPPLREPQMEPFKLDLNLRL 201

[Close]

BLAST of Lsi05G002460 vs. ExPASy TrEMBL
Match: A0A6J1J9Y6 (zinc finger protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111482624 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.1e-89
Identity = 175/202 (86.63%), Postives = 182/202 (90.10%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDES-NKEEEGEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLT 60
           MIFQGEQIESLKE KG+DES  +EEE EEEEEEEA DQP GVGALEWLNLSLGRNKQLL 
Sbjct: 1   MIFQGEQIESLKEKKGEDESVEEEEEEEEEEEEEATDQPAGVGALEWLNLSLGRNKQLLP 60

Query: 61  ESQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIHNS 120
           ESQ SA SAKTFSCNFCKRVF+SSQALGGHQNAHKRERSAARRHQA RMMTLLGLP+HNS
Sbjct: 61  ESQSSAGSAKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPMHNS 120

Query: 121 MVRSLGVQPHSLVHKPGREDTAVVARFNHVKTSSWAPFMLGDAMDFMWPGSFRFTQHQIL 180
           MVRSLGVQPHSLVHK  REDTA+VARFNHVK+ SWAPFMLG AMD  WPGSFRFTQHQ+L
Sbjct: 121 MVRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGGAMDLRWPGSFRFTQHQVL 180

Query: 181 PEPPPTRELPMEPFKLDLNLRL 202
           PE PP RE  MEPFKLDLNLRL
Sbjct: 181 PESPPLREPQMEPFKLDLNLRL 202

[Close]

BLAST of Lsi05G002460 vs. NCBI nr
Match: XP_038876126.1 (zinc finger protein 7-like [Benincasa hispida])

HSP 1 Score: 371.7 bits (953), Expect = 4.0e-99
Identity = 189/201 (94.03%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNKEEEGEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTE 60
           MIFQGEQIESLKENKGQDESN       EEEEEA DQPDGVGALEWLNLSLGRNKQLLTE
Sbjct: 1   MIFQGEQIESLKENKGQDESN-------EEEEEATDQPDGVGALEWLNLSLGRNKQLLTE 60

Query: 61  SQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIHNSM 120
           SQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIHNSM
Sbjct: 61  SQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIHNSM 120

Query: 121 VRSLGVQPHSLVHKPGREDTAVVARFNHVKTSSWAPFMLGDAMDFMWPGSFRFTQHQILP 180
           VRSLGVQPHSLVHKPGREDTAVVARFNH+KTSSWAPFMLGDAMDFMWPGSFRF QHQILP
Sbjct: 121 VRSLGVQPHSLVHKPGREDTAVVARFNHIKTSSWAPFMLGDAMDFMWPGSFRFAQHQILP 180

Query: 181 EPPPTRELPMEPFKLDLNLRL 202
           EPPP RE PMEPFKLDLNLRL
Sbjct: 181 EPPPPREPPMEPFKLDLNLRL 194

[Close]

BLAST of Lsi05G002460 vs. NCBI nr
Match: XP_008456235.1 (PREDICTED: zinc finger protein 7-like [Cucumis melo] >KAA0037198.1 zinc finger protein 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-94
Identity = 185/209 (88.52%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNKEEEGEEEE-------EEEARDQPDGVGALEWLNLSLGR 60
           MIFQGEQIES KENKGQDESN+EEE EEEE       EEEARDQPDGVGALEWL+LSLGR
Sbjct: 1   MIFQGEQIESFKENKGQDESNEEEEEEEEELDEEAELEEEARDQPDGVGALEWLSLSLGR 60

Query: 61  NKQLLTESQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLG 120
           NKQ L +SQRSAAS KTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQAH+MMTLLG
Sbjct: 61  NKQPLNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLG 120

Query: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKTSSW-APFMLGDAMDFMWPGSFR 180
           LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVK  SW APFMLGDA DFMWPGSFR
Sbjct: 121 LPIHNSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDATDFMWPGSFR 180

Query: 181 FTQHQILPEPPPTRELPMEPFKLDLNLRL 202
           F QHQILPEPPP RE PMEPFKLDLNLRL
Sbjct: 181 FAQHQILPEPPPPREPPMEPFKLDLNLRL 209

[Close]

BLAST of Lsi05G002460 vs. NCBI nr
Match: XP_011651233.1 (zinc finger protein 7 [Cucumis sativus] >KGN57489.1 hypothetical protein Csa_010876 [Cucumis sativus])

HSP 1 Score: 355.1 bits (910), Expect = 3.9e-94
Identity = 183/205 (89.27%), Postives = 190/205 (92.68%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNKEEEGEEEEE---EEARDQPDGVGALEWLNLSLGRNKQL 60
           MIFQGEQIES KENKGQDESN+EEE E +EE   EEARDQPDGVGALEWL+LSLGRNKQ 
Sbjct: 1   MIFQGEQIESFKENKGQDESNEEEEAELDEEAELEEARDQPDGVGALEWLSLSLGRNKQP 60

Query: 61  LTESQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIH 120
           L +SQRSAAS KTFSCNFCKR+FYSSQALGGHQNAHKRERSAARRHQAH+MMTLLGLPIH
Sbjct: 61  LNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIH 120

Query: 121 NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKTSSW-APFMLGDAMDFMWPGSFRFTQH 180
           NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVK  SW APFMLGDAMDFMWPGSFRF QH
Sbjct: 121 NSMVRSLGVQPHSLVHKPGREDTAVVARFNHVKNGSWAAPFMLGDAMDFMWPGSFRFAQH 180

Query: 181 QILPEPPPTRELPMEPFKLDLNLRL 202
           QILPEPPP RE PMEPFKLDL+LRL
Sbjct: 181 QILPEPPPPREPPMEPFKLDLSLRL 205

[Close]

BLAST of Lsi05G002460 vs. NCBI nr
Match: XP_022922826.1 (zinc finger protein 4-like [Cucurbita moschata])

HSP 1 Score: 348.6 bits (893), Expect = 3.6e-92
Identity = 178/201 (88.56%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNKEEEGEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTE 60
           MIFQGEQIESLKE KG++ES +EEE EEEEEEEA DQP+GVGALEWLNLSLGRNKQLLTE
Sbjct: 1   MIFQGEQIESLKEKKGENESVEEEEEEEEEEEEATDQPEGVGALEWLNLSLGRNKQLLTE 60

Query: 61  SQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIHNSM 120
           SQ SA SAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQA RMMTLLGLPIHNSM
Sbjct: 61  SQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSM 120

Query: 121 VRSLGVQPHSLVHKPGREDTAVVARFNHVKTSSWAPFMLGDAMDFMWPGSFRFTQHQILP 180
           VRSLGVQPHSLVHK  REDTA+VARFNHVK+ SWAPFMLGDAMD  WPGSFRFTQHQ+LP
Sbjct: 121 VRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLP 180

Query: 181 EPPPTRELPMEPFKLDLNLRL 202
           E PP RE  MEPFKLDLNLRL
Sbjct: 181 ESPPLREPQMEPFKLDLNLRL 201

[Close]

BLAST of Lsi05G002460 vs. NCBI nr
Match: XP_023551737.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >KAG7014956.1 Zinc finger protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 342.4 bits (877), Expect = 2.6e-90
Identity = 176/201 (87.56%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 1   MIFQGEQIESLKENKGQDESNKEEEGEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTE 60
           MIFQGEQIESLKE KG+DES +    EEEEEEEA DQP+GVGALEWLNLSLGRNKQLLTE
Sbjct: 1   MIFQGEQIESLKEKKGEDESVE----EEEEEEEATDQPEGVGALEWLNLSLGRNKQLLTE 60

Query: 61  SQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIHNSM 120
           SQ SA SAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQA RMMTLLGLPIHNSM
Sbjct: 61  SQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSM 120

Query: 121 VRSLGVQPHSLVHKPGREDTAVVARFNHVKTSSWAPFMLGDAMDFMWPGSFRFTQHQILP 180
           VRSLGVQPHSLVHK  REDTA+VARFNHVK+ SWAPFMLGDAMD  WPGSFRFTQHQ+LP
Sbjct: 121 VRSLGVQPHSLVHKTSREDTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLP 180

Query: 181 EPPPTRELPMEPFKLDLNLRL 202
           E PP RE  MEPFKLDLNLRL
Sbjct: 181 ESPPLREPQMEPFKLDLNLRL 197

[Close]

BLAST of Lsi05G002460 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 83.6 bits (205), Expect = 2.0e-16
Identity = 55/154 (35.71%), Postives = 76/154 (49.35%), Query Frame = 0


Query: 60  ESQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQ--------------- 119
           + Q+ + S + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R                 
Sbjct: 74  QQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSS 133

Query: 120 ----AHRMMTLLGLPIHNS------MVRSLGVQPHSLVHKPG----REDTAV--VARFNH 179
               A     L  LP+H S        R+LG++ HS  H         +T +  +ARFN 
Sbjct: 134 NYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQ 193

Query: 180 VKTSSWAPFML-GDAMDFMWPGSFRFTQHQILPE 182
               +  PF +  D  + +WPGSFR   + +  E
Sbjct: 194 GYFGNCIPFYVEDDEAEMLWPGSFRQATNAVAVE 227

[Close]

BLAST of Lsi05G002460 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 83.6 bits (205), Expect = 2.0e-16
Identity = 51/119 (42.86%), Postives = 67/119 (56.30%), Query Frame = 0


Query: 59  TESQRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIHN 118
           T+S +  A+ + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R      M       + 
Sbjct: 47  TKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYT 106

Query: 119 SMVRSLGVQPHS-LVHKPGREDTAVVARFNHV-KTSSWAPFML---GDAMDFMWPGSFR 173
               SLG+Q HS L+H    +   +V+RF+H     +  P          DF WPGSFR
Sbjct: 107 YTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFR 165

[Close]

BLAST of Lsi05G002460 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-15
Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 62  QRSAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRM------------- 121
           Q   A  + FSCN+C+R FYSSQALGGHQNAHKRER+ A+R Q ++M             
Sbjct: 59  QEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFG 118

Query: 122 -------MTLLGLPIHNSMVR--SLGVQPHSLVHKP---GREDTAV 143
                   ++  LP+H S+    +LG+Q HS +HKP   GR+ T++
Sbjct: 119 HGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSL 164

[Close]

BLAST of Lsi05G002460 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 3.8e-15
Identity = 48/130 (36.92%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 64  SAASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLG-------LPI 123
           ++   K FSCN+C+R FYSSQALGGHQNAHKRER+ A+R Q        G       +P 
Sbjct: 97  TSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAPVPF 156

Query: 124 HNSMV-RSLGVQPHSLVHKPGREDTAVVARFNHVKTSSWAPFMLGDAMDFMWPGSFRFTQ 183
           H     R+LG+Q HS+ HKP   +      +  +  S   P +   A+  +      +  
Sbjct: 157 HGQYSNRTLGIQAHSMSHKPSSYN-VYGGEYGQINWSR-IPLVQQPAIAKLTSTENHYNH 216

Query: 184 HQILPEPPPT 186
           HQ++  PP T
Sbjct: 217 HQMMIAPPLT 224

[Close]

BLAST of Lsi05G002460 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-10
Identity = 48/130 (36.92%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 17  QDESNKEEEGEEEEEEEARDQPDGVGALEWLNLSLGRNKQLLTESQRSAASAKTFSCNFC 76
           QD  N+  E EE +   +  + + +  ++        +   +     ++   K FSCN+C
Sbjct: 15  QDSLNQSIEDEERDVHNSSHELNLIDCID--------DTTSIVNESTTSTEQKLFSCNYC 74

Query: 77  KRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLG----------LPIHN--SMVRSL 135
           +R FYSSQALGGHQNAHKRER+ A+R Q  RM               LP H   +  RSL
Sbjct: 75  QRTFYSSQALGGHQNAHKRERTLAKRGQ--RMAASASAFGHPYGFSPLPFHGQYNNHRSL 134

The following BLAST results are available for this feature:

BLAST of Lsi05G002460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39263	2.8e-15	35.71	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39266	2.8e-15	42.86	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q42485	3.1e-14	42.45	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39262	2.3e-09	36.92	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q9FFX4	7.5e-08	65.12	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1	[more]

BLAST of Lsi05G002460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T338	6.4e-95	88.52	Zinc finger protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3C410	6.4e-95	88.52	zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103496238 PE=4 SV=1	[more]
A0A0A0L948	1.9e-94	89.27	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G199020 P...	[more]
A0A6J1E569	1.8e-92	88.56	zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430693 PE=4 SV...	[more]
A0A6J1J9Y6	3.1e-89	86.63	zinc finger protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111482624 PE=4 SV=1	[more]

BLAST of Lsi05G002460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876126.1	4.0e-99	94.03	zinc finger protein 7-like [Benincasa hispida]	[more]
XP_008456235.1	1.3e-94	88.52	PREDICTED: zinc finger protein 7-like [Cucumis melo] >KAA0037198.1 zinc finger p...	[more]
XP_011651233.1	3.9e-94	89.27	zinc finger protein 7 [Cucumis sativus] >KGN57489.1 hypothetical protein Csa_010...	[more]
XP_022922826.1	3.6e-92	88.56	zinc finger protein 4-like [Cucurbita moschata]	[more]
XP_023551737.1	2.6e-90	87.56	zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >KAG7014956.1 Zinc finge...	[more]

BLAST of Lsi05G002460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66140.1	2.0e-16	35.71	zinc finger protein 4	[more]
AT1G24625.1	2.0e-16	42.86	zinc finger protein 7	[more]
AT1G80730.1	2.2e-15	42.45	zinc-finger protein 1	[more]
AT5G10970.1	3.8e-15	36.92	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	1.7e-10	36.92	zinc finger protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 8..37
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 50..112 e-value: 1.2E-7 score: 33.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR47593	ZINC FINGER PROTEIN 4-LIKE	coord: 3..201
None	No IPR available	PANTHER	PTHR47593:SF8	ZINC FINGER PROTEIN 4-LIKE	coord: 3..201
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 73..93
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 71..98 score: 11.19825
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 68..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G002460.1	Lsi05G002460.1	mRNA