Lsi04G023190 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G023190
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Profilin
Location	chr04: 30391453 .. 30393225 (+)
RNA-Seq Expression	Lsi04G023190
Synteny	Lsi04G023190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAATTTCTCCAAAGAGGTGTGTCAGCACATGGAGAAGAGAATCTATGGACGCATGCAAATCGGAGAAACCCATTTGGCCGCTCTCTGTTTCATCACCGACTGGTTGGTTTAGCGCCCGAAGCAGCTTCTCAACAAAAACCAGTGAGCTTAATCGGTTCAAGGGGATCAAGAAGAAGATGTCGTGGCAACAGTACGTGGATGAGCACTTGATGTGCGACATTGAAGGCAACCGTCTCTCTGCTGCTGCGATCATTGGCCAAGACGGTACTGTTTGGGCTCAGAGCTCCAATTTTCCTCAGGTTTAATCCTTCTTCTTCTGGAACTTCTTCTCTCTGTTGTTTTGGATCTTGTTTTATCTAGTCTCGATTAGTTCAGCATTTTGCATGAATTAATTTGTTCCGTAGGCACAGAGCAAGTACTATTATCGTTGTATTACGTTGATGATGTGATGAGGCTAGGCGAATACTGTTTGTGTACTATTGATTGCTTTGAGGCGAATACTGTTTGTGTACTATTGATTGCTGTGTTTTGATCTTTGTTTATACAGAATGAAATAGAGCTTTTTAAGACCATTTTTTGATTGTTTATGTGTTGCTGATGGGAGCGATTTCTCTGTTTATGGGGTTTCGTATTCACCTTGAACAGATGAGTTTACTTGTGGCATATGAGTTGTTGTTCTATAGATTTATTGCGGCACTACTTCGTTTGCTAGGTTTTCTTTTCCCCTTTTCAATTTAACCGACCTTTCTTACTTTCTTTACATTCTTCTGGTCTTTGTTTATTCGTTTATTTCTGCGATAGTTGAAGCCAGAAGAGTTAACAGCCATTATGAATGATTTTGCGCAACCTGAATCACTTGCCCCAACTGGTTTGTTCCATGGTGGCACTAAGTACATGGTTATTCAAGGTGAACCAGGTGCTGTCATAAGAGGAAAAAAGGTGATTACTTCACAAATTCTAGTTTTTCTACTTGAAACAATTAGCATATTAATACTATATCTTACTAGAAAAGTCGAACTTTTGGTTGTTTCTGGTTTTCTGATAGATGGTAAAGAACTAAAAAATCATTAAACTCACAACATTAGAAAAGCTATTGTACCATGAAATTACTATCTGTTTAGAATGACTTAGTGGTTAAATAAGTCATTCCAAGCAGACCTTTAGTTTTCATGCAACTTCTGAATACTTGACCAGCAGCAGCCAAGTTCTCTTCAGATGATTCTTTAAATAAGCGTTTTTAAGCACTTATAAAGTCATTCCAAGCAGACCCCTTCTAAATACTTGACCAAAACCAAGTTCTCTTCAGATGATTTTCTTTCCCGTCACAAAACTTGTCATAGTATCCATTATGTACTTCGAGTGTAAGCACTTAATGCATATACATTCATTGCCTCATTGACTTGAATGAATCAGGGTGGTGGCGGGATTACTATTAAGAAAACTAATCTGGGTTTGATCATTGGTATTTATGATGAGCCTGTAACTCCTGGTCAGTGCAACATGATCGTTGAAAGGCTAGGCGATTACCTGATTGAGCACGGACTGTAGTTGCTTTTATAGTAAGTGATCTGCTGATTTTGTTGGGGTATTTCTTGTGTATCTTTTACTGCGAGCATAGGATTTGCCTAATGAGTATATGATCCTTAGAAAGCTGCCAGAATTTGTAAAAACTATACTGGATGCTTTTGGAAATTGGTGCTCCATGTAATTATTACTATCAGATTTTGGACTATCAGGTCTGCTAATGTATATGGTGAGGACTTTGGTTGCC

mRNA sequence

CATAATTTCTCCAAAGAGGTGTGTCAGCACATGGAGAAGAGAATCTATGGACGCATGCAAATCGGAGAAACCCATTTGGCCGCTCTCTGTTTCATCACCGACTGGTTGGTTTAGCGCCCGAAGCAGCTTCTCAACAAAAACCAGTGAGCTTAATCGGTTCAAGGGGATCAAGAAGAAGATGTCGTGGCAACAGTACGTGGATGAGCACTTGATGTGCGACATTGAAGGCAACCGTCTCTCTGCTGCTGCGATCATTGGCCAAGACGGTACTGTTTGGGCTCAGAGCTCCAATTTTCCTCAGTTGAAGCCAGAAGAGTTAACAGCCATTATGAATGATTTTGCGCAACCTGAATCACTTGCCCCAACTGGTTTGTTCCATGGTGGCACTAAGTACATGGTTATTCAAGGTGAACCAGGTGCTGTCATAAGAGGAAAAAAGGGTGGTGGCGGGATTACTATTAAGAAAACTAATCTGGGTTTGATCATTGGTATTTATGATGAGCCTGTAACTCCTGGTCAGTGCAACATGATCGTTGAAAGGCTAGGCGATTACCTGATTGAGCACGGACTGTAGTTGCTTTTATAGTAAGTGATCTGCTGATTTTGTTGGGGTATTTCTTGTGTATCTTTTACTGCGAGCATAGGATTTGCCTAATGAGTATATGATCCTTAGAAAGCTGCCAGAATTTGTAAAAACTATACTGGATGCTTTTGGAAATTGGTGCTCCATGTAATTATTACTATCAGATTTTGGACTATCAGGTCTGCTAATGTATATGGTGAGGACTTTGGTTGCC

Coding sequence (CDS)

ATGGACGCATGCAAATCGGAGAAACCCATTTGGCCGCTCTCTGTTTCATCACCGACTGGTTGGTTTAGCGCCCGAAGCAGCTTCTCAACAAAAACCAGTGAGCTTAATCGGTTCAAGGGGATCAAGAAGAAGATGTCGTGGCAACAGTACGTGGATGAGCACTTGATGTGCGACATTGAAGGCAACCGTCTCTCTGCTGCTGCGATCATTGGCCAAGACGGTACTGTTTGGGCTCAGAGCTCCAATTTTCCTCAGTTGAAGCCAGAAGAGTTAACAGCCATTATGAATGATTTTGCGCAACCTGAATCACTTGCCCCAACTGGTTTGTTCCATGGTGGCACTAAGTACATGGTTATTCAAGGTGAACCAGGTGCTGTCATAAGAGGAAAAAAGGGTGGTGGCGGGATTACTATTAAGAAAACTAATCTGGGTTTGATCATTGGTATTTATGATGAGCCTGTAACTCCTGGTCAGTGCAACATGATCGTTGAAAGGCTAGGCGATTACCTGATTGAGCACGGACTGTAG

Protein sequence

MDACKSEKPIWPLSVSSPTGWFSARSSFSTKTSELNRFKGIKKKMSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESLAPTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVERLGDYLIEHGL

Homology

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BLAST of Lsi04G023190 vs. ExPASy Swiss-Prot
Match: Q93YI9 (Profilin OS=Capsicum annuum OX=4072 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-60
Identity = 108/131 (82.44%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMC+IEGNRL++AAIIGQDG+VWAQS+ FPQ KPEE+TAIMNDFA+P +L
Sbjct: 1   MSWQTYVDDHLMCEIEGNRLTSAAIIGQDGSVWAQSATFPQFKPEEITAIMNDFAEPGTL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+ GGTKYMVIQGE GAVIRGKKG GGIT+KKTN  LIIGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEAGAVIRGKKGPGGITVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLIE  L
Sbjct: 121 RLGDYLIEQSL 131

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BLAST of Lsi04G023190 vs. ExPASy Swiss-Prot
Match: O82572 (Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.9e-60
Identity = 107/131 (81.68%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMC+IEGN L++AAIIGQDG+VWAQSS FPQ KPEE+TAIMNDF +P SL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+  GTKYMVIQGEPGAVIRGKKG GG+T+KKTN  LIIGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLI+ GL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lsi04G023190 vs. ExPASy Swiss-Prot
Match: Q8GT39 (Profilin OS=Prunus persica OX=3760 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.6e-60
Identity = 105/131 (80.15%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMC+IEGN LSAAAIIG DG+VWAQS+ FPQLKPEE+T I+NDF +P SL
Sbjct: 1   MSWQAYVDDHLMCEIEGNHLSAAAIIGHDGSVWAQSATFPQLKPEEVTGILNDFNEPGSL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KK+ L L+IGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKSTLALLIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYL+E GL
Sbjct: 121 RLGDYLVEQGL 131

[Close]

BLAST of Lsi04G023190 vs. ExPASy Swiss-Prot
Match: P0C0Y3 (Profilin OS=Fragaria ananassa OX=3747 PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 7.4e-60
Identity = 105/131 (80.15%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMC+IEGN LSAAAIIGQDG+VWAQS+ FPQLKPEE+T I+ DF +P +L
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLSAAAIIGQDGSVWAQSATFPQLKPEEVTGIVRDFDEPGTL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKT L L+IGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTTLALLIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYL+E GL
Sbjct: 121 RLGDYLVEQGL 131

[Close]

BLAST of Lsi04G023190 vs. ExPASy Swiss-Prot
Match: Q5XWE1 (Profilin OS=Citrullus lanatus OX=3654 PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 9.6e-60
Identity = 104/131 (79.39%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMC+IEGN L++AAIIGQDG+VWA+S NFPQLKPEE+T I+NDF +P +L
Sbjct: 1   MSWQAYVDDHLMCEIEGNHLTSAAIIGQDGSVWAKSENFPQLKPEEITGILNDFNEPGTL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+ GG+KYMVIQGEPGAVIRGKKG GG+T+KKT L L+IGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYIGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTALALVIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLIE GL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Lsi04G023190 vs. ExPASy TrEMBL
Match: A0A5D2KQV4 (Profilin OS=Gossypium tomentosum OX=34277 GN=ES332_D05G031000v1 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.4e-61
Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMCDIEGN LSAAAIIGQDG+VWAQSSNFPQ KPEE+T IMNDFA+P SL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNL LIIGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLI+ GL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lsi04G023190 vs. ExPASy TrEMBL
Match: A0A1U8JNM2 (Profilin OS=Gossypium hirsutum OX=3635 GN=LOC107907176 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.4e-61
Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMCDIEGN LSAAAIIGQDG+VWAQSSNFPQ KPEE+T IMNDFA+P SL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNL LIIGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLI+ GL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lsi04G023190 vs. ExPASy TrEMBL
Match: A0A7J9C8I0 (Profilin OS=Gossypium gossypioides OX=34282 GN=Gogos_007411 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.4e-61
Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMCDIEGN LSAAAIIGQDG+VWAQSSNFPQ KPEE+T IMNDFA+P SL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNL LIIGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLI+ GL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lsi04G023190 vs. ExPASy TrEMBL
Match: A0A0D2UFB2 (Profilin OS=Gossypium raimondii OX=29730 GN=B456_009G028400 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.4e-61
Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMCDIEGN LSAAAIIGQDG+VWAQSSNFPQ KPEE+T IMNDFA+P SL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNL LIIGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLI+ GL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lsi04G023190 vs. ExPASy TrEMBL
Match: A0A7J9FQT5 (Profilin OS=Gossypium trilobum OX=34281 GN=Gotri_026909 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.4e-61
Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMCDIEGN LSAAAIIGQDG+VWAQSSNFPQ KPEE+T IMNDFA+P SL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNL LIIGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLI+ GL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lsi04G023190 vs. NCBI nr
Match: XP_038899070.1 (profilin-like isoform X2 [Benincasa hispida])

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-63
Identity = 124/132 (93.94%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 45  MSWQQYVDEHL-MCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPES 104
           MSWQ YVDEHL MCD EGNRLSAAAIIGQ+GTVWAQSSNFPQLKPEELTAIMNDFAQP S
Sbjct: 1   MSWQPYVDEHLMMCDTEGNRLSAAAIIGQNGTVWAQSSNFPQLKPEELTAIMNDFAQPGS 60

Query: 105 LAPTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIV 164
           LAPTGLF GGTKYMVIQGEPGAVIRGKKG GGITIKKTNLGLIIGIYDEPVTPGQCNMIV
Sbjct: 61  LAPTGLFLGGTKYMVIQGEPGAVIRGKKGAGGITIKKTNLGLIIGIYDEPVTPGQCNMIV 120

Query: 165 ERLGDYLIEHGL 176
           ERLGDYLIE GL
Sbjct: 121 ERLGDYLIEQGL 132

[Close]

BLAST of Lsi04G023190 vs. NCBI nr
Match: XP_012442617.1 (PREDICTED: profilin-2 [Gossypium raimondii] >XP_016689919.1 profilin-2 [Gossypium hirsutum] >KAB2027366.1 hypothetical protein ES319_D05G028200v1 [Gossypium barbadense] >MBA0622251.1 hypothetical protein [Gossypium davidsonii] >MBA0657744.1 hypothetical protein [Gossypium klotzschianum] >MBA0744803.1 hypothetical protein [Gossypium gossypioides] >MBA0787314.1 hypothetical protein [Gossypium trilobum] >MBA0806766.1 hypothetical protein [Gossypium harknessii] >MBA0878572.1 hypothetical protein [Gossypium schwendimanii] >TYG66829.1 hypothetical protein ES288_D05G030200v1 [Gossypium darwinii] >TYH69072.1 hypothetical protein ES332_D05G031000v1 [Gossypium tomentosum] >TYI79564.1 hypothetical protein E1A91_D05G029900v1 [Gossypium mustelinum])

HSP 1 Score: 245.0 bits (624), Expect = 4.9e-61
Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMCDIEGN LSAAAIIGQDG+VWAQSSNFPQ KPEE+T IMNDFA+P SL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNL LIIGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLI+ GL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lsi04G023190 vs. NCBI nr
Match: XP_017645931.1 (PREDICTED: profilin-1 [Gossypium arboreum] >KHG29269.1 Profilin-1 [Gossypium arboreum])

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60
Identity = 112/131 (85.50%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMCDIEGN LSAAAIIGQDG+VWAQSSNFPQ KPEE+T IMNDF++P SL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFSEPGSL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNL LIIGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLI+ GL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lsi04G023190 vs. NCBI nr
Match: XP_016750049.1 (profilin-1 [Gossypium hirsutum] >KAB2079818.1 hypothetical protein ES319_A05G028500v1 [Gossypium barbadense] >TYH15267.1 hypothetical protein ES288_A05G028000v1 [Gossypium darwinii] >TYI25120.1 hypothetical protein ES332_A05G029600v1 [Gossypium tomentosum] >TYJ32356.1 hypothetical protein E1A91_A05G029200v1 [Gossypium mustelinum] >KAG4197493.1 hypothetical protein ERO13_A05G026500v2 [Gossypium hirsutum])

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60
Identity = 112/131 (85.50%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMCDIEGN LSAAAIIGQDG+VWAQSSNFPQ KPEE+T IMNDF++P SL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFSEPGSL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGL+ GGTKYMVIQGEPGAVIRGKKG GG+T+KKTNL LIIGIYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLSLIIGIYDEPMTPGQCNMIVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLI+ GL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lsi04G023190 vs. NCBI nr
Match: RYR07358.1 (hypothetical protein Ahy_B05g074696 [Arachis hypogaea])

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-60
Identity = 112/133 (84.21%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 43  KKMSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPE 102
           KKMSWQ YVD+HL+C+IEGN LS+AAI+GQDG+VWAQSSNFPQ KPEE+TAIMNDFA+P 
Sbjct: 147 KKMSWQTYVDDHLLCEIEGNHLSSAAILGQDGSVWAQSSNFPQFKPEEITAIMNDFAEPG 206

Query: 103 SLAPTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMI 162
           SLAPTGL+ GGTKYMVIQGEPGAVIRGKKG GG+TIKKTN  LIIGIYDEP+TPGQCNMI
Sbjct: 207 SLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTNQALIIGIYDEPMTPGQCNMI 266

Query: 163 VERLGDYLIEHGL 176
           VERLGDYLI+ GL
Sbjct: 267 VERLGDYLIDTGL 279

[Close]

BLAST of Lsi04G023190 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 224.6 bits (571), Expect = 6.4e-59
Identity = 106/150 (70.67%), Postives = 122/150 (81.33%), Query Frame = 0


Query: 29  STKTSELNRFKGIKKK---MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQ 88
           S K    +R K  KKK   MSWQ YVD+HLMCD+ GNRL+AAAI+GQDG+VWAQS+NFPQ
Sbjct: 19  SDKPQRRSRAKVKKKKKTNMSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQ 78

Query: 89  LKPEELTAIMNDFAQPESLAPTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGL 148
           +KPEE+  I +DF  P +LAPTGLF GG KYMVIQGEP AVIRGKKG GG+TIKKT L L
Sbjct: 79  VKPEEIQGIKDDFTTPGTLAPTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLAL 138

Query: 149 IIGIYDEPVTPGQCNMIVERLGDYLIEHGL 176
           + GIYDEP+TPGQCNM+VE LG+YLIE GL
Sbjct: 139 VFGIYDEPMTPGQCNMVVENLGEYLIESGL 168

[Close]

BLAST of Lsi04G023190 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 211.8 bits (538), Expect = 4.3e-55
Identity = 97/134 (72.39%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDI---EGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQP 104
           MSWQ YVDEHLMCD+   +G+ L+AAAIIG DG+VWAQS+NFPQ KP+E+T IM DF +P
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 105 ESLAPTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNM 164
             LAPTG+F  G KYMVIQGEP AVIRGKKG GGITIKKT   ++ G+Y+EPVTPGQCNM
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 165 IVERLGDYLIEHGL 176
           +VERLGDYLIE GL
Sbjct: 121 VVERLGDYLIEQGL 134

[Close]

BLAST of Lsi04G023190 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 211.8 bits (538), Expect = 4.3e-55
Identity = 96/131 (73.28%), Postives = 110/131 (83.97%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMCD+EGN L+AAAI+GQDG+VWAQS+ FPQLKP+E+  I  DF +P  L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGLF GG KYMVIQGE GAVIRGKKG GG+TIKKTN  L+ G YDEP+T GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLIE  L
Sbjct: 121 RLGDYLIESEL 131

[Close]

BLAST of Lsi04G023190 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 208.4 bits (529), Expect = 4.7e-54
Identity = 96/134 (71.64%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDI---EGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQP 104
           MSWQ YVDEHLMCD+   +G+ L+AAAI+G DG+VWAQS+NFPQ K +E + IM DF +P
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 105 ESLAPTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNM 164
             LAPTGLF  G KYMVIQGEPGAVIRGKKG GGITIKKT    + GIY+EPVTPGQCNM
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 165 IVERLGDYLIEHGL 176
           +VERLGDYL+E GL
Sbjct: 121 VVERLGDYLLEQGL 134

[Close]

BLAST of Lsi04G023190 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 205.7 bits (522), Expect = 3.1e-53
Identity = 94/131 (71.76%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 45  MSWQQYVDEHLMCDIEGNRLSAAAIIGQDGTVWAQSSNFPQLKPEELTAIMNDFAQPESL 104
           MSWQ YVD+HLMC++EGN L+ AAI GQDG+VWAQSS FPQLKP E+  I  DF +   L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 105 APTGLFHGGTKYMVIQGEPGAVIRGKKGGGGITIKKTNLGLIIGIYDEPVTPGQCNMIVE 164
           APTGLF GG KYMV+QGE GAVIRGKKG GG+TIKKT   L+ GIYDEP+T GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVE 120

Query: 165 RLGDYLIEHGL 176
           RLGDYLIE GL
Sbjct: 121 RLGDYLIESGL 131

The following BLAST results are available for this feature:

BLAST of Lsi04G023190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YI9	1.5e-60	82.44	Profilin OS=Capsicum annuum OX=4072 PE=1 SV=1	[more]
O82572	1.9e-60	81.68	Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1	[more]
Q8GT39	5.6e-60	80.15	Profilin OS=Prunus persica OX=3760 PE=1 SV=1	[more]
P0C0Y3	7.4e-60	80.15	Profilin OS=Fragaria ananassa OX=3747 PE=1 SV=1	[more]
Q5XWE1	9.6e-60	79.39	Profilin OS=Citrullus lanatus OX=3654 PE=1 SV=1	[more]

BLAST of Lsi04G023190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D2KQV4	2.4e-61	86.26	Profilin OS=Gossypium tomentosum OX=34277 GN=ES332_D05G031000v1 PE=3 SV=1	[more]
A0A1U8JNM2	2.4e-61	86.26	Profilin OS=Gossypium hirsutum OX=3635 GN=LOC107907176 PE=3 SV=1	[more]
A0A7J9C8I0	2.4e-61	86.26	Profilin OS=Gossypium gossypioides OX=34282 GN=Gogos_007411 PE=3 SV=1	[more]
A0A0D2UFB2	2.4e-61	86.26	Profilin OS=Gossypium raimondii OX=29730 GN=B456_009G028400 PE=3 SV=1	[more]
A0A7J9FQT5	2.4e-61	86.26	Profilin OS=Gossypium trilobum OX=34281 GN=Gotri_026909 PE=3 SV=1	[more]

BLAST of Lsi04G023190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899070.1	1.4e-63	93.94	profilin-like isoform X2 [Benincasa hispida]	[more]
XP_012442617.1	4.9e-61	86.26	PREDICTED: profilin-2 [Gossypium raimondii] >XP_016689919.1 profilin-2 [Gossypiu...	[more]
XP_017645931.1	1.1e-60	85.50	PREDICTED: profilin-1 [Gossypium arboreum] >KHG29269.1 Profilin-1 [Gossypium arb...	[more]
XP_016750049.1	1.1e-60	85.50	profilin-1 [Gossypium hirsutum] >KAB2079818.1 hypothetical protein ES319_A05G028...	[more]
RYR07358.1	2.4e-60	84.21	hypothetical protein Ahy_B05g074696 [Arachis hypogaea]	[more]

BLAST of Lsi04G023190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56600.1	6.4e-59	70.67	profilin 3	[more]
AT2G19770.1	4.3e-55	72.39	profilin 5	[more]
AT2G19760.1	4.3e-55	73.28	profilin 1	[more]
AT4G29340.1	4.7e-54	71.64	profilin 4	[more]
AT4G29350.1	3.1e-53	71.76	profilin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 96..110 score: 66.3 coord: 148..161 score: 90.0 coord: 45..58 score: 82.86 coord: 161..174 score: 77.27 coord: 71..84 score: 75.45 coord: 115..124 score: 96.73 coord: 128..143 score: 77.27
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 65..74 score: 64.0 coord: 47..56 score: 71.0 coord: 84..104 score: 46.31 coord: 144..157 score: 62.14 coord: 108..122 score: 70.0 coord: 157..174 score: 68.61
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 45..175 e-value: 4.7E-55 score: 198.9
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 45..174 e-value: 3.0E-41 score: 140.5
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 45..175
IPR005455	Profilin	CDD	cd00148	PROF	coord: 46..174 e-value: 5.33403E-43 score: 137.842
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 43..175 e-value: 5.5E-54 score: 183.8
None	No IPR available	PANTHER	PTHR11604:SF44	PROFILIN-2	coord: 45..175
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 46..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G023190.1	Lsi04G023190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding