Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCATCTTCCTCTATTTCTTCAAACCGAGAGACCATTGAAAACTTGTAGAGTCGAAAGATTGAAGGCTCGTTGAAGAATGGAAGCTACAAATGTCTCAGAAAGTAAGGGTACGATGATCTCTCAGAAAGGGCAATTTCGGGGAATCCGAATAGAGAATCCCTTCACTTTGAAGGTGGGTCAAATATTTACAGGCTTCGGCGTCGGCTGTGGCGTCGGTATCGGCGTTGGCCGCCCCATAAACATGGGTAAATTTTTCTTTCCTCCATTGTCGACCTTTTTTGTCTATCAATTTCTTTCATTAGCTTTCTCTTTCGCACTAACGAATCAAGTATAACCTGCCGAGAAGAGTTGTTTTCTGCTTTCATTTCATTTCATTTAGATTTTTCCTGAAATGGGTTCTGTTCTGCTCATCTTGGTGACTATGGATAAGGGTGAAATTTGAAAACGGATTTCTGTTGGAACATTTCTCTTTTCTCGAATGGGAAGATGAACAAGAGTACGTATTTTGAACTGGCAAATTGTTCAAAATCACATTCAAACACGCCTTTATCATTCACAATCAATTTGATATTTAATTTTACACTTCGAAACGCCATGTTTATACCGTTAAATTTGATTTTAAAGGATTTAAAAGTATGTTTTAGAGTGATTAAGGGAAAAATCACACTTCTAAACATGCCATTAGGGATATCATTATATGAAGGTTGTTTTTAAACTTAATTTTAAGTCAGGAGTGAGAGCAGTGGGATATGAACTCTGCCCAACTTTGTAGAATTTGGCCCTCGCTAATTAGTTCTAAATATACACATGTAGTTAGTTCGGTGATTCGAGTTTAATTTGAGATCTTATTTTCATCACATTTAACCTTAAAATTCTTTTTAGAAAATGTTGGAATTAATACCATTTGAAGCTGAGTTTTTCTTTTAAAAGAGATGTGGTTAAATCCAAACTCGCTAGTAGCTACCTAGAACATTAAATCATATGAGTATCTCATAGTGTGTAAGGTTAGCTGTTATCCCATAAAGTTAGTGGTTAGCTGTGAGTGGAACTAAGTTTAGGTAACCAATTGATGCTTGTATTTAAATTCAAACTCAGTGGTAACTAGTAATTCTAATTGACATTGTTTTGGTTGAATTAGGCATATTGGTACTTGTGTTTTGGTCTTTGGTCAGATTTAGGTGTTTTTTGTTGTTGGGTTTAGGCTTCCCATATATGGGTTTTTGTGTTTTTTTGGTTGGAGTCTGAGTAGTTTAGCTTAAGGCCCGTTCAATGATGTTTTTTTATTTTTATTTTTATTTTTTTGTATTTAACATTATAATTATCTACAACCTTTTCCTTTGTTTTCCAATCTAAACAATTTTCAGAAATAGAAAACTAAAAATAGCTATCAAATGGCCTTATTGATTAGTTTTTGAACAATTTTCACTTTCCCTCTTTGTGAGCTTTGAGTCTCTTGATTAAAAATTCTCAATTTAACATGACAGGGAATGTATTTCCAGGTAATTATGATACTCTTAGTGACGCTTTTAAATAGGTCTGCATGATATGTATAATATTTTTCAACCTCTTCCTTTCTTATCATGTTGAATATGTGCAAATTGCGGATATATGCTTGGCCCTTGGTTGATGAACATGTCTGGTGGGCAGTGCTGTAATATGAACATATGAAATTGGCATTCATTTTTTCAGGTGCAATTCCTGTCATGAACGAAGTAATGAGTGCCACGAGAGGTGCAACCGACACATTTTCTGGTATAACGAGGCACTTAAATAACTCTGTGAGTCTTATACTTGTATTTTTCTTTAAACATTATACATTTTGTGTTCTTTATTTGCCATTTGAAATTTTGGACCATTGAAATTCTCTTAAATATCACATGTTAGCTCAGGAAATTGGGAGCTAAGAACGTCCAGGCTGGCATTGGGTGTGGAGTTGGTTTTGGCCATGGTTTTGGTGTTGGTATGTCCAACAATATCTTCTGAATACCATATATGTCGTCTATGAGTTTTTGCTCATGCGTTGGTCTATCTTAATTAAGTTTTTTCAGTCTGTTGTTTAACTGACACGTCGTTTCTTGAATGTCAGGCCTGGCTATCAAGCCTTCATTTCTACAACAAGTTCAAGCTTCTGTTATGGTAGGTGCTGGACCTCTTATCCATCATATTTTTTCCATTATGAGTTCTTATATACATGTGTTTGAAGCTTGATGCCCAAATCTGGTAGCAAGCAATGGAGAAAGTGATGACAAAATTAGGAAATAATCCTAGTCTTCCAATTAGTCAAGGCGCCGTACCAGTATCACTACAGTCCGCGAGCAGCATAACAAATGCTTCGGCAAATGAACATCCTATTGCAAGTATCAGAAAATTTGCAAAAGAAGTGCCAGAAACTGCCCCAAAAAACCTGTCTGCATATGAAGACGTTTCTAAGGGGTCCACTCTTCGAAATATTCTATCGAGCAGATCTTTCGGAACTCGAACTGAAAAGGTCATTGACAGTTTCTTGCAAAATCCTGTTTTTAAAGGAGGGGATACTGAACTGCAGGATGAGGTATGATAATACATGTTTGGTTTTAGGTTCTAAACAAGAATTTTCTTTATTACGTGTGCACAAATTTTCCTATAAGAACAATGAATGTTTGGTGTGATTTGCTCATTAAACACACTTGCACATGCATTGGTCTTGTAATGGCACGATAACGATGCAAGCTTGAGTATCATACCAGCAATGCGGATTTTATTGTTCTTTTAGCACTGGCCCTTCATTTTGAACCTCTAGATATCTCATTACGGATTTAGTTGAGCTGATTACTAATTTGTCATGGAGTCCCGATTGATGTTTTTTGCATTGTAGGTTGGACGCCTACGGCTTGAGAACCATCTCTTCCAAATGGTAAGTTTTCATAATGGCCTGTGAATATGATCCAACTTCTTCTTAGAGATGCATCATGGAAATGACTTGTTATCTAATAGTGTAAAGATGTGTTTTAGATATGGGAAATCATTGTTCACATTATAATAATAACAAGGGATTGGGAATATCTGTAGAAAAAACACAGAATTGGGCAGTACTCACTTAAAATGAGCACATCAATTTAGGACATTCAACTGAAGTGAGATCAACTATTTTAAATTTGTTCGTTCCTAGCAAAAGTGACCAGAAATCCCATTTAAACATTATTATTTAAGAAATAGAATGTTTAGACCAACGAATCTTCACTATCACTTATTTTTACATCTTTTGGATGAAGAGTTTACGAATAGCTATAGCCTCCTCGTTAAATCGCAGTTTATTCGTAAAATTGATTCGACTTATTCTGTTGCCTGTATTTGCAGGTAATGATGCATCAGAAATTTATTCAAGAGCTCAGGGAGGAAAATAACAAGCTTCACCAAATACTAGTGGAAGACCTGAAAATACCTCCCAGCAGGCTCCAAGCAAGTAACATAGGTAGAAAAATTCCTCCGTGTTCGGATTGTTTCGAGTGCCGAAGAAAGCAAAGGAGAAGGAGAAGCTAATCAATCTGAATGATTTCCCTGACATGGTTAAGGCCGCATTCAATTGATTCTTCAGAGATACCTTCTCTAGTTGCTACAGTTTCTCGAAAGCACTTGAACGCGGTCTGAACAAAAAAGTCAAGGTATTGAGTTCACATCGCAAATGTTAACAAATGGCATCATGTTTTCATACAAAATTGCAACACAGGAACTTAGGGATAACATTGAGTTCACACCAGGTCCTGATGAAAAAGAGCTTAGTTTGTTTGAACAAAACAAAACATGCCTTTGTTGGAAATTTTGAATTTTAGTTTTAGGTGTAAAGCTAGTTTTACACGTGGTTCTTGTGGTGCAAGTAAAAAGCACATAGCCAATTTTGACTTGACTTACTAAATTGCTTAGGAGGAGAATGTTGTGTGTTAGAAGTCTCCATAGTCCATCCCATCTTCTATGAAATGATTTTGTATCTGCAAACTTTCTCTCTTTCACATTCTTCTTCTCTTTTCCAATTTGCCTTCATTATAATGAAAAGAACAGATGTGCACCATGAACACCAC
mRNA sequence
CTTTCATCTTCCTCTATTTCTTCAAACCGAGAGACCATTGAAAACTTGTAGAGTCGAAAGATTGAAGGCTCGTTGAAGAATGGAAGCTACAAATGTCTCAGAAAGTAAGGGTACGATGATCTCTCAGAAAGGGCAATTTCGGGGAATCCGAATAGAGAATCCCTTCACTTTGAAGGTGGGTCAAATATTTACAGGCTTCGGCGTCGGCTGTGGCGTCGGTATCGGCGTTGGCCGCCCCATAAACATGGGTGCAATTCCTGTCATGAACGAAGTAATGAGTGCCACGAGAGGTGCAACCGACACATTTTCTGGTATAACGAGGCACTTAAATAACTCTCTCAGGAAATTGGGAGCTAAGAACGTCCAGGCTGGCATTGGGTGTGGAGTTGGTTTTGGCCATGGTTTTGGTGTTGGCCTGGCTATCAAGCCTTCATTTCTACAACAAGTTCAAGCTTCTGTTATGGTAGGAAATAATCCTAGTCTTCCAATTAGTCAAGGCGCCGTACCAGTATCACTACAGTCCGCGAGCAGCATAACAAATGCTTCGGCAAATGAACATCCTATTGCAAGTATCAGAAAATTTGCAAAAGAAGTGCCAGAAACTGCCCCAAAAAACCTGTCTGCATATGAAGACGTTTCTAAGGGGTCCACTCTTCGAAATATTCTATCGAGCAGATCTTTCGGAACTCGAACTGAAAAGGTCATTGACAGTTTCTTGCAAAATCCTGTTTTTAAAGGAGGGGATACTGAACTGCAGGATGAGGTTGGACGCCTACGGCTTGAGAACCATCTCTTCCAAATGGTAATGATGCATCAGAAATTTATTCAAGAGCTCAGGGAGGAAAATAACAAGCTTCACCAAATACTAGTGGAAGACCTGAAAATACCTCCCAGCAGGCTCCAAGCAAGTAACATAGGTAGAAAAATTCCTCCGTGTTCGGATTGTTTCGAGTGCCGAAGAAAGCAAAGGAGAAGGAGAAGCTAATCAATCTGAATGATTTCCCTGACATGGTTAAGGCCGCATTCAATTGATTCTTCAGAGATACCTTCTCTAGTTGCTACAGTTTCTCGAAAGCACTTGAACGCGGTCTGAACAAAAAAGTCAAGGTATTGAGTTCACATCGCAAATGTTAACAAATGGCATCATGTTTTCATACAAAATTGCAACACAGGAACTTAGGGATAACATTGAGTTCACACCAGGTCCTGATGAAAAAGAGCTTAGTTTGTTTGAACAAAACAAAACATGCCTTTGTTGGAAATTTTGAATTTTAGTTTTAGGTGTAAAGCTAGTTTTACACGTGGTTCTTGTGGTGCAAGTAAAAAGCACATAGCCAATTTTGACTTGACTTACTAAATTGCTTAGGAGGAGAATGTTGTGTGTTAGAAGTCTCCATAGTCCATCCCATCTTCTATGAAATGATTTTGTATCTGCAAACTTTCTCTCTTTCACATTCTTCTTCTCTTTTCCAATTTGCCTTCATTATAATGAAAAGAACAGATGTGCACCATGAACACCAC
Coding sequence (CDS)
ATGGAAGCTACAAATGTCTCAGAAAGTAAGGGTACGATGATCTCTCAGAAAGGGCAATTTCGGGGAATCCGAATAGAGAATCCCTTCACTTTGAAGGTGGGTCAAATATTTACAGGCTTCGGCGTCGGCTGTGGCGTCGGTATCGGCGTTGGCCGCCCCATAAACATGGGTGCAATTCCTGTCATGAACGAAGTAATGAGTGCCACGAGAGGTGCAACCGACACATTTTCTGGTATAACGAGGCACTTAAATAACTCTCTCAGGAAATTGGGAGCTAAGAACGTCCAGGCTGGCATTGGGTGTGGAGTTGGTTTTGGCCATGGTTTTGGTGTTGGCCTGGCTATCAAGCCTTCATTTCTACAACAAGTTCAAGCTTCTGTTATGGTAGGAAATAATCCTAGTCTTCCAATTAGTCAAGGCGCCGTACCAGTATCACTACAGTCCGCGAGCAGCATAACAAATGCTTCGGCAAATGAACATCCTATTGCAAGTATCAGAAAATTTGCAAAAGAAGTGCCAGAAACTGCCCCAAAAAACCTGTCTGCATATGAAGACGTTTCTAAGGGGTCCACTCTTCGAAATATTCTATCGAGCAGATCTTTCGGAACTCGAACTGAAAAGGTCATTGACAGTTTCTTGCAAAATCCTGTTTTTAAAGGAGGGGATACTGAACTGCAGGATGAGGTTGGACGCCTACGGCTTGAGAACCATCTCTTCCAAATGGTAATGATGCATCAGAAATTTATTCAAGAGCTCAGGGAGGAAAATAACAAGCTTCACCAAATACTAGTGGAAGACCTGAAAATACCTCCCAGCAGGCTCCAAGCAAGTAACATAGGTAGAAAAATTCCTCCGTGTTCGGATTGTTTCGAGTGCCGAAGAAAGCAAAGGAGAAGGAGAAGCTAA
Protein sequence
MEATNVSESKGTMISQKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIPVMNEVMSATRGATDTFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFLQQVQASVMVGNNPSLPISQGAVPVSLQSASSITNASANEHPIASIRKFAKEVPETAPKNLSAYEDVSKGSTLRNILSSRSFGTRTEKVIDSFLQNPVFKGGDTELQDEVGRLRLENHLFQMVMMHQKFIQELREENNKLHQILVEDLKIPPSRLQASNIGRKIPPCSDCFECRRKQRRRRS
Homology
BLAST of Lsi05G000200 vs. ExPASy TrEMBL
Match:
A0A1S3CPX8 (uncharacterized protein LOC103503467 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503467 PE=4 SV=1)
HSP 1 Score: 527.7 bits (1358), Expect = 3.2e-146
Identity = 271/310 (87.42%), Postives = 286/310 (92.26%), Query Frame = 0
Query: 1 MEATNVSESKGTMISQKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
MEAT+VS SKGT+IS+KGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP
Sbjct: 1 MEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
Query: 61 VMNEVMSATRGATDTFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFL 120
VMNE+MSATRGATD FSGITRHLNNSLRKLGA N+QAGIGCGVGFGHGFG+GLAIKPSFL
Sbjct: 61 VMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVGFGHGFGIGLAIKPSFL 120
Query: 121 QQVQASVMV---------GNNPSLPISQGAVPVSLQSASSITNASANEHPIASIRKFAKE 180
QV +S MV GNNPSLPISQGAVPVSLQSASS+TNAS NEHPIASIRK AKE
Sbjct: 121 HQVHSSAMVAMEKVMTKLGNNPSLPISQGAVPVSLQSASSMTNASENEHPIASIRKIAKE 180
Query: 181 VPETAPKNLSAYEDVSKGSTLRNILSSRSFGTRTEKVIDSFLQNPVFKGGDTELQDEVGR 240
VP TAP+NLS Y D+SKGSTL+N LSSRS+GTRTEKVIDSFLQNPVFKG DTEL+DEVGR
Sbjct: 181 VPGTAPENLSGYRDMSKGSTLQNALSSRSYGTRTEKVIDSFLQNPVFKGEDTELKDEVGR 240
Query: 241 LRLENHLFQMVMMHQKFIQELREENNKLHQILVEDLKIPPSRLQASNIGRKIPPCSDCFE 300
LRLENHLFQMV+MHQK IQELREENNKLHQILVEDLKIPPS+LQASNIGR IPPCSDCFE
Sbjct: 241 LRLENHLFQMVIMHQKLIQELREENNKLHQILVEDLKIPPSKLQASNIGRNIPPCSDCFE 300
Query: 301 CRRKQRRRRS 302
CRRKQRRRRS
Sbjct: 301 CRRKQRRRRS 310
BLAST of Lsi05G000200 vs. ExPASy TrEMBL
Match:
A0A1S3CRB7 (uncharacterized protein LOC103503467 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503467 PE=4 SV=1)
HSP 1 Score: 526.6 bits (1355), Expect = 7.0e-146
Identity = 270/310 (87.10%), Postives = 286/310 (92.26%), Query Frame = 0
Query: 1 MEATNVSESKGTMISQKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
MEAT+VS SKGT+IS+KGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP
Sbjct: 1 MEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
Query: 61 VMNEVMSATRGATDTFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFL 120
VMNE+MSATRGATD FSGITRHLNNSLRKLGA N+QAGIGCGVGFGHGFG+GLAIKPSFL
Sbjct: 61 VMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVGFGHGFGIGLAIKPSFL 120
Query: 121 QQVQASVM---------VGNNPSLPISQGAVPVSLQSASSITNASANEHPIASIRKFAKE 180
QV +S M +GNNPSLPISQGAVPVSLQSASS+TNAS NEHPIASIRK AKE
Sbjct: 121 HQVHSSAMQAMEKVMTKLGNNPSLPISQGAVPVSLQSASSMTNASENEHPIASIRKIAKE 180
Query: 181 VPETAPKNLSAYEDVSKGSTLRNILSSRSFGTRTEKVIDSFLQNPVFKGGDTELQDEVGR 240
VP TAP+NLS Y D+SKGSTL+N LSSRS+GTRTEKVIDSFLQNPVFKG DTEL+DEVGR
Sbjct: 181 VPGTAPENLSGYRDMSKGSTLQNALSSRSYGTRTEKVIDSFLQNPVFKGEDTELKDEVGR 240
Query: 241 LRLENHLFQMVMMHQKFIQELREENNKLHQILVEDLKIPPSRLQASNIGRKIPPCSDCFE 300
LRLENHLFQMV+MHQK IQELREENNKLHQILVEDLKIPPS+LQASNIGR IPPCSDCFE
Sbjct: 241 LRLENHLFQMVIMHQKLIQELREENNKLHQILVEDLKIPPSKLQASNIGRNIPPCSDCFE 300
Query: 301 CRRKQRRRRS 302
CRRKQRRRRS
Sbjct: 301 CRRKQRRRRS 310
BLAST of Lsi05G000200 vs. ExPASy TrEMBL
Match:
A0A0A0LHI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912960 PE=4 SV=1)
HSP 1 Score: 507.7 bits (1306), Expect = 3.4e-140
Identity = 267/311 (85.85%), Postives = 284/311 (91.32%), Query Frame = 0
Query: 1 MEATNVSESKGTMISQKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
MEAT+VSESKGT+ISQKG FRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRP+NMGAIP
Sbjct: 53 MEATSVSESKGTVISQKGHFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPMNMGAIP 112
Query: 61 VMNEVMSATRGATDTFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFL 120
MNE+MSATRGATD FSGITRHLNNSLRKLGA N+QAGIGCGVGFGHGFG+GLAIKPSFL
Sbjct: 113 GMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVGFGHGFGIGLAIKPSFL 172
Query: 121 QQVQASVM---------VGNNPSLPISQGAVPVSLQSASSITNASANEHPIASIRKFAKE 180
QVQ+S M + NNPSLPISQGA+PVSLQSASSITNAS NEHPIASIRK AKE
Sbjct: 173 HQVQSSAMQAMEKVMTKLENNPSLPISQGAIPVSLQSASSITNASENEHPIASIRKIAKE 232
Query: 181 VPETAPKNLSAYEDVSKGSTLRNILSSRSFGTRTEKVIDSFLQNPVFKGGDTELQDEVGR 240
VP TAP++LSAY D +KGSTL+N LSSRS+GTRTEKVIDSFLQNPVFKG DTEL+DEVGR
Sbjct: 233 VPGTAPEDLSAYLD-TKGSTLQNALSSRSYGTRTEKVIDSFLQNPVFKGEDTELKDEVGR 292
Query: 241 LRLENHLFQMVMMHQKFIQELREENNKLHQILVEDLKIPPSRL-QASNIGRKIPPCSDCF 300
LRLENHLFQMV+MHQK IQELREENNKL QILVEDLKIPPS+L QASNIGRKIPPCSDCF
Sbjct: 293 LRLENHLFQMVIMHQKLIQELREENNKLRQILVEDLKIPPSKLFQASNIGRKIPPCSDCF 352
Query: 301 ECRRKQRRRRS 302
ECRRKQRR RS
Sbjct: 353 ECRRKQRRGRS 362
BLAST of Lsi05G000200 vs. ExPASy TrEMBL
Match:
A0A6J1E2H9 (uncharacterized protein LOC111025882 OS=Momordica charantia OX=3673 GN=LOC111025882 PE=4 SV=1)
HSP 1 Score: 487.3 bits (1253), Expect = 4.7e-134
Identity = 248/310 (80.00%), Postives = 279/310 (90.00%), Query Frame = 0
Query: 1 MEATNVSESKGTMISQKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
MEA NV ESKGT+ ++ +FRGIR+ENPFTLKVGQ+FTGFG+GCGVGIGVGRPINMGAIP
Sbjct: 1 MEARNVPESKGTVTFERERFRGIRMENPFTLKVGQVFTGFGIGCGVGIGVGRPINMGAIP 60
Query: 61 VMNEVMSATRGATDTFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFL 120
++NEVMSATRGATD FSGITRHLNN LRKLGA N+QAGIGCGVGFGHGFGVGLAIKPSF
Sbjct: 61 IVNEVMSATRGATDAFSGITRHLNNFLRKLGANNIQAGIGCGVGFGHGFGVGLAIKPSFQ 120
Query: 121 QQVQASVM---------VGNNPSLPISQGAVPVSLQSASSITNASANEHPIASIRKFAKE 180
QQVQ+SV+ +GNNPSLPI+QGA PVSLQSA S+TNA+A +HPIASI K AKE
Sbjct: 121 QQVQSSVVQATEKMMKKLGNNPSLPITQGAGPVSLQSAMSMTNATA-QHPIASIEKLAKE 180
Query: 181 VPETAPKNLSAYEDVSKGSTLRNILSSRSFGTRTEKVIDSFLQNPVFKGGDTELQDEVGR 240
VPET P+NLS Y +VSKGS + N +SSRSFG+RTEKVIDSFLQNPVF+GGDTEL++EVG+
Sbjct: 181 VPETVPRNLSGYGNVSKGSPVGNAVSSRSFGSRTEKVIDSFLQNPVFRGGDTELRNEVGQ 240
Query: 241 LRLENHLFQMVMMHQKFIQELREENNKLHQILVEDLKIPPSRLQASNIGRKIPPCSDCFE 300
LRLENHLFQMV+MHQK IQELREEN+KLHQILVEDLK+PPS+L ASN+GRKIPPCSDCFE
Sbjct: 241 LRLENHLFQMVIMHQKLIQELREENDKLHQILVEDLKVPPSKLLASNMGRKIPPCSDCFE 300
Query: 301 CRRKQRRRRS 302
CRRKQRRRRS
Sbjct: 301 CRRKQRRRRS 309
BLAST of Lsi05G000200 vs. ExPASy TrEMBL
Match:
A0A6J1H439 (uncharacterized protein LOC111459813 OS=Cucurbita moschata OX=3662 GN=LOC111459813 PE=4 SV=1)
HSP 1 Score: 478.8 bits (1231), Expect = 1.7e-131
Identity = 251/310 (80.97%), Postives = 268/310 (86.45%), Query Frame = 0
Query: 1 MEATNVSESKGTMISQKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
MEA V ESKGT+ S++GQFRGIR++NPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP
Sbjct: 1 MEARIVPESKGTVTSERGQFRGIRMDNPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
Query: 61 VMNEVMSATRGATDTFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFL 120
VMNEVMSATRGATD SG+TRHLNNSLRKLGAKN+Q GIGCGVGFGHGFGVGLAIKPSFL
Sbjct: 61 VMNEVMSATRGATDALSGVTRHLNNSLRKLGAKNIQGGIGCGVGFGHGFGVGLAIKPSFL 120
Query: 121 QQVQASVM---------VGNNPSLPISQGAVPVSLQSASSITNASANEHPIASIRKFAKE 180
QQVQ+SVM +GNNP+L ISQ AVPVSLQSA SITNASAN+HP+ASIR+FAKE
Sbjct: 121 QQVQSSVMQAMEKMVTKLGNNPNLAISQSAVPVSLQSAMSITNASANKHPVASIREFAKE 180
Query: 181 VPETAPKNLSAYEDVSKGSTLRNILSSRSFGTRTEKVIDSFLQNPVFKGGDTELQDEVGR 240
+PETAP+NL LSSRSF TRTEKVIDSFLQNPVFKGGDTELQDEVGR
Sbjct: 181 MPETAPQNL---------------LSSRSFETRTEKVIDSFLQNPVFKGGDTELQDEVGR 240
Query: 241 LRLENHLFQMVMMHQKFIQELREENNKLHQILVEDLKIPPSRLQASNIGRKIPPCSDCFE 300
L LEN LFQMVMMHQK IQEL+EENNKLHQILVEDLKIPPSRLQASN GRK PCSDC E
Sbjct: 241 LPLENRLFQMVMMHQKLIQELKEENNKLHQILVEDLKIPPSRLQASNTGRKFSPCSDCLE 295
Query: 301 CRRKQRRRRS 302
CRRK+RRRRS
Sbjct: 301 CRRKERRRRS 295
BLAST of Lsi05G000200 vs. NCBI nr
Match:
XP_038888208.1 (uncharacterized protein LOC120078076 [Benincasa hispida])
HSP 1 Score: 550.4 bits (1417), Expect = 9.4e-153
Identity = 284/310 (91.61%), Postives = 294/310 (94.84%), Query Frame = 0
Query: 1 MEATNVSESKGTMISQKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
MEATNVSESKGT+ISQ+GQFRGIRIENPFTLKVGQIFTGFGVGCG+GIGVGRPINMGAIP
Sbjct: 1 MEATNVSESKGTVISQEGQFRGIRIENPFTLKVGQIFTGFGVGCGIGIGVGRPINMGAIP 60
Query: 61 VMNEVMSATRGATDTFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFL 120
VMNEVMSATRGATD FSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFL
Sbjct: 61 VMNEVMSATRGATDAFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFL 120
Query: 121 QQVQASVM---------VGNNPSLPISQGAVPVSLQSASSITNASANEHPIASIRKFAKE 180
Q VQ+SVM +GNNPSLP+SQGAVPVSLQSASSITNASANEHPIASIR+FAKE
Sbjct: 121 QVVQSSVMQAMEKVMTKLGNNPSLPMSQGAVPVSLQSASSITNASANEHPIASIREFAKE 180
Query: 181 VPETAPKNLSAYEDVSKGSTLRNILSSRSFGTRTEKVIDSFLQNPVFKGGDTELQDEVGR 240
VPETAP NLS YEDVSKGSTLRN LSSRSFGTRTEKVIDSFLQNPVFKGG+ ELQDEVGR
Sbjct: 181 VPETAPGNLSGYEDVSKGSTLRNTLSSRSFGTRTEKVIDSFLQNPVFKGGENELQDEVGR 240
Query: 241 LRLENHLFQMVMMHQKFIQELREENNKLHQILVEDLKIPPSRLQASNIGRKIPPCSDCFE 300
LRLENHLFQMVM+HQK IQELREENNKLHQILVEDLKIPPS+LQASNIGRKIPPCSDCFE
Sbjct: 241 LRLENHLFQMVMVHQKLIQELREENNKLHQILVEDLKIPPSKLQASNIGRKIPPCSDCFE 300
Query: 301 CRRKQRRRRS 302
CRRKQRRRRS
Sbjct: 301 CRRKQRRRRS 310
BLAST of Lsi05G000200 vs. NCBI nr
Match:
XP_008465883.1 (PREDICTED: uncharacterized protein LOC103503467 isoform X2 [Cucumis melo])
HSP 1 Score: 527.7 bits (1358), Expect = 6.5e-146
Identity = 271/310 (87.42%), Postives = 286/310 (92.26%), Query Frame = 0
Query: 1 MEATNVSESKGTMISQKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
MEAT+VS SKGT+IS+KGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP
Sbjct: 1 MEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
Query: 61 VMNEVMSATRGATDTFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFL 120
VMNE+MSATRGATD FSGITRHLNNSLRKLGA N+QAGIGCGVGFGHGFG+GLAIKPSFL
Sbjct: 61 VMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVGFGHGFGIGLAIKPSFL 120
Query: 121 QQVQASVMV---------GNNPSLPISQGAVPVSLQSASSITNASANEHPIASIRKFAKE 180
QV +S MV GNNPSLPISQGAVPVSLQSASS+TNAS NEHPIASIRK AKE
Sbjct: 121 HQVHSSAMVAMEKVMTKLGNNPSLPISQGAVPVSLQSASSMTNASENEHPIASIRKIAKE 180
Query: 181 VPETAPKNLSAYEDVSKGSTLRNILSSRSFGTRTEKVIDSFLQNPVFKGGDTELQDEVGR 240
VP TAP+NLS Y D+SKGSTL+N LSSRS+GTRTEKVIDSFLQNPVFKG DTEL+DEVGR
Sbjct: 181 VPGTAPENLSGYRDMSKGSTLQNALSSRSYGTRTEKVIDSFLQNPVFKGEDTELKDEVGR 240
Query: 241 LRLENHLFQMVMMHQKFIQELREENNKLHQILVEDLKIPPSRLQASNIGRKIPPCSDCFE 300
LRLENHLFQMV+MHQK IQELREENNKLHQILVEDLKIPPS+LQASNIGR IPPCSDCFE
Sbjct: 241 LRLENHLFQMVIMHQKLIQELREENNKLHQILVEDLKIPPSKLQASNIGRNIPPCSDCFE 300
Query: 301 CRRKQRRRRS 302
CRRKQRRRRS
Sbjct: 301 CRRKQRRRRS 310
BLAST of Lsi05G000200 vs. NCBI nr
Match:
XP_008465882.1 (PREDICTED: uncharacterized protein LOC103503467 isoform X1 [Cucumis melo])
HSP 1 Score: 526.6 bits (1355), Expect = 1.5e-145
Identity = 270/310 (87.10%), Postives = 286/310 (92.26%), Query Frame = 0
Query: 1 MEATNVSESKGTMISQKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
MEAT+VS SKGT+IS+KGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP
Sbjct: 1 MEATSVSGSKGTVISEKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
Query: 61 VMNEVMSATRGATDTFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFL 120
VMNE+MSATRGATD FSGITRHLNNSLRKLGA N+QAGIGCGVGFGHGFG+GLAIKPSFL
Sbjct: 61 VMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVGFGHGFGIGLAIKPSFL 120
Query: 121 QQVQASVM---------VGNNPSLPISQGAVPVSLQSASSITNASANEHPIASIRKFAKE 180
QV +S M +GNNPSLPISQGAVPVSLQSASS+TNAS NEHPIASIRK AKE
Sbjct: 121 HQVHSSAMQAMEKVMTKLGNNPSLPISQGAVPVSLQSASSMTNASENEHPIASIRKIAKE 180
Query: 181 VPETAPKNLSAYEDVSKGSTLRNILSSRSFGTRTEKVIDSFLQNPVFKGGDTELQDEVGR 240
VP TAP+NLS Y D+SKGSTL+N LSSRS+GTRTEKVIDSFLQNPVFKG DTEL+DEVGR
Sbjct: 181 VPGTAPENLSGYRDMSKGSTLQNALSSRSYGTRTEKVIDSFLQNPVFKGEDTELKDEVGR 240
Query: 241 LRLENHLFQMVMMHQKFIQELREENNKLHQILVEDLKIPPSRLQASNIGRKIPPCSDCFE 300
LRLENHLFQMV+MHQK IQELREENNKLHQILVEDLKIPPS+LQASNIGR IPPCSDCFE
Sbjct: 241 LRLENHLFQMVIMHQKLIQELREENNKLHQILVEDLKIPPSKLQASNIGRNIPPCSDCFE 300
Query: 301 CRRKQRRRRS 302
CRRKQRRRRS
Sbjct: 301 CRRKQRRRRS 310
BLAST of Lsi05G000200 vs. NCBI nr
Match:
XP_011652692.1 (uncharacterized protein LOC101209798 isoform X2 [Cucumis sativus])
HSP 1 Score: 509.6 bits (1311), Expect = 1.8e-140
Identity = 268/311 (86.17%), Postives = 284/311 (91.32%), Query Frame = 0
Query: 1 MEATNVSESKGTMISQKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
MEAT+VSESKGT+ISQKG FRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRP+NMGAIP
Sbjct: 1 MEATSVSESKGTVISQKGHFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPMNMGAIP 60
Query: 61 VMNEVMSATRGATDTFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFL 120
MNE+MSATRGATD FSGITRHLNNSLRKLGA N+QAGIGCGVGFGHGFG+GLAIKPSFL
Sbjct: 61 GMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVGFGHGFGIGLAIKPSFL 120
Query: 121 QQVQASVMVG---------NNPSLPISQGAVPVSLQSASSITNASANEHPIASIRKFAKE 180
QVQ+S MV NNPSLPISQGA+PVSLQSASSITNAS NEHPIASIRK AKE
Sbjct: 121 HQVQSSAMVAMEKVMTKLENNPSLPISQGAIPVSLQSASSITNASENEHPIASIRKIAKE 180
Query: 181 VPETAPKNLSAYEDVSKGSTLRNILSSRSFGTRTEKVIDSFLQNPVFKGGDTELQDEVGR 240
VP TAP++LSAY D +KGSTL+N LSSRS+GTRTEKVIDSFLQNPVFKG DTEL+DEVGR
Sbjct: 181 VPGTAPEDLSAYLD-TKGSTLQNALSSRSYGTRTEKVIDSFLQNPVFKGEDTELKDEVGR 240
Query: 241 LRLENHLFQMVMMHQKFIQELREENNKLHQILVEDLKIPPSRL-QASNIGRKIPPCSDCF 300
LRLENHLFQMV+MHQK IQELREENNKL QILVEDLKIPPS+L QASNIGRKIPPCSDCF
Sbjct: 241 LRLENHLFQMVIMHQKLIQELREENNKLRQILVEDLKIPPSKLFQASNIGRKIPPCSDCF 300
Query: 301 ECRRKQRRRRS 302
ECRRKQRR RS
Sbjct: 301 ECRRKQRRGRS 310
BLAST of Lsi05G000200 vs. NCBI nr
Match:
XP_004148359.1 (uncharacterized protein LOC101209798 isoform X1 [Cucumis sativus])
HSP 1 Score: 507.7 bits (1306), Expect = 7.0e-140
Identity = 267/311 (85.85%), Postives = 284/311 (91.32%), Query Frame = 0
Query: 1 MEATNVSESKGTMISQKGQFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIP 60
MEAT+VSESKGT+ISQKG FRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRP+NMGAIP
Sbjct: 1 MEATSVSESKGTVISQKGHFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPMNMGAIP 60
Query: 61 VMNEVMSATRGATDTFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFL 120
MNE+MSATRGATD FSGITRHLNNSLRKLGA N+QAGIGCGVGFGHGFG+GLAIKPSFL
Sbjct: 61 GMNELMSATRGATDAFSGITRHLNNSLRKLGATNIQAGIGCGVGFGHGFGIGLAIKPSFL 120
Query: 121 QQVQASVM---------VGNNPSLPISQGAVPVSLQSASSITNASANEHPIASIRKFAKE 180
QVQ+S M + NNPSLPISQGA+PVSLQSASSITNAS NEHPIASIRK AKE
Sbjct: 121 HQVQSSAMQAMEKVMTKLENNPSLPISQGAIPVSLQSASSITNASENEHPIASIRKIAKE 180
Query: 181 VPETAPKNLSAYEDVSKGSTLRNILSSRSFGTRTEKVIDSFLQNPVFKGGDTELQDEVGR 240
VP TAP++LSAY D +KGSTL+N LSSRS+GTRTEKVIDSFLQNPVFKG DTEL+DEVGR
Sbjct: 181 VPGTAPEDLSAYLD-TKGSTLQNALSSRSYGTRTEKVIDSFLQNPVFKGEDTELKDEVGR 240
Query: 241 LRLENHLFQMVMMHQKFIQELREENNKLHQILVEDLKIPPSRL-QASNIGRKIPPCSDCF 300
LRLENHLFQMV+MHQK IQELREENNKL QILVEDLKIPPS+L QASNIGRKIPPCSDCF
Sbjct: 241 LRLENHLFQMVIMHQKLIQELREENNKLRQILVEDLKIPPSKLFQASNIGRKIPPCSDCF 300
Query: 301 ECRRKQRRRRS 302
ECRRKQRR RS
Sbjct: 301 ECRRKQRRGRS 310
BLAST of Lsi05G000200 vs. TAIR 10
Match:
AT4G17540.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 260.0 bits (663), Expect = 2.4e-69
Identity = 143/297 (48.15%), Postives = 197/297 (66.33%), Query Frame = 0
Query: 9 SKGTMISQKG---QFRGIRIENPFTLKVGQIFTGFGVGCGVGIGVGRPINMGAIPVMNEV 68
S G ++ ++G RGI+IENPF K Q+FTGFGVGCGVGIG G P+N+G+IP++ E+
Sbjct: 11 SNGVVMKKEGLGFSKRGIKIENPFAFKALQVFTGFGVGCGVGIGSGAPLNLGSIPMVGEI 70
Query: 69 MSATRGATDTFSGITRHLNNSLRKLGAKNVQAGIGCGVGFGHGFGVGLAIKPSFLQQVQA 128
M++ RGAT+ FSG T H+N +LRKLGA+N+QAG+GCGVGFGHGFGVG+A+KPS + ++QA
Sbjct: 71 MNSARGATNVFSGATHHVNGALRKLGARNIQAGVGCGVGFGHGFGVGIAVKPSAIHKLQA 130
Query: 129 SVMVGNNPSLPISQGAVPVSLQSASSITNASANEHPIASIRKFAKEVPETAPKNLSAYED 188
S+M G +L G S ++ + + S+ K V A
Sbjct: 131 SIM-GTASNLMTKLGRT-----SETTSSQTETEDQVSQSVTGHKKHVDTKASLK------ 190
Query: 189 VSKGSTLRNILSSRSFGTRTEKVIDSFLQNPVFKGGDTELQD-EVGRLRLENHLFQMVMM 248
+ GS+ +SR+FGTRTEKVI+SFL NP+ K DT ++ +V +L E+ + QMV+
Sbjct: 191 -NSGSS----TNSRTFGTRTEKVINSFLDNPILKHQDTTAEERQVTQLESESLMLQMVLK 250
Query: 249 HQKFIQELREENNKLHQILVEDLKIPPSRLQ-ASNIGRKIPPCSDCFECRRKQRRRR 301
HQK I E+ EEN KL +I++EDLK+ P +L+ S+ + PPC DCFECRRKQRR R
Sbjct: 251 HQKLIDEVMEENEKLRRIIIEDLKVSPEKLKLVSSYNYETPPCKDCFECRRKQRRNR 290
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3CPX8 | 3.2e-146 | 87.42 | uncharacterized protein LOC103503467 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S3CRB7 | 7.0e-146 | 87.10 | uncharacterized protein LOC103503467 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A0A0LHI5 | 3.4e-140 | 85.85 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912960 PE=4 SV=1 | [more] |
A0A6J1E2H9 | 4.7e-134 | 80.00 | uncharacterized protein LOC111025882 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1H439 | 1.7e-131 | 80.97 | uncharacterized protein LOC111459813 OS=Cucurbita moschata OX=3662 GN=LOC1114598... | [more] |
Match Name | E-value | Identity | Description | |
XP_038888208.1 | 9.4e-153 | 91.61 | uncharacterized protein LOC120078076 [Benincasa hispida] | [more] |
XP_008465883.1 | 6.5e-146 | 87.42 | PREDICTED: uncharacterized protein LOC103503467 isoform X2 [Cucumis melo] | [more] |
XP_008465882.1 | 1.5e-145 | 87.10 | PREDICTED: uncharacterized protein LOC103503467 isoform X1 [Cucumis melo] | [more] |
XP_011652692.1 | 1.8e-140 | 86.17 | uncharacterized protein LOC101209798 isoform X2 [Cucumis sativus] | [more] |
XP_004148359.1 | 7.0e-140 | 85.85 | uncharacterized protein LOC101209798 isoform X1 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
AT4G17540.1 | 2.4e-69 | 48.15 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... | [more] |