Lsi05G000140 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G000140
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ataxin-10
Location	chr05: 236046 .. 242942 (-)
RNA-Seq Expression	Lsi05G000140
Synteny	Lsi05G000140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTTAGAAGTAATAAGCCTCACGCGTACCCCCGTTCTCATCTCTTCTTCATCGTTTAGCTCCAGCCGCCACCTTGTCTCCCTTTCGGGTTCCACCCGCCGCCGTTTCTCAGTGACGCCGCCGCTCGTGTCCGTAGTCCAGCGCCGTCGACCGTCGACGACCGGCAGACTGTCCGTCAGTCGCGAGGTCGTCCGATTTTGTGGCGTTTTGTCCAGCCGTCGCGCCTCCCGCCGCCTCTGCTCCATTTGCCGCCAGTCACTGGAAGCAGTCCGCCGTCCTTAGTCGCCGCACGTCGCCGGAATCCGCCGTGTCTCGTCGGAACCTTGTATTGGGTAAGATTTTGGTATTTTGGTGGGTTTTTCTTGAAGTTCTTTAATAACCATTGACCTTTGGCATAAGGTTGTTGATACCCATGAGGCTTTGAATTGTAGATTGGAGATTTGAAGGTTTTGGAGGTGCTGTCCAGCGGTATCTTGGAGCATTGTAAGTGTTTCTTTTTTGTAAGCTTCGAGTTATCTTTGGTGAAATCTTGATTACCCACTAAGTTTTGGGGCTAATTTTGAGTTACCCATAAGGTTTGAAGCATCAATTCAATTCTTTGGAGGTCGTTAGTGTGCTGTCCAACAGGTTCGAGATCGGTTTTGGCATTGCTTGGTAAGTGATTTATGTTCCTAAAATCCTTTTGAATTGGTTTATGATTGATGTAAGACCCTTAATGGTGATTTATATGTAGATTCAAATCTTTGTGCACAGTGGGAAGTAAGTTGGACCAAATACTTTTGGGTAAGTTGTGTTGGTTATTTTGGCATGATTGAATGTTTGGAATTAGGCATAAAGGTTAAGTTTAATTTTGGTTCATGTCCTAGGATTTGATTAAGAGTTTGTGAATACTAGAGGAGGGGAGATTGGTTTGCTTGGATAAATATTTGGCCTCAAATTGGAGGTCAGTAATCTTACTATTGGAACTGTGTGCTAGTTGACATAGTTAGCAAGTTATTTTTGGCTTGTCTAAGTATGCTTGATATGTTTTACATGATTAAAGAGGATGTATGAGCACGATATTACTTTCATGAGATATTTTATGTTTCCATGTTGTGGGACCCTTATGTATGATGCAAGTTAATACTATTAGTGATAATTGCCCTCCTAACCATAGTGATGTACACCATCAGAGGTTTGTGATCCTACGGGTTCACTAGAGGTTGTGATCCTTCGGTTCACCAGAGGTTTGTGTTCCTTCAGGTTCACTAGTGGTTTGTGTTCCTTCGGGTTCACCAGATAGAGGTATGTGTTCCTTCAGGTTCACCAGATAGAGGTATGTGTTCCTTCAAGTTCACCAGATAGAAGTTTGTGTTTCCGTCGGGATTCACTAGATTTTATGGGTACATCTCACCTACGGTAGGGCGGGTTAAATTGTTTACTTAGATGATCATCCATGATAAGTTACAGACTACAGTATGCATGTCCCACTAGTATGAATGCATTTATTGGATATTAATGCATAGCCTGACGCTGGTAGTGGGGTTACTTATTGAGTATTTTATATGCTCACCCTTTCATATTTTATGTTTTTAGGTAAAGGAAAGGACGTATCGGCGCATTATAAGAAGAATCCGTGACCGTGCCAATTTGACTAGTTAGAAGCTTTCACTCATGTCTATCTTTCATGATTTAGTTGTCAGTCATTGAATGTTTGAACTTGGATTTTTTATTATTTGCACACTTAAAACATTTAGTTATTTCTATGTTCTAAACTTATGTTTTTCAAAGGGATTCTTTACAAAGGTTTTGGAGTGATTTGAATTCTTATCCTATTGAAGTTATTTATTTTGTGAAGTTATTTGATTTTAGTTAAAATTGCTAAAGAGTTTTTGCTTTGAAATTCATGCATGCATGTAGTAACGGCCATGTTAGTAGTCTTAGAAAGTCAGGTCGTTACAGTTTTCATTGGCAATAGTCGTTTTCAATTCAATTGGGGTGTTTTGGTTGAGTTTCAAATTTCAGAATTTTTATGGACAGTTTCTGTTTGCTTGATTAAGTTATGGTAATGGCGACTTTGAGAGAAAATTTGATGGTTCAGAACCTCCATTTGAGGATGGGAGGCAACTTCCAATAAAAAATTTCTTTGGGTAATTCTTTAAGGCCTTGCTAGAGTCAATTTACAATATTTATTTGGGTTTCATTGTTGGAACTAATTCTAGTCATGTTATAGGATTGGGGGCAAACTTCCGTAAGCTAAAGGAGGATTATTTCATTGATATTAGAGGCCCAATTTTGAGGTAAGTGATCTTATTGTTGGAATGCCCAAGAGAAAAGTTGGGTGTTTATGTGATTACTTGAGTTAGTTGTGAACCATGAAAGTCATGTATTTTAAATGCCATGAATTTGAATGCTTTGATTTATGAGCGCCATCTACAAAATTTTCCCCAAGTGATTGAGGCATGAATTGTATACACTGTGGTTTTTGAAAGTCATCTATGTCATGTTATGTGTGTCATGATTGTAAAGTTACGTGTGAATGGTCTACTATGTTGCACACATTGTGAAACCGATTTTCTATGTGGACCTCATGTATGTGTGAATATGCTCCTTAAAGTTATGAAAATGATGAATGGTTTTCCTCCTTTTTCCTCAATGATTTAATTGCATGAAAGTGGTGCATGACCAAGGGCTTCTAGTGCATGAAAGTGATGTTCTAGGGTGGATGTGTATGAGAATGATACATACCTAGAGAGACCTGAGTGTATGAAAGTGATGCACGCCCAGTGGGTTTTGTGTTTATGAAAGTGATGTATATAGAACCATGTGAATGAAAGTGGTGCACATGCTGACATAATTAAAGGGAAGGACGGACTGATTCAAGGTTACTAGCTAAAGAAGTAAATATCTCTTGAGACTCAGATTGGAAATTGGTAAAAAAGAAAGAAAGCAAGTTGTTGGTTTTGAATTGAAGAGTTATCTGCAAGGCATCTCAAGGTACTAGGATTACATCCATACCCTTGTTTTAGAACTCAAGGGCACAGTTGTACAACCTATAGAACATATCTGTTCAAGTAAGGTCATACATCCATACCCTTGTGGTGAAAAGACTCTAGCTTAGTTAGCTAGATCAGGAGTAAAACTTTTGGAGTTTAAAAGCAATGGCAATCAGTGAAGGAAGATCCCACTAAAGAAGGATTATCCAACTCGAAATATAAGATTGATTGAAGAGTTACATAGAGTCATACCTTGTGTATTGAGTATTGAGGTTATGTTTCACTTCAAAAAAAAAAACCTTAAGTTTAGTGGCGTTAATAAAGGTATGTGGAAAAGGAAAGTACAAAAAAACTTTTGCCACTTTGTGAGATAAGGGAAACTGGCAATTTGAGACTCAAAATATGCAGGTATGGTTTGATGGTGTACAATTTGTTTTGTTTGGTTACAAGTCTTTGGATTCGATATCAAAAAGGGTCTTGTTACATTTTGGAATTTAGAATCTTAGTTGTTTAGGTTAAAGGAAATGATGTAAGCTATTGGTTAGAAATCTCAATGTTAGCATGTGGGTTTTTTGCCCAAAATAAAAGTTCGGAAGAGACAAACAGAGTAATGGAAGAGTGCTGTGATAAGCGTCTTCCTCAGACTAGCAGAGGAGTTGGAGGAAATAATTTTTTAAGTGAAGTCATTTGATAACGATAGTTGTCTAGAAACTGTTCAAACAAAATGCTAAGGCTTTCTTTGTAGAGAGGTAGATTGTTGAACTTGTTAGTTAAGTTTGGGGAGAATTTGATTTTGGGATCAAATTAGTATAAACGAAGCCATCAATCTGATGGAAAAGGAAAAGTAATCATCCTTGCATTTATATAAATTTGGGATAAGCTATTATTACAAAAGATTTAGAAGTGGAGGACCAAGTAGAAGCAAAAAGAGTAACCTTTGTATTTTCTTTGTTTGTTATCAAATACTTCCATCCTTGTGTTTATGTGTTTCTTTATTTTGTCTTCTACTTTCTAAAAACATTTTAAAGATCTTTGCAAAAATTTGAAAACTATAAAGCTTTTTTAATTTCTTTTTCTAAGAATTCAAATATGTTTTTAATGAAAGGGAAAACATATAAAAAAAATTGAGGAAGTAGGACTGGAGTTTGGAAATAGGAAACTAAAAACAAAATTGTTTTAGACTGGGCTTAGCTGTCAGAGGTTTATATGAATTTGGGCAAGGATTGGAAAAGAAAAACTGAAGTGATTAAAAATTTAAGTCTTACAAAGTCTATTACTGTATACATCCTTTCATACTGTTGCCCCATGGTATATTTATTCATTCCAAATTTGACATTTCAACTGTAGTTTTTTTTTCTTTGTAAAGAAATTGACTTTCAGGACACCTTGTTGAAGTATTGAAAGTTTTGGAATTTAAAATTACGTTAAGTTCTTGTGGAGGACAGTAATGTAAAAGAATAACTTGGTTAATTTGGTGTTAGTTAAAGCATGGGAAAATATTAAGTACTGTTAATATGAGCATAGAAGCACATTTATGAAAATTTCCTAAAGTCTACACTATGAACGAGATTCAATATTTTCGACCCAAACCAAACAACATCAAAGCAAACAAAATTGAAAAACATCTGTCCAGTTTACATGTGGTAAATTAAACATCATAATTTAGTTGCTATTTGACCGTAACCAAACATGACCATCGACTCTTCTAATATTTTAGAGTTATGAAAAAAAATTCTAACTTGAAAAAAGCTGAAAAAGTTCACTACATATACTAAGTTCTTTTGGTTTATTTAAGTGAACTAGTCTCCTGTTCTTACATAGTTAATCATTGCTTCATACTCTTGAATTTCAGATTTCTACGGAAATTTCTCAACCTTTCTTATTCAAAAGTAGCGTTGTTTTGTGGCCTACTGAGTAGTTCTATCAGCAAATGAAGAATTCATCATCATTTGAGCAGTCCATACCTGAAAGAATTAGTCAACAATTGGTAATCGCATCAAACTCTTGCACCCTAGAAGCATCCTTAGAAACCCTTATTGAAGCTTCCAAAAGTATTGAGGGTCGATCAAATTTGGCTTCTCAAAATATCCTTCCTTGTGTGCTAGAGCTGATTCAGTGTGTCATTTACACTTCTGATGTGCTGCTACTGTCATCCTTGAAGCTCCTAAGAAACCTTTGTGCTGGAGAAATTAGAAACCAGAACGTTTTCATTGAGCAAAATGGAGTTGGAGTTGTATCGAGAATTTTGCAGAATGCTATGCAGATGTGTGATCCCAATCGTATGATCATTAGACTAGGACTACAGGTTCTAGCAAATGTTTCACTGGCTGGAGAAGAGCATCAACAAGCAATTCGGCATGGATTGTTCCCTGACAAGTTTCTTTTACTTGCTCGTATTCCACATCGTGAGATTTCTGATCCTTTGAGTATGATCATCTACAACCTATGTAGTAGACACTCTGAACTGGTAGCATCATTTTGTGGTGACTCAGGGTTGCCTATTATTGAAGAAATTGTGAGGACTGCATCTTCAGGTAAACTATTAGATTTGCTTTAACTTTTCGGTCTATCTTTTCTTTTTATATATCTTCGTTATCATCGTTTATTTTCTCTTTGGAGTCTCATTTGTTTCCACACTCCATTTTGGTATTTTTGCAGTTGGTTTTGTTGAAGATTGGGTGAAGTTGATTCTTTCAAGAATCTGCTTAGAAGAACCTTATTTTCCTATGCTTTTCTCTAAGTTACGCCCTATTGAGACATATAAAGATAGCAACAAAGCTAAATGCAGTAACATTTCCTTTTCGTCAGAACAAGCATATCTTTTGACAATCATATCAGAGATACTGAATGAGCAAATTGGAAATATTGCTGTTCCGAAGGATTTTGCAACGTGTGTGTATAGAATATTTCAGAGCTCTGTTTCTATCATCGATTCTACCCCAATATGCAAGAGTGGTCTCCCAACAGGCACAATTGCAGGAGATGTTCTTGGGTACTCACTCACTATTTTAAGAGATATTTGTGCGCAAGATAGTAAGAAAGGAGATAAAGATGTATCTGAGGATGCAGTCAATGTGCTTCTCTCTCTTGGACTTATTGATTTGCTTTTGGGCATTCTCCGTGACATCGAACCTCTGGCCATACTAAAGAAAGCACTTCAACAAGCAGAGAATGAAGATAGAACAAGTCTTCCAAACTCATTAAAGTCGTGTCCATATAAAGGGTTTCGAAGAGATATTGTTGCTGTCATTGCAAATTGTTTATATAGAAGGAAGCATGTACAAGATGACGTTAGAAAGAAGAATGGAGTGTTTGTGCTATTGCAGCAGTGTGTTGCTGATGAAAACAATCCCTTTTTGAGGGAATGGGGCATCTGGGCTGTTAGGAACTTACTGGAAGGGAACTTAGAAAATCAAAAGTTAGTATCTGAATTGGAGGTTCAAGGTTCTGCAGATGTGCCTGAGATTGCTGAACTCGGTCTTCGAGTTGAGGTGGATCCGAATACTCGAAGGGCTAAGCTTGTTAATGCCTCACGACCATTCCAAGACTGACTCTTAAGGTAATTTTGTTTTGCTGAGAACTTGCCAGTGAATATATTTTTGATAATGCTTCTGAATATTATGTGTTGAAAAATCTCATTGGCTTTGAGATGATACAAACCATATGTTAGTTTAATTATTTTGTAATTTAGAGATCTTGCCTGTCAAGCTCATTTAATGTAGGGTAATTATACTGAGTAGTAATTTTAGGGATACTAATCAAGTGTATAACAACATTTTAAAAAAATTGTAAATATAACAAAGTCTATCAGTAAAGTAAGATGAAAGACCACTAAATCTGCTAAAATAGGAGACGATAGACCAAAGGAACTTGGATAAGTGGGAAACCATCCACCACCAACTTTGACAGCTTTTCCAAAG

mRNA sequence

AAAATTTAGAAGTAATAAGCCTCACGCGTACCCCCGTTCTCATCTCTTCTTCATCGTTTAGCTCCAGCCGCCACCTTGTCTCCCTTTCGGGTTCCACCCGCCGCCGTTTCTCAGTGACGCCGCCGCTCGTGTCCGTAGTCCAGCGCCGTCGACCGTCGACGACCGGCAGACTGTCCGTCAGTCGCGAGGTCGTCCGATTTTGTGGCGTTTTGTCCAGCCGTCGCGCCTCCCGCCGCCTCTGCTCCATTTGCCGCCAGTCACTGGAAGCAGTCCGCCGTCCTTAGTCGCCGCACGTCGCCGGAATCCGCCGTGTCTCGTCGGAACCTTGTATTGGGTTGTTGATACCCATGAGGCTTTGAATTGTAGATTGGAGATTTGAAGGTTTTGGAGGTGCTGTCCAGCGGTATCTTGGAGCATTGTTTGAAGCATCAATTCAATTCTTTGGAGGTCGTTAGTGTGCTGTCCAACAGGTTCGAGATCGGTTTTGGCATTGCTTGATTCAAATCTTTGTGCACAGTGGGAAGTAAGTTGGACCAAATACTTTTGGGATTTGATTAAGAGTTTGTGAATACTAGAGGAGGGGAGATTGGTTTGCTTGGATAAATATTTGGCCTCAAATTGGAGGTAAAGGAAAGGACGTATCGGCGCATTATAAGAAGAATCCGTGACCGTGCCAATTTGACTATTTCTGTTTGCTTGATTAAGTTATGGTAATGGCGACTTTGAGAGAAAATTTGATGGTTCAGAACCTCCATTTGAGGATGGGAGGCAACTTCCAATAAAAAATTTCTTTGGGATTGGGGGCAAACTTCCGTAAGCTAAAGGAGGATTATTTCATTGATATTAGAGGCCCAATTTTGAGATTTCTACGGAAATTTCTCAACCTTTCTTATTCAAAAGTAGCGTTGTTTTGTGGCCTACTGAGTAGTTCTATCAGCAAATGAAGAATTCATCATCATTTGAGCAGTCCATACCTGAAAGAATTAGTCAACAATTGGTAATCGCATCAAACTCTTGCACCCTAGAAGCATCCTTAGAAACCCTTATTGAAGCTTCCAAAAGTATTGAGGGTCGATCAAATTTGGCTTCTCAAAATATCCTTCCTTGTGTGCTAGAGCTGATTCAGTGTGTCATTTACACTTCTGATGTGCTGCTACTGTCATCCTTGAAGCTCCTAAGAAACCTTTGTGCTGGAGAAATTAGAAACCAGAACGTTTTCATTGAGCAAAATGGAGTTGGAGTTGTATCGAGAATTTTGCAGAATGCTATGCAGATGTGTGATCCCAATCGTATGATCATTAGACTAGGACTACAGGTTCTAGCAAATGTTTCACTGGCTGGAGAAGAGCATCAACAAGCAATTCGGCATGGATTGTTCCCTGACAAGTTTCTTTTACTTGCTCGTATTCCACATCGTGAGATTTCTGATCCTTTGAGTATGATCATCTACAACCTATGTAGTAGACACTCTGAACTGGTAGCATCATTTTGTGGTGACTCAGGGTTGCCTATTATTGAAGAAATTGTGAGGACTGCATCTTCAGTTGGTTTTGTTGAAGATTGGGTGAAGTTGATTCTTTCAAGAATCTGCTTAGAAGAACCTTATTTTCCTATGCTTTTCTCTAAGTTACGCCCTATTGAGACATATAAAGATAGCAACAAAGCTAAATGCAGTAACATTTCCTTTTCGTCAGAACAAGCATATCTTTTGACAATCATATCAGAGATACTGAATGAGCAAATTGGAAATATTGCTGTTCCGAAGGATTTTGCAACGTGTGTGTATAGAATATTTCAGAGCTCTGTTTCTATCATCGATTCTACCCCAATATGCAAGAGTGGTCTCCCAACAGGCACAATTGCAGGAGATGTTCTTGGGTACTCACTCACTATTTTAAGAGATATTTGTGCGCAAGATAGTAAGAAAGGAGATAAAGATGTATCTGAGGATGCAGTCAATGTGCTTCTCTCTCTTGGACTTATTGATTTGCTTTTGGGCATTCTCCGTGACATCGAACCTCTGGCCATACTAAAGAAAGCACTTCAACAAGCAGAGAATGAAGATAGAACAAGTCTTCCAAACTCATTAAAGTCGTGTCCATATAAAGGGTTTCGAAGAGATATTGTTGCTGTCATTGCAAATTGTTTATATAGAAGGAAGCATGTACAAGATGACGTTAGAAAGAAGAATGGAGTGTTTGTGCTATTGCAGCAGTGTGTTGCTGATGAAAACAATCCCTTTTTGAGGGAATGGGGCATCTGGGCTGTTAGGAACTTACTGGAAGGGAACTTAGAAAATCAAAAGTTAGTATCTGAATTGGAGGTTCAAGGTTCTGCAGATGTGCCTGAGATTGCTGAACTCGGTCTTCGAGTTGAGGTGGATCCGAATACTCGAAGGGCTAAGCTTGTTAATGCCTCACGACCATTCCAAGACTGACTCTTAAGGTAATTTTGTTTTGCTGAGAACTTGCCAGTGAATATATTTTTGATAATGCTTCTGAATATTATGTGTTGAAAAATCTCATTGGCTTTGAGATGATACAAACCATATGTTAGTTTAATTATTTTGTAATTTAGAGATCTTGCCTGTCAAGCTCATTTAATGTAGGGTAATTATACTGAGTAGTAATTTTAGGGATACTAATCAAGTGTATAACAACATTTTAAAAAAATTGTAAATATAACAAAGTCTATCAGTAAAGTAAGATGAAAGACCACTAAATCTGCTAAAATAGGAGACGATAGACCAAAGGAACTTGGATAAGTGGGAAACCATCCACCACCAACTTTGACAGCTTTTCCAAAG

Coding sequence (CDS)

ATGAAGAATTCATCATCATTTGAGCAGTCCATACCTGAAAGAATTAGTCAACAATTGGTAATCGCATCAAACTCTTGCACCCTAGAAGCATCCTTAGAAACCCTTATTGAAGCTTCCAAAAGTATTGAGGGTCGATCAAATTTGGCTTCTCAAAATATCCTTCCTTGTGTGCTAGAGCTGATTCAGTGTGTCATTTACACTTCTGATGTGCTGCTACTGTCATCCTTGAAGCTCCTAAGAAACCTTTGTGCTGGAGAAATTAGAAACCAGAACGTTTTCATTGAGCAAAATGGAGTTGGAGTTGTATCGAGAATTTTGCAGAATGCTATGCAGATGTGTGATCCCAATCGTATGATCATTAGACTAGGACTACAGGTTCTAGCAAATGTTTCACTGGCTGGAGAAGAGCATCAACAAGCAATTCGGCATGGATTGTTCCCTGACAAGTTTCTTTTACTTGCTCGTATTCCACATCGTGAGATTTCTGATCCTTTGAGTATGATCATCTACAACCTATGTAGTAGACACTCTGAACTGGTAGCATCATTTTGTGGTGACTCAGGGTTGCCTATTATTGAAGAAATTGTGAGGACTGCATCTTCAGTTGGTTTTGTTGAAGATTGGGTGAAGTTGATTCTTTCAAGAATCTGCTTAGAAGAACCTTATTTTCCTATGCTTTTCTCTAAGTTACGCCCTATTGAGACATATAAAGATAGCAACAAAGCTAAATGCAGTAACATTTCCTTTTCGTCAGAACAAGCATATCTTTTGACAATCATATCAGAGATACTGAATGAGCAAATTGGAAATATTGCTGTTCCGAAGGATTTTGCAACGTGTGTGTATAGAATATTTCAGAGCTCTGTTTCTATCATCGATTCTACCCCAATATGCAAGAGTGGTCTCCCAACAGGCACAATTGCAGGAGATGTTCTTGGGTACTCACTCACTATTTTAAGAGATATTTGTGCGCAAGATAGTAAGAAAGGAGATAAAGATGTATCTGAGGATGCAGTCAATGTGCTTCTCTCTCTTGGACTTATTGATTTGCTTTTGGGCATTCTCCGTGACATCGAACCTCTGGCCATACTAAAGAAAGCACTTCAACAAGCAGAGAATGAAGATAGAACAAGTCTTCCAAACTCATTAAAGTCGTGTCCATATAAAGGGTTTCGAAGAGATATTGTTGCTGTCATTGCAAATTGTTTATATAGAAGGAAGCATGTACAAGATGACGTTAGAAAGAAGAATGGAGTGTTTGTGCTATTGCAGCAGTGTGTTGCTGATGAAAACAATCCCTTTTTGAGGGAATGGGGCATCTGGGCTGTTAGGAACTTACTGGAAGGGAACTTAGAAAATCAAAAGTTAGTATCTGAATTGGAGGTTCAAGGTTCTGCAGATGTGCCTGAGATTGCTGAACTCGGTCTTCGAGTTGAGGTGGATCCGAATACTCGAAGGGCTAAGCTTGTTAATGCCTCACGACCATTCCAAGACTGA

Protein sequence

MKNSSSFEQSIPERISQQLVIASNSCTLEASLETLIEASKSIEGRSNLASQNILPCVLELIQCVIYTSDVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMIIRLGLQVLANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSELVASFCGDSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDSNKAKCSNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPICKSGLPTGTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGILRDIEPLAILKKALQQAENEDRTSLPNSLKSCPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNGVFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRVEVDPNTRRAKLVNASRPFQD

Homology

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BLAST of Lsi05G000140 vs. ExPASy Swiss-Prot
Match: Q2TBW0 (Ataxin-10 OS=Bos taurus OX=9913 GN=ATXN10 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.8e-22
Identity = 112/420 (26.67%), Postives = 190/420 (45.24%), Query Frame = 0


Query: 71  LLLSSLKLLRNLCAGEIRNQNVFIEQNGVGV-VSRILQNAMQMCDPNRMI--IRLGLQVL 130
           L+    + LRN C     NQN       +GV V  IL       + + ++   R GLQ L
Sbjct: 80  LITECFRCLRNACIECSVNQNSIRNLGTIGVAVDLILLFRELRVEQDSLLTAFRCGLQFL 139

Query: 131 ANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSELVASFCGDS 190
            N++   E+ Q  +    FP+ FL     P R+I    SMI++   S +SE +     + 
Sbjct: 140 GNIASRNEDSQSVVWMHAFPELFLSCLNHPDRKIVAYSSMILFT--SLNSERMKEL--EE 199

Query: 191 GLPIIEEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDSNKAKCSNI 250
            L I  ++V  A       +W  LI++   L+ P       +L      K SN+ +    
Sbjct: 200 NLNIAIDVVE-AHQKQPESEWPFLIITDHFLKSP-------ELVKAMYAKMSNQER---- 259

Query: 251 SFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPI--CKSGLPTG 310
                    +T++  ++ + +G+  + KD A     +F S   +I ST +  CK  L   
Sbjct: 260 ---------VTLLDLMIAKIVGDEPLTKDDAP----VFLSHAELIASTFVDQCKIVLKLT 319

Query: 311 TIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGIL-RDIEPLAIL 370
           +        +L  +R +     K  + D+          LG + +  G+L R I+ L ++
Sbjct: 320 SEQHTDDEEALATIRLLDVLCEKTANTDL----------LGYLQVFPGLLERVIDLLRLI 379

Query: 371 KKALQQAENEDRTSLPNSLK-----SCPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNGV 430
             A   + N    S   S+K     S   +GF+  ++ +I N  Y+ K  QD V + +G+
Sbjct: 380 HVAGNDSTN--IFSACASIKADGDVSSVAEGFKSHLIRLIGNLCYKNKDNQDKVNELDGI 439

Query: 431 FVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRVE 480
            ++L  C  D++NPFL +W ++A+RNL E N +NQ L++++E QG AD   + ++G  VE
Sbjct: 440 PLILDSCGLDDSNPFLTQWVVYAIRNLTEDNSQNQDLIAKMEEQGLADASLLKKMGFEVE 458

[Close]

BLAST of Lsi05G000140 vs. ExPASy Swiss-Prot
Match: Q5FVB0 (Ataxin-10 OS=Xenopus tropicalis OX=8364 GN=atxn10 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 8.0e-19
Identity = 102/409 (24.94%), Postives = 174/409 (42.54%), Query Frame = 0


Query: 77  KLLRNLCAGEIRNQ----NVFIEQNGVGVVSRILQNAMQMCDPNRMIIRLGLQVLANVSL 136
           + LRN C     NQ    NV + +  V ++ +I      + +P  +  R GLQ L N + 
Sbjct: 94  RCLRNACVQCASNQDSVRNVGLIEESVRLI-QIFGAPHVLQEPALVAFRCGLQFLGNTAA 153

Query: 137 AGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSELVASFCGDSGLPII 196
              + Q A+    FPD FL        ++    SM+++   +R  E V++    S L + 
Sbjct: 154 GNRDSQNAVWACAFPDLFLSCLVHDDEKVVTYSSMVLFTCINR--EKVSTLQDPSKLDVA 213

Query: 197 EEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDSNKAKCSNISFSSE 256
             +V TA S     +W+ LI+    L  P                  +  K   +S SS 
Sbjct: 214 LSVV-TAYSKYPDAEWMYLIVMDHFLLCP------------------DLVKAVYLSQSSP 273

Query: 257 QAYLLTIISEILNE--QIGNIAVPKDFATCVYRIFQSSVSIIDSTPICKSGLPTGTIAGD 316
           +   +T++  IL +  Q   ++  +  A      F S         I K   P+     +
Sbjct: 274 ER--VTLLELILGKISQKEPLSAEESEALQAIAAFLSDCFQTQCKTILKLTSPSACDEEE 333

Query: 317 VLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGILRDIEPLAILKKALQQ 376
            +   +T L DI  + + K +          LL   +  L L  L   + + +   A   
Sbjct: 334 PI--VVTRLLDILCEVTSKNEHLSCLQTCPGLLEAAVDILRLTHLAGKQSMNVFTAAHTM 393

Query: 377 AENEDRTSLPNSLKSCPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNGVFVLLQQCVADE 436
           +  +D T            GF+  ++ +I N  Y+ K  Q+ V + +G+ ++L  C  D+
Sbjct: 394 SMGQDLTHAA--------VGFKAHLIRLIGNLCYQNKENQEKVYQLDGIALILDNCSIDD 453

Query: 437 NNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRVE 480
           NNPFL +W ++A+RNL E N +NQ+L++ +E QG AD   +  +GL+ E
Sbjct: 454 NNPFLNQWAVFAIRNLTENNDKNQELIASMERQGLADSSLLKSMGLQAE 468

[Close]

BLAST of Lsi05G000140 vs. ExPASy Swiss-Prot
Match: Q4R4Y2 (Ataxin-10 OS=Macaca fascicularis OX=9541 GN=ATXN10 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-18
Identity = 99/419 (23.63%), Postives = 180/419 (42.96%), Query Frame = 0


Query: 71  LLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMII---RLGLQVL 130
           L+    + LRN C     NQN     + +GV   ++    ++      ++   R GLQ L
Sbjct: 80  LITECFRCLRNACIECSVNQNSIRNLDTIGVAVDLILLFRELRVEQEALLTAFRCGLQFL 139

Query: 131 ANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCS--RHSELVASFCG 190
            N++   E+ Q  +    FP+ FL     P ++I    SMI++   +  R  EL  +   
Sbjct: 140 GNIASRNEDSQSIVWVHAFPELFLSCLNHPDKKIVAYSSMILFTSLNHERMKELEENL-- 199

Query: 191 DSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEP-YFPMLFSKLRPIETYKDSNKAKC 250
           +  + +I+   +   S     +W  LI++ + L+ P     +F KL              
Sbjct: 200 NIAIDVIDAYQKHPES-----EWPVLIITDLFLKSPELVQAMFPKLN------------- 259

Query: 251 SNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPI--CKSGL 310
                + E+  LL ++       I  I   +   T    +F     +I ST +  CK+ L
Sbjct: 260 -----NQERVTLLDLM-------IAKITSDEPLTTDDIPVFLRHAELIASTFVDQCKTVL 319

Query: 311 PTGT--IAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGILRDIEP 370
              +     D    +   L D+  + +       +E    + +  GL++ ++ +LR I  
Sbjct: 320 KLASEEPPDDEEALATIRLLDVLCEMTAN-----TELLGYLQVFPGLLERVIDLLRVIHV 379

Query: 371 LAILKKALQQAENEDRTSLPNSLKSCPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNGVF 430
               K+      N         + +   +GF+  ++ +I N  Y+ K  QD V + +G+ 
Sbjct: 380 TG--KETTNIFSNCGCVRAEGDISNVA-EGFKSHLIRLIGNLCYKNKDNQDKVNELDGIP 439

Query: 431 VLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRVE 480
           ++L  C   ++NPFL +W I+A+RNL E N +NQ L++++E QG AD   + ++G  VE
Sbjct: 440 LILDNCNISDSNPFLTQWVIYAIRNLTEDNSQNQDLIAKMEEQGLADASLLKKVGFEVE 458

[Close]

BLAST of Lsi05G000140 vs. ExPASy Swiss-Prot
Match: P28658 (Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=1 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-18
Identity = 102/421 (24.23%), Postives = 192/421 (45.61%), Query Frame = 0


Query: 71  LLLSSLKLLRNLCAGEIRNQNVFIEQNGVGV-VSRILQNAMQMCDPNRMI--IRLGLQVL 130
           L+    + LRN C     NQN     + +GV V  +L       + + ++   R GLQ L
Sbjct: 80  LITECFRCLRNACIECSVNQNSIRNLDTIGVAVDLVLLFRELRVEQDSLLTAFRCGLQFL 139

Query: 131 ANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSELVASFCGDS 190
            NV+   EE Q  +    FP+ F+     P ++I    SMI++   S ++E +     + 
Sbjct: 140 GNVASRNEESQSIVWVHAFPELFMSCLNHPDKKIVAYCSMILFT--SLNAERMKDL--EE 199

Query: 191 GLPIIEEIVRTASSVGFVEDWVKLILSRICLEEP-YFPMLFSKLRPIETYKDSNKAKCSN 250
            L I   ++  A       +W  LI+S   L+ P     ++ KL        SN+ +   
Sbjct: 200 NLNIAINVIE-AHQKHPASEWPFLIISDHFLKSPELVEAMYGKL--------SNQER--- 259

Query: 251 ISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPI--CKSGLPT 310
                     +T++  ++ + +G   + KD  +    IF     +I ++ +  C++ L  
Sbjct: 260 ----------ITLLDIVIAKLVGEEQLTKDDIS----IFVRHAELIANSFMDQCRNVLKL 319

Query: 311 GTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGIL-RDIEPLAI 370
            +        +L  +R +          DV  +  +    LG + +  G++ R I+ L +
Sbjct: 320 TSEPHTEDKEALVTIRLL----------DVLCEMTSNTELLGYLQVFPGLMERVIDVLRV 379

Query: 371 LKKALQQAENEDRTSLPNSLKS-----CPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNG 430
           + +  +++ N    S  +SLK+        +GF+  ++ +I N  Y+ K  QD V + +G
Sbjct: 380 IHEVGKESTNIFSPS--DSLKAEGDIEHMTEGFKSHLIRLIGNLCYKNKENQDKVNELDG 439

Query: 431 VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRV 480
           + ++L     D+NNPF+ +W ++AVRNL E N +NQ +++++E QG AD   + ++G  +
Sbjct: 440 IPLILDSSNIDDNNPFMMQWVVYAVRNLTEDNSQNQDVIAKMEEQGLADASLLKKMGFEI 458

[Close]

BLAST of Lsi05G000140 vs. ExPASy Swiss-Prot
Match: Q9UBB4 (Ataxin-10 OS=Homo sapiens OX=9606 GN=ATXN10 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.1e-18
Identity = 104/429 (24.24%), Postives = 184/429 (42.89%), Query Frame = 0


Query: 71  LLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMII---RLGLQVL 130
           L+    + LRN C     NQN     + +GV   ++    ++      ++   R GLQ L
Sbjct: 80  LITECFRCLRNACIECSVNQNSIRNLDTIGVAVDLILLFRELRVEQESLLTAFRCGLQFL 139

Query: 131 ANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCS--RHSELVASFCG 190
            N++   E+ Q  +    FP+ FL     P ++I    SMI++   +  R  EL  +   
Sbjct: 140 GNIASRNEDSQSIVWVHAFPELFLSCLNHPDKKIVAYSSMILFTSLNHERMKELEENL-- 199

Query: 191 DSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEP-YFPMLFSKLRPIETYKDSNKAKC 250
           +  + +I+   +   S     +W  LI++ + L+ P     +F KL              
Sbjct: 200 NIAIDVIDAYQKHPES-----EWPFLIITDLFLKSPELVQAMFPKLN------------- 259

Query: 251 SNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPI--CKSGL 310
                + E+  LL ++       I  I   +        +F     +I ST +  CK+ L
Sbjct: 260 -----NQERVTLLDLM-------IAKITSDEPLTKDDIPVFLRHAELIASTFVDQCKTVL 319

Query: 311 PTGTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGIL-RDIEPL 370
              +        +L  +R +           + E  VN  L LG + +  G+L R I+ L
Sbjct: 320 KLASEEPPDDEEALATIRLLDV---------LCEMTVNTEL-LGYLQVFPGLLERVIDLL 379

Query: 371 AILKKALQQAEN-----------EDRTSLPNSLKSCPYKGFRRDIVAVIANCLYRRKHVQ 430
            ++  A ++  N            D +++ N        GF+  ++ +I N  Y+ K  Q
Sbjct: 380 RVIHVAGKETTNIFSNCGCVRAEGDISNVAN--------GFKSHLIRLIGNLCYKNKDNQ 439

Query: 431 DDVRKKNGVFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPE 480
           D V + +G+ ++L  C   ++NPFL +W I+A+RNL E N +NQ L++++E QG AD   
Sbjct: 440 DKVNELDGIPLILDNCNISDSNPFLTQWVIYAIRNLTEDNSQNQDLIAKMEEQGLADASL 458

[Close]

BLAST of Lsi05G000140 vs. ExPASy TrEMBL
Match: A0A5A7T6L8 (Ataxin-10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003690 PE=4 SV=1)

HSP 1 Score: 840.5 bits (2170), Expect = 3.6e-240
Identity = 432/500 (86.40%), Postives = 464/500 (92.80%), Query Frame = 0


Query: 1   MKNSSSFEQSIPERISQQLVIASNSCTLEASLETLIEASKSIEGRSNLASQNILPCVLEL 60
           MKNSS FE SIP+RI Q L +ASNS TLEASLETLIEASKS EGRSNLASQNILPCVLEL
Sbjct: 1   MKNSSPFELSIPKRIIQPLFLASNSNTLEASLETLIEASKSSEGRSNLASQNILPCVLEL 60

Query: 61  IQCVIYTS-DVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMI 120
           IQCV+YTS DVLLLSSLKLLRNLCAGEIRNQN+FIEQNGVGVVS++LQ+AM M DP+R+ 
Sbjct: 61  IQCVVYTSGDVLLLSSLKLLRNLCAGEIRNQNIFIEQNGVGVVSKVLQDAMVMNDPDRVT 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSEL 180
           IRLGLQVLANVSLAGE+HQQAI HGLFPDKFLLLAR+P  EISDPLSMI+YN+CS HSEL
Sbjct: 121 IRLGLQVLANVSLAGEKHQQAIWHGLFPDKFLLLARLPFCEISDPLSMILYNICSGHSEL 180

Query: 181 VASFCGDSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDS 240
           VAS CGD GLPIIEEIVRT SSVGFVEDWVKL+LSRICLEEPYFPMLFS+LRPI+TYKDS
Sbjct: 181 VASLCGDIGLPIIEEIVRTVSSVGFVEDWVKLLLSRICLEEPYFPMLFSQLRPIDTYKDS 240

Query: 241 NKAKCSNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPICK 300
           NKA+  ++SFSSEQAYLLT++SEILNEQIG+I VPKDFA CVYR FQSS+SIIDSTP+ K
Sbjct: 241 NKAESRDVSFSSEQAYLLTVVSEILNEQIGDIVVPKDFAMCVYRTFQSSISIIDSTPVSK 300

Query: 301 SGLPTGTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGILRDIE 360
             LPTGTIAGDVLGYSLTILRDICAQDS KGDKD+ EDAV+VLLSLGLIDLLL IL DIE
Sbjct: 301 CSLPTGTIAGDVLGYSLTILRDICAQDSSKGDKDIYEDAVDVLLSLGLIDLLLSILHDIE 360

Query: 361 PLAILKKALQQAEN-EDRTSLPNSLKSCPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNG 420
           P AILKKALQQ EN EDRTSLP +LKSCPYKGFRRDIVAVIANCLYRRKHVQDD+R+KNG
Sbjct: 361 PPAILKKALQQVENEEDRTSLPKALKSCPYKGFRRDIVAVIANCLYRRKHVQDDIRQKNG 420

Query: 421 VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRV 480
           VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLEN++LVSELEVQGSA VPEIAELGLRV
Sbjct: 421 VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENKRLVSELEVQGSAHVPEIAELGLRV 480

Query: 481 EVDPNTRRAKLVNASRPFQD 499
           EVDP TRRAKLVN+SRPFQD
Sbjct: 481 EVDPKTRRAKLVNSSRPFQD 500

[Close]

BLAST of Lsi05G000140 vs. ExPASy TrEMBL
Match: A0A1S3CPV9 (ataxin-10 OS=Cucumis melo OX=3656 GN=LOC103503465 PE=4 SV=1)

HSP 1 Score: 840.5 bits (2170), Expect = 3.6e-240
Identity = 432/500 (86.40%), Postives = 464/500 (92.80%), Query Frame = 0


Query: 1   MKNSSSFEQSIPERISQQLVIASNSCTLEASLETLIEASKSIEGRSNLASQNILPCVLEL 60
           MKNSS FE SIP+RI Q L +ASNS TLEASLETLIEASKS EGRSNLASQNILPCVLEL
Sbjct: 1   MKNSSPFELSIPKRIIQPLFLASNSNTLEASLETLIEASKSSEGRSNLASQNILPCVLEL 60

Query: 61  IQCVIYTS-DVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMI 120
           IQCV+YTS DVLLLSSLKLLRNLCAGEIRNQN+FIEQNGVGVVS++LQ+AM M DP+R+ 
Sbjct: 61  IQCVVYTSGDVLLLSSLKLLRNLCAGEIRNQNIFIEQNGVGVVSKVLQDAMVMNDPDRVT 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSEL 180
           IRLGLQVLANVSLAGE+HQQAI HGLFPDKFLLLAR+P  EISDPLSMI+YN+CS HSEL
Sbjct: 121 IRLGLQVLANVSLAGEKHQQAIWHGLFPDKFLLLARLPFCEISDPLSMILYNICSGHSEL 180

Query: 181 VASFCGDSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDS 240
           VAS CGD GLPIIEEIVRT SSVGFVEDWVKL+LSRICLEEPYFPMLFS+LRPI+TYKDS
Sbjct: 181 VASLCGDIGLPIIEEIVRTVSSVGFVEDWVKLLLSRICLEEPYFPMLFSQLRPIDTYKDS 240

Query: 241 NKAKCSNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPICK 300
           NKA+  ++SFSSEQAYLLT++SEILNEQIG+I VPKDFA CVYR FQSS+SIIDSTP+ K
Sbjct: 241 NKAESRDVSFSSEQAYLLTVVSEILNEQIGDIVVPKDFAMCVYRTFQSSISIIDSTPVSK 300

Query: 301 SGLPTGTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGILRDIE 360
             LPTGTIAGDVLGYSLTILRDICAQDS KGDKD+ EDAV+VLLSLGLIDLLL IL DIE
Sbjct: 301 CSLPTGTIAGDVLGYSLTILRDICAQDSSKGDKDIYEDAVDVLLSLGLIDLLLSILHDIE 360

Query: 361 PLAILKKALQQAEN-EDRTSLPNSLKSCPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNG 420
           P AILKKALQQ EN EDRTSLP +LKSCPYKGFRRDIVAVIANCLYRRKHVQDD+R+KNG
Sbjct: 361 PPAILKKALQQVENEEDRTSLPKALKSCPYKGFRRDIVAVIANCLYRRKHVQDDIRQKNG 420

Query: 421 VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRV 480
           VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLEN++LVSELEVQGSA VPEIAELGLRV
Sbjct: 421 VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENKRLVSELEVQGSAHVPEIAELGLRV 480

Query: 481 EVDPNTRRAKLVNASRPFQD 499
           EVDP TRRAKLVN+SRPFQD
Sbjct: 481 EVDPKTRRAKLVNSSRPFQD 500

[Close]

BLAST of Lsi05G000140 vs. ExPASy TrEMBL
Match: A0A0A0LFC4 (Atx10homo_assoc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G913990 PE=4 SV=1)

HSP 1 Score: 823.9 bits (2127), Expect = 3.5e-235
Identity = 431/500 (86.20%), Postives = 460/500 (92.00%), Query Frame = 0


Query: 1   MKNSSSFEQSIPERISQQLVIASNSCTLEASLETLIEASKSIEGRSNLASQNILPCVLEL 60
           MKNSS FE SIPERISQQL +AS+S TLEASLETLIEAS+S EGRSNLASQNILPCVLEL
Sbjct: 1   MKNSSPFELSIPERISQQLFLASSSNTLEASLETLIEASRSSEGRSNLASQNILPCVLEL 60

Query: 61  IQCVIYTS-DVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMI 120
           IQC+IYTS DVLLLSSLKLLRNLCAGEIRNQN+FIEQNGV VVS+ILQ+AM + DP+R+ 
Sbjct: 61  IQCLIYTSGDVLLLSSLKLLRNLCAGEIRNQNIFIEQNGVRVVSKILQDAMLINDPDRVT 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSEL 180
           IRLGLQVLANVSLAGEEHQQAI H LFPD FLLLAR+P  EISDPL MIIYNLCS HSEL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWHELFPDNFLLLARLPFCEISDPLCMIIYNLCSGHSEL 180

Query: 181 VASFCGDSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDS 240
           VAS CGD GLPIIEEIVRT SSVGFVEDWVKL+LSRICLEE YFPMLFS LRPI+TYKDS
Sbjct: 181 VASLCGDLGLPIIEEIVRTVSSVGFVEDWVKLLLSRICLEELYFPMLFSGLRPIDTYKDS 240

Query: 241 NKAKCSNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPICK 300
           N A+  +ISFSSEQAYLLT+ISEILNEQIG+I VPKDFA+CVYRIFQSS+SIIDSTP+ K
Sbjct: 241 NIAESRDISFSSEQAYLLTVISEILNEQIGDIVVPKDFASCVYRIFQSSISIIDSTPVSK 300

Query: 301 SGLPTGTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGILRDIE 360
           SGLPTG IAGDV+GYSLTILRDICAQDS KGDKDV EDAV+VLLSLGLIDLLL IL DIE
Sbjct: 301 SGLPTGRIAGDVVGYSLTILRDICAQDSNKGDKDVYEDAVDVLLSLGLIDLLLSILHDIE 360

Query: 361 PLAILKKALQQAEN-EDRTSLPNSLKSCPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNG 420
           P AILKKALQQ EN ED TSLPN++K CPYKGFRRDIVAVIANCLYRRKHVQDD+R+KNG
Sbjct: 361 PPAILKKALQQVENEEDGTSLPNAVKPCPYKGFRRDIVAVIANCLYRRKHVQDDIRQKNG 420

Query: 421 VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRV 480
           VFVLLQQCVAD+NNPFLREWGIWAVRNLLEGNLENQ+LVSELEVQGSA VPEIAELGLRV
Sbjct: 421 VFVLLQQCVADKNNPFLREWGIWAVRNLLEGNLENQRLVSELEVQGSAHVPEIAELGLRV 480

Query: 481 EVDPNTRRAKLVNASRPFQD 499
           EVD  TRRAKLVNASRPFQ+
Sbjct: 481 EVDAKTRRAKLVNASRPFQN 500

[Close]

BLAST of Lsi05G000140 vs. ExPASy TrEMBL
Match: A0A6J1G6J4 (ataxin-10 OS=Cucurbita moschata OX=3662 GN=LOC111451217 PE=4 SV=1)

HSP 1 Score: 772.7 bits (1994), Expect = 9.3e-220
Identity = 402/503 (79.92%), Postives = 447/503 (88.87%), Query Frame = 0


Query: 1   MKNSSSFEQSIPERISQQLVIASNSCTLEASLETLIEASKSIEGRSNLASQNILPCVLEL 60
           MKNS+SFEQSIPERI Q L+ ASNSCTLEASLE LIEASKS+EGRSN ASQNILPCVLEL
Sbjct: 1   MKNSASFEQSIPERIIQPLLSASNSCTLEASLEALIEASKSVEGRSNFASQNILPCVLEL 60

Query: 61  IQCVIYTS-DVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMI 120
           IQC+ YTS + L LSSL+LLRNLCAGEIRNQNVFIEQNGVGVV  ILQNAM + DP+R+I
Sbjct: 61  IQCLDYTSNNALQLSSLRLLRNLCAGEIRNQNVFIEQNGVGVVLSILQNAMLLFDPDRVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSEL 180
           IRLGLQVLANVSLAGEEHQQAI HGLFPDKF+ LARI + EISDPLSMI+YNLCS +SEL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWHGLFPDKFVSLARIRYCEISDPLSMILYNLCSTNSEL 180

Query: 181 VASFCGDSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDS 240
           VAS C D GLPI+EEI RT + VGF EDWVKL+LSRICLEEPYFP LFS LRPI+T KD 
Sbjct: 181 VASLCSDVGLPILEEITRTTTLVGFKEDWVKLLLSRICLEEPYFPRLFSALRPIDTSKDG 240

Query: 241 NKAKCSNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPICK 300
            K    ++SFSSEQA+LLTIISEILNE+IG+I++PKDFA+C++RIFQSS+ II STPIC+
Sbjct: 241 GK----DMSFSSEQAFLLTIISEILNERIGDISIPKDFASCIHRIFQSSIPIISSTPICE 300

Query: 301 SGLPTGTIAGDVLGYSLTILRDICAQDSKK--GDKDVSEDAVNVLLSLGLIDLLLGILRD 360
             LPTGT A DVLGYSL ILRDICAQ+  K  G KDVS+DAV+VLLSLGLIDLLLGILRD
Sbjct: 301 RSLPTGTTAVDVLGYSLNILRDICAQEDGKEGGHKDVSKDAVDVLLSLGLIDLLLGILRD 360

Query: 361 IEPLAILKKALQQAENEDRTSLPNSLKS--CPYKGFRRDIVAVIANCLYRRKHVQDDVRK 420
           IEP AI+KKA+QQAENE+RT LPN+ KS  CPYKGFRRDIVAVIANCLYR+KHVQDD+RK
Sbjct: 361 IEPPAIVKKAIQQAENENRTDLPNTSKSCPCPYKGFRRDIVAVIANCLYRKKHVQDDIRK 420

Query: 421 KNGVFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELG 480
           KNGVFVLLQQCV DENNPFLREWGIWAVRNLLEGNLEN+KLV+ELEVQG  ++PEIAELG
Sbjct: 421 KNGVFVLLQQCVVDENNPFLREWGIWAVRNLLEGNLENKKLVAELEVQGPVNMPEIAELG 480

Query: 481 LRVEVDPNTRRAKLVNASRPFQD 499
           L+VEVDP T+ AKLVNASRPF+D
Sbjct: 481 LQVEVDPKTKAAKLVNASRPFKD 499

[Close]

BLAST of Lsi05G000140 vs. ExPASy TrEMBL
Match: A0A6J1BXT4 (ataxin-10 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006446 PE=4 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 3.7e-216
Identity = 399/494 (80.77%), Postives = 437/494 (88.46%), Query Frame = 0


Query: 1   MKNSSSFEQSIPERISQQLVIASNSCTLEASLETLIEASKSIEGRSNLASQNILPCVLEL 60
           MKN S  EQSIPERI QQL+ A+ S TLEASL+ LIEASKS EGRS+LASQNILP VLEL
Sbjct: 1   MKNPSLSEQSIPERIIQQLLSAAKSFTLEASLDILIEASKSTEGRSDLASQNILPSVLEL 60

Query: 61  IQCVIYTSD-VLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMI 120
           IQ +I TS   LLLSSLKLLRNLCAGEIRNQNVFIEQ+GVGVVS ILQ AM MCDP+ +I
Sbjct: 61  IQRLIDTSSGALLLSSLKLLRNLCAGEIRNQNVFIEQSGVGVVSSILQYAMLMCDPDIVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSEL 180
           IRLGLQVLANVSLAGEEHQQAI   LFPD F+LLARI + EISDPLSMIIYNLCSRH EL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWRELFPDNFVLLARIRYCEISDPLSMIIYNLCSRHYEL 180

Query: 181 VASFCGDSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDS 240
           VA  CGDSGLPII EI RTASSVGF EDWVKL+LSRICLEEPYFP+LFSKL P++  KD 
Sbjct: 181 VALLCGDSGLPIIVEITRTASSVGFGEDWVKLLLSRICLEEPYFPLLFSKLCPVDNSKDG 240

Query: 241 NKAKCSNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPICK 300
            K +  ++SFSSEQA+LLTIISEILNE+IG+I VP DFA+CV+RIFQSS+SIID TPICK
Sbjct: 241 EKVESEDVSFSSEQAFLLTIISEILNERIGDITVPNDFASCVFRIFQSSLSIIDFTPICK 300

Query: 301 SGLPTGTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGILRDIE 360
             LPTGT A DVLGYSL ILRDICAQD +   KD+SEDAV+VLLSLGL+DLLLG+LR++E
Sbjct: 301 CSLPTGTTAVDVLGYSLAILRDICAQDGR--HKDISEDAVDVLLSLGLLDLLLGLLRNVE 360

Query: 361 PLAILKKALQQAENEDRTSLPNSLKSCPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNGV 420
           P A++KKALQQAENEDR+S PNSLK CPYKGFRRDIVAVIANC YRRKHVQDD+RKKNGV
Sbjct: 361 PPAMIKKALQQAENEDRSSRPNSLKRCPYKGFRRDIVAVIANCSYRRKHVQDDIRKKNGV 420

Query: 421 FVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRVE 480
           FVLLQQCVADENNPFLREWGIWA+RNLLEGNLENQKLV+ELEVQGS DVPEIAELGL++E
Sbjct: 421 FVLLQQCVADENNPFLREWGIWAMRNLLEGNLENQKLVAELEVQGSVDVPEIAELGLQIE 480

Query: 481 VDPNTRRAKLVNAS 494
           VDP TRRAKLVNAS
Sbjct: 481 VDPKTRRAKLVNAS 492

[Close]

BLAST of Lsi05G000140 vs. NCBI nr
Match: XP_038888252.1 (ataxin-10 [Benincasa hispida] >XP_038888253.1 ataxin-10 [Benincasa hispida])

HSP 1 Score: 879.4 bits (2271), Expect = 1.5e-251
Identity = 453/499 (90.78%), Postives = 474/499 (94.99%), Query Frame = 0


Query: 1   MKNSSSFEQSIPERISQQLVIASNSCTLEASLETLIEASKSIEGRSNLASQNILPCVLEL 60
           MKNS S EQSIPERI+Q+L IASNSCTLEASLETLIEASKSIEGRSNLASQ+ILPCVLEL
Sbjct: 1   MKNSPSLEQSIPERITQRLFIASNSCTLEASLETLIEASKSIEGRSNLASQDILPCVLEL 60

Query: 61  IQCVIYTS-DVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMI 120
           IQCVI  S DVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSR+LQ+AM M DP+ +I
Sbjct: 61  IQCVINISGDVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRVLQDAMLMNDPDHVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSEL 180
           IRLGLQVLANVSLAGEEHQQAI H LFPDKFLLL+RI + EISDPLSMIIYN+CSRHSEL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWHRLFPDKFLLLSRITYHEISDPLSMIIYNICSRHSEL 180

Query: 181 VASFCGDSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDS 240
           VAS CGDSGLPIIEEIVRT SSVGFVEDWVKL+LSRICLEEPYFP LFSKLRPI+TYKDS
Sbjct: 181 VASLCGDSGLPIIEEIVRTVSSVGFVEDWVKLLLSRICLEEPYFPRLFSKLRPIDTYKDS 240

Query: 241 NKAKCSNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPICK 300
           NKA+  ++SFSSEQAYLLTIISEILNEQIG+I VPKDFA CVYRIFQSS+SIIDSTPICK
Sbjct: 241 NKAEYRDVSFSSEQAYLLTIISEILNEQIGDIVVPKDFAACVYRIFQSSISIIDSTPICK 300

Query: 301 SGLPTGTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGILRDIE 360
           SGLPTGTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAV+VLLSLGLIDLLLGIL DIE
Sbjct: 301 SGLPTGTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVDVLLSLGLIDLLLGILHDIE 360

Query: 361 PLAILKKALQQAENEDRTSLPNSLKSCPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNGV 420
           P A+LKKALQQ ENEDRTSLPNSLK+CPYKGFRRDIVAVIANCLYRRKHVQDD+RKKNGV
Sbjct: 361 PPAVLKKALQQGENEDRTSLPNSLKACPYKGFRRDIVAVIANCLYRRKHVQDDIRKKNGV 420

Query: 421 FVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRVE 480
           FVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRVE
Sbjct: 421 FVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRVE 480

Query: 481 VDPNTRRAKLVNASRPFQD 499
           VDP TRRAKLVNA RPFQD
Sbjct: 481 VDPKTRRAKLVNAPRPFQD 499

[Close]

BLAST of Lsi05G000140 vs. NCBI nr
Match: XP_008465880.1 (PREDICTED: ataxin-10 [Cucumis melo] >KAA0038498.1 ataxin-10 [Cucumis melo var. makuwa] >TYK31092.1 ataxin-10 [Cucumis melo var. makuwa])

HSP 1 Score: 840.5 bits (2170), Expect = 7.5e-240
Identity = 432/500 (86.40%), Postives = 464/500 (92.80%), Query Frame = 0


Query: 1   MKNSSSFEQSIPERISQQLVIASNSCTLEASLETLIEASKSIEGRSNLASQNILPCVLEL 60
           MKNSS FE SIP+RI Q L +ASNS TLEASLETLIEASKS EGRSNLASQNILPCVLEL
Sbjct: 1   MKNSSPFELSIPKRIIQPLFLASNSNTLEASLETLIEASKSSEGRSNLASQNILPCVLEL 60

Query: 61  IQCVIYTS-DVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMI 120
           IQCV+YTS DVLLLSSLKLLRNLCAGEIRNQN+FIEQNGVGVVS++LQ+AM M DP+R+ 
Sbjct: 61  IQCVVYTSGDVLLLSSLKLLRNLCAGEIRNQNIFIEQNGVGVVSKVLQDAMVMNDPDRVT 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSEL 180
           IRLGLQVLANVSLAGE+HQQAI HGLFPDKFLLLAR+P  EISDPLSMI+YN+CS HSEL
Sbjct: 121 IRLGLQVLANVSLAGEKHQQAIWHGLFPDKFLLLARLPFCEISDPLSMILYNICSGHSEL 180

Query: 181 VASFCGDSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDS 240
           VAS CGD GLPIIEEIVRT SSVGFVEDWVKL+LSRICLEEPYFPMLFS+LRPI+TYKDS
Sbjct: 181 VASLCGDIGLPIIEEIVRTVSSVGFVEDWVKLLLSRICLEEPYFPMLFSQLRPIDTYKDS 240

Query: 241 NKAKCSNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPICK 300
           NKA+  ++SFSSEQAYLLT++SEILNEQIG+I VPKDFA CVYR FQSS+SIIDSTP+ K
Sbjct: 241 NKAESRDVSFSSEQAYLLTVVSEILNEQIGDIVVPKDFAMCVYRTFQSSISIIDSTPVSK 300

Query: 301 SGLPTGTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGILRDIE 360
             LPTGTIAGDVLGYSLTILRDICAQDS KGDKD+ EDAV+VLLSLGLIDLLL IL DIE
Sbjct: 301 CSLPTGTIAGDVLGYSLTILRDICAQDSSKGDKDIYEDAVDVLLSLGLIDLLLSILHDIE 360

Query: 361 PLAILKKALQQAEN-EDRTSLPNSLKSCPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNG 420
           P AILKKALQQ EN EDRTSLP +LKSCPYKGFRRDIVAVIANCLYRRKHVQDD+R+KNG
Sbjct: 361 PPAILKKALQQVENEEDRTSLPKALKSCPYKGFRRDIVAVIANCLYRRKHVQDDIRQKNG 420

Query: 421 VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRV 480
           VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLEN++LVSELEVQGSA VPEIAELGLRV
Sbjct: 421 VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENKRLVSELEVQGSAHVPEIAELGLRV 480

Query: 481 EVDPNTRRAKLVNASRPFQD 499
           EVDP TRRAKLVN+SRPFQD
Sbjct: 481 EVDPKTRRAKLVNSSRPFQD 500

[Close]

BLAST of Lsi05G000140 vs. NCBI nr
Match: XP_011652695.1 (ataxin-10 homolog [Cucumis sativus])

HSP 1 Score: 823.9 bits (2127), Expect = 7.3e-235
Identity = 431/500 (86.20%), Postives = 460/500 (92.00%), Query Frame = 0


Query: 1   MKNSSSFEQSIPERISQQLVIASNSCTLEASLETLIEASKSIEGRSNLASQNILPCVLEL 60
           MKNSS FE SIPERISQQL +AS+S TLEASLETLIEAS+S EGRSNLASQNILPCVLEL
Sbjct: 1   MKNSSPFELSIPERISQQLFLASSSNTLEASLETLIEASRSSEGRSNLASQNILPCVLEL 60

Query: 61  IQCVIYTS-DVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMI 120
           IQC+IYTS DVLLLSSLKLLRNLCAGEIRNQN+FIEQNGV VVS+ILQ+AM + DP+R+ 
Sbjct: 61  IQCLIYTSGDVLLLSSLKLLRNLCAGEIRNQNIFIEQNGVRVVSKILQDAMLINDPDRVT 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSEL 180
           IRLGLQVLANVSLAGEEHQQAI H LFPD FLLLAR+P  EISDPL MIIYNLCS HSEL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWHELFPDNFLLLARLPFCEISDPLCMIIYNLCSGHSEL 180

Query: 181 VASFCGDSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDS 240
           VAS CGD GLPIIEEIVRT SSVGFVEDWVKL+LSRICLEE YFPMLFS LRPI+TYKDS
Sbjct: 181 VASLCGDLGLPIIEEIVRTVSSVGFVEDWVKLLLSRICLEELYFPMLFSGLRPIDTYKDS 240

Query: 241 NKAKCSNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPICK 300
           N A+  +ISFSSEQAYLLT+ISEILNEQIG+I VPKDFA+CVYRIFQSS+SIIDSTP+ K
Sbjct: 241 NIAESRDISFSSEQAYLLTVISEILNEQIGDIVVPKDFASCVYRIFQSSISIIDSTPVSK 300

Query: 301 SGLPTGTIAGDVLGYSLTILRDICAQDSKKGDKDVSEDAVNVLLSLGLIDLLLGILRDIE 360
           SGLPTG IAGDV+GYSLTILRDICAQDS KGDKDV EDAV+VLLSLGLIDLLL IL DIE
Sbjct: 301 SGLPTGRIAGDVVGYSLTILRDICAQDSNKGDKDVYEDAVDVLLSLGLIDLLLSILHDIE 360

Query: 361 PLAILKKALQQAEN-EDRTSLPNSLKSCPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNG 420
           P AILKKALQQ EN ED TSLPN++K CPYKGFRRDIVAVIANCLYRRKHVQDD+R+KNG
Sbjct: 361 PPAILKKALQQVENEEDGTSLPNAVKPCPYKGFRRDIVAVIANCLYRRKHVQDDIRQKNG 420

Query: 421 VFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRV 480
           VFVLLQQCVAD+NNPFLREWGIWAVRNLLEGNLENQ+LVSELEVQGSA VPEIAELGLRV
Sbjct: 421 VFVLLQQCVADKNNPFLREWGIWAVRNLLEGNLENQRLVSELEVQGSAHVPEIAELGLRV 480

Query: 481 EVDPNTRRAKLVNASRPFQD 499
           EVD  TRRAKLVNASRPFQ+
Sbjct: 481 EVDAKTRRAKLVNASRPFQN 500

[Close]

BLAST of Lsi05G000140 vs. NCBI nr
Match: XP_022947319.1 (ataxin-10 [Cucurbita moschata] >XP_022947320.1 ataxin-10 [Cucurbita moschata] >KAG7035150.1 Ataxin-10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 772.7 bits (1994), Expect = 1.9e-219
Identity = 402/503 (79.92%), Postives = 447/503 (88.87%), Query Frame = 0


Query: 1   MKNSSSFEQSIPERISQQLVIASNSCTLEASLETLIEASKSIEGRSNLASQNILPCVLEL 60
           MKNS+SFEQSIPERI Q L+ ASNSCTLEASLE LIEASKS+EGRSN ASQNILPCVLEL
Sbjct: 1   MKNSASFEQSIPERIIQPLLSASNSCTLEASLEALIEASKSVEGRSNFASQNILPCVLEL 60

Query: 61  IQCVIYTS-DVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMI 120
           IQC+ YTS + L LSSL+LLRNLCAGEIRNQNVFIEQNGVGVV  ILQNAM + DP+R+I
Sbjct: 61  IQCLDYTSNNALQLSSLRLLRNLCAGEIRNQNVFIEQNGVGVVLSILQNAMLLFDPDRVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSEL 180
           IRLGLQVLANVSLAGEEHQQAI HGLFPDKF+ LARI + EISDPLSMI+YNLCS +SEL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWHGLFPDKFVSLARIRYCEISDPLSMILYNLCSTNSEL 180

Query: 181 VASFCGDSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDS 240
           VAS C D GLPI+EEI RT + VGF EDWVKL+LSRICLEEPYFP LFS LRPI+T KD 
Sbjct: 181 VASLCSDVGLPILEEITRTTTLVGFKEDWVKLLLSRICLEEPYFPRLFSALRPIDTSKDG 240

Query: 241 NKAKCSNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPICK 300
            K    ++SFSSEQA+LLTIISEILNE+IG+I++PKDFA+C++RIFQSS+ II STPIC+
Sbjct: 241 GK----DMSFSSEQAFLLTIISEILNERIGDISIPKDFASCIHRIFQSSIPIISSTPICE 300

Query: 301 SGLPTGTIAGDVLGYSLTILRDICAQDSKK--GDKDVSEDAVNVLLSLGLIDLLLGILRD 360
             LPTGT A DVLGYSL ILRDICAQ+  K  G KDVS+DAV+VLLSLGLIDLLLGILRD
Sbjct: 301 RSLPTGTTAVDVLGYSLNILRDICAQEDGKEGGHKDVSKDAVDVLLSLGLIDLLLGILRD 360

Query: 361 IEPLAILKKALQQAENEDRTSLPNSLKS--CPYKGFRRDIVAVIANCLYRRKHVQDDVRK 420
           IEP AI+KKA+QQAENE+RT LPN+ KS  CPYKGFRRDIVAVIANCLYR+KHVQDD+RK
Sbjct: 361 IEPPAIVKKAIQQAENENRTDLPNTSKSCPCPYKGFRRDIVAVIANCLYRKKHVQDDIRK 420

Query: 421 KNGVFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELG 480
           KNGVFVLLQQCV DENNPFLREWGIWAVRNLLEGNLEN+KLV+ELEVQG  ++PEIAELG
Sbjct: 421 KNGVFVLLQQCVVDENNPFLREWGIWAVRNLLEGNLENKKLVAELEVQGPVNMPEIAELG 480

Query: 481 LRVEVDPNTRRAKLVNASRPFQD 499
           L+VEVDP T+ AKLVNASRPF+D
Sbjct: 481 LQVEVDPKTKAAKLVNASRPFKD 499

[Close]

BLAST of Lsi05G000140 vs. NCBI nr
Match: XP_023534595.1 (ataxin-10 [Cucurbita pepo subsp. pepo] >XP_023534596.1 ataxin-10 [Cucurbita pepo subsp. pepo] >XP_023534597.1 ataxin-10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 765.4 bits (1975), Expect = 3.1e-217
Identity = 400/503 (79.52%), Postives = 448/503 (89.07%), Query Frame = 0


Query: 1   MKNSSSFEQSIPERISQQLVIASNSCTLEASLETLIEASKSIEGRSNLASQNILPCVLEL 60
           MKNS+SFEQSIPERI+Q L  ASNSCTLE SLETLIEASKS+EGRSN ASQNILPCVLEL
Sbjct: 1   MKNSASFEQSIPERITQPLFSASNSCTLETSLETLIEASKSVEGRSNFASQNILPCVLEL 60

Query: 61  IQCVIYTS-DVLLLSSLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMI 120
           IQC+ YTS + L LS+L+LLRNLCAGEIRNQNVFIEQNGVGVVS ILQNAM + DP+R+I
Sbjct: 61  IQCLDYTSNNALQLSALRLLRNLCAGEIRNQNVFIEQNGVGVVSSILQNAMLLFDPDRVI 120

Query: 121 IRLGLQVLANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSEL 180
           IRLGLQVLANVSLAGEEHQQAI  GLFPDKF+ LARI + EISDPLSMI+YNL S ++EL
Sbjct: 121 IRLGLQVLANVSLAGEEHQQAIWRGLFPDKFVSLARIRYCEISDPLSMILYNLYSTNTEL 180

Query: 181 VASFCGDSGLPIIEEIVRTASSVGFVEDWVKLILSRICLEEPYFPMLFSKLRPIETYKDS 240
           VAS C D GLPIIEEI RT S VGF EDWVKL+LSRICLEEPYFP LFS LRPI++ KD 
Sbjct: 181 VASLCSDVGLPIIEEITRTTSLVGFKEDWVKLLLSRICLEEPYFPRLFSALRPIDSSKDG 240

Query: 241 NKAKCSNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPICK 300
            +    ++SFSSEQA+LLTIISEILNE+IG+I++PKDFA+C++RIFQSS+ II STPIC+
Sbjct: 241 GE----DMSFSSEQAFLLTIISEILNERIGDISIPKDFASCIHRIFQSSIPIISSTPICE 300

Query: 301 SGLPTGTIAGDVLGYSLTILRDICAQ-DSKKGD-KDVSEDAVNVLLSLGLIDLLLGILRD 360
             LPTGT A DVLGYSL ILRDICAQ D K+G+ KDVSEDAV+VLLSLGLIDLLLGILRD
Sbjct: 301 RSLPTGTTAVDVLGYSLNILRDICAQDDGKEGERKDVSEDAVDVLLSLGLIDLLLGILRD 360

Query: 361 IEPLAILKKALQQAENEDRTSLPNSLKS--CPYKGFRRDIVAVIANCLYRRKHVQDDVRK 420
           IEP AI+KKA+QQAENE+RT LPN+ KS  CPYKGFRRDIVAVIANCLYR+KHVQDD+RK
Sbjct: 361 IEPPAIVKKAIQQAENENRTDLPNTSKSCPCPYKGFRRDIVAVIANCLYRKKHVQDDIRK 420

Query: 421 KNGVFVLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELG 480
           KNGVFVLLQQCV DENNPFLREWGIWAVRNLLEGN+EN+KLV+ELEVQG  ++PEIAELG
Sbjct: 421 KNGVFVLLQQCVVDENNPFLREWGIWAVRNLLEGNMENKKLVAELEVQGPVNMPEIAELG 480

Query: 481 LRVEVDPNTRRAKLVNASRPFQD 499
           L+VEVDP T+ AKLVNASRPF+D
Sbjct: 481 LQVEVDPKTKAAKLVNASRPFKD 499

[Close]

BLAST of Lsi05G000140 vs. TAIR 10
Match: AT4G00231.1 (ARM repeat superfamily protein )

HSP 1 Score: 451.8 bits (1161), Expect = 7.0e-127
Identity = 247/491 (50.31%), Postives = 346/491 (70.47%), Query Frame = 0


Query: 8   EQSIPERISQQLVIASN-SCTLEASLETLIEASKSIEGRSNLASQNILPCVLELIQCVIY 67
           E S+PE + Q L+ AS+ S +LE  L+ L+E+SK+  GRS+LAS++ILP +L L+Q + Y
Sbjct: 2   EASLPEEVLQPLLHASDLSYSLEDCLKFLLESSKTDSGRSDLASKSILPSILRLLQLLPY 61

Query: 68  TSDVLLLS-SLKLLRNLCAGEIRNQNVFIEQNGVGVVSRILQNAMQMCDPNRMIIRLGLQ 127
            S    L+ SLK+LRNLCAGE+ NQN F++ +G  +VS +L +A+   +     +R GLQ
Sbjct: 62  PSSRHYLNLSLKVLRNLCAGEVSNQNSFVDHDGSAIVSDLLDSAIADFE----TVRFGLQ 121

Query: 128 VLANVSLAGEEHQQAIRHGLFPDKFLLLARIPHREISDPLSMIIYNLCSRHSELVASFCG 187
           VLANV L GE+ Q+ +    +P++FL +A+I  RE  DPL MI+Y      SE+ +  C 
Sbjct: 122 VLANVVLFGEKRQRDVWLRFYPERFLSIAKIRKRETFDPLCMILYTCVDGSSEIASELCS 181

Query: 188 DSGLPIIEEIVRTASSVGFVED-WVKLILSRICLEEPYFPMLFSKLRPIETYKDSNKAKC 247
             GL II E +RT+SSVG VED W+KL++SRIC+E+ YF  LFSKL     Y+D+     
Sbjct: 182 CQGLTIIAETLRTSSSVGSVEDYWLKLLVSRICVEDGYFLKLFSKL-----YEDA----- 241

Query: 248 SNISFSSEQAYLLTIISEILNEQIGNIAVPKDFATCVYRIFQSSVSIIDSTPICKSGLPT 307
            N  FSSEQA+L+ ++S+I NE+IG +++PKD A  +  +F+ SV + D     +S LPT
Sbjct: 242 ENEIFSSEQAFLVRMVSDIANERIGKVSIPKDTACSILGLFRQSVDVFDFVSGERSELPT 301

Query: 308 GTIAGDVLGYSLTILRDICA----QDSKKGDKDVSEDAVNVLLSLGLIDLLLGILRDIEP 367
           G+   DV+GYSL I+RD CA    ++ K+ +KD S D V +LLS GLI+LLL +L  ++P
Sbjct: 302 GSTIVDVMGYSLVIIRDACAGGRLEELKEDNKD-SGDTVELLLSSGLIELLLDLLSKLDP 361

Query: 368 LAILKKALQQAENEDRTSLPNSLKSCPYKGFRRDIVAVIANCLYRRKHVQDDVRKKNGVF 427
              +KKAL    N+  +S  +SLK CPY+GFRRDIV+VI NC YRRK VQD++R+++G+F
Sbjct: 362 PTTIKKAL----NQSPSSSSSSLKPCPYRGFRRDIVSVIGNCAYRRKEVQDEIRERDGLF 421

Query: 428 VLLQQCVADENNPFLREWGIWAVRNLLEGNLENQKLVSELEVQGSADVPEIAELGLRVEV 487
           ++LQQCV D+ NPFLREWG+W +RNLLEGN ENQ++V+ELE++GS DVP++ E+GLRVE+
Sbjct: 422 LMLQQCVTDDENPFLREWGLWCIRNLLEGNPENQEVVAELEIKGSVDVPQLREIGLRVEI 473

Query: 488 DPNTRRAKLVN 492
           DP T R KLVN
Sbjct: 482 DPKTARPKLVN 473

The following BLAST results are available for this feature:

BLAST of Lsi05G000140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2TBW0	7.8e-22	26.67	Ataxin-10 OS=Bos taurus OX=9913 GN=ATXN10 PE=2 SV=1	[more]
Q5FVB0	8.0e-19	24.94	Ataxin-10 OS=Xenopus tropicalis OX=8364 GN=atxn10 PE=2 SV=1	[more]
Q4R4Y2	1.8e-18	23.63	Ataxin-10 OS=Macaca fascicularis OX=9541 GN=ATXN10 PE=2 SV=1	[more]
P28658	1.8e-18	24.23	Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=1 SV=2	[more]
Q9UBB4	3.1e-18	24.24	Ataxin-10 OS=Homo sapiens OX=9606 GN=ATXN10 PE=1 SV=1	[more]

BLAST of Lsi05G000140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6L8	3.6e-240	86.40	Ataxin-10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003690 PE=...	[more]
A0A1S3CPV9	3.6e-240	86.40	ataxin-10 OS=Cucumis melo OX=3656 GN=LOC103503465 PE=4 SV=1	[more]
A0A0A0LFC4	3.5e-235	86.20	Atx10homo_assoc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G91...	[more]
A0A6J1G6J4	9.3e-220	79.92	ataxin-10 OS=Cucurbita moschata OX=3662 GN=LOC111451217 PE=4 SV=1	[more]
A0A6J1BXT4	3.7e-216	80.77	ataxin-10 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006446 PE=4 SV=1	[more]

BLAST of Lsi05G000140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888252.1	1.5e-251	90.78	ataxin-10 [Benincasa hispida] >XP_038888253.1 ataxin-10 [Benincasa hispida]	[more]
XP_008465880.1	7.5e-240	86.40	PREDICTED: ataxin-10 [Cucumis melo] >KAA0038498.1 ataxin-10 [Cucumis melo var. m...	[more]
XP_011652695.1	7.3e-235	86.20	ataxin-10 homolog [Cucumis sativus]	[more]
XP_022947319.1	1.9e-219	79.92	ataxin-10 [Cucurbita moschata] >XP_022947320.1 ataxin-10 [Cucurbita moschata] >K...	[more]
XP_023534595.1	3.1e-217	79.52	ataxin-10 [Cucurbita pepo subsp. pepo] >XP_023534596.1 ataxin-10 [Cucurbita pepo...	[more]

BLAST of Lsi05G000140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00231.1	7.0e-127	50.31	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 246..471 e-value: 3.0E-7 score: 31.5
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 7..245 e-value: 1.3E-12 score: 49.0
IPR019156	Ataxin-10 domain	PFAM	PF09759	Atx10homo_assoc	coord: 391..484 e-value: 1.4E-33 score: 114.8
None	No IPR available	PANTHER	PTHR13255	ATAXIN-10	coord: 7..492
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 23..455

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G000140.1	Lsi05G000140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
cellular_component	GO:0005829	cytosol