Lsi05G002230 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATCGTTTTAACTTTAACAACCACCCTGGTGAAGGCACGCAACCGTTCGATCTCAACCATGGCGACCAATGAGCAACAAGACCAGGCAGGAAGGCATCAAGAAGTCGGGCATAAGAGCTTGTTGCAAAGCGATGCTCTTAACCAGGTGAATCAATTATTTGTCCTTTTTTCGTTTCTTAGTACAACTAGCGGAGGTGTAGAGATTTTAATCTTCAAACTCATAGAAAAAGTATATGTTAATTACTGTTGAACTATATTTACTTAGGTATGTGAATCAATTAATTAAGCATTTTCTTTCTTTTATTTTAAAAATAAAAGAAAGAAAATGCTTAATTAATTGATTCACATACATGTTAATTTTCCATTAATCATATATTCCTCCATCTAGTCCATTATTTTTCATTATAACATAATATTAGGTAATTAAATAACTAAAGCTTCGTTTGATGAACATTTGATTTTTTTTTTCTTTTTAAAATTTTTTTAAAATATGTTTACAAGCACTACTCCCGCGCTCTAAGTTTTTGTTTTCTTTTGTTATTCATTTTATATTAAAAAAAACTATGTGAATTTTTGAAACCTAAAAATAGTAGATTTAAAATCAATAATTCTTTTTTCTTTCCATTTCTCTATTATGATTTTCTCCTGTATGAAGGAGATACTTGAATTCCTTGTCAAATTCTAAAAATAAAAACTACTTTTTTTCCTTAAAATTTGGCTTTGTTTTGTAAAATATGAGAGAAAATAGATAAAAAAAAATACATAAAATTTTAGTAAAATCATTATAAACAAAAAAAAAATATCAAACTATTAACAGATATAGAACAATTTCACTATCTATCAACGATAGACTGCAATAGAACTCTATTACTTGAGCGATAGAAAGGGATAGAATTCTATCGTGGTCTATTGCTATAGACAGTAAATTTTTTTTATATTTGTAAATAGTTTTGCTCATTTTTCTATATTTGAAAATAGCCAAAAAATTTATGAGAAAAATAATGCTTATAAGCCTAATATAGTTATCAAACAGAATCATAGTTTTTCAAAACTTGTTTTTTATTTTAAAATTTGACTGGGAGTCCGAATAATTTTTTTTAAAAAAAGGTGAAAACAATTATTAAAAAAAATGTAAGAAAGCAAACAAAAAAAATATAAAATATAAAACTAAAAATAAAATCATTAACAAGCAAGCTTAAGTAAAATGATTTTATGAAAATATTAACAAATTCTCTTTTTTTGTGCTTGTGTATAGTATATTTTAGAGACAAGTGTGTATCCAAGAGAGCCAGAAGCTATGAAGGAACTTAGAGACTTGACAGCCAAACATCCTTGGTGACCTCATTTTAAACTAAACCATTTGGTTCCTTTTTTTATCTAGTTTATTTTTATACAATATTTAAATTAACATACATTTATATTATATATTAATACTATAAATATATAAATAAATAGGAATATAATGACAACATCAGCAGATGAAGGGCAGTTCTTGAACATGCTGTTGAAGCTGATCAATGCCAAGAACACCATGGAGATTGGTGTCTATACTGGCTACTCCCTCCTCGCCACCGCCCTCGCTCTTCCTGACGATGGAAAGGTCGTTCGTCAAAACATGTTTCGATAACTATTTACAATATGTTCGGTAGCTATTTCGGTTTCTTTGTATTCGTTTCTAATGATAAATTTATTTCATCTATTTTTATTTATAATAATTTCAAATGTAAAATAATCTTAGAGATTTTTTTTTTTCTTTTTTTTAAAAAAAAGGTTAAATTGGCTTTATAATTACACAGATACTAGCAATGGATATTAACAGAGAAAACTATGAACTTGGGCTTCCGGTGATCCAGAAAGCTGGTGTGGCCCATAAGATTGAATTCAAAGAAGGCCCAGCTCTCCCTATACTCGATCAACTCCTCGCTGACGTAAGTTTTTTTCTTTTTTTTACAATACGCAGGGTGAGAAAGAATCTCTGACTTCGAGATCGATAGTATAATCTCACACATATTGAGTTATGCTATTTTTGGCTACATTTATCTTTCATTATACATGTACAATTTTTAGGTAATTTTTAATTTCATCCTTAATTTTTTAATATTTTTTATTTTACCCGTCATATAGGAAAATTTATCAAGTAGGTCGTCAAGGAAAAAAAGAATTAAAAACTTTTTGAAAAAAATGAGTGTATACCCCTAAATTTTAAGTGTCTTATCAATTAAACTCTTAAATTAATAGAACTTTTATTAGTGAATCAATTTAGAAACATTTTGTAAAATCACTTCAAAAACCCTTCATAAAATTATTCTTCTCCCAAATTTCTATTGAAGTAGTAAGGAAAGAACATTACATAATTCTTCATAAATAAATAGAAAAATGTATAAGTAGAAGAGAAGATACCCACTTAATGAAAGAAACTACTATATATATATATATATTGAGCATTGGTAGACAGACATGCCACTTGAAATAAATAGATTTTGGTAGTAAATGGATTGGATTTTATTAATAAAAAAAGTTGGGAATTAGTATGGTAAGAGCATCCAAGTAGCATACATCCACATGCCCAAATAGGTAAAATATAATAATTTTATGAAATGGCCTAATCCATAATTTTAATTTCTAATTAATTAAGGTTAGGTTTGAGAAATTTAAAAGCCTAAGGATCCAAAATGAGAACTACTTTGTAACTAATTTTAGTGGGTGGATATTAATAGGGATAGTTGTAAATAGAGCCTTAGTATATATAGCAACATTTTAAAAAAAATTGTAAATATAGCAAGATCTATCAGTGATAGACTTCTATAGTTAATAGACTTTTATGGTCTAGATAGACCATACATAAGAGTCTAAGCATAAAAATTTATCACTGATAGACTTTGCTATATTTGCAATTTTTTAAAAATGTTGTTATACACTTGGTTATTATCCATAAAATTACTATTCATGACAATTACTCATATTAATATCACATAATAATTTTAGGAGAAAAATCATGGTACATACGATTTCATCTTCGTGGACGCGGATAAGGACAACTACATTAACTACCATAAGAGGCTAATTGATCTTGTCAAAGTTGGGGGAGTAATCGGCTACGACAACACACTATGGAACGGTTCTGTCGTGGCACCACCTGATGCACCCATGCGTAAGTATGTACGATATTACAGAGACTTTGTACTAGAGCTCAACAAGGCCCTTGCTCTCGACCTTAGAATCGAAATCTGCATGCTTCCAGTTGGTGATGGAATCACTCTTTGTCGTCGGATCAACTGA ATCGTTTTAACTTTAACAACCACCCTGGTGAAGGCACGCAACCGTTCGATCTCAACCATGGCGACCAATGAGCAACAAGACCAGGCAGGAAGGCATCAAGAAGTCGGGCATAAGAGCTTGTTGCAAAGCGATGCTCTTAACCAGTATATTTTAGAGACAAGTGTGTATCCAAGAGAGCCAGAAGCTATGAAGGAACTTAGAGACTTGACAGCCAAACATCCTTGGAATATAATGACAACATCAGCAGATGAAGGGCAGTTCTTGAACATGCTGTTGAAGCTGATCAATGCCAAGAACACCATGGAGATTGGTGTCTATACTGGCTACTCCCTCCTCGCCACCGCCCTCGCTCTTCCTGACGATGGAAAGGACAACTACATTAACTACCATAAGAGGCTAATTGATCTTGTCAAAGTTGGGGGAGTAATCGGCTACGACAACACACTATGGAACGGTTCTGTCGTGGCACCACCTGATGCACCCATGCGTAAGTATGTACGATATTACAGAGACTTTGTACTAGAGCTCAACAAGGCCCTTGCTCTCGACCTTAGAATCGAAATCTGCATGCTTCCAGTTGGTGATGGAATCACTCTTTGTCGTCGGATCAACTGA ATGGCGACCAATGAGCAACAAGACCAGGCAGGAAGGCATCAAGAAGTCGGGCATAAGAGCTTGTTGCAAAGCGATGCTCTTAACCAGTATATTTTAGAGACAAGTGTGTATCCAAGAGAGCCAGAAGCTATGAAGGAACTTAGAGACTTGACAGCCAAACATCCTTGGAATATAATGACAACATCAGCAGATGAAGGGCAGTTCTTGAACATGCTGTTGAAGCTGATCAATGCCAAGAACACCATGGAGATTGGTGTCTATACTGGCTACTCCCTCCTCGCCACCGCCCTCGCTCTTCCTGACGATGGAAAGGACAACTACATTAACTACCATAAGAGGCTAATTGATCTTGTCAAAGTTGGGGGAGTAATCGGCTACGACAACACACTATGGAACGGTTCTGTCGTGGCACCACCTGATGCACCCATGCGTAAGTATGTACGATATTACAGAGACTTTGTACTAGAGCTCAACAAGGCCCTTGCTCTCGACCTTAGAATCGAAATCTGCATGCTTCCAGTTGGTGATGGAATCACTCTTTGTCGTCGGATCAACTGA MATNEQQDQAGRHQEVGHKSLLQSDALNQYILETSVYPREPEAMKELRDLTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALALDLRIEICMLPVGDGITLCRRIN Homology
BLAST of Lsi05G002230 vs. ExPASy Swiss-Prot
Match: O65862 (Caffeoyl-CoA O-methyltransferase 1 OS=Populus trichocarpa OX=3694 GN=CCOAOMT1 PE=2 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 1.2e-87 Identity = 172/246 (69.92%), Postives = 179/246 (72.76%), Query Frame = 0
BLAST of Lsi05G002230 vs. ExPASy Swiss-Prot
Match: Q43095 (Caffeoyl-CoA O-methyltransferase OS=Populus tremuloides OX=3693 PE=2 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 1.2e-87 Identity = 172/246 (69.92%), Postives = 179/246 (72.76%), Query Frame = 0
BLAST of Lsi05G002230 vs. ExPASy Swiss-Prot
Match: Q43237 (Caffeoyl-CoA O-methyltransferase OS=Vitis vinifera OX=29760 PE=2 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 5.7e-87 Identity = 169/245 (68.98%), Postives = 179/245 (73.06%), Query Frame = 0
BLAST of Lsi05G002230 vs. ExPASy Swiss-Prot
Match: O04854 (Caffeoyl-CoA O-methyltransferase OS=Eucalyptus gunnii OX=3933 PE=2 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 2.8e-86 Identity = 168/242 (69.42%), Postives = 175/242 (72.31%), Query Frame = 0
BLAST of Lsi05G002230 vs. ExPASy Swiss-Prot
Match: O65922 (Caffeoyl-CoA O-methyltransferase 2 OS=Populus trichocarpa OX=3694 GN=CCOAOMT2 PE=2 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 4.8e-86 Identity = 171/246 (69.51%), Postives = 177/246 (71.95%), Query Frame = 0
BLAST of Lsi05G002230 vs. ExPASy TrEMBL
Match: A0A6J1D7G5 (caffeoyl-CoA O-methyltransferase 5-like OS=Momordica charantia OX=3673 GN=LOC111017629 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 9.8e-90 Identity = 180/245 (73.47%), Postives = 182/245 (74.29%), Query Frame = 0
BLAST of Lsi05G002230 vs. ExPASy TrEMBL
Match: A0A6P5MXI7 (caffeoyl-CoA O-methyltransferase isoform X2 OS=Arachis duranensis OX=130453 GN=LOC107469696 PE=3 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 1.4e-88 Identity = 171/204 (83.82%), Postives = 180/204 (88.24%), Query Frame = 0
BLAST of Lsi05G002230 vs. ExPASy TrEMBL
Match: A0A5B6WL38 (Caffeoyl-CoA O-methyltransferase 2-like OS=Gossypium australe OX=47621 GN=EPI10_004666 PE=3 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87 Identity = 167/202 (82.67%), Postives = 178/202 (88.12%), Query Frame = 0
BLAST of Lsi05G002230 vs. ExPASy TrEMBL
Match: A0A7J7IAT8 (Caffeoyl-CoA O-methyltransferase OS=Camellia sinensis OX=4442 GN=HYC85_002547 PE=3 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86 Identity = 166/207 (80.19%), Postives = 177/207 (85.51%), Query Frame = 0
BLAST of Lsi05G002230 vs. ExPASy TrEMBL
Match: A0A1R3HUM8 (O-methyltransferase, family 3 OS=Corchorus capsularis OX=210143 GN=CCACVL1_16979 PE=3 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 6.6e-86 Identity = 175/246 (71.14%), Postives = 179/246 (72.76%), Query Frame = 0
BLAST of Lsi05G002230 vs. NCBI nr
Match: XP_022149136.1 (caffeoyl-CoA O-methyltransferase 5-like [Momordica charantia]) HSP 1 Score: 339.3 bits (869), Expect = 2.0e-89 Identity = 180/245 (73.47%), Postives = 182/245 (74.29%), Query Frame = 0
BLAST of Lsi05G002230 vs. NCBI nr
Match: XP_020989434.1 (caffeoyl-CoA O-methyltransferase isoform X2 [Arachis duranensis]) HSP 1 Score: 335.5 bits (859), Expect = 2.9e-88 Identity = 171/204 (83.82%), Postives = 180/204 (88.24%), Query Frame = 0
BLAST of Lsi05G002230 vs. NCBI nr
Match: XP_029152197.1 (caffeoyl-CoA O-methyltransferase isoform X2 [Arachis hypogaea]) HSP 1 Score: 335.1 bits (858), Expect = 3.8e-88 Identity = 171/204 (83.82%), Postives = 180/204 (88.24%), Query Frame = 0
BLAST of Lsi05G002230 vs. NCBI nr
Match: XP_020969309.1 (caffeoyl-CoA O-methyltransferase isoform X2 [Arachis ipaensis]) HSP 1 Score: 335.1 bits (858), Expect = 3.8e-88 Identity = 172/204 (84.31%), Postives = 179/204 (87.75%), Query Frame = 0
BLAST of Lsi05G002230 vs. NCBI nr
Match: KAA3482420.1 (caffeoyl-CoA O-methyltransferase 2-like [Gossypium australe]) HSP 1 Score: 332.4 bits (851), Expect = 2.5e-87 Identity = 167/202 (82.67%), Postives = 178/202 (88.12%), Query Frame = 0
BLAST of Lsi05G002230 vs. TAIR 10
Match: AT4G34050.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 312.8 bits (800), Expect = 1.9e-85 Identity = 163/242 (67.36%), Postives = 175/242 (72.31%), Query Frame = 0
BLAST of Lsi05G002230 vs. TAIR 10
Match: AT1G67980.1 (caffeoyl-CoA 3-O-methyltransferase ) HSP 1 Score: 174.9 bits (442), Expect = 6.1e-44 Identity = 97/229 (42.36%), Postives = 130/229 (56.77%), Query Frame = 0
BLAST of Lsi05G002230 vs. TAIR 10
Match: AT4G26220.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 171.0 bits (432), Expect = 8.9e-43 Identity = 96/226 (42.48%), Postives = 124/226 (54.87%), Query Frame = 0
BLAST of Lsi05G002230 vs. TAIR 10
Match: AT4G34050.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 169.5 bits (428), Expect = 2.6e-42 Identity = 78/85 (91.76%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Lsi05G002230 vs. TAIR 10
Match: AT1G67990.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 157.9 bits (398), Expect = 7.8e-39 Identity = 89/226 (39.38%), Postives = 125/226 (55.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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