Homology
BLAST of Lsi05G002260 vs. ExPASy Swiss-Prot
Match:
Q9FXA2 (Polyadenylate-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=PAB8 PE=1 SV=1)
HSP 1 Score: 922.5 bits (2383), Expect = 2.6e-267
Identity = 487/657 (74.12%), Postives = 553/657 (84.17%), Query Frame = 0
Query: 7 AQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTT 66
A+ A +G AA G A TTSLYVGDLD VTDSQL++ F Q GQVVSVRVCRD+TT
Sbjct: 23 AEAAAAAAGAAAAAAGAAQQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTT 82
Query: 67 RRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDK 126
RRSLGYGYVNY+ PQDA+RAL+ LNF LNG+ IRVMYS RDPS+RKSG GNIFIKNLDK
Sbjct: 83 RRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDK 142
Query: 127 AIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQ 186
+IDHKALH+TFSAFG ILSCKVA+D SGQSKGYGFVQ+D +E+AQ AI+KLNGMLLNDKQ
Sbjct: 143 SIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQ 202
Query: 187 VYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGK 246
VYVGPF+ K +RD +K KF NV+VKNLSE+ ++E+LNK F EFG TS V+MRD +GK
Sbjct: 203 VYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGK 262
Query: 247 SRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQTMKEAAD 306
S+ FGFVNFEN+DDAARAVDALNGK DDKEW+VGKAQKKSERE ELK +FEQ++KEAAD
Sbjct: 263 SKGFGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAAD 322
Query: 307 KYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASR 366
K QG+NLY+KNLD+S+ DDKL+E FAPFGTITSCKVMRDP+G+SRGSGFVAFSTPEEA+R
Sbjct: 323 KSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATR 382
Query: 367 ALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYPPGGPGI 426
A+ EMNGKM+V+KPLYVALAQRKEDR+ARLQAQFSQ+RPV M +V PRM +YPPGGP +
Sbjct: 383 AITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPM 442
Query: 427 GQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQG-------QQGQR 486
GQQLFYGQGPPAMIP Q GFGYQQQLVPG+RPGG PMPNFF+PM+QQG QQ QR
Sbjct: 443 GQQLFYGQGPPAMIP-QPGFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQQQQQQQR 502
Query: 487 PGGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDV-PMPGVAGGMFSVPYDM- 546
PGG R GA+ Q QQP PMMQQQM PR GR+YRYP DV MPG M SVPYD+
Sbjct: 503 PGGGRRGALPQPQQPSPMMQQQMHPR-GRMYRYPQ----RDVNTMPGPTQNMLSVPYDVS 562
Query: 547 --GGMPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGML 606
GG+ RD+ SQP+PI ALA+ LANA P+QQRTMLGENLYPLVEQLEP++AAKVTGML
Sbjct: 563 SGGGVHHRDSPTSQPVPIVALATRLANAAPEQQRTMLGENLYPLVEQLEPESAAKVTGML 622
Query: 607 LEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLTENLV 653
LEMDQTEVLHLLESPEALKAKV EAM+VLR+VA QQQAG AADQLASLSL +N+V
Sbjct: 623 LEMDQTEVLHLLESPEALKAKVTEAMDVLRSVA---QQQAGGAADQLASLSLGDNIV 670
BLAST of Lsi05G002260 vs. ExPASy Swiss-Prot
Match:
P42731 (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=1)
HSP 1 Score: 895.6 bits (2313), Expect = 3.4e-259
Identity = 468/656 (71.34%), Postives = 548/656 (83.54%), Query Frame = 0
Query: 3 AQVQAQ---PQNAISGIN--PAANGGA---NFVTTSLYVGDLDLNVTDSQLYDIFNQVGQ 62
AQVQ Q P + + + PA +GGA F TSLYVGDLD NVTDSQL+D F Q+G
Sbjct: 2 AQVQLQGQTPNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGT 61
Query: 63 VVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKS 122
VV+VRVCRDL TRRSLGYGYVN++NPQDAARA+ LN+ PL GKPIRVMYSHRDPS+R+S
Sbjct: 62 VVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRS 121
Query: 123 GAGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAI 182
GAGNIFIKNLD++IDHKALHDTFS+FG+I+SCKVA+DSSGQSKGYGFVQ+ NEESAQKAI
Sbjct: 122 GAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAI 181
Query: 183 EKLNGMLLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTL 242
EKLNGMLLNDKQVYVGPFLR+QERD +K+KF NV+VKNL+E+TT++DL AF E+G +
Sbjct: 182 EKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKI 241
Query: 243 TSIVVMRDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELK 302
TS VVM+D +GKS+ FGFVNFENADDAARAV++LNG DDKEWYVG+AQKKSERE EL+
Sbjct: 242 TSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELR 301
Query: 303 HRFEQTMKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSG 362
R+EQ +KEAADK+Q +NLY+KNLD SI D+KLKE+F+PFGT+TS KVMRDPNG S+GSG
Sbjct: 302 VRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSG 361
Query: 363 FVAFSTPEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAP 422
FVAF+TPEEA+ A+ +++GKM+ SKPLYVA+AQRKEDRR RLQAQFSQ+RPVAM SV P
Sbjct: 362 FVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGP 421
Query: 423 RMPIYPPGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQG 482
RMP+YPPGGPGIGQQ+FYGQ PPAMIP Q G+GYQQQLVPG+RPGGGP+P+FF+PMVQ
Sbjct: 422 RMPVYPPGGPGIGQQMFYGQAPPAMIPPQPGYGYQQQLVPGMRPGGGPVPSFFMPMVQ-- 481
Query: 483 QQGQRP-GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGR-GLPDVPMPGVAGGMFS 542
Q QRP GGRR G +Q +QQ PMMQQQM PR GR++RYP GR G DVP
Sbjct: 482 PQQQRPGGGRRPGGIQHSQQQNPMMQQQMHPR-GRMFRYPQGRGGSGDVP---------- 541
Query: 543 VPYDMGGMPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVT 602
PYDMG ++ P+ IGALAS L+NATP+QQRTMLGE LYPLVEQ+E ++AAKVT
Sbjct: 542 -PYDMG--------NNMPLTIGALASNLSNATPEQQRTMLGEVLYPLVEQVEAESAAKVT 601
Query: 603 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLT 649
GMLLEMDQTEVLHLLESPEALKAKVAEAM+VLR+VA AG A +QLASL+L+
Sbjct: 602 GMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRSVA------AGGATEQLASLNLS 629
BLAST of Lsi05G002260 vs. ExPASy Swiss-Prot
Match:
O22173 (Polyadenylate-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=PAB4 PE=1 SV=1)
HSP 1 Score: 795.8 bits (2054), Expect = 3.6e-229
Identity = 424/659 (64.34%), Postives = 504/659 (76.48%), Query Frame = 0
Query: 2 AAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVC 61
AA A P + G GA SLYVGDLD NVTDSQLYD F +V QVVSVRVC
Sbjct: 22 AATASATPGIGVGGGGDGVTHGA---LCSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVC 81
Query: 62 RDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFI 121
RD T SLGYGYVNYSN DA +A+ LN++ LNGK IR+ YS RD S R+SG GN+F+
Sbjct: 82 RDAATNTSLGYGYVNYSNTDDAEKAMQKLNYSYLNGKMIRITYSSRDSSARRSGVGNLFV 141
Query: 122 KNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGML 181
KNLDK++D+K LH+ FS G+I+SCKVA D GQS+GYGFVQFD E+SA+ AIEKLNG +
Sbjct: 142 KNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKV 201
Query: 182 LNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMR 241
LNDKQ++VGPFLRK+ER+ DK KF NV+VKNLSE TT+++L F ++G+++S VVMR
Sbjct: 202 LNDKQIFVGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMR 261
Query: 242 DADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQTM 301
D DGKSRCFGFVNFEN +DAARAV+ALNGK DDKEWYVGKAQKKSERE+EL R+EQ
Sbjct: 262 DGDGKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGS 321
Query: 302 KEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTP 361
+ +K+ G NLY+KNLDD++ D+KL+ELFA FGTITSCKVMRDP+G S+GSGFVAFS
Sbjct: 322 SDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAA 381
Query: 362 EEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYPP 421
EASR L EMNGKMV KPLYVALAQRKE+RRA+LQAQFSQ+RP A V PRMPI+
Sbjct: 382 SEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRP-AFIPGVGPRMPIFTG 441
Query: 422 GGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRPG 481
G PG+GQQ+FYGQGPP +IP Q GFGYQ QLVPG+RP F PM+Q GQQG RPG
Sbjct: 442 GAPGLGQQIFYGQGPPPIIPHQPGFGYQPQLVPGMRPA-----FFGGPMMQPGQQGPRPG 501
Query: 482 GRRAG---AVQQTQQPVPMMQQQMLPRGGRVYRYPP-GRGLPDVPMPGVAGGMFSVPYDM 541
GRR+G Q QQP+P MQ QM+PR GR YRYP GR +PD PMP GGM V YDM
Sbjct: 502 GRRSGDGPMRHQHQQPMPYMQPQMMPR-GRGYRYPSGGRNMPDGPMP---GGMVPVAYDM 561
Query: 542 GGMPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLE 601
MP +SQP+ G LA++LANATP QQRT+LGE+LYPLV+Q+E ++AAKVTGMLLE
Sbjct: 562 NVMP-----YSQPMSAGQLATSLANATPAQQRTLLGESLYPLVDQIESEHAAKVTGMLLE 621
Query: 602 MDQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQ-----QAGNAADQLASLSLTENL 652
MDQTEVLHLLESPEAL AKV+EA++VLRNV Q ++G+ +D LASLS+ ++L
Sbjct: 622 MDQTEVLHLLESPEALNAKVSEALDVLRNVNQPSSQGSEGNKSGSPSDLLASLSINDHL 662
BLAST of Lsi05G002260 vs. ExPASy Swiss-Prot
Match:
O64380 (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PAB3 PE=2 SV=1)
HSP 1 Score: 604.0 bits (1556), Expect = 2.0e-171
Identity = 346/632 (54.75%), Postives = 437/632 (69.15%), Query Frame = 0
Query: 3 AQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCR 62
AQ Q +I +P +SLY GDLD VT++ L+D+F V VVSVRVCR
Sbjct: 23 AQTSVQVPVSIPLPSPVVVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCR 82
Query: 63 DLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIK 122
D RRSLGY Y+N+SNP DA RA++ LN+TPL +PIR+M S+RDPS R SG GNIFIK
Sbjct: 83 D-QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIK 142
Query: 123 NLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLL 182
NLD +ID+KAL +TFS+FG+ILSCKVA+D +G+SKGYGFVQF+ EESAQ AI+KLNGML+
Sbjct: 143 NLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLM 202
Query: 183 NDKQVYVGPFLRKQE--RDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 242
NDKQV+VG F+R+QE RD +F NV+VKNL + E++L K F +FG ++S VVM
Sbjct: 203 NDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVM 262
Query: 243 RDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQT 302
RD G SRCFGFVNFE + AA AV+ +NG + D YVG+AQKKSERE EL+ +FEQ
Sbjct: 263 RDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQE 322
Query: 303 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 362
+K QGANLY+KNLDDS+ D+KLKE+F+ +G +TS KVM +P G+SRG GFVA+S
Sbjct: 323 RINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSN 382
Query: 363 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYP 422
PEEA RAL EMNGKM+ KPLY+ALAQRKEDRRA LQA FSQIR + +P
Sbjct: 383 PEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIRAPGPMSGFH-----HP 442
Query: 423 PGG--PGIGQQLFYGQGPPAMIPSQG-GFGYQQQLVPGIRPGGGPMPNFFV--PMVQQGQ 482
PGG PG Q ++ GQ +M+PSQ G+G+Q Q +PG+RPG GP NF V P+ +Q Q
Sbjct: 443 PGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGP-GNFIVPYPLQRQPQ 502
Query: 483 QGQRPGGRR-AGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMP-GVAGGMFSV 542
G R G RR A VQQ Q +M + P + GR D +P G+ + +
Sbjct: 503 TGPRMGFRRGATNVQQHIQQQQLMHRNPSPGMRYMNGASNGRNGMDSSVPQGILPPIIPL 562
Query: 543 PYDMGGMPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTG 602
P D + + A +PI L S+LA+A+P + MLGE LYPLVE+ EP + AKVTG
Sbjct: 563 PIDASSISHQKA---PLLPISKLTSSLASASPADRTRMLGEQLYPLVERHEPLHVAKVTG 622
Query: 603 MLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 626
MLLEMDQ E+LHL+ESPEALK+KV+EA++VLR
Sbjct: 623 MLLEMDQAEILHLMESPEALKSKVSEALDVLR 644
BLAST of Lsi05G002260 vs. ExPASy Swiss-Prot
Match:
Q05196 (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=PAB5 PE=1 SV=3)
HSP 1 Score: 590.9 bits (1522), Expect = 1.8e-167
Identity = 349/661 (52.80%), Postives = 453/661 (68.53%), Query Frame = 0
Query: 12 AISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLG 71
A++ AA +SLYVGDLD +V +S L D+FNQV V ++RVCRDL T RSLG
Sbjct: 42 AVAAAAAAAEALQTHPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLG 101
Query: 72 YGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDKAIDHK 131
Y YVN++NP+DA+RA++ LN+ P+ +PIR+M S+RDPS R SG GN+FIKNLD +ID+K
Sbjct: 102 YAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNK 161
Query: 132 ALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP 191
AL++TFS+FG+ILSCKVA+D G+SKGYGFVQF+ EE+AQ AI+KLNGMLLNDKQV+VG
Sbjct: 162 ALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGH 221
Query: 192 FLRKQER----DGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKS 251
F+R+Q+R G V F NV+VKNL + T+++L K F ++G ++S VVM+D G S
Sbjct: 222 FVRRQDRARSESGAV--PSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNS 281
Query: 252 RCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADK 311
R FGFVNF + + AA AV+ +NG + + YVG+AQKKS+RE EL+ +FEQ +K
Sbjct: 282 RSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEK 341
Query: 312 YQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRA 371
QG+NLY+KNLDDS+ D+KLKE+F+ +G +TSCKVM + G+SRG GFVA+S PEEA A
Sbjct: 342 LQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLA 401
Query: 372 LMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIR-PVAMAASVAPRMPI--YPPGGP 431
+ EMNGKM+ KPLYVALAQRKE+R+A LQ+ F+QIR P M+ +P +PPGGP
Sbjct: 402 MKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGP 461
Query: 432 --GIGQQLFYGQGPPAMIPSQG-GFGYQQQLVPGIRPGGGPMPNFFV--PMVQQGQQGQR 491
G +F G ++PSQ G+GYQ Q +PG+RPG GP PNF + P+ +Q Q G R
Sbjct: 462 MSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGP-PNFMMPFPLQRQTQPGPR 521
Query: 492 PGGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGM-FSVPYDMG 551
G RR GA QQ QQQML + R+ G G GM S P +
Sbjct: 522 VGFRR-GANNMQQQ---FQQQQMLQQNAS--RFMGGAG-------NRRNGMEASAPQGII 581
Query: 552 GMPLRDAAHSQ----------PIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNA 611
+PL +A+S P+ I LAS LA A+PD+ MLG++LYPLVEQ EP NA
Sbjct: 582 PLPLNASANSHNAPQRSHKPTPLTISKLASDLALASPDKHPRMLGDHLYPLVEQQEPANA 641
Query: 612 AKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLT 650
AKVTGMLLEMDQ E+LHLLESPEALKAKV+EA++VLR A A ++ D +LS +
Sbjct: 642 AKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVLRRSA---DPAAVSSVDDQFALSSS 682
BLAST of Lsi05G002260 vs. ExPASy TrEMBL
Match:
A0A5D3CRX0 (Polyadenylate-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001390 PE=3 SV=1)
HSP 1 Score: 1259.2 bits (3257), Expect = 0.0e+00
Identity = 647/654 (98.93%), Postives = 650/654 (99.39%), Query Frame = 0
Query: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
Query: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
Query: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQT 300
RDADGKSRCFGFVNFENADDAARAVDALNGKL+DDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
Query: 361 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYP 420
P+EASRAL+EMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAM ASVAPRMPIYP
Sbjct: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMPASVAPRMPIYP 420
Query: 421 PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
PGGPGIGQQLFYGQ PPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
Query: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGMFSVPYDMGGM 540
GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDV MPGVAGGMFSVPYDMGGM
Sbjct: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVAMPGVAGGMFSVPYDMGGM 540
Query: 541 PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ 600
PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ
Sbjct: 541 PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ 600
Query: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAA-QQQQAGNAADQLASLSLTENLVS 654
TEVLHLLESPEALKAKVAEAMEVLRNVAAA QQQQAGNAADQLASLSLTENLVS
Sbjct: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQQAGNAADQLASLSLTENLVS 654
BLAST of Lsi05G002260 vs. ExPASy TrEMBL
Match:
A0A1S3C385 (Polyadenylate-binding protein OS=Cucumis melo OX=3656 GN=LOC103496171 PE=3 SV=1)
HSP 1 Score: 1259.2 bits (3257), Expect = 0.0e+00
Identity = 647/654 (98.93%), Postives = 650/654 (99.39%), Query Frame = 0
Query: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
Query: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
Query: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQT 300
RDADGKSRCFGFVNFENADDAARAVDALNGKL+DDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
Query: 361 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYP 420
P+EASRAL+EMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAM ASVAPRMPIYP
Sbjct: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMPASVAPRMPIYP 420
Query: 421 PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
PGGPGIGQQLFYGQ PPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
Query: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGMFSVPYDMGGM 540
GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDV MPGVAGGMFSVPYDMGGM
Sbjct: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVAMPGVAGGMFSVPYDMGGM 540
Query: 541 PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ 600
PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ
Sbjct: 541 PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ 600
Query: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAA-QQQQAGNAADQLASLSLTENLVS 654
TEVLHLLESPEALKAKVAEAMEVLRNVAAA QQQQAGNAADQLASLSLTENLVS
Sbjct: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQQAGNAADQLASLSLTENLVS 654
BLAST of Lsi05G002260 vs. ExPASy TrEMBL
Match:
A0A5A7T6F2 (Polyadenylate-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G00430 PE=3 SV=1)
HSP 1 Score: 1254.6 bits (3245), Expect = 0.0e+00
Identity = 647/655 (98.78%), Postives = 650/655 (99.24%), Query Frame = 0
Query: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
Query: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
Query: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQT 300
RDADGKSRCFGFVNFENADDAARAVDALNGKL+DDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCK-VMRDPNGISRGSGFVAFS 360
MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCK VMRDPNGISRGSGFVAFS
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVVMRDPNGISRGSGFVAFS 360
Query: 361 TPEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIY 420
TP+EASRAL+EMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAM ASVAPRMPIY
Sbjct: 361 TPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMPASVAPRMPIY 420
Query: 421 PPGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQR 480
PPGGPGIGQQLFYGQ PPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQR
Sbjct: 421 PPGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQR 480
Query: 481 PGGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGMFSVPYDMGG 540
PGGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDV MPGVAGGMFSVPYDMGG
Sbjct: 481 PGGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVAMPGVAGGMFSVPYDMGG 540
Query: 541 MPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMD 600
MPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMD
Sbjct: 541 MPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMD 600
Query: 601 QTEVLHLLESPEALKAKVAEAMEVLRNVAAA-QQQQAGNAADQLASLSLTENLVS 654
QTEVLHLLESPEALKAKVAEAMEVLRNVAAA QQQQAGNAADQLASLSLTENLVS
Sbjct: 601 QTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQQAGNAADQLASLSLTENLVS 655
BLAST of Lsi05G002260 vs. ExPASy TrEMBL
Match:
A0A0A0L989 (Polyadenylate-binding protein OS=Cucumis sativus OX=3659 GN=Csa_3G202720 PE=3 SV=1)
HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 642/654 (98.17%), Postives = 645/654 (98.62%), Query Frame = 0
Query: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
MA QVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1 MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
Query: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESA KAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180
Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
Query: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQT 300
RDADGKSRCFGFVNFENADDAARAVD LNGKL+DDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
Query: 361 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYP 420
P+EASRAL+EMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIR V M ASVAPRMPIYP
Sbjct: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP 420
Query: 421 PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
PGGPGIGQQLFYGQ PPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
Query: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGMFSVPYDMGGM 540
GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDV MPGVAGGMFSVPYDMGGM
Sbjct: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVAMPGVAGGMFSVPYDMGGM 540
Query: 541 PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ 600
PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ
Sbjct: 541 PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ 600
Query: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAA-QQQQAGNAADQLASLSLTENLVS 654
TEVLHLLESPEALKAKVAEAMEVLRNVAAA QQQQAGNAADQLASLSLTENLVS
Sbjct: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQQAGNAADQLASLSLTENLVS 654
BLAST of Lsi05G002260 vs. ExPASy TrEMBL
Match:
A0A6J1E7L0 (Polyadenylate-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111430615 PE=3 SV=1)
HSP 1 Score: 1233.4 bits (3190), Expect = 0.0e+00
Identity = 632/655 (96.49%), Postives = 644/655 (98.32%), Query Frame = 0
Query: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
MAAQVQ+Q QNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1 MAAQVQSQSQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
Query: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEES QKAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESGQKAIEKLNGM 180
Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKN SETT+EE+LN FSEFGT+TSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNFSETTSEEELNDVFSEFGTITSIVVM 240
Query: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQT 300
RDADGKS+CFGFVNFE+ DDAARAVDALNGKL+DDKEWYVGKAQKKSEREVELK+RFEQT
Sbjct: 241 RDADGKSKCFGFVNFESVDDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKNRFEQT 300
Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
MKEAADKYQGANLYIKNLDDSI DDKLKELFA FGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIVDDKLKELFASFGTITSCKVMRDPNGISRGSGFVAFST 360
Query: 361 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYP 420
PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPV+MAASVAPRMP+YP
Sbjct: 361 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVSMAASVAPRMPMYP 420
Query: 421 PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
Query: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGMFSVPYDMGG- 540
GGRRAGAVQQ QQPVPMMQQQMLPRGGRVYRYPPGRG+PDVPMPGVAGGMFSVPY+MGG
Sbjct: 481 GGRRAGAVQQNQQPVPMMQQQMLPRGGRVYRYPPGRGMPDVPMPGVAGGMFSVPYEMGGM 540
Query: 541 -MPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEM 600
MPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEM
Sbjct: 541 PMPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEM 600
Query: 601 DQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLTENLVS 654
DQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLTENLVS
Sbjct: 601 DQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLTENLVS 655
BLAST of Lsi05G002260 vs. NCBI nr
Match:
XP_038892025.1 (polyadenylate-binding protein 2-like [Benincasa hispida])
HSP 1 Score: 1262.7 bits (3266), Expect = 0.0e+00
Identity = 645/653 (98.77%), Postives = 651/653 (99.69%), Query Frame = 0
Query: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
MAAQVQAQPQNAISG+NPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1 MAAQVQAQPQNAISGVNPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
Query: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
Query: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQT 300
RDADGKSRCFGFVNFENADDAARAVDALNGKL+DDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
Query: 361 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYP 420
PEEASRAL+EMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPV MAASVAPRMPIYP
Sbjct: 361 PEEASRALIEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVPMAASVAPRMPIYP 420
Query: 421 PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
PGGPGIGQQ+F+GQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQVFFGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
Query: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGMFSVPYDMGGM 540
GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGMFSVPYDMGGM
Sbjct: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGMFSVPYDMGGM 540
Query: 541 PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ 600
LRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEP+NAAKVTGMLLEMDQ
Sbjct: 541 ALRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPENAAKVTGMLLEMDQ 600
Query: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLTENLVS 654
TEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLTENLVS
Sbjct: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLTENLVS 653
BLAST of Lsi05G002260 vs. NCBI nr
Match:
XP_008456142.1 (PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Cucumis melo] >TYK13938.1 polyadenylate-binding protein 2-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 1259.2 bits (3257), Expect = 0.0e+00
Identity = 647/654 (98.93%), Postives = 650/654 (99.39%), Query Frame = 0
Query: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
Query: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
Query: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQT 300
RDADGKSRCFGFVNFENADDAARAVDALNGKL+DDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
Query: 361 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYP 420
P+EASRAL+EMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAM ASVAPRMPIYP
Sbjct: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMPASVAPRMPIYP 420
Query: 421 PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
PGGPGIGQQLFYGQ PPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
Query: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGMFSVPYDMGGM 540
GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDV MPGVAGGMFSVPYDMGGM
Sbjct: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVAMPGVAGGMFSVPYDMGGM 540
Query: 541 PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ 600
PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ
Sbjct: 541 PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ 600
Query: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAA-QQQQAGNAADQLASLSLTENLVS 654
TEVLHLLESPEALKAKVAEAMEVLRNVAAA QQQQAGNAADQLASLSLTENLVS
Sbjct: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQQAGNAADQLASLSLTENLVS 654
BLAST of Lsi05G002260 vs. NCBI nr
Match:
KAA0037137.1 (polyadenylate-binding protein 2-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 1254.6 bits (3245), Expect = 0.0e+00
Identity = 647/655 (98.78%), Postives = 650/655 (99.24%), Query Frame = 0
Query: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
Query: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
Query: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQT 300
RDADGKSRCFGFVNFENADDAARAVDALNGKL+DDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCK-VMRDPNGISRGSGFVAFS 360
MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCK VMRDPNGISRGSGFVAFS
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVVMRDPNGISRGSGFVAFS 360
Query: 361 TPEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIY 420
TP+EASRAL+EMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAM ASVAPRMPIY
Sbjct: 361 TPDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMPASVAPRMPIY 420
Query: 421 PPGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQR 480
PPGGPGIGQQLFYGQ PPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQR
Sbjct: 421 PPGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQR 480
Query: 481 PGGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGMFSVPYDMGG 540
PGGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDV MPGVAGGMFSVPYDMGG
Sbjct: 481 PGGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVAMPGVAGGMFSVPYDMGG 540
Query: 541 MPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMD 600
MPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMD
Sbjct: 541 MPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMD 600
Query: 601 QTEVLHLLESPEALKAKVAEAMEVLRNVAAA-QQQQAGNAADQLASLSLTENLVS 654
QTEVLHLLESPEALKAKVAEAMEVLRNVAAA QQQQAGNAADQLASLSLTENLVS
Sbjct: 601 QTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQQAGNAADQLASLSLTENLVS 655
BLAST of Lsi05G002260 vs. NCBI nr
Match:
XP_004140705.1 (polyadenylate-binding protein 8 [Cucumis sativus] >KGN57514.1 hypothetical protein Csa_010531 [Cucumis sativus])
HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 642/654 (98.17%), Postives = 645/654 (98.62%), Query Frame = 0
Query: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
MA QVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1 MATQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
Query: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESA KAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGM 180
Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
Query: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQT 300
RDADGKSRCFGFVNFENADDAARAVD LNGKL+DDKEWYVGKAQKKSEREVELKHRFEQT
Sbjct: 241 RDADGKSRCFGFVNFENADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQT 300
Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
Query: 361 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYP 420
P+EASRAL+EMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIR V M ASVAPRMPIYP
Sbjct: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYP 420
Query: 421 PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
PGGPGIGQQLFYGQ PPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
Query: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGMFSVPYDMGGM 540
GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDV MPGVAGGMFSVPYDMGGM
Sbjct: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVAMPGVAGGMFSVPYDMGGM 540
Query: 541 PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ 600
PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ
Sbjct: 541 PLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ 600
Query: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAA-QQQQAGNAADQLASLSLTENLVS 654
TEVLHLLESPEALKAKVAEAMEVLRNVAAA QQQQAGNAADQLASLSLTENLVS
Sbjct: 601 TEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQQAGNAADQLASLSLTENLVS 654
BLAST of Lsi05G002260 vs. NCBI nr
Match:
KAG6576947.1 (Polyadenylate-binding protein 8, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 634/655 (96.79%), Postives = 646/655 (98.63%), Query Frame = 0
Query: 1 MAAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
MAAQVQ+QPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV
Sbjct: 1 MAAQVQSQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRV 60
Query: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF
Sbjct: 61 CRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIF 120
Query: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGM 180
IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEES QKAIEKLNGM
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESGQKAIEKLNGM 180
Query: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 240
LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKN SETT+EE+LN FSEFGT+TSIVVM
Sbjct: 181 LLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNFSETTSEEELNDVFSEFGTITSIVVM 240
Query: 241 RDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQT 300
RDADGKS+CFGFVNFE+ADDAARAVDALNGKL+DDKEWYVGKAQKKSEREVELK+RFEQT
Sbjct: 241 RDADGKSKCFGFVNFESADDAARAVDALNGKLVDDKEWYVGKAQKKSEREVELKNRFEQT 300
Query: 301 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 360
MKEAADKYQGANLYIKNLDDSI DDKLKELFA FGTITSCKVMRDPNGISRGSGFVAFST
Sbjct: 301 MKEAADKYQGANLYIKNLDDSIVDDKLKELFASFGTITSCKVMRDPNGISRGSGFVAFST 360
Query: 361 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYP 420
PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPV+MAASVAPRMP+YP
Sbjct: 361 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVSMAASVAPRMPMYP 420
Query: 421 PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP
Sbjct: 421 PGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRP 480
Query: 481 GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMPGVAGGMFSVPYDMGG- 540
GGRRAGAVQQ QQPVPMMQQQMLPRGGRVYRYPPGRG+PDVPMPGVAGGMFSVPY+MGG
Sbjct: 481 GGRRAGAVQQNQQPVPMMQQQMLPRGGRVYRYPPGRGMPDVPMPGVAGGMFSVPYEMGGM 540
Query: 541 -MPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEM 600
MPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEM
Sbjct: 541 PMPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEM 600
Query: 601 DQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLTENLVS 654
DQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLTENLVS
Sbjct: 601 DQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLTENLVS 655
BLAST of Lsi05G002260 vs. TAIR 10
Match:
AT1G49760.1 (poly(A) binding protein 8 )
HSP 1 Score: 922.5 bits (2383), Expect = 1.8e-268
Identity = 487/657 (74.12%), Postives = 553/657 (84.17%), Query Frame = 0
Query: 7 AQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTT 66
A+ A +G AA G A TTSLYVGDLD VTDSQL++ F Q GQVVSVRVCRD+TT
Sbjct: 23 AEAAAAAAGAAAAAAGAAQQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTT 82
Query: 67 RRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDK 126
RRSLGYGYVNY+ PQDA+RAL+ LNF LNG+ IRVMYS RDPS+RKSG GNIFIKNLDK
Sbjct: 83 RRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDK 142
Query: 127 AIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQ 186
+IDHKALH+TFSAFG ILSCKVA+D SGQSKGYGFVQ+D +E+AQ AI+KLNGMLLNDKQ
Sbjct: 143 SIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQ 202
Query: 187 VYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGK 246
VYVGPF+ K +RD +K KF NV+VKNLSE+ ++E+LNK F EFG TS V+MRD +GK
Sbjct: 203 VYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGK 262
Query: 247 SRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQTMKEAAD 306
S+ FGFVNFEN+DDAARAVDALNGK DDKEW+VGKAQKKSERE ELK +FEQ++KEAAD
Sbjct: 263 SKGFGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAAD 322
Query: 307 KYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASR 366
K QG+NLY+KNLD+S+ DDKL+E FAPFGTITSCKVMRDP+G+SRGSGFVAFSTPEEA+R
Sbjct: 323 KSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATR 382
Query: 367 ALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYPPGGPGI 426
A+ EMNGKM+V+KPLYVALAQRKEDR+ARLQAQFSQ+RPV M +V PRM +YPPGGP +
Sbjct: 383 AITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPM 442
Query: 427 GQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQG-------QQGQR 486
GQQLFYGQGPPAMIP Q GFGYQQQLVPG+RPGG PMPNFF+PM+QQG QQ QR
Sbjct: 443 GQQLFYGQGPPAMIP-QPGFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQQQQQQQR 502
Query: 487 PGGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDV-PMPGVAGGMFSVPYDM- 546
PGG R GA+ Q QQP PMMQQQM PR GR+YRYP DV MPG M SVPYD+
Sbjct: 503 PGGGRRGALPQPQQPSPMMQQQMHPR-GRMYRYPQ----RDVNTMPGPTQNMLSVPYDVS 562
Query: 547 --GGMPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGML 606
GG+ RD+ SQP+PI ALA+ LANA P+QQRTMLGENLYPLVEQLEP++AAKVTGML
Sbjct: 563 SGGGVHHRDSPTSQPVPIVALATRLANAAPEQQRTMLGENLYPLVEQLEPESAAKVTGML 622
Query: 607 LEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLTENLV 653
LEMDQTEVLHLLESPEALKAKV EAM+VLR+VA QQQAG AADQLASLSL +N+V
Sbjct: 623 LEMDQTEVLHLLESPEALKAKVTEAMDVLRSVA---QQQAGGAADQLASLSLGDNIV 670
BLAST of Lsi05G002260 vs. TAIR 10
Match:
AT1G49760.2 (poly(A) binding protein 8 )
HSP 1 Score: 922.5 bits (2383), Expect = 1.8e-268
Identity = 487/657 (74.12%), Postives = 553/657 (84.17%), Query Frame = 0
Query: 7 AQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTT 66
A+ A +G AA G A TTSLYVGDLD VTDSQL++ F Q GQVVSVRVCRD+TT
Sbjct: 23 AEAAAAAAGAAAAAAGAAQQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTT 82
Query: 67 RRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDK 126
RRSLGYGYVNY+ PQDA+RAL+ LNF LNG+ IRVMYS RDPS+RKSG GNIFIKNLDK
Sbjct: 83 RRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDK 142
Query: 127 AIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQ 186
+IDHKALH+TFSAFG ILSCKVA+D SGQSKGYGFVQ+D +E+AQ AI+KLNGMLLNDKQ
Sbjct: 143 SIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQ 202
Query: 187 VYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGK 246
VYVGPF+ K +RD +K KF NV+VKNLSE+ ++E+LNK F EFG TS V+MRD +GK
Sbjct: 203 VYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGK 262
Query: 247 SRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQTMKEAAD 306
S+ FGFVNFEN+DDAARAVDALNGK DDKEW+VGKAQKKSERE ELK +FEQ++KEAAD
Sbjct: 263 SKGFGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAAD 322
Query: 307 KYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASR 366
K QG+NLY+KNLD+S+ DDKL+E FAPFGTITSCKVMRDP+G+SRGSGFVAFSTPEEA+R
Sbjct: 323 KSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATR 382
Query: 367 ALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYPPGGPGI 426
A+ EMNGKM+V+KPLYVALAQRKEDR+ARLQAQFSQ+RPV M +V PRM +YPPGGP +
Sbjct: 383 AITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPM 442
Query: 427 GQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQG-------QQGQR 486
GQQLFYGQGPPAMIP Q GFGYQQQLVPG+RPGG PMPNFF+PM+QQG QQ QR
Sbjct: 443 GQQLFYGQGPPAMIP-QPGFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQQQQQQQR 502
Query: 487 PGGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDV-PMPGVAGGMFSVPYDM- 546
PGG R GA+ Q QQP PMMQQQM PR GR+YRYP DV MPG M SVPYD+
Sbjct: 503 PGGGRRGALPQPQQPSPMMQQQMHPR-GRMYRYPQ----RDVNTMPGPTQNMLSVPYDVS 562
Query: 547 --GGMPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGML 606
GG+ RD+ SQP+PI ALA+ LANA P+QQRTMLGENLYPLVEQLEP++AAKVTGML
Sbjct: 563 SGGGVHHRDSPTSQPVPIVALATRLANAAPEQQRTMLGENLYPLVEQLEPESAAKVTGML 622
Query: 607 LEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLTENLV 653
LEMDQTEVLHLLESPEALKAKV EAM+VLR+VA QQQAG AADQLASLSL +N+V
Sbjct: 623 LEMDQTEVLHLLESPEALKAKVTEAMDVLRSVA---QQQAGGAADQLASLSLGDNIV 670
BLAST of Lsi05G002260 vs. TAIR 10
Match:
AT4G34110.1 (poly(A) binding protein 2 )
HSP 1 Score: 895.6 bits (2313), Expect = 2.4e-260
Identity = 468/656 (71.34%), Postives = 548/656 (83.54%), Query Frame = 0
Query: 3 AQVQAQ---PQNAISGIN--PAANGGA---NFVTTSLYVGDLDLNVTDSQLYDIFNQVGQ 62
AQVQ Q P + + + PA +GGA F TSLYVGDLD NVTDSQL+D F Q+G
Sbjct: 2 AQVQLQGQTPNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGT 61
Query: 63 VVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKS 122
VV+VRVCRDL TRRSLGYGYVN++NPQDAARA+ LN+ PL GKPIRVMYSHRDPS+R+S
Sbjct: 62 VVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRS 121
Query: 123 GAGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAI 182
GAGNIFIKNLD++IDHKALHDTFS+FG+I+SCKVA+DSSGQSKGYGFVQ+ NEESAQKAI
Sbjct: 122 GAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAI 181
Query: 183 EKLNGMLLNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTL 242
EKLNGMLLNDKQVYVGPFLR+QERD +K+KF NV+VKNL+E+TT++DL AF E+G +
Sbjct: 182 EKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKI 241
Query: 243 TSIVVMRDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELK 302
TS VVM+D +GKS+ FGFVNFENADDAARAV++LNG DDKEWYVG+AQKKSERE EL+
Sbjct: 242 TSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELR 301
Query: 303 HRFEQTMKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSG 362
R+EQ +KEAADK+Q +NLY+KNLD SI D+KLKE+F+PFGT+TS KVMRDPNG S+GSG
Sbjct: 302 VRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSG 361
Query: 363 FVAFSTPEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAP 422
FVAF+TPEEA+ A+ +++GKM+ SKPLYVA+AQRKEDRR RLQAQFSQ+RPVAM SV P
Sbjct: 362 FVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGP 421
Query: 423 RMPIYPPGGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQG 482
RMP+YPPGGPGIGQQ+FYGQ PPAMIP Q G+GYQQQLVPG+RPGGGP+P+FF+PMVQ
Sbjct: 422 RMPVYPPGGPGIGQQMFYGQAPPAMIPPQPGYGYQQQLVPGMRPGGGPVPSFFMPMVQ-- 481
Query: 483 QQGQRP-GGRRAGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGR-GLPDVPMPGVAGGMFS 542
Q QRP GGRR G +Q +QQ PMMQQQM PR GR++RYP GR G DVP
Sbjct: 482 PQQQRPGGGRRPGGIQHSQQQNPMMQQQMHPR-GRMFRYPQGRGGSGDVP---------- 541
Query: 543 VPYDMGGMPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVT 602
PYDMG ++ P+ IGALAS L+NATP+QQRTMLGE LYPLVEQ+E ++AAKVT
Sbjct: 542 -PYDMG--------NNMPLTIGALASNLSNATPEQQRTMLGEVLYPLVEQVEAESAAKVT 601
Query: 603 GMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQQAGNAADQLASLSLT 649
GMLLEMDQTEVLHLLESPEALKAKVAEAM+VLR+VA AG A +QLASL+L+
Sbjct: 602 GMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRSVA------AGGATEQLASLNLS 629
BLAST of Lsi05G002260 vs. TAIR 10
Match:
AT2G23350.1 (poly(A) binding protein 4 )
HSP 1 Score: 795.8 bits (2054), Expect = 2.6e-230
Identity = 424/659 (64.34%), Postives = 504/659 (76.48%), Query Frame = 0
Query: 2 AAQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVC 61
AA A P + G GA SLYVGDLD NVTDSQLYD F +V QVVSVRVC
Sbjct: 22 AATASATPGIGVGGGGDGVTHGA---LCSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVC 81
Query: 62 RDLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFI 121
RD T SLGYGYVNYSN DA +A+ LN++ LNGK IR+ YS RD S R+SG GN+F+
Sbjct: 82 RDAATNTSLGYGYVNYSNTDDAEKAMQKLNYSYLNGKMIRITYSSRDSSARRSGVGNLFV 141
Query: 122 KNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGML 181
KNLDK++D+K LH+ FS G+I+SCKVA D GQS+GYGFVQFD E+SA+ AIEKLNG +
Sbjct: 142 KNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKV 201
Query: 182 LNDKQVYVGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMR 241
LNDKQ++VGPFLRK+ER+ DK KF NV+VKNLSE TT+++L F ++G+++S VVMR
Sbjct: 202 LNDKQIFVGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMR 261
Query: 242 DADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQTM 301
D DGKSRCFGFVNFEN +DAARAV+ALNGK DDKEWYVGKAQKKSERE+EL R+EQ
Sbjct: 262 DGDGKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGS 321
Query: 302 KEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTP 361
+ +K+ G NLY+KNLDD++ D+KL+ELFA FGTITSCKVMRDP+G S+GSGFVAFS
Sbjct: 322 SDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAA 381
Query: 362 EEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYPP 421
EASR L EMNGKMV KPLYVALAQRKE+RRA+LQAQFSQ+RP A V PRMPI+
Sbjct: 382 SEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRP-AFIPGVGPRMPIFTG 441
Query: 422 GGPGIGQQLFYGQGPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRPG 481
G PG+GQQ+FYGQGPP +IP Q GFGYQ QLVPG+RP F PM+Q GQQG RPG
Sbjct: 442 GAPGLGQQIFYGQGPPPIIPHQPGFGYQPQLVPGMRPA-----FFGGPMMQPGQQGPRPG 501
Query: 482 GRRAG---AVQQTQQPVPMMQQQMLPRGGRVYRYPP-GRGLPDVPMPGVAGGMFSVPYDM 541
GRR+G Q QQP+P MQ QM+PR GR YRYP GR +PD PMP GGM V YDM
Sbjct: 502 GRRSGDGPMRHQHQQPMPYMQPQMMPR-GRGYRYPSGGRNMPDGPMP---GGMVPVAYDM 561
Query: 542 GGMPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLE 601
MP +SQP+ G LA++LANATP QQRT+LGE+LYPLV+Q+E ++AAKVTGMLLE
Sbjct: 562 NVMP-----YSQPMSAGQLATSLANATPAQQRTLLGESLYPLVDQIESEHAAKVTGMLLE 621
Query: 602 MDQTEVLHLLESPEALKAKVAEAMEVLRNVAAAQQQ-----QAGNAADQLASLSLTENL 652
MDQTEVLHLLESPEAL AKV+EA++VLRNV Q ++G+ +D LASLS+ ++L
Sbjct: 622 MDQTEVLHLLESPEALNAKVSEALDVLRNVNQPSSQGSEGNKSGSPSDLLASLSINDHL 662
BLAST of Lsi05G002260 vs. TAIR 10
Match:
AT1G22760.1 (poly(A) binding protein 3 )
HSP 1 Score: 604.0 bits (1556), Expect = 1.4e-172
Identity = 346/632 (54.75%), Postives = 437/632 (69.15%), Query Frame = 0
Query: 3 AQVQAQPQNAISGINPAANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCR 62
AQ Q +I +P +SLY GDLD VT++ L+D+F V VVSVRVCR
Sbjct: 23 AQTSVQVPVSIPLPSPVVVADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCR 82
Query: 63 DLTTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIK 122
D RRSLGY Y+N+SNP DA RA++ LN+TPL +PIR+M S+RDPS R SG GNIFIK
Sbjct: 83 D-QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIK 142
Query: 123 NLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLL 182
NLD +ID+KAL +TFS+FG+ILSCKVA+D +G+SKGYGFVQF+ EESAQ AI+KLNGML+
Sbjct: 143 NLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLM 202
Query: 183 NDKQVYVGPFLRKQE--RDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVM 242
NDKQV+VG F+R+QE RD +F NV+VKNL + E++L K F +FG ++S VVM
Sbjct: 203 NDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVM 262
Query: 243 RDADGKSRCFGFVNFENADDAARAVDALNGKLIDDKEWYVGKAQKKSEREVELKHRFEQT 302
RD G SRCFGFVNFE + AA AV+ +NG + D YVG+AQKKSERE EL+ +FEQ
Sbjct: 263 RDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQE 322
Query: 303 MKEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFST 362
+K QGANLY+KNLDDS+ D+KLKE+F+ +G +TS KVM +P G+SRG GFVA+S
Sbjct: 323 RINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSN 382
Query: 363 PEEASRALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAASVAPRMPIYP 422
PEEA RAL EMNGKM+ KPLY+ALAQRKEDRRA LQA FSQIR + +P
Sbjct: 383 PEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIRAPGPMSGFH-----HP 442
Query: 423 PGG--PGIGQQLFYGQGPPAMIPSQG-GFGYQQQLVPGIRPGGGPMPNFFV--PMVQQGQ 482
PGG PG Q ++ GQ +M+PSQ G+G+Q Q +PG+RPG GP NF V P+ +Q Q
Sbjct: 443 PGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGP-GNFIVPYPLQRQPQ 502
Query: 483 QGQRPGGRR-AGAVQQTQQPVPMMQQQMLPRGGRVYRYPPGRGLPDVPMP-GVAGGMFSV 542
G R G RR A VQQ Q +M + P + GR D +P G+ + +
Sbjct: 503 TGPRMGFRRGATNVQQHIQQQQLMHRNPSPGMRYMNGASNGRNGMDSSVPQGILPPIIPL 562
Query: 543 PYDMGGMPLRDAAHSQPIPIGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTG 602
P D + + A +PI L S+LA+A+P + MLGE LYPLVE+ EP + AKVTG
Sbjct: 563 PIDASSISHQKA---PLLPISKLTSSLASASPADRTRMLGEQLYPLVERHEPLHVAKVTG 622
Query: 603 MLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 626
MLLEMDQ E+LHL+ESPEALK+KV+EA++VLR
Sbjct: 623 MLLEMDQAEILHLMESPEALKSKVSEALDVLR 644
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FXA2 | 2.6e-267 | 74.12 | Polyadenylate-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=PAB8 PE=1 SV=... | [more] |
P42731 | 3.4e-259 | 71.34 | Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=... | [more] |
O22173 | 3.6e-229 | 64.34 | Polyadenylate-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=PAB4 PE=1 SV=... | [more] |
O64380 | 2.0e-171 | 54.75 | Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PAB3 PE=2 SV=... | [more] |
Q05196 | 1.8e-167 | 52.80 | Polyadenylate-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=PAB5 PE=1 SV=... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CRX0 | 0.0e+00 | 98.93 | Polyadenylate-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A1S3C385 | 0.0e+00 | 98.93 | Polyadenylate-binding protein OS=Cucumis melo OX=3656 GN=LOC103496171 PE=3 SV=1 | [more] |
A0A5A7T6F2 | 0.0e+00 | 98.78 | Polyadenylate-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A0A0L989 | 0.0e+00 | 98.17 | Polyadenylate-binding protein OS=Cucumis sativus OX=3659 GN=Csa_3G202720 PE=3 SV... | [more] |
A0A6J1E7L0 | 0.0e+00 | 96.49 | Polyadenylate-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111430615 PE=3... | [more] |
Match Name | E-value | Identity | Description | |
XP_038892025.1 | 0.0e+00 | 98.77 | polyadenylate-binding protein 2-like [Benincasa hispida] | [more] |
XP_008456142.1 | 0.0e+00 | 98.93 | PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Cucumis melo] >TYK13... | [more] |
KAA0037137.1 | 0.0e+00 | 98.78 | polyadenylate-binding protein 2-like isoform X1 [Cucumis melo var. makuwa] | [more] |
XP_004140705.1 | 0.0e+00 | 98.17 | polyadenylate-binding protein 8 [Cucumis sativus] >KGN57514.1 hypothetical prote... | [more] |
KAG6576947.1 | 0.0e+00 | 96.79 | Polyadenylate-binding protein 8, partial [Cucurbita argyrosperma subsp. sororia] | [more] |