Lsi05G001540 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G001540
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	cx9C motif-containing protein 4
Location	chr05: 2268039 .. 2270984 (-)
RNA-Seq Expression	Lsi05G001540
Synteny	Lsi05G001540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGACATCGCGAGAGAGAGAAATGCCTCCGCCGAGCAAAGAACCCTGCAAGAAGGAGGCGTGCGACATTCAAGCTTGTCTCTCCAAAAACAACTTTCTTCCTCACAAGTAACTTTACTTTAAGATTTTTCTTTCCAGTTTGTTTCCCGAGCAATCTGCGATGAAAGAATCTCTAGTTTTTAAGCTATTCATCGATGTTTTATGTTGTTCGATTGAGTCATTTGCATGAATCGGAGGGTAGAAGTGTTGAATTTGAATATTTCTTTCTTTCTTTGTTTTCCTGTATCTATTAACGAAACTCTGGACTGCTGTATGTCCTTTCTGTTTTGTGCTTGTTCTATCCTTTGAATTATCAATAATCTCCCTTTGCCGTGTGCGATCAAACAAAAATTTGATTAAGCAATGAAACAGGACAGCTTTTAGGTTTAATTCTTCGATGTGGATAACATTTTGGTTTTTAGTTTTGATCCGTTTTCTTTCCTCTTCATGTTTGGTTCATTGACCTACGTATTTAGACCCAGTATTGTAATCCTTGATTTGGGAATTTTCGGATAGCTTTCTGAGGCCTCTATCTGTTCGTAAGAATTTTGTATAATTTTGTGTTGCTTTGGACTATCTTTTGTTCATTTTTGAAATTGAGATGCATTTTCATGTACTTCTAATCTGATAATTAAAGATGAAGCTTATTTCCCATGTTCCGAAGATCAAATTACTTCTTTGTGGCTACAATAGGTTGGTCAGTCCTCCCGAATGATGTCTTCATGATTATAAGTGGAAGAAATATTTTCTATGAAGTTATGGTTTCTTATGAATTATCTAATTCTCATCCGCTCGTGTATATTCTACTCTGATTTTCAGCCCCTTCTATTAATTCATGAAGATCACCGAACTTACACATTTCCTAGATATTCTTGTTGTTTATTTGGGTACCAGAGCGATTAGTTTGTTTGATTTTCCTTTGTTATTCTCCCCTGCTAGAGGAACGGGAATTTACTGAAGATCATATTTCTATTTTCCACAAACCGTTTTCAATTTCTACTTCTATTACTCTGTCTCGCCAATGATAGATTGGCAGTGTAGTCTGTGCATGTGGAATATGGTATACAAAGCTCCTCCTTTCTTCCTCTTTTTTTCTTTTTTATCTCTTTTTATTGTTATCTTTTGGTAGTTTCTTCTGACTAGAGGTATAAATTTGGTGCATTTGTGCTGGAAGGTTGTTAAAAATGTAGATAATTGATGAACGGATTTTTTGTGACAATCAGATTTTAGCTCAAAGTTTGAAAGCTCACTGGTATTGACCACATTTGACAGGCTTAAGTCCAGTAGATGTTGAAGTATGTTCTTTTTTATGTTGTATGCATGAAGTGTCTGTCGTAGACTCGTAGTTCTATCATTCATACCTGATGAGTAAGAAGTTGGATTTGGATTCAAGTATATGCTAAAGGATGTGGTTCTTGGAAAACTTGCCTGCTGACCTAATTCAGGAGAAATGTTTTAACCTTCAAATTGCTGATCGACAAAAAGTTATAGGCATTATTTAGAGACACTTGTATTGAAAGAGAAGAACGTCCACCTAGATGATAGTGTTAATAATCCATCCCCATGTCCAAAAAAGCCAAGTAGATACAAATAGAAGCAGCAGCATGGATTTATTGTTTTCTGATCTCCCTGAAAGTAGTTCATAATGAAGTGGGCTTAAAAAAAAAACAAGAGCCTAGCTTGGAATTCAACCTGGGACTGTAAACAATAAACATCTTCAACAGCAATCCTTCATCTCAAGGGTTACTGTCAGATTTTAGCATAAAGCTTTTCCCAAGTTCTTCTAGCGAGAATGTAAAATCTTTGTTCTGCTTTGTTGCAGCTGTTTTAGCTCTCCATTCATCTCTCTTTCCAAAATCTTTCCAGTTGGAGAGAATCGATAAACATGTTGGTTTACACTAGAGATAAATAGATCATTACATCACCATCCTACTGCATTACATGGTTTGTGATAATGTTGAAGTTTGATAAGTGTCAATATGATGTGGATACTATTGTGCAGTTAAAACTTTCCAGGAAGTATAAAACCTAATCAACCTAATCCTTCCTTTTGTTTGTTTCCCTTCCCCCCGCTCCAAGAATATTACAACACATAATTTACGACCTTTTAAAAAGAGTAGGGATGCTTTAACATCCGAGTTATGTCGATGTAGACAAACATTTGAATTTTAGGGTTATAATAGGTTAAGCAACCTACTCCCTCCTTGGGAGGAATTGGAATGTTTTCTTATTTTATTTATTCTCCTATCAATGTGGATCAGCGATATGCTCTCGTTGTTCTTTTTGGAAATGGCTGCTTGTCCTCTTAACTCTTAGATATTCATAACACTTTTTGTTTATGTGATGGGAAAGGCTTTTGCATGTAGATATATTGATATGTTCCTAAAGCAATTTGTGCATTGACATGGTTGTAGGTGCGTCAGGGTCATTCAACTATTGCAATACTGCTGTGAGAACTGCAATTACAAATCAACACATTGTGCTTCTGTTTCTGACCTCTTGAAGCAAATGCCAAAGCCGAAAAGCCAGAAATCTTGATTCAAGACATCTCGGATGTAATTCAATTCATCACTGGCTATTGCTTTTACCTCGAACCAACGATGAAGGAAGCTAGAAACGAACCACATTTTGCAAAATAGGTGAAGGAAAAGAGATGAGACCAAAGGGGTCAAATATTTGATGGATCAGTCAAGAGCTAATAAAGTTGCCATTTCTTCCCAATCATTCATCGAGCAATCCTTTATAACAAAATATTTTAATTCTTTATCTCCATGTTAAACCATGATACAGATTGACGACTAATTTTGACCCTGTTTCAGTTTGTAATTTTCTGTTTTGGACACAACAATTACTTGAAAGAATCAATTAAACTTGAATGATATGCTTTCCAAGTTAGTGGATCTCAA

mRNA sequence

GTTGGACATCGCGAGAGAGAGAAATGCCTCCGCCGAGCAAAGAACCCTGCAAGAAGGAGGCGTGCGACATTCAAGCTTGTCTCTCCAAAAACAACTTTCTTCCTCACAAGTGCGTCAGGGTCATTCAACTATTGCAATACTGCTGTGAGAACTGCAATTACAAATCAACACATTGTGCTTCTGTTTCTGACCTCTTGAAGCAAATGCCAAAGCCGAAAAGCCAGAAATCTTGATTCAAGACATCTCGGATGTAATTCAATTCATCACTGGCTATTGCTTTTACCTCGAACCAACGATGAAGGAAGCTAGAAACGAACCACATTTTGCAAAATAGGTGAAGGAAAAGAGATGAGACCAAAGGGGTCAAATATTTGATGGATCAGTCAAGAGCTAATAAAGTTGCCATTTCTTCCCAATCATTCATCGAGCAATCCTTTATAACAAAATATTTTAATTCTTTATCTCCATGTTAAACCATGATACAGATTGACGACTAATTTTGACCCTGTTTCAGTTTGTAATTTTCTGTTTTGGACACAACAATTACTTGAAAGAATCAATTAAACTTGAATGATATGCTTTCCAAGTTAGTGGATCTCAA

Coding sequence (CDS)

ATGCCTCCGCCGAGCAAAGAACCCTGCAAGAAGGAGGCGTGCGACATTCAAGCTTGTCTCTCCAAAAACAACTTTCTTCCTCACAAGTGCGTCAGGGTCATTCAACTATTGCAATACTGCTGTGAGAACTGCAATTACAAATCAACACATTGTGCTTCTGTTTCTGACCTCTTGAAGCAAATGCCAAAGCCGAAAAGCCAGAAATCTTGA

Protein sequence

MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQMPKPKSQKS

Homology

[Close]

BLAST of Lsi05G001540 vs. ExPASy Swiss-Prot
Match: Q61908 (Cx9C motif-containing protein 4 OS=Mus musculus OX=10090 GN=Cmc4 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.9e-07
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0


Query: 4  PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC 42
          P K+PC+K+AC+IQ CL  NN+L  KC  VIQ L+ CC
Sbjct: 2  PQKDPCQKQACEIQKCLQANNYLESKCQAVIQELRKCC 39

[Close]

BLAST of Lsi05G001540 vs. ExPASy Swiss-Prot
Match: Q0VBY0 (Cx9C motif-containing protein 4 OS=Bos taurus OX=9913 GN=CMC4 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-06
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0


Query: 4  PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC 42
          P K+PC+K+AC+IQ CL  NN++  KC  VI+ L+ CC
Sbjct: 2  PQKDPCQKQACEIQKCLQANNYMESKCQAVIEELRKCC 39

[Close]

BLAST of Lsi05G001540 vs. ExPASy Swiss-Prot
Match: P56277 (Cx9C motif-containing protein 4 OS=Homo sapiens OX=9606 GN=CMC4 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.1e-06
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0


Query: 4  PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC 42
          P K+PC+K+AC+IQ CL  N+++  KC  VIQ L+ CC
Sbjct: 2  PQKDPCQKQACEIQKCLQANSYMESKCQAVIQELRKCC 39

[Close]

BLAST of Lsi05G001540 vs. ExPASy Swiss-Prot
Match: B5RTE0 (Cx9C motif-containing protein 4, mitochondrial OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=CMC4 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.5e-05
Identity = 24/58 (41.38%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 7  EPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC-----ENCNYKSTHCASVSDLLK 60
          +PCK EAC IQ CL +NN+   KC ++I  L  CC     +N + K T C    +LL+
Sbjct: 9  DPCKPEACAIQDCLQQNNYNESKCSKIIDNLYLCCKKYYEKNGSDKQTTCCPKFNLLQ 66

[Close]

BLAST of Lsi05G001540 vs. ExPASy TrEMBL
Match: A0A6J1IZQ2 (cx9C motif-containing protein 4, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111482123 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.5e-32
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ
Sbjct: 15 MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 74

Query: 61 MPKPKSQKS 70
          MPKPK QKS
Sbjct: 75 MPKPKGQKS 83

[Close]

BLAST of Lsi05G001540 vs. ExPASy TrEMBL
Match: A0A6J1FQS9 (cx9C motif-containing protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111447360 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.5e-32
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60

Query: 61 MPKPKSQKS 70
          MPKPK QKS
Sbjct: 61 MPKPKGQKS 69

[Close]

BLAST of Lsi05G001540 vs. ExPASy TrEMBL
Match: A0A6J1C3Y6 (cx9C motif-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111008166 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.8e-31
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCV+VIQLLQYCCENC+YKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVKVIQLLQYCCENCDYKSTHCASVSDLLKQ 60

Query: 61 MPKPKSQKS 70
          MPKPK QKS
Sbjct: 61 MPKPKGQKS 69

[Close]

BLAST of Lsi05G001540 vs. ExPASy TrEMBL
Match: A0A1S3C3J8 (cx9C motif-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103496091 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.8e-28
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQ CCE+C+YKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQLCCEDCDYKSTHCASVSDLLKQ 60

Query: 61 MPKPKSQKS 70
          + KPKSQKS
Sbjct: 61 I-KPKSQKS 68

[Close]

BLAST of Lsi05G001540 vs. ExPASy TrEMBL
Match: A0A0A0LC41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G228340 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-27
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MPPP KEPCKKEACDIQACL+KNNFLPHKCVRVIQLLQ+CCENC+YKSTHCASVS LLKQ
Sbjct: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60

Query: 61 MPKPKSQKS 70
          + KPK QKS
Sbjct: 61 I-KPKGQKS 68

[Close]

BLAST of Lsi05G001540 vs. NCBI nr
Match: XP_023539532.1 (cx9C motif-containing protein 4, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 146.4 bits (368), Expect = 9.4e-32
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ
Sbjct: 13 MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 72

Query: 61 MPKPKSQKS 70
          MPKPK QKS
Sbjct: 73 MPKPKGQKS 81

[Close]

BLAST of Lsi05G001540 vs. NCBI nr
Match: XP_022983557.1 (cx9C motif-containing protein 4, mitochondrial [Cucurbita maxima])

HSP 1 Score: 146.4 bits (368), Expect = 9.4e-32
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ
Sbjct: 15 MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 74

Query: 61 MPKPKSQKS 70
          MPKPK QKS
Sbjct: 75 MPKPKGQKS 83

[Close]

BLAST of Lsi05G001540 vs. NCBI nr
Match: XP_022942264.1 (cx9C motif-containing protein 4 [Cucurbita moschata] >KAG6600374.1 Cx9C motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031034.1 Cx9C motif-containing protein 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146.4 bits (368), Expect = 9.4e-32
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60

Query: 61 MPKPKSQKS 70
          MPKPK QKS
Sbjct: 61 MPKPKGQKS 69

[Close]

BLAST of Lsi05G001540 vs. NCBI nr
Match: XP_038884221.1 (cx9C motif-containing protein 4 [Benincasa hispida])

HSP 1 Score: 144.8 bits (364), Expect = 2.7e-31
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MPPPS+EPCKKEACDIQACLSKNNFLP KCVRVIQLLQYCCENC+YKSTHCASVSDLLKQ
Sbjct: 1  MPPPSREPCKKEACDIQACLSKNNFLPQKCVRVIQLLQYCCENCDYKSTHCASVSDLLKQ 60

Query: 61 MPKPKSQKS 70
          MPKPKSQKS
Sbjct: 61 MPKPKSQKS 69

[Close]

BLAST of Lsi05G001540 vs. NCBI nr
Match: XP_022136460.1 (cx9C motif-containing protein 4 [Momordica charantia])

HSP 1 Score: 143.3 bits (360), Expect = 7.9e-31
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP PSKEPCKKEACDIQACLSKNNFLPHKCV+VIQLLQYCCENC+YKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVKVIQLLQYCCENCDYKSTHCASVSDLLKQ 60

Query: 61 MPKPKSQKS 70
          MPKPK QKS
Sbjct: 61 MPKPKGQKS 69

[Close]

BLAST of Lsi05G001540 vs. TAIR 10
Match: AT1G09794.1 (Cox19 family protein (CHCH motif) )

HSP 1 Score: 104.8 bits (260), Expect = 2.9e-23
Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 1  MPPPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          M  PSKEPCKKEACDIQACLSKNNFLP +C RVI++LQ CCE CN +STHC SV+ LLKQ
Sbjct: 1  MAQPSKEPCKKEACDIQACLSKNNFLPQRCQRVIEMLQACCERCNNESTHCGSVAALLKQ 60

Query: 61 MPK 64
          + K
Sbjct: 61 IKK 63

The following BLAST results are available for this feature:

BLAST of Lsi05G001540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q61908	4.9e-07	57.89	Cx9C motif-containing protein 4 OS=Mus musculus OX=10090 GN=Cmc4 PE=2 SV=1	[more]
Q0VBY0	1.8e-06	52.63	Cx9C motif-containing protein 4 OS=Bos taurus OX=9913 GN=CMC4 PE=3 SV=1	[more]
P56277	3.1e-06	52.63	Cx9C motif-containing protein 4 OS=Homo sapiens OX=9606 GN=CMC4 PE=1 SV=1	[more]
B5RTE0	3.5e-05	41.38	Cx9C motif-containing protein 4, mitochondrial OS=Debaryomyces hansenii (strain ...	[more]

BLAST of Lsi05G001540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IZQ2	4.5e-32	97.10	cx9C motif-containing protein 4, mitochondrial OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FQS9	4.5e-32	97.10	cx9C motif-containing protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111447360 PE...	[more]
A0A6J1C3Y6	3.8e-31	94.20	cx9C motif-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111008166 P...	[more]
A0A1S3C3J8	8.8e-28	91.30	cx9C motif-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103496091 PE=3 SV=...	[more]
A0A0A0LC41	2.6e-27	88.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G228340 PE=3 SV=1	[more]

BLAST of Lsi05G001540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539532.1	9.4e-32	97.10	cx9C motif-containing protein 4, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022983557.1	9.4e-32	97.10	cx9C motif-containing protein 4, mitochondrial [Cucurbita maxima]	[more]
XP_022942264.1	9.4e-32	97.10	cx9C motif-containing protein 4 [Cucurbita moschata] >KAG6600374.1 Cx9C motif-co...	[more]
XP_038884221.1	2.7e-31	95.65	cx9C motif-containing protein 4 [Benincasa hispida]	[more]
XP_022136460.1	7.9e-31	94.20	cx9C motif-containing protein 4 [Momordica charantia]	[more]

BLAST of Lsi05G001540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09794.1	2.9e-23	74.60	Cox19 family protein (CHCH motif)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.1130	CytochromE C oxidase copper chaperone	coord: 3..68 e-value: 1.4E-16 score: 62.2
IPR027179	Mature-T-Cell Proliferation I type	PFAM	PF08991	MTCP1	coord: 8..61 e-value: 8.6E-14 score: 51.5
IPR027179	Mature-T-Cell Proliferation I type	PANTHER	PTHR15590	CX9C MOTIF-CONTAINING PROTEIN 4	coord: 3..63
IPR009069	Cysteine alpha-hairpin motif superfamily	SUPERFAMILY	47072	Cysteine alpha-hairpin motif	coord: 5..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G001540.1	Lsi05G001540.1	mRNA