Lsi05G001120 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G001120
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding KH domain-containing protein
Locationchr05: 1846754 .. 1856014 (+)
RNA-Seq ExpressionLsi05G001120
SyntenyLsi05G001120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTGAAGCTGATCTGATGGATTCCTATTTGCATAATAATAATAACTTCTCTTCGTCTTCTTCCTTGTCTTCTTCTTCTTTTTCTTCTTCTTCTAGGGTTTGTAATTGCAACAGTCTTATCGGATTTTCATTTGTAAACAAGCAGAAAGACGGAATTGAAGGAACGGAGTGAGTTCTGAGGTTATTTTATTTTGTTTTTTTGGGTTGGAAACAGAGGAATCTGACCTACTTACGAGTTAGAGATATTGAAACCCTTTTACTCCGGCAGATTGAAAACAAAACTTGGAAAATCAAAACCATTGACAAAGAATTTCTATGACTGTAATTGCTTGGCATTGAAAAGAACTAAACCAGGGTGGGTAAGCATTATTTTTTGTCAATCCAAAACCCTAACATTTTGAGACATGGAGAAGTCTAGATCTAAGAGAAACTACTACTATGACCACCAAGACTATGATTCGGAGTCGATGGGTAGAACCAGACCTCGTTACAACAACAATCACTACCCAAATAATAACTATCGTCACCGTGGGAATGCTGTTCGACCGTCTAAACCTCAAGACCAATCTCTTATGGTCACCACCACTTACAGGATACTCTGTCATGATGCTAAGGCTGGGGGAGTTATCGGCAAATCTGGCAGTATTATTAAGTCCATAAGGCAGCACACCGGCGCCTGGATCAACGTGCATGAGCTTGTTCCCGGTGATGAGGAGAGAATAATTGAGATATCGGACACTCGGCGGCGGGACCCGGAAGGCCGGATGCCGTCGTTCTCTCCGGCCCAAGAAGCACTTTTCTTGATTCATGAAAGGATTCTCGAGAGTGAAATGAGTCCTGGATTTAATGGAATGGGGTACGGTCCTGAAGATGAGGAGGATGATTACGGTGGCGTTAGAGGAGGAGCTGGCGGTGGCGTTGGTGGCCGTGTGGCGACAAGGCTTGTTGTGTCTAGAATGCACGTTGGTTGTTTGCTTGGGAAGGGAGGGAAGATAATCGAGCAAATGAGGATGGAAACCAAGACCCAGATAAGGATTCTACCTAGAGATCACAATTTGCCTCGTTGCATTTCAATGTCGGAGGAGATTGTTCAGGTTTAGTTTCTGAACACTTCAGTATCTTGAAAGAGTACCCGCTTTCATATTGTTATGATAGTTTAAAAATTATTGAGCTTGGAATTCCTTTTGATTCAAGCTGACTCCTCTACCTCTTCCTCAGTCCGGGTGATTCTACTCATTCCGGGTCAGGTTCAAAGGACGCTACTTTACTTTTTGTATGCTTAACCGAAGTTGCTAATTGGGTGCTTGGAAGTTAGAACATGTTAGAACGTTTAATAAGACAATACTCAAAAGGGTATCTATGAGCAGTTTAATAATGAAGTGACGGGTTCTTTGAATCTGCTGCTGTCCTGTATTTGCTTCAATAGCTATTTGAGAAACTAATAGAGTTTGAGCTGAAATCGTATGTGTTCAGAACTCATCAAATTTGCTTCTTACTGCACATCTTACTTGATGAGTGTGTTTAGAAAAGCTAGTCAAATTGCCAGAAACGTTTTCTTTGGGGACGTCTCGGTTATCTTGCATATTTAATTTGTTCAGTCTTTTGATCTGCTGATTCCTATTGTTGAATTAACTTACTGAATTCCATTTCTAATGCTATATACAATGTCCGGGGAAGTCTGTTCTTTTCATTTCTAGTTTCTGTCTGTTTGTCAGGGCAGCGGTCTACAGTTTTAACTTTCCCTTAATATCATTTGGACTTGTTAAATATACAGTAAAGATATAAGAGATGGCAGTCTTTCATTTGGTTGTATCTTTGCTTATATGAGCATGTGGTCTTTTTTAGCAGGTTGCTTAAATTCTGGTATTTCACAGATTGAAGGTTTAAAAGCTGTATTGGAATAACTTATGTAAGGTTTGTGTTAGAATCTATTAGATGTGCGTCGGAGTTCCAACTTTTGGTGCCAAGTTCGGCCCCTCAGCCATCTACGATAGCTAACTTACCAGGCTATAGATAACTTAAACACGATCACTGTCTTGATGCAAAATGAATTAAGGAAAAAGATATGGTGACAGGAAAAATTTAAGTTTCTTTTTGTTCTAAGTTCTCATGACTTCATTATTCCATTCGTTGAATTATGAATAACATATATGTATTAACTACTTTCCCTGTTGGGTTTATAACCCTCTGTAGATTGTTGGAGATGCAAATGCCGTAAAGAAAGCTATAGCTATTGTTTCATCACGCTTGAGAGAGAGTCAGCATCGTGACCGTAGTCATTTCCATGGGCGTCTACATTCACCGGAACGTATTTTCCCTCCTGATGATGATTATGTTCCACATAATGCACGGCGATTATCAATGGATGGACGGCCATTTAGACCACGCATGCCTGCTTCTAATACAAGAGGCAATGACTATTCCAACCGTCAATCTAATTTTTTGGTGGAGCCTGGGGCTGCTCCTGTAAATGACAATATGCCCTTTTATGGTGAGGACCTTGTATTTAGAATATTATGCCCAGTTGATAAGGTAGATAATGTTATTGGAGAGTCTAATGGAATCATAGAATTACTTCGGAACGATGTTGGTGTGGATATCAAGGTTTCTGACCCTGTGACTGGTTCAAACGAACAGATTCTTATCATTTCCTCAGATGAGGTACTTCAACTTTCTTTTGCCTTATTAGCTAGCATACATCATGATTTACTGTTCCCAAGGGTCAAATCGCTTGAGTATGGCTTTCCTAGCAGAAGATGTATTAGGAGTTATATAAATAACCATTGAACTGACTTTAAAAGTTATGTTTTCCATTTATGTATTCATATTTTCCTTGTTTAACTTTCTGTTTGGAAAATTTGAGTTCTTAGGGTCCAGATGATGAGCTTTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCGCATTGTTGATCTTGTTCCTGATAAGGATAACATTGTAACTACTAGGTTACTTGTACCATCAAGTGATATTGTATGTTTGGAGGGAAGAGATGGATCATTGTTAGAGATGAAGAGATTAACTGGTGCAAATGTACATATTGTGCCAAGAGAAGAACTTCCCATGTTTGTATCAGGGGCGGATGAGCTTGTACAGGTTTGTCATTGAACTTTAAATTGATAGGAGCTCTTAGAATTTATTAAAGATGCTTAATGTAACTTATTTTATTTTATTTTACTTTTTATGTTAAATTCTTCTTAAATCAGTTACAGAGCATGGCCATGGACGGTAAAAGTTAGCTGTCTTTGAACCATTGTATATCTGGCTGGTAAGAACTGATGATTTTGCATTCTGAATTCCTAATTCCCTAACTGCAATATTTGTAGATCATAGGGGACATAAAAGCAGCTCGAGATGCACTTGTTGAGTTAACATCAAGATTACGGAATTACCTTTATAAGGAGCCATTCCAAAAAGATGCAAGCCCTCCAGTCTCAGCACAAAGTTTAGGACTCGAGGAATCATCTTCAAATAATAATGCCGCAGCTCGTGAAGTTCATAGTGGAAATGATTGTTCAAGCACCGCCTTTCAAAATGTGCAACCTTTTGGAACAGCACAGCTTTTAAAGGTTACTTGTTTTCTTATCTTTTTTTTCTTCTCTCTTGACAAGGCGATTCTTTCTTTTCAAAACAGTCTCTTCTCAGCCTTTGTGAGTGGAGGCACTTTCTTTCTTTGGATACGAAACTATTTCAGAGTAAGGTTCTTCTGGAAACTGCTTCCGCATAAAATTGCTCTCTTCTTACGGTCAAGTAGTAAAAAACTAAACTGAGATCCCAAGCATTCATGTTAAATCACTTGAGGCATAGGTCACTAGCAATTTTATAAAATCCAATCTGCCAGTAGTTGTTTTTAGTAGTCATATGGTGATTCAAGTTCCAATCTGGTGAGAATGAAAAAGTCAGGTTATTTTCTTTGGATGTGTCTACTGGAAAAAAAAATGTGTTCTGGCCAACCTAGGTGAACATGGTTTCTAATTTCTATTATGGATCTTCTTATATGTTTCTATCGCATTATCATTTAGGAGTATATATTGCTTTTGTAACATTCCTGGAGCACTCCGTAAATTATCTTGCATTTTAGTGCACACCTCTTCTGAGACTTTGGTTATGAACCAAAACAATTCAAACTATCATTTGCAGGAAACTGGAGCGTCGAGCAATGAAACTGGTATGCAGAATGAAAATGACCGACGTGAAGAATTACCTAGTGGGTTAAATAGGTAGAACTTCATCTCTCTGCAATGCTGATTCCTCCCCTCCCCCATTTCTTTTGGATCAATGGGACGATTTGTTAGCTACAAATGATTCCATGGTCCAATCCTTCCGTCTTTTACACGCTTCTCTCTCAAGTCTTAGTTTGTTCTGCTTCTTTTATAAGTTAGATCAATGATTATCTATTCATCTCTTAGGATCCCTGTGCCGCTTGTCACTCGGAGTACACTTGAAGTTGTGATACCAGAGCCTGCAGTCCCCAAGCTTATAACAAAATCAAAAAACAAGCTTGCTCAGATCAGTGAGGTAGTATTGGTGAAATTTTGCCATACCCTTCATGTAATATATTAAGAAAATGCCTTATTGGCTCTGATGGTTTGGCTTTAACAGTTGTCTGGAGCCAATGTTACGTTGGTAGAAGATAGACCAGATGTAACCCAGAAGATAATTCAAATATCAGGCACACCAGAGCAAGCTGAGAGAGCCCAGAGCTTGTTGCAAGGCTTTATTTTGAGCTGTAAGTCTCTCTCACTAACCCATTTTGTTTTACATTTCTAATTGTATTTGGCCTTTGGGAAATTGTAAAAAATAACCCTAAAATATTTTCATCTTTCACCACTAGCCCCTTTTGGAAAACTCGAAATTTGACTCTTTTTATCGTACATCCAAACTACTTTTTTGGGTTTTTTTGGGGTCGATCTTGGCCGGAAGGACGGAGAAAAACTATTCTATTTCAATGAATTGCCAAAAAAAAGTGCTGGTTGTGAAAGATGAAAACTTTTGGAGGTTATTTCTGACAATCTTCCCGGACTTTTTTCTCTGTATTCATTTATTTGTTTAACATTTTTCAGTGCAAGAAGATGGTCCATAAGTTTTGACCATTTGGTTCTACACTAAACTTTAGTTGGCCATAAAAGGTTATTGCCCCCATCAAGATAAACTGTATCATCCCGGGGCTCTTGCTCTCTTTTCAGCTGTTTTTTTTTTCTGGGAGAGCGATGCAGGAAGACGGAGCAAGATTAACCATTGCCATGTAAATTAAGAATGTATAAGAGTTTTTCATTCTTCACTCTCTTTTCTTCCTTTTGCTGTTTCACAAATATTCATGTTTGTAGGAAGCAATATCGGTGTCATTCATCTCAATAGTTATTGAAATCTAATTTAAAGCAGCTGTTAGTTTTTGTTAAGCTTAATTATGTCAATCATCATAGGTAAAGTAAAAATTTAGTCCATTCCATAGCTGTCTATTGTATTTCAATTTTAAATTTTGAATTTGGATTTGATATAACTTCTAACACAATTTTTGACTTTTTTGTTTTCTTTTTTAAATGATGACTTAATACTTGATAGATGGTTATGTAGTCTTTCTGAAGAATGATACTTGGTTTATAACATACTAATAATTAGTAAAATATATCTTGGTTTGATAAGAAGTAGATTGATGATTAAAATGATTGTTTCTTCCCTGAGCGACAAAAAAAAAAAAAAAAAAAAAAATTAAGGTCGTGTTTGGATTGACATTCTAAGTGTTTAAATAAGTGTTTCTAAATGTAAAAGAAATGTTTATAAACACTAACAAAGTCAATCCAAATGGGCTCTAAATATAACATTATAAATCTCATTCATGAAAATTTTGCTATATTGAGCTTGATTTTGCTGCACAAAGGACTAAATACATGCAATTTTATGTCAAAATAATTAGATTAGAAAAGCAAGATAATTCTAAAAAAATGAGAATTATCACATCCCTTAAAAGGTTAGACTTCAATTCATTGCAAGAAATAATAATAAAATAAGGGTAAAATATGATTTGGTTCCTACACTTTGAAGTTTATTTAATTTTAATTTATATACTTTCATGGTCTAATTTTAGTTCTTTCAATAAATCTTAAATTTAGTCTCTAATATTATTTATTGTTGATTTTTAAAAACTTTTTATTATCTATGAGCATTTTTACTATATATTTGAAAAACATATTCCTATATAATATTTTTTTTATGAAAATTATTAAGAAAAAAAAAATACTTTTTTGACTCCAAGGTAGGTAGTTTCTATTAGGTCCCTAGGTTTTAAAATATTACACATTTAGACATTAAGTTTTAATTTTGGTTTCAAATTAGTCCATAAGTTTCAAAATGTTACAATTTATCTTTGAGATTTGAGTTTTGTTTCAATCTTGTCCATAAGTTTAAGGATTTTACATTTTCAATTTCTCTTTTTCATTAAATACTCTCATTGACATTAATGTCTACTAATTAATTTGAATTAATTATGAAGTAAAATTTTAAATTTAATTTTAAAAGTGATGAAAAATTGTGAAACTTAATTAATTATAATTCTTTTAATTCTATAAAATTTATTAAGATAGATTAATACTAAAGACGAAAAATGAGTATTTAGTGTAAAATCAAAGTTAAAAGTGTAAATCTTGAAATTTAGGGATTAAATTGAAACAAAATTCAAATATCAAAGATAAAATTGTAATTTTTGAAACCTAGGGACTAAATTGAAACCAAACTCAAAACTTAAGGACTAAATGTATAATATTTTGAAACCTAGGGACCAAAAAATATTTTTTTTCTAAATTATTGTTATTATTTAACTAATTTCGATAAAAAATTAATTTTTGGAGAATAAATTTAAAATTTATTGAAAGTATAAAGACTAAAATTAAATAATTAAAAATATATAGACAAAAATCGAACCAATTTCAAAATAGACCAAAATGGTAGTTTGAAAAGAGAAAAAGGGTAAAATCTCTTATAATTTAGAAGAGTACATTTTTCAAAACTTTTCCGAGGAGGTGGGTTATTGATCAGAAAATGGAAGTTTAATAGTATCATCCGAAAATGAAGATAGAAGGAACAGCGATGAGTATTCCAATCCCAACACTCTCCTTTGCTTCGCCTGTAATCACTCTCTCTTTCTCCTTTCTCCTTTCTCTGTTTGATTCTTCTCCCAATGATGTCGGAAACTTTAATATGGATATTCTGTTTGATCTTACCTTCTCTTCCAAAATTCATCCAATTTTGCTTATCTTGGGGTTTTCTTTCAGTTGTTGCCGCACAAGATTGAGGTGAAGCCCCGAGTTTCTTCTGCCTTTAACTTTCGTCCCCCGTTTCAGGTTAACATTTCACAGATTTTCTCAACAACCCACTTACTAATCTTCTCTTTGTCTCTCACTCTTCGTGTTTTTCTTGTTTACGTTTTCAGGTGGTCGCTAGAAAACAGAGAAATAGTGAAGGTAGTGGCCGGCGAGTGTGGCGACGAAGAAAATTGGTATGGTGAACCTGCTTTGTTCTTTCCCTTAATTTCTCACCTACCCTTTATCGTTTGTTTCATTCGTTTCCCATTTCATGTCTCTCTGAAACTGAACGATTCTTGTAATGTTTGTGCTAATTCGATCTAAATTTCCTTTAAAAAAAACAAAGAGAGTGAAACTGTGAAAGGACATAGTTTTTGTAGGGATATGTCGTGTATTGTAACTGCCTGAAGCATTGGGAGCAGGAATTTCTCTCTTTTGTGGAGTCTATTACTCTTATTTTCGGTGGCTTTTGTGAGTAAATGCATGTTACTGCCTTCTGTTGGAGTGCATTACATTATCTTTTTATGATAACATACCATTTCTTTGATTAACCTAGATTGGGTGTATAACAGTTGCCAACTTTCCTCTATCAGGGCCTCTAGGTTGTTCTCTTTTTATGTTTATTTTTCCTTAATATATGGTTTCTTCTATTAAGAGAGAGAGAGAGATTTTGTTCATGCCTCCTTGTGGTTAGTGTTTCTCTGCTATTAGTAATGTATGTGAACTACAGTATACAACAGAGATGTGTAAACTTTGGAAAAAAGTAACCCAAGTTATTTGGTGCTTTTTGTGGCGAATATTGGAGATGTTATGCTTGTTATAGCTTCTGTTTTGATTAATGCAACCCAATGCATGGTGTTTTATTGATAACTATTTAAGGGTACATTTGGATTGACTGCCTAAATGTTTAAATAAGTGTTTATAAGTGCAAAAAAAATGTTTATAAACACTTAGAAAGTCAAACTTTGGGTGTTAGTGATGATTAGGACACAAGCACCATGGGTAGTTAAAAACACTAGAGTATGTGGGGTCCTGGGTTCCTGGTGGTATTCAAATCCAACAAGTTTCTTAGTAACATGGTAGATCAGGCAGTTGTCTAGATGAAATTAGGTGAGATGTGTAGATTGGCTCTGATACTTATAAGAAAAATAATGATATGGACTGTAAACTTAGTGTAGGATTAGGTGGAATGATTATACATTGAGATGATTGATCACCTTCAACCAGACTTTTGATACTGCTTGCTATTATTGGGATGCAAACTATGCAATATTCTTTAGGTGGAAAGGTGTAAATATTGGGAGTAATTTCTTGAAACAAACAGAATTCTGAGGATCGTTTTGGATTATAGGCCACTTTCTTGCAGATAAAAAACCGGGTTCACGAGGGAGAGGGGCGCTTTGTTTTCGTTTTCTAAGTTTTCAAAGACTAAAGAATTGGATCAAAAGGGGGAGGGGGGAGGGCGGGGTGACCTTTTTTCTTTTAAAATTGAAATCTTTTTTTGATATGGAACAACTTTGGCGATAATTAGTTAAAATCATGTATCATTATTTTGAAAGAGTTTGTTATGTCGTTGTCGATGACATTGAAACTTTCAATTTCAGACGAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTCGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTGGAGAGCAACCGTGATGAATATGGAGGTTCCAAGAAAGCCATTCTTCACGTTCTTAGCAACCGAGTGAATGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAACAAGAATATACTTGA

mRNA sequence

TGGTGAAGCTGATCTGATGGATTCCTATTTGCATAATAATAATAACTTCTCTTCGTCTTCTTCCTTGTCTTCTTCTTCTTTTTCTTCTTCTTCTAGGGTTTGTAATTGCAACAGTCTTATCGGATTTTCATTTGTAAACAAGCAGAAAGACGGAATTGAAGGAACGGAGTGAGTTCTGAGGTTATTTTATTTTGTTTTTTTGGGTTGGAAACAGAGGAATCTGACCTACTTACGAGTTAGAGATATTGAAACCCTTTTACTCCGGCAGATTGAAAACAAAACTTGGAAAATCAAAACCATTGACAAAGAATTTCTATGACTGTAATTGCTTGGCATTGAAAAGAACTAAACCAGGGTGGGTAAGCATTATTTTTTGTCAATCCAAAACCCTAACATTTTGAGACATGGAGAAGTCTAGATCTAAGAGAAACTACTACTATGACCACCAAGACTATGATTCGGAGTCGATGGGTAGAACCAGACCTCGTTACAACAACAATCACTACCCAAATAATAACTATCGTCACCGTGGGAATGCTGTTCGACCGTCTAAACCTCAAGACCAATCTCTTATGGTCACCACCACTTACAGGATACTCTGTCATGATGCTAAGGCTGGGGGAGTTATCGGCAAATCTGGCAGTATTATTAAGTCCATAAGGCAGCACACCGGCGCCTGGATCAACGTGCATGAGCTTGTTCCCGGTGATGAGGAGAGAATAATTGAGATATCGGACACTCGGCGGCGGGACCCGGAAGGCCGGATGCCGTCGTTCTCTCCGGCCCAAGAAGCACTTTTCTTGATTCATGAAAGGATTCTCGAGAGTGAAATGAGTCCTGGATTTAATGGAATGGGGTACGGTCCTGAAGATGAGGAGGATGATTACGGTGGCGTTAGAGGAGGAGCTGGCGGTGGCGTTGGTGGCCGTGTGGCGACAAGGCTTGTTGTGTCTAGAATGCACGTTGGTTGTTTGCTTGGGAAGGGAGGGAAGATAATCGAGCAAATGAGGATGGAAACCAAGACCCAGATAAGGATTCTACCTAGAGATCACAATTTGCCTCGTTGCATTTCAATGTCGGAGGAGATTGTTCAGATTGTTGGAGATGCAAATGCCGTAAAGAAAGCTATAGCTATTGTTTCATCACGCTTGAGAGAGAGTCAGCATCGTGACCGTAGTCATTTCCATGGGCGTCTACATTCACCGGAACGTATTTTCCCTCCTGATGATGATTATGTTCCACATAATGCACGGCGATTATCAATGGATGGACGGCCATTTAGACCACGCATGCCTGCTTCTAATACAAGAGGCAATGACTATTCCAACCGTCAATCTAATTTTTTGGTGGAGCCTGGGGCTGCTCCTGTAAATGACAATATGCCCTTTTATGGTGAGGACCTTGTATTTAGAATATTATGCCCAGTTGATAAGGTAGATAATGTTATTGGAGAGTCTAATGGAATCATAGAATTACTTCGGAACGATGTTGGTGTGGATATCAAGGTTTCTGACCCTGTGACTGGTTCAAACGAACAGATTCTTATCATTTCCTCAGATGAGGGTCCAGATGATGAGCTTTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCGCATTGTTGATCTTGTTCCTGATAAGGATAACATTGTAACTACTAGGTTACTTGTACCATCAAGTGATATTGTATGTTTGGAGGGAAGAGATGGATCATTGTTAGAGATGAAGAGATTAACTGGTGCAAATGTACATATTGTGCCAAGAGAAGAACTTCCCATGTTTGTATCAGGGGCGGATGAGCTTGTACAGATCATAGGGGACATAAAAGCAGCTCGAGATGCACTTGTTGAGTTAACATCAAGATTACGGAATTACCTTTATAAGGAGCCATTCCAAAAAGATGCAAGCCCTCCAGTCTCAGCACAAAGTTTAGGACTCGAGGAATCATCTTCAAATAATAATGCCGCAGCTCGTGAAGTTCATAGTGGAAATGATTGTTCAAGCACCGCCTTTCAAAATGTGCAACCTTTTGGAACAGCACAGCTTTTAAAGGAAACTGGAGCGTCGAGCAATGAAACTGGTATGCAGAATGAAAATGACCGACGTGAAGAATTACCTAGTGGGTTAAATAGGATCCCTGTGCCGCTTGTCACTCGGAGTACACTTGAAGTTGTGATACCAGAGCCTGCAGTCCCCAAGCTTATAACAAAATCAAAAAACAAGCTTGCTCAGATCAGTGAGTTGTCTGGAGCCAATGTTACGTTGGTAGAAGATAGACCAGATGTAACCCAGAAGATAATTCAAATATCAGGCACACCAGAGCAAGCTGAGAGAGCCCAGAGCTTGTTGCAAGGCTTTATTTTGAGCTAAGGAACAGCGATGAGTATTCCAATCCCAACACTCTCCTTTGCTTCGCCTTTGTTGCCGCACAAGATTGAGGTGAAGCCCCGAGTTTCTTCTGCCTTTAACTTTCGTCCCCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATAGTGAAGGTAGTGGCCGGCGAGTGTGGCGACGAAGAAAATTGACGAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTCGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTGGAGAGCAACCGTGATGAATATGGAGGTTCCAAGAAAGCCATTCTTCACGTTCTTAGCAACCGAGTGAATGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAACAAGAATATACTTGA

Coding sequence (CDS)

ATGGAGAAGTCTAGATCTAAGAGAAACTACTACTATGACCACCAAGACTATGATTCGGAGTCGATGGGTAGAACCAGACCTCGTTACAACAACAATCACTACCCAAATAATAACTATCGTCACCGTGGGAATGCTGTTCGACCGTCTAAACCTCAAGACCAATCTCTTATGGTCACCACCACTTACAGGATACTCTGTCATGATGCTAAGGCTGGGGGAGTTATCGGCAAATCTGGCAGTATTATTAAGTCCATAAGGCAGCACACCGGCGCCTGGATCAACGTGCATGAGCTTGTTCCCGGTGATGAGGAGAGAATAATTGAGATATCGGACACTCGGCGGCGGGACCCGGAAGGCCGGATGCCGTCGTTCTCTCCGGCCCAAGAAGCACTTTTCTTGATTCATGAAAGGATTCTCGAGAGTGAAATGAGTCCTGGATTTAATGGAATGGGGTACGGTCCTGAAGATGAGGAGGATGATTACGGTGGCGTTAGAGGAGGAGCTGGCGGTGGCGTTGGTGGCCGTGTGGCGACAAGGCTTGTTGTGTCTAGAATGCACGTTGGTTGTTTGCTTGGGAAGGGAGGGAAGATAATCGAGCAAATGAGGATGGAAACCAAGACCCAGATAAGGATTCTACCTAGAGATCACAATTTGCCTCGTTGCATTTCAATGTCGGAGGAGATTGTTCAGATTGTTGGAGATGCAAATGCCGTAAAGAAAGCTATAGCTATTGTTTCATCACGCTTGAGAGAGAGTCAGCATCGTGACCGTAGTCATTTCCATGGGCGTCTACATTCACCGGAACGTATTTTCCCTCCTGATGATGATTATGTTCCACATAATGCACGGCGATTATCAATGGATGGACGGCCATTTAGACCACGCATGCCTGCTTCTAATACAAGAGGCAATGACTATTCCAACCGTCAATCTAATTTTTTGGTGGAGCCTGGGGCTGCTCCTGTAAATGACAATATGCCCTTTTATGGTGAGGACCTTGTATTTAGAATATTATGCCCAGTTGATAAGGTAGATAATGTTATTGGAGAGTCTAATGGAATCATAGAATTACTTCGGAACGATGTTGGTGTGGATATCAAGGTTTCTGACCCTGTGACTGGTTCAAACGAACAGATTCTTATCATTTCCTCAGATGAGGGTCCAGATGATGAGCTTTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCGCATTGTTGATCTTGTTCCTGATAAGGATAACATTGTAACTACTAGGTTACTTGTACCATCAAGTGATATTGTATGTTTGGAGGGAAGAGATGGATCATTGTTAGAGATGAAGAGATTAACTGGTGCAAATGTACATATTGTGCCAAGAGAAGAACTTCCCATGTTTGTATCAGGGGCGGATGAGCTTGTACAGATCATAGGGGACATAAAAGCAGCTCGAGATGCACTTGTTGAGTTAACATCAAGATTACGGAATTACCTTTATAAGGAGCCATTCCAAAAAGATGCAAGCCCTCCAGTCTCAGCACAAAGTTTAGGACTCGAGGAATCATCTTCAAATAATAATGCCGCAGCTCGTGAAGTTCATAGTGGAAATGATTGTTCAAGCACCGCCTTTCAAAATGTGCAACCTTTTGGAACAGCACAGCTTTTAAAGGAAACTGGAGCGTCGAGCAATGAAACTGGTATGCAGAATGAAAATGACCGACGTGAAGAATTACCTAGTGGGTTAAATAGGATCCCTGTGCCGCTTGTCACTCGGAGTACACTTGAAGTTGTGATACCAGAGCCTGCAGTCCCCAAGCTTATAACAAAATCAAAAAACAAGCTTGCTCAGATCAGTGAGTTGTCTGGAGCCAATGTTACGTTGGTAGAAGATAGACCAGATGTAACCCAGAAGATAATTCAAATATCAGGCACACCAGAGCAAGCTGAGAGAGCCCAGAGCTTGTTGCAAGGCTTTATTTTGAGCTAA

Protein sequence

MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKKAIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASNTRGNDYSNRQSNFLVEPGAAPVNDNMPFYGEDLVFRILCPVDKVDNVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARDALVELTSRLRNYLYKEPFQKDASPPVSAQSLGLEESSSNNNAAAREVHSGNDCSSTAFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS
Homology
[Close]
BLAST of Lsi05G001120 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 4.5e-219
Identity = 424/674 (62.91%), Postives = 510/674 (75.67%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHY------PNNNYRHRGNA----VRPSK 60
           ME+SRSKRNY+YD QDYD +SM R++PRYNNN++       NN YR  G       RPSK
Sbjct: 1   MERSRSKRNYHYD-QDYDGDSMPRSKPRYNNNYHFGGGGGGNNRYRGGGGGGGGNGRPSK 60

Query: 61  PQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEIS 120
              ++ M TTTYRILCHDAKAGGVIGKSG+IIKSIRQHTGAWINVHELVPGD ERIIEIS
Sbjct: 61  SHPET-MATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 120

Query: 121 DTRRRDPEGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGG 180
           D RRRDP+GRMPSFSPAQEALF +H+RILESE   G+ G    P +EE+DYGGVR G   
Sbjct: 121 DNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGG---PPPEEEEDYGGVRPG--- 180

Query: 181 GVGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQ 240
             GGRV TRLVVSRMHVGCLLGKGGKIIEQMR+ETKT IRILPR+ NLPRC+S+SEEIVQ
Sbjct: 181 --GGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQ 240

Query: 241 IVGDANAVKKAIAIVSSRLRESQHRDRSHFHGRLHSPERIF-PPDDDYVPHNARRLSMDG 300
           IVG+ NAVK A+AIVSSRLRESQHRDRS+F GR HSPER F    DDY+P   RR S D 
Sbjct: 241 IVGELNAVKNALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDDYMP-QLRRQSSD- 300

Query: 301 RPFRPRMPASNTRGNDYSNRQSNFLVEPGAAPVNDNMPFYGEDLVFRILCPVDKVDNVIG 360
                R P  N R N++S+RQSN+  E  A PV +N+  Y E+LVF+ILCP DK+  V+G
Sbjct: 301 -----RFPRGNFRNNNFSSRQSNYAEEAPAVPVGENV--YSEELVFQILCPADKIVRVVG 360

Query: 361 ESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDL 420
           ES GII+LL+N++GVD++VSDPV GS+EQI+ ISS+E PDD  FPAQEALLHIQT+I+DL
Sbjct: 361 ESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDL 420

Query: 421 VPDKDNIVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQ 480
           +PDKDN++TTRLLVPS D +CLEG+ GS+ E+ RLTG +V I+ REE+P   S  D ++Q
Sbjct: 421 IPDKDNLITTRLLVPSRDSICLEGKAGSVSEISRLTGTSVQILAREEIPRCASINDVVIQ 480

Query: 481 IIGDIKAARDALVELTSRLRNYLYKEPFQKDASPPVSAQSLG--------LEESSSNNNA 540
           I G+I+AAR+ALVELT  LR++++KE  QK+ +PP S  + G        +E +SSNN  
Sbjct: 481 ITGEIRAAREALVELTLLLRSHMFKELSQKE-TPPASTSTTGPLEGVAGVMEVASSNNTI 540

Query: 541 AAREVHSGNDCSSTAFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVP 600
            +RE   G   S+   Q V     + +L +            E++ REE+P   +R+ VP
Sbjct: 541 QSRE---GPTSSNLNLQQV-----STILPQFKEGFGSVAKAGESEHREEVPVTTSRMAVP 600

Query: 601 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 656
           LVTRSTLEVV+PE  VPKL+TKS+NKLAQISE SGA+VT+VEDRP+ TQ II+ISGTPEQ
Sbjct: 601 LVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQ 646

[Close]
BLAST of Lsi05G001120 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.4e-39
Identity = 195/824 (23.67%), Postives = 315/824 (38.23%), Query Frame = 0 

Query: 62  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 121
           +R+LC  +  G VIGKSG++IK ++Q TGA I V E   G  +R+I I    + D + R+
Sbjct: 49  FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITI--IAQADSKSRV 108

Query: 122 PSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEED-DYGGVRGG--------AGGGV 181
                               ++    NG   G + EE+ +    +G         A    
Sbjct: 109 --------------------KLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEAD 168

Query: 182 GGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIV 241
              V  RL+    H G ++GKGG+++  +R ET  +I I  R  NLP C    +E+V++ 
Sbjct: 169 SDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI--RIENLPICADTDDEMVEVE 228

Query: 242 GDANAVKKAIAIVSS--------------------------------------------- 301
           G+A AVKKA+  +S                                              
Sbjct: 229 GNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSVEV 288

Query: 302 -----RLRES-------------------------------------------------- 361
                RLR                                                    
Sbjct: 289 NPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRMHIEADRQDVLRRHVE 348

Query: 362 --------------------------------QHRDRSHFHGRLHSPERIFPPDDDYVPH 421
                                           QHR+R   H  LH P  + P D   +P 
Sbjct: 349 ADRQDALRRRIDVVPQETLYMPSDVLRGDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPF 408

Query: 422 NARRLSMDGRPFRPRMPASNTRGN--DY-SNRQSNFLVEPGA-------------APVND 481
            +      GRP    M     RG   DY ++R S     P +              P   
Sbjct: 409 ESFPRDAYGRPIE-TMTQETLRGQSADYLAHRYSTLDTHPHSFTTSASMANTATMKPPPS 468

Query: 482 NMPFYGEDLVFRILCPVDKVDNVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISS 541
            +    +D+VF+ILC  +    VIG    ++ +L ++ G  I V + +    E+++ +++
Sbjct: 469 EVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTA 528

Query: 542 DEGPDDELFPAQEALLHIQTRIVDLVPDK--DN----IVTTRLLVPSSDIVCLEGRDGSL 601
            E P+ +  PAQ+A++ I +R+ +L  +K  DN     +T RL+VP+S I C+ G+ G +
Sbjct: 529 SENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVI 588

Query: 602 L-EMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARDALVELTSRLRNYLYKEPF 656
           + EM++ TGA + I+  E+ P  +S  D++VQI G+    R+A+  +TSRLR+ ++    
Sbjct: 589 VSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSM 648

[Close]
BLAST of Lsi05G001120 vs. ExPASy Swiss-Prot
Match: P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.6e-38
Identity = 180/656 (27.44%), Postives = 292/656 (44.51%), Query Frame = 0 

Query: 31  NNHYPNNNYRHRGNAVRPSKPQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTG 90
           NN   N N + R   +   K     L+V   YRILC     GGVIGKSG +I +IR +T 
Sbjct: 13  NNSESNRNQKRR---ISHDKINRDELVV---YRILCPIDVVGGVIGKSGKVINAIRHNTK 72

Query: 91  AWINVHELVPGDEERIIEI--SDTRRRDPEGRMPSFSP----AQEALFLIHERILESEMS 150
           A I V + + G  +R+I I  S   +++  G   S +     AQ+AL  +++ I+ S+  
Sbjct: 73  AKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEE 132

Query: 151 PGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRLVVSRMHVGCLLGKGGKIIEQMRME 210
                       + DD                  RL+V       L+GK G+ I+++R  
Sbjct: 133 NNTK-----TNVDRDD--------------NKECRLLVPFSQSSSLIGKAGENIKRIRRR 192

Query: 211 TKTQIRILPRDHNLPR--CISMSEEIVQIVGDANAVKKAIAIVSSRLRESQHRDRSHFHG 270
           T+  ++++ +D + P   C    + +V I G+  +VK+A+  VS+ + +   R+      
Sbjct: 193 TRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENI---- 252

Query: 271 RLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASNTRG-------NDYSNRQSNFLV 330
            L S  +  P     VP +          F         +G       N  S        
Sbjct: 253 PLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYA 312

Query: 331 EPGAAPV---NDNMP----FYG----EDLVFRILCPVDKVDNVIGESNGIIELLRNDVGV 390
           E  A PV     ++P    F G    E+LVF++LCP+  +  VIG+    I+ +R   G 
Sbjct: 313 ETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGS 372

Query: 391 DIKVSDPVT--GSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLL 450
            I+V+D  T  G +E ++I+++ E PDD    A EA+L +Q  I D   D +N V  +LL
Sbjct: 373 CIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYIND--EDAEN-VKMQLL 432

Query: 451 VPSSDIVCLEGRDGSLL-EMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARDAL 510
           V S  I C+ G+ GS++ E+++ T AN+ I   ++        D+LV++ G++ + RDAL
Sbjct: 433 VSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDLVEVSGEVSSVRDAL 492

Query: 511 VELTSRLR-NYLYKEPFQKDASPPVSAQSLGLEESSSNNNAAAREVHSGNDCSSTAFQNV 570
           +++  RLR + L  +       PP    +      SSN         S +  S++ F   
Sbjct: 493 IQIVLRLREDVLGDKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFMS-SMASTSGFHGY 552

Query: 571 QPFGTA-QLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEPAVPK 630
             F     +L  TG                  P    R+P    + S LE++IP  A+ K
Sbjct: 553 GSFPAGDNVLGSTG------------------PYSYGRLP----SSSALEILIPAHAMSK 605

Query: 631 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 656
           ++ K    L  I  +SGA + +   +      I  +SGT EQ   A++L+Q F++S
Sbjct: 613 VMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTLEQMRCAENLVQAFVMS 605

[Close]
BLAST of Lsi05G001120 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-19
Identity = 94/360 (26.11%), Postives = 159/360 (44.17%), Query Frame = 0 

Query: 324 DNMPFYGEDLVFRILCPVDKVDNVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIIS 383
           +  P +  D VFR++ PV KV  +IG     I+ +  +    IKV D    + ++I++IS
Sbjct: 65  ERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLIS 124

Query: 384 SDEGPDDELFPAQEALLHIQTRIVDLVPDKDN---------IVTTRLLVPSSDIVCLEGR 443
             E P+  + PA +A+L +  R+  L PD D+           + RLLV S+  + L G+
Sbjct: 125 GKEEPEAYMSPAMDAVLRVFRRVSGL-PDNDDDDVQNAGSVFSSVRLLVASTQAINLIGK 184

Query: 444 DGSLLE-MKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARDALVELTSRLRNYLY 503
            GSL++ +   +GA+V I+  EE P + +  + +V + G+      AL  +   LR +L 
Sbjct: 185 QGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLV 244

Query: 504 KEP----FQKD---------ASPPVSAQSLGLEESSSN-----NNAAAREVHSGNDCSST 563
                  F+K             P++     L   SSN      +  AR      +  S 
Sbjct: 245 DHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLERDSR 304

Query: 564 AFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEP 623
               VQP G +   ++   S+  +              GL R+    VT+ +  + IP  
Sbjct: 305 VDSRVQPSGVSIYSQDPVLSARHS-------------PGLARVSSAFVTQVSQTMQIPFS 364

Query: 624 AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 656
               +I      +A I   SGA +T +++ P   Q  ++I GT  Q + A+ L+Q FI++
Sbjct: 365 YAEDIIGVEGANIAYIRRRSGATIT-IKESPHPDQITVEIKGTTSQVQTAEQLIQEFIIN 409

[Close]
BLAST of Lsi05G001120 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.1e-19
Identity = 86/347 (24.78%), Postives = 159/347 (45.82%), Query Frame = 0 

Query: 327 PFYGEDLVFRILCPVDKVDNVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDE 386
           P +  + VFR+L P  KV ++IG    +I+ +  +    IK+ D   G+ E+ +++S  E
Sbjct: 181 PGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKE 240

Query: 387 GPDDELFPAQEALLHIQTRIVDLVPDK------DNIVTTRLLVPSSDIVCLEGRDGSLLE 446
            P+  L P+ + LL +  RIVD +  +       + V+TRLLVP+S    L G+ G  ++
Sbjct: 241 EPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVK 300

Query: 447 -MKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARDALVELTSRLRNYLYKE---P 506
            ++  +   V ++  E+LP+F    D +V+++G+  +   AL  + S LR +L      P
Sbjct: 301 AIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIP 360

Query: 507 F----------QKDASPPVSAQSLGLEESSSNNNAAAREVHSGNDCSSTAFQNVQPFGTA 566
           F          Q D  PP   QS G  +  + +       H+         ++   +   
Sbjct: 361 FFENQMQKPTRQMDHMPP-PHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPP 420

Query: 567 QLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSKN 626
           ++ +         G+ +   R   +   ++  P  +  + T ++ IP      +I  S +
Sbjct: 421 EMRQPPMEKQPHQGI-SAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGS 480

Query: 627 KLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFI 654
            ++    LSGA VT+ E R    +  +++SGT  Q + A  L+Q F+
Sbjct: 481 NISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM 525

[Close]
BLAST of Lsi05G001120 vs. ExPASy TrEMBL
Match: A0A5D3CIV3 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001500 PE=4 SV=1)

HSP 1 Score: 1231.1 bits (3184), Expect = 0.0e+00
Identity = 631/660 (95.61%), Postives = 642/660 (97.27%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQD+DSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDFDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRL 180
           MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG GGG GGRVATRL
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKK 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVKK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASN 300
           AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRL MDGRPFRPRM ASN
Sbjct: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLPMDGRPFRPRMSASN 300

Query: 301 TRGNDYSNRQSNFLVEPGAAPVNDN-MPFYGEDLVFRILCPVDKVDNVIGESNGIIELLR 360
           +RGNDYSNRQSNF+VEPGAAPVNDN MPFYGEDLVFRILCP++K+D+VIGESNGIIELLR
Sbjct: 301 SRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKIDSVIGESNGIIELLR 360

Query: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT 420
           NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDK+NIVTT
Sbjct: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKENIVTT 420

Query: 421 RLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARD 480
           RLLVPSSDI CLEGRDGSLLEMKRLTGANVHIVPRE+LPMFVSGADELVQIIGDIKAARD
Sbjct: 421 RLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARD 480

Query: 481 ALVELTSRLRNYLYKEPFQKDASPPVSAQ----SLGLEESSSNNNAAAREVHSGNDCSST 540
           ALVELTSRLRN LYKEPFQKDASP VS Q    SLGLEESSSNNNAAAREVHSGND +ST
Sbjct: 481 ALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSAST 540

Query: 541 AFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEP 600
           AFQNVQPFGTAQLLKETG SSNETG QNENDRRE+LPSGLNRIPVPLVTRSTLEVVIPEP
Sbjct: 541 AFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEP 600

Query: 601 AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 656
           AVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS
Sbjct: 601 AVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 660

[Close]
BLAST of Lsi05G001120 vs. ExPASy TrEMBL
Match: A0A0A0L6Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238210 PE=4 SV=1)

HSP 1 Score: 1229.5 bits (3180), Expect = 0.0e+00
Identity = 630/660 (95.45%), Postives = 643/660 (97.42%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQD+DS+SMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDFDSDSMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRL 180
           MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG GGG GGRVATRL
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKK 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVKK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASN 300
           AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPP+DDYVPHNARRL MDGRPFRPRM ASN
Sbjct: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPEDDYVPHNARRLPMDGRPFRPRMSASN 300

Query: 301 TRGNDYSNRQSNFLVEPGAAPVNDN-MPFYGEDLVFRILCPVDKVDNVIGESNGIIELLR 360
           TRGNDYS+RQSNF+VEPGAAPVNDN MPFYGEDLVF+ILCP++KVD+VIGESNGIIELLR
Sbjct: 301 TRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVDSVIGESNGIIELLR 360

Query: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT 420
           NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDK+NIVTT
Sbjct: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKENIVTT 420

Query: 421 RLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARD 480
           RLLVPSSDI CLEGRDGSLLEMKRLTGANVHIVPRE+LPMFVSGADELVQIIGDIKAARD
Sbjct: 421 RLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARD 480

Query: 481 ALVELTSRLRNYLYKEPFQKDASPPVSAQ----SLGLEESSSNNNAAAREVHSGNDCSST 540
           ALVELTSRLRN LYKEPFQKDASP VS Q    SLGLEESSSNNNAAAREVHSGND +ST
Sbjct: 481 ALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSAST 540

Query: 541 AFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEP 600
           AFQNVQPFGTAQLLKETG SSNETG QNENDRRE+LPSGLNRIPVPLVTRSTLEVVIPEP
Sbjct: 541 AFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEP 600

Query: 601 AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 656
           AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS
Sbjct: 601 AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 660

[Close]
BLAST of Lsi05G001120 vs. ExPASy TrEMBL
Match: A0A5A7U3Y9 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001660 PE=4 SV=1)

HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 630/660 (95.45%), Postives = 641/660 (97.12%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQD+DSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDFDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRL 180
           MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG G G GGRVATRL
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGSGCGGRVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKK 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVKK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASN 300
           AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRL MDGRPFRPRM ASN
Sbjct: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLPMDGRPFRPRMSASN 300

Query: 301 TRGNDYSNRQSNFLVEPGAAPVNDN-MPFYGEDLVFRILCPVDKVDNVIGESNGIIELLR 360
           +RGNDYSNRQSNF+VEPGAAPVNDN MPFYGEDLVFRILCP++K+D+VIGESNGIIELLR
Sbjct: 301 SRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKIDSVIGESNGIIELLR 360

Query: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT 420
           NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDK+NIVTT
Sbjct: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKENIVTT 420

Query: 421 RLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARD 480
           RLLVPSSDI CLEGRDGSLLEMKRLTGANVHIVPRE+LPMFVSGADELVQIIGDIKAARD
Sbjct: 421 RLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARD 480

Query: 481 ALVELTSRLRNYLYKEPFQKDASPPVSAQ----SLGLEESSSNNNAAAREVHSGNDCSST 540
           ALVELTSRLRN LYKEPFQKDASP VS Q    SLGLEESSSNNNAAAREVHSGND +ST
Sbjct: 481 ALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSAST 540

Query: 541 AFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEP 600
           AFQNVQPFGTAQLLKETG SSNETG QNENDRRE+LPSGLNRIPVPLVTRSTLEVVIPEP
Sbjct: 541 AFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEP 600

Query: 601 AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 656
           AVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS
Sbjct: 601 AVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 660

[Close]
BLAST of Lsi05G001120 vs. ExPASy TrEMBL
Match: A0A1S3C2V2 (KH domain-containing protein At4g18375 OS=Cucumis melo OX=3656 GN=LOC103496048 PE=4 SV=1)

HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 630/660 (95.45%), Postives = 641/660 (97.12%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQD+DSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDFDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRL 180
           MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG G G GGRVATRL
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGSGCGGRVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKK 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVKK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASN 300
           AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRL MDGRPFRPRM ASN
Sbjct: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLPMDGRPFRPRMSASN 300

Query: 301 TRGNDYSNRQSNFLVEPGAAPVNDN-MPFYGEDLVFRILCPVDKVDNVIGESNGIIELLR 360
           +RGNDYSNRQSNF+VEPGAAPVNDN MPFYGEDLVFRILCP++K+D+VIGESNGIIELLR
Sbjct: 301 SRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKIDSVIGESNGIIELLR 360

Query: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT 420
           NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDK+NIVTT
Sbjct: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKENIVTT 420

Query: 421 RLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARD 480
           RLLVPSSDI CLEGRDGSLLEMKRLTGANVHIVPRE+LPMFVSGADELVQIIGDIKAARD
Sbjct: 421 RLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARD 480

Query: 481 ALVELTSRLRNYLYKEPFQKDASPPVSAQ----SLGLEESSSNNNAAAREVHSGNDCSST 540
           ALVELTSRLRN LYKEPFQKDASP VS Q    SLGLEESSSNNNAAAREVHSGND +ST
Sbjct: 481 ALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSAST 540

Query: 541 AFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEP 600
           AFQNVQPFGTAQLLKETG SSNETG QNENDRRE+LPSGLNRIPVPLVTRSTLEVVIPEP
Sbjct: 541 AFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEP 600

Query: 601 AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 656
           AVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS
Sbjct: 601 AVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 660

[Close]
BLAST of Lsi05G001120 vs. ExPASy TrEMBL
Match: A0A6J1E5R0 (RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita moschata OX=3662 GN=LOC111430831 PE=4 SV=1)

HSP 1 Score: 1184.5 bits (3063), Expect = 0.0e+00
Identity = 617/660 (93.48%), Postives = 633/660 (95.91%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQDYDSE+MGRTRPRY NNHY NNNYRHRG+AVRP+KPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRY-NNHYANNNYRHRGSAVRPTKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRL 180
           MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGG   RVATRL
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGG-SSRVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKK 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVG+ANAVKK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGEANAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASN 300
           A+AIVSSRLRESQHR+RSHFHGRLHSPERI PPDDDYVP  ARRLSMDGRPFRPR+  SN
Sbjct: 241 AVAIVSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIARRLSMDGRPFRPRI--SN 300

Query: 301 TRGNDYSNRQSNFLVEPGAAPVNDN-MPFYGEDLVFRILCPVDKVDNVIGESNGIIELLR 360
           TRGNDYSNRQSNFLVEPGAA VNDN MPFYGEDLVFRILCP+DKVD+VIG+S+GIIELLR
Sbjct: 301 TRGNDYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELLR 360

Query: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT 420
           ++VGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT
Sbjct: 361 DEVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT 420

Query: 421 RLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARD 480
           RLLVPSSDI CLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARD
Sbjct: 421 RLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARD 480

Query: 481 ALVELTSRLRNYLYKEPFQKDASPPVSAQ----SLGLEESSSNNNAAAREVHSGNDCSST 540
           A+VELTSRLRNYLYKEPFQKDASPPVS      SLGLEESSSNNNAAAREVHSGND S T
Sbjct: 481 AVVELTSRLRNYLYKEPFQKDASPPVSLPSTMGSLGLEESSSNNNAAAREVHSGNDSSIT 540

Query: 541 AFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEP 600
           A+QNVQPFGT QLLKE G SSNETG QNENDRRE+LPSGLNRIPVPLVTRSTLEVVIPE 
Sbjct: 541 AYQNVQPFGTPQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEA 600

Query: 601 AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 656
           AVPKLITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFILS
Sbjct: 601 AVPKLITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFILS 656

[Close]
BLAST of Lsi05G001120 vs. NCBI nr
Match: XP_038891418.1 (RNA-binding KH domain-containing protein RCF3 [Benincasa hispida])

HSP 1 Score: 1236.5 bits (3198), Expect = 0.0e+00
Identity = 635/657 (96.65%), Postives = 643/657 (97.87%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRL 180
           MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGV GRVATRL
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGV-GRVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKK 240
           VVS+MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVKK
Sbjct: 181 VVSKMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASN 300
           AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRL MDGRPFRPRM ASN
Sbjct: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLPMDGRPFRPRMSASN 300

Query: 301 TRGNDYSNRQSNFLVEPGAAPVNDN-MPFYGEDLVFRILCPVDKVDNVIGESNGIIELLR 360
           TRGNDYSNRQSNFLVEPGA PVNDN MPFYGEDLVFRILCP+DKVD+VIGESNGIIELLR
Sbjct: 301 TRGNDYSNRQSNFLVEPGAVPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESNGIIELLR 360

Query: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT 420
           NDVGVDIKVSDPVTGSNE+ILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT
Sbjct: 361 NDVGVDIKVSDPVTGSNERILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT 420

Query: 421 RLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARD 480
           RLLVPSSDI CLEGRDGSLLEMKRLTGANVHIVPRE+LPMFVSGADELVQIIGDIKAARD
Sbjct: 421 RLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARD 480

Query: 481 ALVELTSRLRNYLYKEPFQKDASPPVSAQ-SLGLEESSSNNNAAAREVHSGNDCSSTAFQ 540
           ALVELTSRLRNYLYKEPFQKDASPPVS Q SLGLEESSSNNNA AREVHSGND SSTA+Q
Sbjct: 481 ALVELTSRLRNYLYKEPFQKDASPPVSVQASLGLEESSSNNNAVAREVHSGNDSSSTAYQ 540

Query: 541 NVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEPAVP 600
           NVQPFGTA LLKETG SSNETG QNENDRRE+LPSGLNRIPVPLVTRSTLEVVIPEPAVP
Sbjct: 541 NVQPFGTAHLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVP 600

Query: 601 KLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 656
           KLITKSKNKLAQISELSGANVTLVEDRPDV+QKIIQISGTPEQAERAQSLLQGFILS
Sbjct: 601 KLITKSKNKLAQISELSGANVTLVEDRPDVSQKIIQISGTPEQAERAQSLLQGFILS 656

[Close]
BLAST of Lsi05G001120 vs. NCBI nr
Match: TYK11290.1 (KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1231.1 bits (3184), Expect = 0.0e+00
Identity = 631/660 (95.61%), Postives = 642/660 (97.27%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQD+DSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDFDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRL 180
           MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG GGG GGRVATRL
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKK 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVKK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASN 300
           AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRL MDGRPFRPRM ASN
Sbjct: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLPMDGRPFRPRMSASN 300

Query: 301 TRGNDYSNRQSNFLVEPGAAPVNDN-MPFYGEDLVFRILCPVDKVDNVIGESNGIIELLR 360
           +RGNDYSNRQSNF+VEPGAAPVNDN MPFYGEDLVFRILCP++K+D+VIGESNGIIELLR
Sbjct: 301 SRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKIDSVIGESNGIIELLR 360

Query: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT 420
           NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDK+NIVTT
Sbjct: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKENIVTT 420

Query: 421 RLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARD 480
           RLLVPSSDI CLEGRDGSLLEMKRLTGANVHIVPRE+LPMFVSGADELVQIIGDIKAARD
Sbjct: 421 RLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARD 480

Query: 481 ALVELTSRLRNYLYKEPFQKDASPPVSAQ----SLGLEESSSNNNAAAREVHSGNDCSST 540
           ALVELTSRLRN LYKEPFQKDASP VS Q    SLGLEESSSNNNAAAREVHSGND +ST
Sbjct: 481 ALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSAST 540

Query: 541 AFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEP 600
           AFQNVQPFGTAQLLKETG SSNETG QNENDRRE+LPSGLNRIPVPLVTRSTLEVVIPEP
Sbjct: 541 AFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEP 600

Query: 601 AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 656
           AVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS
Sbjct: 601 AVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 660

[Close]
BLAST of Lsi05G001120 vs. NCBI nr
Match: XP_011651315.1 (RNA-binding KH domain-containing protein RCF3 isoform X1 [Cucumis sativus] >KGN57655.1 hypothetical protein Csa_009601 [Cucumis sativus])

HSP 1 Score: 1229.5 bits (3180), Expect = 0.0e+00
Identity = 630/660 (95.45%), Postives = 643/660 (97.42%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQD+DS+SMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDFDSDSMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRL 180
           MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG GGG GGRVATRL
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKK 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVKK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASN 300
           AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPP+DDYVPHNARRL MDGRPFRPRM ASN
Sbjct: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPEDDYVPHNARRLPMDGRPFRPRMSASN 300

Query: 301 TRGNDYSNRQSNFLVEPGAAPVNDN-MPFYGEDLVFRILCPVDKVDNVIGESNGIIELLR 360
           TRGNDYS+RQSNF+VEPGAAPVNDN MPFYGEDLVF+ILCP++KVD+VIGESNGIIELLR
Sbjct: 301 TRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVDSVIGESNGIIELLR 360

Query: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT 420
           NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDK+NIVTT
Sbjct: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKENIVTT 420

Query: 421 RLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARD 480
           RLLVPSSDI CLEGRDGSLLEMKRLTGANVHIVPRE+LPMFVSGADELVQIIGDIKAARD
Sbjct: 421 RLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARD 480

Query: 481 ALVELTSRLRNYLYKEPFQKDASPPVSAQ----SLGLEESSSNNNAAAREVHSGNDCSST 540
           ALVELTSRLRN LYKEPFQKDASP VS Q    SLGLEESSSNNNAAAREVHSGND +ST
Sbjct: 481 ALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSAST 540

Query: 541 AFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEP 600
           AFQNVQPFGTAQLLKETG SSNETG QNENDRRE+LPSGLNRIPVPLVTRSTLEVVIPEP
Sbjct: 541 AFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEP 600

Query: 601 AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 656
           AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS
Sbjct: 601 AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 660

[Close]
BLAST of Lsi05G001120 vs. NCBI nr
Match: XP_008455983.1 (PREDICTED: KH domain-containing protein At4g18375 [Cucumis melo])

HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 630/660 (95.45%), Postives = 641/660 (97.12%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQD+DSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDFDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRL 180
           MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG G G GGRVATRL
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGSGCGGRVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKK 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVKK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASN 300
           AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRL MDGRPFRPRM ASN
Sbjct: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLPMDGRPFRPRMSASN 300

Query: 301 TRGNDYSNRQSNFLVEPGAAPVNDN-MPFYGEDLVFRILCPVDKVDNVIGESNGIIELLR 360
           +RGNDYSNRQSNF+VEPGAAPVNDN MPFYGEDLVFRILCP++K+D+VIGESNGIIELLR
Sbjct: 301 SRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKIDSVIGESNGIIELLR 360

Query: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT 420
           NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDK+NIVTT
Sbjct: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKENIVTT 420

Query: 421 RLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARD 480
           RLLVPSSDI CLEGRDGSLLEMKRLTGANVHIVPRE+LPMFVSGADELVQIIGDIKAARD
Sbjct: 421 RLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARD 480

Query: 481 ALVELTSRLRNYLYKEPFQKDASPPVSAQ----SLGLEESSSNNNAAAREVHSGNDCSST 540
           ALVELTSRLRN LYKEPFQKDASP VS Q    SLGLEESSSNNNAAAREVHSGND +ST
Sbjct: 481 ALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSAST 540

Query: 541 AFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEP 600
           AFQNVQPFGTAQLLKETG SSNETG QNENDRRE+LPSGLNRIPVPLVTRSTLEVVIPEP
Sbjct: 541 AFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEP 600

Query: 601 AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 656
           AVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS
Sbjct: 601 AVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 660

[Close]
BLAST of Lsi05G001120 vs. NCBI nr
Match: KAA0050522.1 (KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 630/660 (95.45%), Postives = 641/660 (97.12%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQD+DSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDFDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRL 180
           MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG G G GGRVATRL
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGSGCGGRVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKK 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVKK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASN 300
           AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRL MDGRPFRPRM ASN
Sbjct: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLPMDGRPFRPRMSASN 300

Query: 301 TRGNDYSNRQSNFLVEPGAAPVNDN-MPFYGEDLVFRILCPVDKVDNVIGESNGIIELLR 360
           +RGNDYSNRQSNF+VEPGAAPVNDN MPFYGEDLVFRILCP++K+D+VIGESNGIIELLR
Sbjct: 301 SRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKIDSVIGESNGIIELLR 360

Query: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTT 420
           NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDK+NIVTT
Sbjct: 361 NDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKENIVTT 420

Query: 421 RLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARD 480
           RLLVPSSDI CLEGRDGSLLEMKRLTGANVHIVPRE+LPMFVSGADELVQIIGDIKAARD
Sbjct: 421 RLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARD 480

Query: 481 ALVELTSRLRNYLYKEPFQKDASPPVSAQ----SLGLEESSSNNNAAAREVHSGNDCSST 540
           ALVELTSRLRN LYKEPFQKDASP VS Q    SLGLEESSSNNNAAAREVHSGND +ST
Sbjct: 481 ALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSAST 540

Query: 541 AFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVPLVTRSTLEVVIPEP 600
           AFQNVQPFGTAQLLKETG SSNETG QNENDRRE+LPSGLNRIPVPLVTRSTLEVVIPEP
Sbjct: 541 AFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEP 600

Query: 601 AVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 656
           AVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS
Sbjct: 601 AVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS 660

[Close]
BLAST of Lsi05G001120 vs. TAIR 10
Match: AT5G53060.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 762.3 bits (1967), Expect = 3.2e-220
Identity = 424/674 (62.91%), Postives = 510/674 (75.67%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHY------PNNNYRHRGNA----VRPSK 60
           ME+SRSKRNY+YD QDYD +SM R++PRYNNN++       NN YR  G       RPSK
Sbjct: 1   MERSRSKRNYHYD-QDYDGDSMPRSKPRYNNNYHFGGGGGGNNRYRGGGGGGGGNGRPSK 60

Query: 61  PQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEIS 120
              ++ M TTTYRILCHDAKAGGVIGKSG+IIKSIRQHTGAWINVHELVPGD ERIIEIS
Sbjct: 61  SHPET-MATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 120

Query: 121 DTRRRDPEGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGG 180
           D RRRDP+GRMPSFSPAQEALF +H+RILESE   G+ G    P +EE+DYGGVR G   
Sbjct: 121 DNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGG---PPPEEEEDYGGVRPG--- 180

Query: 181 GVGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQ 240
             GGRV TRLVVSRMHVGCLLGKGGKIIEQMR+ETKT IRILPR+ NLPRC+S+SEEIVQ
Sbjct: 181 --GGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQ 240

Query: 241 IVGDANAVKKAIAIVSSRLRESQHRDRSHFHGRLHSPERIF-PPDDDYVPHNARRLSMDG 300
           IVG+ NAVK A+AIVSSRLRESQHRDRS+F GR HSPER F    DDY+P   RR S D 
Sbjct: 241 IVGELNAVKNALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDDYMP-QLRRQSSD- 300

Query: 301 RPFRPRMPASNTRGNDYSNRQSNFLVEPGAAPVNDNMPFYGEDLVFRILCPVDKVDNVIG 360
                R P  N R N++S+RQSN+  E  A PV +N+  Y E+LVF+ILCP DK+  V+G
Sbjct: 301 -----RFPRGNFRNNNFSSRQSNYAEEAPAVPVGENV--YSEELVFQILCPADKIVRVVG 360

Query: 361 ESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDL 420
           ES GII+LL+N++GVD++VSDPV GS+EQI+ ISS+E PDD  FPAQEALLHIQT+I+DL
Sbjct: 361 ESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDL 420

Query: 421 VPDKDNIVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQ 480
           +PDKDN++TTRLLVPS D +CLEG+ GS+ E+ RLTG +V I+ REE+P   S  D ++Q
Sbjct: 421 IPDKDNLITTRLLVPSRDSICLEGKAGSVSEISRLTGTSVQILAREEIPRCASINDVVIQ 480

Query: 481 IIGDIKAARDALVELTSRLRNYLYKEPFQKDASPPVSAQSLG--------LEESSSNNNA 540
           I G+I+AAR+ALVELT  LR++++KE  QK+ +PP S  + G        +E +SSNN  
Sbjct: 481 ITGEIRAAREALVELTLLLRSHMFKELSQKE-TPPASTSTTGPLEGVAGVMEVASSNNTI 540

Query: 541 AAREVHSGNDCSSTAFQNVQPFGTAQLLKETGASSNETGMQNENDRREELPSGLNRIPVP 600
            +RE   G   S+   Q V     + +L +            E++ REE+P   +R+ VP
Sbjct: 541 QSRE---GPTSSNLNLQQV-----STILPQFKEGFGSVAKAGESEHREEVPVTTSRMAVP 600

Query: 601 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 656
           LVTRSTLEVV+PE  VPKL+TKS+NKLAQISE SGA+VT+VEDRP+ TQ II+ISGTPEQ
Sbjct: 601 LVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQ 646

[Close]
BLAST of Lsi05G001120 vs. TAIR 10
Match: AT5G53060.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-67
Identity = 141/201 (70.15%), Postives = 157/201 (78.11%), Query Frame = 0 

Query: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHY------PNNNYRHRGNA----VRPSK 60
           ME+SRSKRNY+YD QDYD +SM R++PRYNNN++       NN YR  G       RPSK
Sbjct: 1   MERSRSKRNYHYD-QDYDGDSMPRSKPRYNNNYHFGGGGGGNNRYRGGGGGGGGNGRPSK 60

Query: 61  PQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEIS 120
              ++ M TTTYRILCHDAKAGGVIGKSG+IIKSIRQHTGAWINVHELVPGD ERIIEIS
Sbjct: 61  SHPET-MATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 120

Query: 121 DTRRRDPEGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGG 180
           D RRRDP+GRMPSFSPAQEALF +H+RILESE   G+ G    P +EE+DYGGVR G   
Sbjct: 121 DNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGG---PPPEEEEDYGGVRPG--- 180

Query: 181 GVGGRVATRLVVSRMHVGCLL 192
             GGRV TRLVVSRMHVGCLL
Sbjct: 181 --GGRVVTRLVVSRMHVGCLL 191

[Close]
BLAST of Lsi05G001120 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 221.1 bits (562), Expect = 2.6e-57
Identity = 160/496 (32.26%), Postives = 252/496 (50.81%), Query Frame = 0 

Query: 24  RTRPRYNNNH----YPNNNYRHRGNAVRPSKPQDQSLMV----TTTYRILCHDAKAGGVI 83
           R  P + ++H     P ++Y   G + R  +  D+  +V     T +R LC   K G VI
Sbjct: 6   RMSPDHRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVI 65

Query: 84  GKSGSIIKSIRQHTGAWINVHELVPGDEERIIEI---SDTRRRDPEGRMPSFSPAQEALF 143
           G+ G I+K +R  T + I + E +PG +ER+I I   SD      +G     SPAQ+ALF
Sbjct: 66  GRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGE-KVLSPAQDALF 125

Query: 144 LIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRLVVSRMHVGCLLG 203
            IH+R++  +               ED   G +         +V  +L+V    +GC+LG
Sbjct: 126 RIHDRVVADDAR------------SEDSPEGEK---------QVTAKLLVPSDQIGCILG 185

Query: 204 KGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKKAIAIVSSRLRES 263
           +GG+I++ +R ET  QIRI+ +D N+P C   S+E++QI G+   VKKA+  ++SRL E+
Sbjct: 186 RGGQIVQNIRSETGAQIRIV-KDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHEN 245

Query: 264 QHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASNTRGNDYSNRQSN 323
             R ++     L S    +P           RL        P M +      D+S     
Sbjct: 246 PSRSQN-----LLSSSGGYPAGSLMSHAGGPRLV----GLAPLMGSYGRDAGDWS----- 305

Query: 324 FLVEPGAAPVNDNMPFYGEDLVFRILCPVDKVDNVIGESNGIIELLRNDVGVDIKVSDPV 383
               P   P  ++ P    +   R++ PV+ + +VIG+   +I  LR +    IKV    
Sbjct: 306 ---RPLYQPPRNDPP--ATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSR 365

Query: 384 TGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIV--TTRLLVPSSDIVC 443
           T  N+ ++ IS+ E  +D   P  EA++ +Q +  D V     +V  TTRLLVPSS I C
Sbjct: 366 TEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRLLVPSSRIGC 425

Query: 444 LEGRDGSLL-EMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARDALVELTSRLR 503
           + G+ G+++ EM+R+T AN+ I+ +E LP   S  DE+VQI G++  A++AL+++TSRLR
Sbjct: 426 ILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLR 459

Query: 504 NYLYKEPFQKDASPPV 506
             ++       A  PV
Sbjct: 486 ANVFDREGAVSALMPV 459

[Close]
BLAST of Lsi05G001120 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 221.1 bits (562), Expect = 2.6e-57
Identity = 160/496 (32.26%), Postives = 252/496 (50.81%), Query Frame = 0 

Query: 24  RTRPRYNNNH----YPNNNYRHRGNAVRPSKPQDQSLMV----TTTYRILCHDAKAGGVI 83
           R  P + ++H     P ++Y   G + R  +  D+  +V     T +R LC   K G VI
Sbjct: 6   RMSPDHRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVI 65

Query: 84  GKSGSIIKSIRQHTGAWINVHELVPGDEERIIEI---SDTRRRDPEGRMPSFSPAQEALF 143
           G+ G I+K +R  T + I + E +PG +ER+I I   SD      +G     SPAQ+ALF
Sbjct: 66  GRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGE-KVLSPAQDALF 125

Query: 144 LIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVGGRVATRLVVSRMHVGCLLG 203
            IH+R++  +               ED   G +         +V  +L+V    +GC+LG
Sbjct: 126 RIHDRVVADDAR------------SEDSPEGEK---------QVTAKLLVPSDQIGCILG 185

Query: 204 KGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKKAIAIVSSRLRES 263
           +GG+I++ +R ET  QIRI+ +D N+P C   S+E++QI G+   VKKA+  ++SRL E+
Sbjct: 186 RGGQIVQNIRSETGAQIRIV-KDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHEN 245

Query: 264 QHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLSMDGRPFRPRMPASNTRGNDYSNRQSN 323
             R ++     L S    +P           RL        P M +      D+S     
Sbjct: 246 PSRSQN-----LLSSSGGYPAGSLMSHAGGPRLV----GLAPLMGSYGRDAGDWS----- 305

Query: 324 FLVEPGAAPVNDNMPFYGEDLVFRILCPVDKVDNVIGESNGIIELLRNDVGVDIKVSDPV 383
               P   P  ++ P    +   R++ PV+ + +VIG+   +I  LR +    IKV    
Sbjct: 306 ---RPLYQPPRNDPP--ATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSR 365

Query: 384 TGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIV--TTRLLVPSSDIVC 443
           T  N+ ++ IS+ E  +D   P  EA++ +Q +  D V     +V  TTRLLVPSS I C
Sbjct: 366 TEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRLLVPSSRIGC 425

Query: 444 LEGRDGSLL-EMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARDALVELTSRLR 503
           + G+ G+++ EM+R+T AN+ I+ +E LP   S  DE+VQI G++  A++AL+++TSRLR
Sbjct: 426 ILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLR 459

Query: 504 NYLYKEPFQKDASPPV 506
             ++       A  PV
Sbjct: 486 ANVFDREGAVSALMPV 459

[Close]
BLAST of Lsi05G001120 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 193.7 bits (491), Expect = 4.5e-49
Identity = 179/645 (27.75%), Postives = 291/645 (45.12%), Query Frame = 0 

Query: 62  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVP-GDEERIIEI--SDTRRRDPE 121
           +R+LC   + G +IGK GS+I+ ++  TG+ I V + +P   EER++ I     +++D  
Sbjct: 21  FRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKDES 80

Query: 122 GRMPSFSPAQEALFLIHERILESEMSPGFNGMG-YGPEDEE------------------- 181
               S +P  E          E +   G    G  G +DEE                   
Sbjct: 81  NVCDSENPGSE----------EPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFG 140

Query: 182 DDYGGVRGGAGGGVGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNL 241
           DD   V G            R++V    V  L+ KGGK+I+++R ++   +RI   D  +
Sbjct: 141 DDAATVDGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTD-QI 200

Query: 242 PRCISMSEEIVQIVGDANAVKKAIAIVSSRLRES---QHRDRSHFHGRLHSPE---RIFP 301
           P C    + ++Q+ G  ++VKKA+ +V++ L+ES      D   F    + PE     + 
Sbjct: 201 PPCAFPGDVVIQMNGKFSSVKKALLLVTNCLQESGAPPTWDECPFPQPGYPPEYHSMEYH 260

Query: 302 PDDDYVPHNARRLSMDGRPFRPRMPASNTRGNDYSNRQSNFLVEPGAAPVNDNMPFYGED 361
           P  D+ P N   +  D  PF                                N P   E+
Sbjct: 261 PQWDHPPPNP--MPEDVGPF--------------------------------NRPVVEEE 320

Query: 362 LVFRILCPVDKVDNVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDEL 421
           + FR+LCP DKV ++IG+   ++  L+N+ G  IKVSDP   S E+I++IS+ E  +   
Sbjct: 321 VAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRH 380

Query: 422 FPAQEALLHIQTRIVDLVPDKDNIVTTRLLVPSSDIVCLEGRDGSLL-EMKRLTGANVHI 481
             AQ+ ++ +  RIV++  +    V  RLLV S  I  L G+ G L+ EM+R TGA++ +
Sbjct: 381 SLAQDGVMRVHNRIVEIGFEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRRATGASIRV 440

Query: 482 VPREELPMFVSGADELVQIIGDIKAARDALVELTSRLRNYLY--KEPFQKDASPPVSAQS 541
             +++   + S  DE+VQ+IG++K  +DAL ++  RLR  ++  + PFQ    PP     
Sbjct: 441 FAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMGGPPPPFMG 500

Query: 542 LGLEE----SSSNNNAAAREVHS------GNDCSSTAFQNV------QPFGTAQLLKETG 601
              E           A+    HS         C    F         +P        + G
Sbjct: 501 PYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSWTPQPG 560

Query: 602 ASSNETGM----QNENDRREELPSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLA 655
              +  GM     N        P G      P++T + +E+VIP+  +  +  ++ + L 
Sbjct: 561 IDGHPGGMVPPDVNHGFALRNEPIGSEN---PVMTSANVEIVIPQAYLGHVYGENCSNLN 617

The following BLAST results are available for this feature:
BLAST of Lsi05G001120 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8W4B14.5e-21962.91RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN... [more]
F4KDN02.4e-3923.67KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S... [more]
P582231.6e-3827.44KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18... [more]
Q9SZH41.3e-1926.11RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ... [more]
Q9SR132.1e-1924.78Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV... [more]
BLAST of Lsi05G001120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CIV30.0e+0095.61KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A0A0L6Q20.0e+0095.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238210 PE=4 SV=1[more]
A0A5A7U3Y90.0e+0095.45KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A1S3C2V20.0e+0095.45KH domain-containing protein At4g18375 OS=Cucumis melo OX=3656 GN=LOC103496048 P... [more]
A0A6J1E5R00.0e+0093.48RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita moschata OX=3662... [more]
BLAST of Lsi05G001120 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038891418.10.0e+0096.65RNA-binding KH domain-containing protein RCF3 [Benincasa hispida][more]
TYK11290.10.0e+0095.61KH domain-containing protein [Cucumis melo var. makuwa][more]
XP_011651315.10.0e+0095.45RNA-binding KH domain-containing protein RCF3 isoform X1 [Cucumis sativus] >KGN5... [more]
XP_008455983.10.0e+0095.45PREDICTED: KH domain-containing protein At4g18375 [Cucumis melo][more]
KAA0050522.10.0e+0095.45KH domain-containing protein [Cucumis melo var. makuwa][more]
BLAST of Lsi05G001120 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G53060.13.2e-22062.91RNA-binding KH domain-containing protein [more]
AT5G53060.22.2e-6770.15RNA-binding KH domain-containing protein [more]
AT5G15270.22.6e-5732.26RNA-binding KH domain-containing protein [more]
AT5G15270.12.6e-5732.26RNA-binding KH domain-containing protein [more]
AT1G51580.14.5e-4927.75RNA-binding KH domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 331..404
e-value: 0.45
score: 18.5
coord: 174..250
e-value: 6.3E-7
score: 39.0
coord: 58..139
e-value: 5.6E-7
score: 39.2
coord: 415..489
e-value: 1.2
score: 14.9
coord: 584..654
e-value: 0.0028
score: 26.9
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 58..141
e-value: 9.5E-16
score: 59.3
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 584..654
e-value: 4.0E-11
score: 44.4
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 172..254
e-value: 7.1E-16
score: 59.7
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 410..495
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 52..112
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 326..385
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 173..256
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 577..653
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 178..245
e-value: 1.9E-11
score: 43.6
coord: 587..650
e-value: 5.8E-8
score: 32.4
coord: 61..110
e-value: 5.9E-10
score: 38.8
NoneNo IPR availableGENE3D3.30.310.210coord: 331..493
e-value: 8.3E-21
score: 76.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..537
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 554..575
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 499..537
NoneNo IPR availablePANTHERPTHR10288:SF134RNA-BINDING KH DOMAIN-CONTAINING PROTEIN RCF3coord: 3..558
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 3..558
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 332..399
score: 10.147859
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 59..131
score: 12.286105
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 175..245
score: 14.340499
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 585..649
score: 12.705369
NoneNo IPR availableCDDcd00105KH-Icoord: 587..650
e-value: 1.90089E-9
score: 52.1771
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 61..135
e-value: 5.62692E-19
score: 79.0575
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 179..246
e-value: 1.25745E-15
score: 69.8127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G001120.1Lsi05G001120.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010468 regulation of gene expression
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0003729 mRNA binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding