Lsi04G022320 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G022320
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	cryptochrome-1
Location	chr04: 29366679 .. 29371554 (+)
RNA-Seq Expression	Lsi04G022320
Synteny	Lsi04G022320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATTAAAAAGTGAAATATTTTAATGGATTCTCCTAGTCCTTCTGGTCTCTCTATGTTAATCCTTCCAACAGTGCCAAAAAGGCAGAGGGAAAAAAATATAAGGTAAAGAAACAATTAAAAAAAAAGACTCACAGAAGAGAGAGAGAGAGAGAAGGAGGAGGATGGATATGGTTCATTGGTGAGTGACAGAAAAAGGGTACGTATTTTCTGGGTTGTTGGATTGGTGCTTTTTATTTTGTGAGATGTCAGGTGGCGGTTGCAGCATAGTTTGGTTCAGAAGAGATCTCAGGGTTGAAGATAACCCAGCTCTTACCGCCGCCGTCAGGGCTGGCGCCGTCGTCGCCGTCTTCATCTGGGCTCCGGAGGAAGAGGGTCACTATTATCCCGGTAGGGTCTCCCGATGGTGGCTCAAACAGAGCTTAGCCCATCTTGATTCCTCTCTTAGAAGCCTTGGTACTTTTCTTCTCACTAAGAGATCCACCAACACCATTTCTGCTTTGCTTGACGTCGTTAAAGCCACTGGTGCTTCTCAACTCTTCTTCAATCACTTATACGGTCTGTTTTTCTTCTTCAATTGCAAACCCCTTCTTTAATTTCTCTGCTTTTCTTCTTTCTTTCTCTGTAATTGAAGTTTGTTTCCTATCACCCTTTTCTAGAATTGATTTGTTTGTGTTGTGGTCAGTGTATGATGTTCTTGGATGTGCTTGGAATAATTTGTATAGTGATCTAATTTTTCTTCCGTTTTGTAGGTTTTTTAATGATGAAGATATTTTGTTGATGTGTGTGTGGCATTATACTGAGATTTTTATTCATCTGCTTGTCAATTGTTATTAATTACTGGGCGAAGTCTGCTTATTATTGATATAAATTGTCTTCTCGGACTACTACTGTAAGTCTGTAAGTGTTCGAGTTTTCATAGAATTGGAAAGAGTGGTTCTTAAATGATTGTGATGTGAATAGATTCTCCCCTTTAGAATTGGTATCTTATGGAATTTTCTTTGATGTCTTGATAATGATTTGGAAATACATATCTTATGAAAGCAAATCTGTTTGTCAGATCCTTTGTCGCTCATTCGGGATCATCGAGCGAAGGAGGTTTTATCTGCTCAAGGCATAGGTGTGAGGTCCTACAATGCGGATTTACTGTACGAACCATGGGATGTTAAGGATGCCAACGGCAATCCATTTACTACCTTTGCTGGTTTCTGGGAGAGATGTCTCAGCATGCCTTGTGATCCAGAGGCACCACTACTCCCACCTAAGAGAATAATTTCAGGTTGCTTTTCTAAAATTTAGTTGAACAAGTCTTGTGTTTACTTCATTTTTTTTTCTTATCATGTATTTGATTGATCACTAACACTCTCTAGTTGTTGTGTTTGTTTGTTTGTTTGTTCTACATGATGGTTTTCGCTAGAGAGAACACTTTCTAATTGTGATTCTCAAATATTTGTTCATCCATTTTAGTTTCAGTCAATGCTGTGAAGTTTGAAGTGTTATAAAGCTGGTCCTTGTTCTTTCTAATATATCAAGTGTGTTTTGGGTACCGCGAAGTAGCATAGTTGGTTTCATTAGTCTAAGCTTCTTCTCCTTTCACATAATTGGTGGAAAACAGAGACAATTATACTTCCCACACATGATTTTACACTCTTATATGACTATATGAGAGAGTCCGGCCATCCTACTTTAATGTTATTTGCTTCTGGTTAGATTAATAAGAAAGTAGTATCACTTGTTACATGTTTAGATGGCTTGTTCCAGCTTATTATTAGGTTGGTGCATAAACATAGAATAGCATTTGAGAACACTGGCCTTGCTGAAATTTAGCTGTCTGATTGAGAAAACAAATAGCCAATGGAGAGAGGTGCTAGGCCTGTGCAATTCTGTTGTCAAGAGATCTTAAATCTAGAGTCATCAAACTACTTTTCAGGTTTATGTTCGCTTATAGAGTACTTATCCTTCTAAGAGATGGTTACTTGCAAACTAGTAGACCATGAAAAGGAGGTTTCTTCTGATGTAGATGGGCTTGCCGTGGAAATAAACCATTGCATATTTTCACATTTGAAGTATGTGCTTGCTGTTCATTCATTGTTTCTCTTTTATCTAAATGGAAAGCTACTTGGGAATGAAGCATTTTGTGGGAACTTTAACTTCCTCCCCATATATTGCCTCTATCTCTTCTATCGAAGGCATGTACTGTTTTTGAACATCATCTGTCTTAAAAGATTCACTCTACATATTGTCTTTGCTCCTTCAGGTGATGCATCTAGGTGCCCATGTGACACGTTGGTATTTGAAGATGAATCTGAGAAGGGAAGCAATGCGCTTCTCTCCCGAGCATGGTCTCCTGGATGGAGCAACGCAGATAAAGCTTTGACCACGTTCATCAATGGACCATTACTTGAATACTCAAAAAATCGTAGGAAGGCGGATAGTGCAACCACCTCGTTTCTGTCTCCCCACTTGCATTTTGGAGAGGTGAGTGTGAGAAAAGTGTTTCATCTTGTTCGAATGAAGCAGGTTTTATGGGCCAATGAAGGAAACAAGGCCGGCGATGAGAGTGTCAACTTGTTTCTCAAGTCTATTGGACTCAGAGAATATTCCAGATACATGAGTTTCAACCATCCTTACAGTCATGAAAGGCCTCTTCTTGGGCATCTTAAATTCTTTCCCTGGGTTGTGGATGAAGGCTATTTTAAGGCATGGAGGCAAGGAAGGACTGGTTATCCATTAGTGGATGCTGGTATGAGGGAATTGTGGGCTACGGGGTGGCTGCATGATCGGATTCGAGTTGTCGTTTCTAGTTTCTTTGTGAAGGTTCTGCAGCTTCCTTGGAGATGGGGAATGAAGTATTTCTGGGATACTCTCTTGGATGCAGACCTCGAGAGTGATGCGCTTGGTTGGCAATACATATCTGGCACACTTCCCGATGGCCGTGAATTTGATCGCATTGACAATCCACAGGTGCACACACCTTTAGAGTTCTTCCTCAAATGTTCACATCTATCCTCTGAATTTATCTAAAAGTTGATATCTTCCTACTCCTTGCTTGTGCAAAGAGGTTTCTTATTGAGGGTTTTAGAAATGAAAATTTCCAAAAAACGGTCTTATTTTATAGCTGCAACTCTATCCTCTGCAATTGACTAGACTTGAGTCCTCAATTTGCTTGCTCATGCTCTTGTATGACGTGTTTCTGGATGAAATTATCTGTACTAATTGTTGGTTTTCTACAGCTGGAGGGTTATAAATTCGACCCAAATGGAGAATATGTCCGGAGATGGCTTCCTGAACTTTCTAGATTGCCCACTGAATGGATTCATCACCCATGGAATGCACCTGAATCTGTGCTCCAAGCTGCTGGGATTGAGCTTGGATCAAACTACCCTCTTCCCATCGTAGGACTGGATGCAGCTAAAGCTAGGTTGGAAGAAGCGCTGTCCGAGATGTGGCAACAAGAAGCGGCTTCAAGGGCTGCAATTGAGAATGGAACTGAAGAGGGACTCGGGGACTCTTCTGAGTCGATCCCAATTGCATTTCCTCAAGACATAGCAATGGAGGAGGAAGACCTTGAGCCTGCAAGGATGAACGCTCATACAGTTCGGTGCTACGAGGATCAGATGGTCCCGAGCATGACTAGTTCGGTGAGATTAGAAGATGAACCTTCTTTAAATATTCAAAGTACAGCAGAAGATGGCAGAGCAGAAGTACCTACAAATGCAAATCTACTCCAAGAGCCCACCAGAGATGCAGTAAACCCAAGAGTTCTGCCAACTGCTCCGACACAGACTCGACGCCCCTATACCGCAGGTATAGCCCTAAGAACTTCTGTTGAAGACTCCACTGCCGAGTCTTCTTCCAGTAGTGATGTTAGAAGAGAGAGAGATGGAGGTGTGGTTCCGGTTTGGTCTCCACCAAGTTCAAGTTACACGGAGCAGTTTGTGGTTGATGAAAATGGCATCGGAACAAGCTCTTCGTTCTTGCAGGGGCATCAACAGACTCATCAAATAATCAATTGGAGGCGGCTATCTCAGACTGGGTAACAACTTGTGAATCATATGCAGTAGAGCAGATAAAATGTTCATTTCTCTGATGGCCATATCCCACAAGAAGTAGTTGGTAGCTTGGACTTCTTTTTCCGTCTAGCGAAAAATATGAACGTTGCGCTGCATAATCTTCATCCTATAATATGAAAAATTCATGTTTGTTACAGTTGTTTCTCTGTCATTTGACATGATTCAATGGGCTTTTCTTTAACAGGTGAGTGGCAAATATGGGAAAACTAGCAGATAGAGGAGGAGAATGCAAATTCACTCAATGCTATTCTATTAGGGGTGGTCAGGTCAGCCAGATGGTGAACCAGCAACACACTAACATGTTCTTCTACTTTCTCCACCAATCTGACTTGACCATTGGTCATTGTCATGTGTATGAAATTCCTAACTGATAGATGCAGTTCATCTGCTGATGGTCATATCCCTCCCTCTCGCTCTCGTGCTCTTTCCGTTATTACGGTTGTATCATAAGTCTTTCTATGCTGTATAGTGAAAGTTGTAATTTGTGTAGCTGTAACACAAGGGTAGAGAATTGAAATAGCGATTGTCGTTGTCTTCGAATAAACTCAAGTTTGCGACTAGCCCGGATTCTTGTAAGCTTATGCTTAAGCTATGGAAATATTTCTCTATCTTGCTTGCCTGTAAGATTAGATGCCCAACTCTTTCTTTGTAAACTAAAAGAAGAAAGTTTTGAGATTCTTCTCTGTTTTTGTGTGCTCAAGCCTGCCCCATGATCATTTTCAGATGGCACTGAGTAATAGGATTAGATCAAGAGATTGCACTCATTTTATATACCAAGATAAATGCTGATCACCATTTCTGG

mRNA sequence

AAAAAATTAAAAAGTGAAATATTTTAATGGATTCTCCTAGTCCTTCTGGTCTCTCTATGTTAATCCTTCCAACAGTGCCAAAAAGGCAGAGGGAAAAAAATATAAGGTAAAGAAACAATTAAAAAAAAAGACTCACAGAAGAGAGAGAGAGAGAGAAGGAGGAGGATGGATATGGTTCATTGGTGAGTGACAGAAAAAGGGTACGTATTTTCTGGGTTGTTGGATTGGTGCTTTTTATTTTGTGAGATGTCAGGTGGCGGTTGCAGCATAGTTTGGTTCAGAAGAGATCTCAGGGTTGAAGATAACCCAGCTCTTACCGCCGCCGTCAGGGCTGGCGCCGTCGTCGCCGTCTTCATCTGGGCTCCGGAGGAAGAGGGTCACTATTATCCCGGTAGGGTCTCCCGATGGTGGCTCAAACAGAGCTTAGCCCATCTTGATTCCTCTCTTAGAAGCCTTGGTACTTTTCTTCTCACTAAGAGATCCACCAACACCATTTCTGCTTTGCTTGACGTCGTTAAAGCCACTGGTGCTTCTCAACTCTTCTTCAATCACTTATACGATCCTTTGTCGCTCATTCGGGATCATCGAGCGAAGGAGGTTTTATCTGCTCAAGGCATAGGTGTGAGGTCCTACAATGCGGATTTACTGTACGAACCATGGGATGTTAAGGATGCCAACGGCAATCCATTTACTACCTTTGCTGGTTTCTGGGAGAGATGTCTCAGCATGCCTTGTGATCCAGAGGCACCACTACTCCCACCTAAGAGAATAATTTCAGTCAATGCTGTGAAGTTTGAATCTAAGCTTCTTCTCCTTTCACATAATTGGTGGAAAACAGAGACAATTATACTTCCCACACATGATTTTACACTCTTATATGACTATATGAGAGAGTCCGGCCATCCTACTTTAATGTTATTTGCTTCTGAGATGGTTACTTGCAAACTAGTAGACCATGAAAAGGAGGTTTCTTCTGATGTAGATGGGCTTGCCGTGGAAATAAACCATTGCATATTTTCACATTTGAAGTATGTGCTTGCTGTTCATTCATTGTTTCTCTTTTATCTAAATGGAAAGCTACTTGGGAATGAAGCATTTTGTGGGAACTTTAACTTCCTCCCCATATATTGCCTCTATCTCTTCTATCGAAGGCATGTACTGTTTTTGAACATCATCTGTCTTAAAAGATTCACTCTACATATTGTCTTTGCTCCTTCAGGTGATGCATCTAGGTGCCCATGTGACACGTTGGTATTTGAAGATGAATCTGAGAAGGGAAGCAATGCGCTTCTCTCCCGAGCATGGTCTCCTGGATGGAGCAACGCAGATAAAGCTTTGACCACGTTCATCAATGGACCATTACTTGAATACTCAAAAAATCGTAGGAAGGCGGATAGTGCAACCACCTCGTTTCTGTCTCCCCACTTGCATTTTGGAGAGGTGAGTGTGAGAAAAGTGTTTCATCTTGTTCGAATGAAGCAGGTTTTATGGGCCAATGAAGGAAACAAGGCCGGCGATGAGAGTGTCAACTTGTTTCTCAAGTCTATTGGACTCAGAGAATATTCCAGATACATGAGTTTCAACCATCCTTACAGTCATGAAAGGCCTCTTCTTGGGCATCTTAAATTCTTTCCCTGGGTTGTGGATGAAGGCTATTTTAAGGCATGGAGGCAAGGAAGGACTGGTTATCCATTAGTGGATGCTGGTATGAGGGAATTGTGGGCTACGGGGTGGCTGCATGATCGGATTCGAGTTGTCGTTTCTAGTTTCTTTGTGAAGGTTCTGCAGCTTCCTTGGAGATGGGGAATGAAGTATTTCTGGGATACTCTCTTGGATGCAGACCTCGAGAGTGATGCGCTTGGTTGGCAATACATATCTGGCACACTTCCCGATGGCCGTGAATTTGATCGCATTGACAATCCACAGCTGCAACTCTATCCTCTGCAATTGACTAGACTTGAGTCCTCAATTTGCTTGCTCATGCTCTTGTATGACCTGGAGGGTTATAAATTCGACCCAAATGGAGAATATGTCCGGAGATGGCTTCCTGAACTTTCTAGATTGCCCACTGAATGGATTCATCACCCATGGAATGCACCTGAATCTGTGCTCCAAGCTGCTGGGATTGAGCTTGGATCAAACTACCCTCTTCCCATCGTAGGACTGGATGCAGCTAAAGCTAGGTTGGAAGAAGCGCTGTCCGAGATGTGGCAACAAGAAGCGGCTTCAAGGGCTGCAATTGAGAATGGAACTGAAGAGGGACTCGGGGACTCTTCTGAGTCGATCCCAATTGCATTTCCTCAAGACATAGCAATGGAGGAGGAAGACCTTGAGCCTGCAAGGATGAACGCTCATACAGTTCGGTGCTACGAGGATCAGATGGTCCCGAGCATGACTAGTTCGGTGAGATTAGAAGATGAACCTTCTTTAAATATTCAAAGTACAGCAGAAGATGGCAGAGCAGAAGTACCTACAAATGCAAATCTACTCCAAGAGCCCACCAGAGATGCAGTAAACCCAAGAGTTCTGCCAACTGCTCCGACACAGACTCGACGCCCCTATACCGCAGGTATAGCCCTAAGAACTTCTGTTGAAGACTCCACTGCCGAGTCTTCTTCCAGTAGTGATGTTAGAAGAGAGAGAGATGGAGGTGTGGTTCCGGTTTGGTCTCCACCAAGTTCAAGTTACACGGAGCAGTTTGTGGTTGATGAAAATGGCATCGGAACAAGCTCTTCGTTCTTGCAGGGGCATCAACAGACTCATCAAATAATCAATTGGAGGCGGCTATCTCAGACTGGGTGAGTGGCAAATATGGGAAAACTAGCAGATAGAGGAGGAGAATGCAAATTCACTCAATGCTATTCTATTAGGGGTGGTCAGGTCAGCCAGATGGTGAACCAGCAACACACTAACATGTTCTTCTACTTTCTCCACCAATCTGACTTGACCATTGGTCATTGTCATGTGTATGAAATTCCTAACTGATAGATGCAGTTCATCTGCTGATGGTCATATCCCTCCCTCTCGCTCTCGTGCTCTTTCCGTTATTACGGTTGTATCATAAGTCTTTCTATGCTGTATAGTGAAAGTTGTAATTTGTGTAGCTGTAACACAAGGGTAGAGAATTGAAATAGCGATTGTCGTTGTCTTCGAATAAACTCAAGTTTGCGACTAGCCCGGATTCTTGTAAGCTTATGCTTAAGCTATGGAAATATTTCTCTATCTTGCTTGCCTGTAAGATTAGATGCCCAACTCTTTCTTTGTAAACTAAAAGAAGAAAGTTTTGAGATTCTTCTCTGTTTTTGTGTGCTCAAGCCTGCCCCATGATCATTTTCAGATGGCACTGAGTAATAGGATTAGATCAAGAGATTGCACTCATTTTATATACCAAGATAAATGCTGATCACCATTTCTGG

Coding sequence (CDS)

ATGTCAGGTGGCGGTTGCAGCATAGTTTGGTTCAGAAGAGATCTCAGGGTTGAAGATAACCCAGCTCTTACCGCCGCCGTCAGGGCTGGCGCCGTCGTCGCCGTCTTCATCTGGGCTCCGGAGGAAGAGGGTCACTATTATCCCGGTAGGGTCTCCCGATGGTGGCTCAAACAGAGCTTAGCCCATCTTGATTCCTCTCTTAGAAGCCTTGGTACTTTTCTTCTCACTAAGAGATCCACCAACACCATTTCTGCTTTGCTTGACGTCGTTAAAGCCACTGGTGCTTCTCAACTCTTCTTCAATCACTTATACGATCCTTTGTCGCTCATTCGGGATCATCGAGCGAAGGAGGTTTTATCTGCTCAAGGCATAGGTGTGAGGTCCTACAATGCGGATTTACTGTACGAACCATGGGATGTTAAGGATGCCAACGGCAATCCATTTACTACCTTTGCTGGTTTCTGGGAGAGATGTCTCAGCATGCCTTGTGATCCAGAGGCACCACTACTCCCACCTAAGAGAATAATTTCAGTCAATGCTGTGAAGTTTGAATCTAAGCTTCTTCTCCTTTCACATAATTGGTGGAAAACAGAGACAATTATACTTCCCACACATGATTTTACACTCTTATATGACTATATGAGAGAGTCCGGCCATCCTACTTTAATGTTATTTGCTTCTGAGATGGTTACTTGCAAACTAGTAGACCATGAAAAGGAGGTTTCTTCTGATGTAGATGGGCTTGCCGTGGAAATAAACCATTGCATATTTTCACATTTGAAGTATGTGCTTGCTGTTCATTCATTGTTTCTCTTTTATCTAAATGGAAAGCTACTTGGGAATGAAGCATTTTGTGGGAACTTTAACTTCCTCCCCATATATTGCCTCTATCTCTTCTATCGAAGGCATGTACTGTTTTTGAACATCATCTGTCTTAAAAGATTCACTCTACATATTGTCTTTGCTCCTTCAGGTGATGCATCTAGGTGCCCATGTGACACGTTGGTATTTGAAGATGAATCTGAGAAGGGAAGCAATGCGCTTCTCTCCCGAGCATGGTCTCCTGGATGGAGCAACGCAGATAAAGCTTTGACCACGTTCATCAATGGACCATTACTTGAATACTCAAAAAATCGTAGGAAGGCGGATAGTGCAACCACCTCGTTTCTGTCTCCCCACTTGCATTTTGGAGAGGTGAGTGTGAGAAAAGTGTTTCATCTTGTTCGAATGAAGCAGGTTTTATGGGCCAATGAAGGAAACAAGGCCGGCGATGAGAGTGTCAACTTGTTTCTCAAGTCTATTGGACTCAGAGAATATTCCAGATACATGAGTTTCAACCATCCTTACAGTCATGAAAGGCCTCTTCTTGGGCATCTTAAATTCTTTCCCTGGGTTGTGGATGAAGGCTATTTTAAGGCATGGAGGCAAGGAAGGACTGGTTATCCATTAGTGGATGCTGGTATGAGGGAATTGTGGGCTACGGGGTGGCTGCATGATCGGATTCGAGTTGTCGTTTCTAGTTTCTTTGTGAAGGTTCTGCAGCTTCCTTGGAGATGGGGAATGAAGTATTTCTGGGATACTCTCTTGGATGCAGACCTCGAGAGTGATGCGCTTGGTTGGCAATACATATCTGGCACACTTCCCGATGGCCGTGAATTTGATCGCATTGACAATCCACAGCTGCAACTCTATCCTCTGCAATTGACTAGACTTGAGTCCTCAATTTGCTTGCTCATGCTCTTGTATGACCTGGAGGGTTATAAATTCGACCCAAATGGAGAATATGTCCGGAGATGGCTTCCTGAACTTTCTAGATTGCCCACTGAATGGATTCATCACCCATGGAATGCACCTGAATCTGTGCTCCAAGCTGCTGGGATTGAGCTTGGATCAAACTACCCTCTTCCCATCGTAGGACTGGATGCAGCTAAAGCTAGGTTGGAAGAAGCGCTGTCCGAGATGTGGCAACAAGAAGCGGCTTCAAGGGCTGCAATTGAGAATGGAACTGAAGAGGGACTCGGGGACTCTTCTGAGTCGATCCCAATTGCATTTCCTCAAGACATAGCAATGGAGGAGGAAGACCTTGAGCCTGCAAGGATGAACGCTCATACAGTTCGGTGCTACGAGGATCAGATGGTCCCGAGCATGACTAGTTCGGTGAGATTAGAAGATGAACCTTCTTTAAATATTCAAAGTACAGCAGAAGATGGCAGAGCAGAAGTACCTACAAATGCAAATCTACTCCAAGAGCCCACCAGAGATGCAGTAAACCCAAGAGTTCTGCCAACTGCTCCGACACAGACTCGACGCCCCTATACCGCAGGTATAGCCCTAAGAACTTCTGTTGAAGACTCCACTGCCGAGTCTTCTTCCAGTAGTGATGTTAGAAGAGAGAGAGATGGAGGTGTGGTTCCGGTTTGGTCTCCACCAAGTTCAAGTTACACGGAGCAGTTTGTGGTTGATGAAAATGGCATCGGAACAAGCTCTTCGTTCTTGCAGGGGCATCAACAGACTCATCAAATAATCAATTGGAGGCGGCTATCTCAGACTGGGTGA

Protein sequence

MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNAVKFESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKEVSSDVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFYRRHVLFLNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSSVRLEDEPSLNIQSTAEDGRAEVPTNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQIINWRRLSQTG

Homology

[Close]

BLAST of Lsi04G022320 vs. ExPASy Swiss-Prot
Match: Q43125 (Cryptochrome-1 OS=Arabidopsis thaliana OX=3702 GN=CRY1 PE=1 SV=2)

HSP 1 Score: 1008.8 bits (2607), Expect = 3.6e-293
Identity = 536/859 (62.40%), Postives = 591/859 (68.80%), Query Frame = 0


Query: 4   GGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHL 63
           GGCSIVWFRRDLRVEDNPAL AAVRAG V+A+F+WAPEEEGHY+PGRVSRWWLK SLA L
Sbjct: 11  GGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQL 70

Query: 64  DSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQG 123
           DSSLRSLGT L+TKRST+++++LLDVVK+TGASQ+FFNHLYDPLSL+RDHRAK+VL+AQG
Sbjct: 71  DSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQG 130

Query: 124 IGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNAVKF 183
           I VRS+NADLLYEPW+V D  G PF+ FA FWERCLSMP DPE+PLLPPK+II       
Sbjct: 131 IAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKII------- 190

Query: 184 ESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKEVSS 243
                                                                       
Sbjct: 191 ------------------------------------------------------------ 250

Query: 244 DVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFYRRH 303
                                                                       
Sbjct: 251 ------------------------------------------------------------ 310

Query: 304 VLFLNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNADKA 363
                               SGD S+C  D LVFED+SEKGSNALL+RAWSPGWSN DKA
Sbjct: 311 --------------------SGDVSKCVADPLVFEDDSEKGSNALLARAWSPGWSNGDKA 370

Query: 364 LTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAG 423
           LTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVR+KQV WANEGN+AG
Sbjct: 371 LTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAG 430

Query: 424 DESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPL 483
           +ESVNLFLKSIGLREYSRY+SFNHPYSHERPLLGHLKFFPW VDE YFKAWRQGRTGYPL
Sbjct: 431 EESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPL 490

Query: 484 VDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 543
           VDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI
Sbjct: 491 VDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 550

Query: 544 SGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWLPEL 603
           +GTLPD REFDRIDNPQ                        EGYKFDPNGEYVRRWLPEL
Sbjct: 551 TGTLPDSREFDRIDNPQ-----------------------FEGYKFDPNGEYVRRWLPEL 610

Query: 604 SRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAASRA 663
           SRLPT+WIHHPWNAPESVLQAAGIELGSNYPLPIVGLD AKARL EALS+MWQ EAASRA
Sbjct: 611 SRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQMWQLEAASRA 670

Query: 664 AIENGTEEGLGDSS--ESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSSV- 723
           AIENG+EEGLGDS+  E  PI FP+DI MEE   EP R+N +  R YEDQMVPS+TSS+ 
Sbjct: 671 AIENGSEEGLGDSAEVEEAPIEFPRDITMEE--TEPTRLNPN--RRYEDQMVPSITSSLI 681

Query: 724 --RLEDEPSLNIQSTAEDGRAEVP---TNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAG 783
               ++E SLN++++  D RAEVP    N N  Q+   +  + +V    P    R     
Sbjct: 731 RPEEDEESSLNLRNSVGDSRAEVPRNMVNTNQAQQRRAEPASNQVTAMIPEFNIR----- 681

Query: 784 IALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIG---TSSSFL 843
             +  S EDSTAESSSS   RRER GG+VP WSP    Y+EQF  +ENGIG   T+SS+L
Sbjct: 791 -IVAESTEDSTAESSSSG--RRERSGGIVPEWSP---GYSEQFPSEENGIGGGSTTSSYL 681

Query: 844 QGHQQTHQIINWRRLSQTG 852
           Q H   H+I+NWRRLSQTG
Sbjct: 851 QNH---HEILNWRRLSQTG 681

[Close]

BLAST of Lsi04G022320 vs. ExPASy Swiss-Prot
Match: Q96524 (Cryptochrome-2 OS=Arabidopsis thaliana OX=3702 GN=CRY2 PE=1 SV=2)

HSP 1 Score: 607.4 bits (1565), Expect = 2.4e-172
Identity = 310/674 (45.99%), Postives = 391/674 (58.01%), Query Frame = 0


Query: 7   SIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSS 66
           +IVWFRRDLR+EDNPAL AA   G+V  VFIW PEEEG +YPGR SRWW+KQSLAHL  S
Sbjct: 7   TIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLSQS 66

Query: 67  LRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGV 126
           L++LG+ L   ++ NTISA+LD ++ TGA+++ FNHLYDP+SL+RDH  KE L  +GI V
Sbjct: 67  LKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGISV 126

Query: 127 RSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNAVKFESK 186
           +SYN DLLYEPW++    G PFT+F  +W++CL M  +    L PP R++ + A      
Sbjct: 127 QSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSIE-SVMLPPPWRLMPITA------ 186

Query: 187 LLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKEVSSDVD 246
                                                  A+E +                
Sbjct: 187 ---------------------------------------AAEAIWA-------------- 246

Query: 247 GLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFYRRHVLF 306
                                                                       
Sbjct: 247 ------------------------------------------------------------ 306

Query: 307 LNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNADKALTT 366
                                  C  + L  E+E+EK SNALL+RAWSPGWSNADK L  
Sbjct: 307 -----------------------CSIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNE 366

Query: 367 FINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDES 426
           FI   L++Y+KN +K    +TS LSP+LHFGE+SVR VF   RMKQ++WA + N  G+ES
Sbjct: 367 FIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEES 426

Query: 427 VNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDA 486
            +LFL+ IGLREYSRY+ FN P++HE+ LL HL+FFPW  D   FKAWRQGRTGYPLVDA
Sbjct: 427 ADLFLRGIGLREYSRYICFNFPFTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDA 486

Query: 487 GMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGT 546
           GMRELWATGW+H+RIRV+VSSF VK L LPW+WGMKYFWDTLLDADLE D LGWQYISG+
Sbjct: 487 GMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGS 510

Query: 547 LPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWLPELSRL 606
           +PDG E DR+DNP LQ                       G K+DP GEY+R+WLPEL+RL
Sbjct: 547 IPDGHELDRLDNPALQ-----------------------GAKYDPEGEYIRQWLPELARL 510

Query: 607 PTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAASRAAIE 666
           PTEWIHHPW+AP +VL+A+G+ELG+NY  PIV +D A+  L +A+S   + +    AA  
Sbjct: 607 PTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAISRTREAQIMIGAA-- 510

Query: 667 NGTEEGLGDSSESI 681
              +E + DS E++
Sbjct: 667 --PDEIVADSFEAL 510

[Close]

BLAST of Lsi04G022320 vs. ExPASy Swiss-Prot
Match: P40115 (Cryptochrome-1 OS=Sinapis alba OX=3728 GN=PHR1 PE=2 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 1.6e-160
Identity = 301/654 (46.02%), Postives = 377/654 (57.65%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MS    +IVWFRRDLR+EDNPAL AA   G+V  VFIW PEEEG +YPGR SRWW+KQSL
Sbjct: 1   MSTNKKTIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHL  SL++LG+ L   ++ +T+SA+LD V+ATGA+++ FNHLYDP+SL+RDH  KE L 
Sbjct: 61  AHLRQSLKALGSELTLIKTHSTVSAILDCVRATGATKVVFNHLYDPVSLVRDHTVKEKLV 120

Query: 121 AQGIGVRSYNADLLYEP--WDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISV 180
            +GI V+SYN DL   P  + VK AN        G  ++CL M    E+ +LPP      
Sbjct: 121 ERGISVQSYNGDLCMSPGRYTVKRANLLLVLILTG--KKCLDM--SVESVVLPPP----- 180

Query: 181 NAVKFESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHE 240
                           W+    ++P                    L A+E V        
Sbjct: 181 ----------------WR----LMP--------------------LSAAETVWA------ 240

Query: 241 KEVSSDVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYL 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 FYRRHVLFLNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWS 360
                                          C  + L  E+E+EK SNALL+RAWSPGWS
Sbjct: 301 -------------------------------CSVEELGLENEAEKPSNALLTRAWSPGWS 360

Query: 361 NADKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANE 420
           NADK L  FI   L++Y+KN +K    +TS LSP+LHFGE+SVR+VF   RMKQ++WA +
Sbjct: 361 NADKILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRRVFQCARMKQIIWARD 420

Query: 421 GNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGR 480
            N  G+ES +LFL+ IGLR+YSR + FN P++HE+ LL HL+FFPW  D   FKAWRQGR
Sbjct: 421 KNGEGEESADLFLRGIGLRDYSRIICFNFPFTHEQSLLSHLRFFPWDADVDKFKAWRQGR 480

Query: 481 TGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDAL 540
           TGYPLVDAGMRELWATGW+H+RIRV+VSSF VK L LPW+WGMKYFWDTLLDADLE D +
Sbjct: 481 TGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDII 485

Query: 541 GWQYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRR 600
           GWQYISG+LPDG E DR+DNP +Q                       G K+DP GEY+R+
Sbjct: 541 GWQYISGSLPDGHELDRLDNPAIQ-----------------------GAKYDPEGEYIRQ 485

Query: 601 WLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALS 653
           WLPEL+RLPTEWIHHPW+AP +VL+A+G+ELG+NY  PIV +D A+  L +A+S
Sbjct: 601 WLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVVIDTARELLTKAIS 485

[Close]

BLAST of Lsi04G022320 vs. ExPASy Swiss-Prot
Match: A9CJC9 (Deoxyribodipyrimidine photo-lyase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=phrA PE=1 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.8e-72
Identity = 201/646 (31.11%), Postives = 274/646 (42.41%), Query Frame = 0


Query: 8   IVWFRRDLRVEDNPALTAAV-RAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSS 67
           IVWFR+DLR+ DN AL AAV   G V+ V+I    E+     G    WWL  SLA L SS
Sbjct: 9   IVWFRKDLRLSDNLALLAAVEHGGPVIPVYI---REKSAGPLGGAQEWWLHHSLAALSSS 68

Query: 68  LRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGV 127
           L   G  L+   S +    L D++  TGA  + +N  YDP  +  D   K+ L   G+ V
Sbjct: 69  LEKAGGRLVL-ASGDAERILRDLISETGADTVVWNRRYDPTGMATDKALKQKLRDDGLTV 128

Query: 128 RSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNAVKFESK 187
           RS++  LL+EP  ++  +G P+  +  FW R L    +P AP  PPK   S+ A K   K
Sbjct: 129 RSFSGQLLHEPSRLQTKSGGPYRVYTPFW-RALEGSDEPHAPADPPK---SLTAPKVWPK 188

Query: 188 LLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKEVSSDVD 247
              LS+  WK    +LPT       D+ ++                              
Sbjct: 189 SEKLSN--WK----LLPTKP-----DWAKD------------------------------ 248

Query: 248 GLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFYRRHVLF 307
                                                                       
Sbjct: 249 ------------------------------------------------------------ 308

Query: 308 LNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNADKALTT 367
                                                      S  W+PG + A   L  
Sbjct: 309 ------------------------------------------FSDIWTPGETGALDKLDD 368

Query: 368 FINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDES 427
           FI+G L  Y + R       TS LSPHL  GE+S   V+H  +                 
Sbjct: 369 FIDGALKGYEEGRDFPAKPATSLLSPHLAAGEISPAAVWHATK-------GLSRHIASND 428

Query: 428 VNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDA 487
           ++ F K I  RE+  ++ F+ P   E+        F W  DE  FKAW +G TGYP+VDA
Sbjct: 429 ISRFRKEIVWREFCYHLLFHFPELGEKNWNDSFDAFSWRDDEKSFKAWTRGMTGYPIVDA 470

Query: 488 GMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGT 547
           GMR+LW  G +H+R+R++V+SF +K L + WR G K+F DTL+DAD  S+A  WQ+++G+
Sbjct: 489 GMRQLWQHGTMHNRVRMIVASFLIKHLLIDWRKGEKWFRDTLVDADPASNAANWQWVAGS 470

Query: 548 LPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWLPELSRL 607
             D   F RI NP LQ                       G KFD +G+YVRR++PEL +L
Sbjct: 549 GADASPFFRIFNPILQ-----------------------GEKFDGDGDYVRRFVPELEKL 470

Query: 608 PTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALS 653
             ++IH P+ AP+  L+ AG+ELG  YPLPIV  D  KAR E AL+
Sbjct: 609 ERKYIHKPFEAPKDALKKAGVELGKTYPLPIV--DHGKAR-ERALA 470

[Close]

BLAST of Lsi04G022320 vs. ExPASy Swiss-Prot
Match: P12768 (Deoxyribodipyrimidine photo-lyase OS=Streptomyces griseus OX=1911 GN=phr PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 3.0e-42
Identity = 102/293 (34.81%), Postives = 147/293 (50.17%), Query Frame = 0


Query: 362 KALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNK 421
           K +T+++NGP+ +Y           TS LSPHLHFG VS  ++ H  R K       G  
Sbjct: 206 KLVTSWLNGPMADYEDGHDDLAGDATSRLSPHLHFGTVSAAELVHRAREK-------GGL 265

Query: 422 AGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFP----WVVDEGYFKAWRQG 481
            G+     F++ +  R+      F+H    +RP      + P    W  D     AW+ G
Sbjct: 266 GGE----AFVRQLAWRD------FHHQVLADRPDASWSDYRPRHDRWRSDADEMHAWKSG 325

Query: 482 RTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDA 541
            TGYPLVDA MR+L   GW+H+R R++ +SF  K L + WR G ++F D L+D D+ ++ 
Sbjct: 326 LTGYPLVDAAMRQLAHEGWMHNRARMLAASFLTKTLYVDWREGARHFLDLLVDGDVANNQ 385

Query: 542 LGWQYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVR 601
           L WQ+++GT  D R  +R+ NP +Q                       G +FD  G+YVR
Sbjct: 386 LNWQWVAGTGTDTRP-NRVLNPVIQ-----------------------GKRFDARGDYVR 445

Query: 602 RWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEA 651
            W+PEL+ +    IH PW      L  AG++    YP P+V L  A+AR E A
Sbjct: 446 GWVPELAEVEGSAIHEPWKL--QGLDRAGLD----YPDPVVDLAEARARFERA 451

[Close]

BLAST of Lsi04G022320 vs. ExPASy TrEMBL
Match: A0A0A0LDY1 (Photolyase/cryptochrome alpha/beta domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889670 PE=3 SV=1)

HSP 1 Score: 1300.8 bits (3365), Expect = 0.0e+00
Identity = 663/851 (77.91%), Postives = 671/851 (78.85%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVV VFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVVVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGT+LLTKRSTNTISALLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTYLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNA 180
           AQGI VRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRII    
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRII---- 180

Query: 181 VKFESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKE 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 VSSDVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFY 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 RRHVLFLNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNA 360
                                  SGDASRCPCDTLVFEDESEKGSNALL+RAWSPGWSNA
Sbjct: 301 -----------------------SGDASRCPCDTLVFEDESEKGSNALLARAWSPGWSNA 360

Query: 361 DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN 420
           DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN
Sbjct: 361 DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN 420

Query: 421 KAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG 480
           KAG+ESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG
Sbjct: 421 KAGEESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG 480

Query: 481 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 540
           YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW
Sbjct: 481 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 540

Query: 541 QYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWL 600
           QYISGTLPD REFDRIDNPQ                       LEGYKFDPNGEYVRRWL
Sbjct: 541 QYISGTLPDSREFDRIDNPQ-----------------------LEGYKFDPNGEYVRRWL 600

Query: 601 PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA 660
           PELSRLPTEWIHHPWNAPESVLQAAG+ELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA
Sbjct: 601 PELSRLPTEWIHHPWNAPESVLQAAGVELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA 660

Query: 661 SRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSSV 720
           SRAAIENGTEEGLGDSSESIPIAFPQDIAM+EED+EPARMNAHTVRCYEDQMVPSMTSSV
Sbjct: 661 SRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARMNAHTVRCYEDQMVPSMTSSV 681

Query: 721 RLEDEPSLNIQSTAEDGRAEVPTNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAGIALRT 780
           RLEDE SLNIQSTAEDGRAEVPTNANL QEP RDAVNPR +PTAPTQTRRPYTAGIALRT
Sbjct: 721 RLEDESSLNIQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQTRRPYTAGIALRT 681

Query: 781 SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ 840
           SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ
Sbjct: 781 SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ 681

Query: 841 IINWRRLSQTG 852
           IINWRRLSQTG
Sbjct: 841 IINWRRLSQTG 681

[Close]

BLAST of Lsi04G022320 vs. ExPASy TrEMBL
Match: A0A1S3CS50 (cryptochrome-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503708 PE=3 SV=1)

HSP 1 Score: 1299.3 bits (3361), Expect = 0.0e+00
Identity = 663/851 (77.91%), Postives = 671/851 (78.85%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGTFLLTKRSTNTISALLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNA 180
           AQGI VRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRI+    
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIV---- 180

Query: 181 VKFESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKE 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 VSSDVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFY 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 RRHVLFLNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNA 360
                                  SGDASRCPCDTLVFEDESEKGSNALL+RAWSPGWSNA
Sbjct: 301 -----------------------SGDASRCPCDTLVFEDESEKGSNALLARAWSPGWSNA 360

Query: 361 DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN 420
           DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN
Sbjct: 361 DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN 420

Query: 421 KAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG 480
           KAG+ESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG
Sbjct: 421 KAGEESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG 480

Query: 481 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 540
           YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW
Sbjct: 481 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 540

Query: 541 QYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWL 600
           QYISGTLPD REFDRIDNPQ                       LEGYKFDPNGEYVRRWL
Sbjct: 541 QYISGTLPDSREFDRIDNPQ-----------------------LEGYKFDPNGEYVRRWL 600

Query: 601 PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA 660
           PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA
Sbjct: 601 PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA 660

Query: 661 SRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSSV 720
           SRAAIENGTEEGLGDSSESIPIAFPQDIAM+EED+EPAR+NAHTVRCYEDQMVPSMTSSV
Sbjct: 661 SRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARVNAHTVRCYEDQMVPSMTSSV 681

Query: 721 RLEDEPSLNIQSTAEDGRAEVPTNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAGIALRT 780
           RLEDE SLNIQSTAEDGRAEVPTNANL QEP RDAVNPR +PTAPTQTR PYTAGIALRT
Sbjct: 721 RLEDESSLNIQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQTRLPYTAGIALRT 681

Query: 781 SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ 840
           SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ
Sbjct: 781 SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ 681

Query: 841 IINWRRLSQTG 852
           IINWRRLSQTG
Sbjct: 841 IINWRRLSQTG 681

[Close]

BLAST of Lsi04G022320 vs. ExPASy TrEMBL
Match: A0A5D3E5Y8 (Cryptochrome-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006220 PE=3 SV=1)

HSP 1 Score: 1299.3 bits (3361), Expect = 0.0e+00
Identity = 663/851 (77.91%), Postives = 671/851 (78.85%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGTFLLTKRSTNTISALLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNA 180
           AQGI VRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRI+    
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIV---- 180

Query: 181 VKFESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKE 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 VSSDVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFY 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 RRHVLFLNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNA 360
                                  SGDASRCPCDTLVFEDESEKGSNALL+RAWSPGWSNA
Sbjct: 301 -----------------------SGDASRCPCDTLVFEDESEKGSNALLARAWSPGWSNA 360

Query: 361 DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN 420
           DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN
Sbjct: 361 DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN 420

Query: 421 KAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG 480
           KAG+ESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG
Sbjct: 421 KAGEESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG 480

Query: 481 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 540
           YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW
Sbjct: 481 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 540

Query: 541 QYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWL 600
           QYISGTLPD REFDRIDNPQ                       LEGYKFDPNGEYVRRWL
Sbjct: 541 QYISGTLPDSREFDRIDNPQ-----------------------LEGYKFDPNGEYVRRWL 600

Query: 601 PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA 660
           PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA
Sbjct: 601 PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA 660

Query: 661 SRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSSV 720
           SRAAIENGTEEGLGDSSESIPIAFPQDIAM+EED+EPAR+NAHTVRCYEDQMVPSMTSSV
Sbjct: 661 SRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARVNAHTVRCYEDQMVPSMTSSV 681

Query: 721 RLEDEPSLNIQSTAEDGRAEVPTNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAGIALRT 780
           RLEDE SLNIQSTAEDGRAEVPTNANL QEP RDAVNPR +PTAPTQTR PYTAGIALRT
Sbjct: 721 RLEDESSLNIQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQTRLPYTAGIALRT 681

Query: 781 SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ 840
           SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ
Sbjct: 781 SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ 681

Query: 841 IINWRRLSQTG 852
           IINWRRLSQTG
Sbjct: 841 IINWRRLSQTG 681

[Close]

BLAST of Lsi04G022320 vs. ExPASy TrEMBL
Match: A0A6J1IHZ1 (cryptochrome-1 OS=Cucurbita maxima OX=3661 GN=LOC111476454 PE=3 SV=1)

HSP 1 Score: 1266.5 bits (3276), Expect = 0.0e+00
Identity = 649/852 (76.17%), Postives = 663/852 (77.82%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPALTAAVR+GAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRSGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGTFL+TKRSTNTISALLDVVKATGASQLFFNHLYDPLSL+RDHRAKEVLS
Sbjct: 61  AHLDSSLRSLGTFLVTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLVRDHRAKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNA 180
           AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRII    
Sbjct: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRII---- 180

Query: 181 VKFESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKE 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 VSSDVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFY 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 RRHVLFLNIICLKRFTLHIVFAPSGDAS-RCPCDTLVFEDESEKGSNALLSRAWSPGWSN 360
                                  SGDAS RC CDTL+FEDESEKGSNALL+RAWSPGWSN
Sbjct: 301 -----------------------SGDASRRCQCDTLLFEDESEKGSNALLARAWSPGWSN 360

Query: 361 ADKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEG 420
           ADKALTTFINGPL+EYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEG
Sbjct: 361 ADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEG 420

Query: 421 NKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRT 480
           NKAG+ESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRT
Sbjct: 421 NKAGEESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRT 480

Query: 481 GYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALG 540
           GYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALG
Sbjct: 481 GYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALG 540

Query: 541 WQYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRW 600
           WQYISGTLPD REFDRIDNPQ                       LEGYK DP GEYVRRW
Sbjct: 541 WQYISGTLPDSREFDRIDNPQ-----------------------LEGYKCDPYGEYVRRW 600

Query: 601 LPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEA 660
           LPELSRLPTEWIHHPWNAPE VLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEA
Sbjct: 601 LPELSRLPTEWIHHPWNAPEYVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEA 660

Query: 661 ASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSS 720
           ASRAAIENGTEEGLGDSSESIPIAFPQ+I MEEED+EPARMNAHT+RCYEDQMVPSMTSS
Sbjct: 661 ASRAAIENGTEEGLGDSSESIPIAFPQEITMEEEDVEPARMNAHTIRCYEDQMVPSMTSS 682

Query: 721 VRLEDEPSLNIQSTAEDGRAEVPTNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAGIALR 780
           VRL DEPSLNIQSTAEDGRAEVP NANL QEPTR+ VNPRV PT PTQTR PYT GI L 
Sbjct: 721 VRLGDEPSLNIQSTAEDGRAEVPINANLNQEPTRNVVNPRVRPTNPTQTRLPYTPGIGLG 682

Query: 781 TSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTH 840
           T+ EDSTAES SSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQ+H
Sbjct: 781 TAAEDSTAESYSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQSH 682

Query: 841 QIINWRRLSQTG 852
           QIINWR+LSQTG
Sbjct: 841 QIINWRQLSQTG 682

[Close]

BLAST of Lsi04G022320 vs. ExPASy TrEMBL
Match: A0A6J1F880 (cryptochrome-1 OS=Cucurbita moschata OX=3662 GN=LOC111443215 PE=3 SV=1)

HSP 1 Score: 1261.9 bits (3264), Expect = 0.0e+00
Identity = 648/852 (76.06%), Postives = 662/852 (77.70%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPALTAAVR+GAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRSGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           A LDSSLRSLGTFL+TKRSTNTISALLDVVKATGASQLFFNHLYDPLSL+RDHRAKEVLS
Sbjct: 61  ALLDSSLRSLGTFLVTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLVRDHRAKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNA 180
           AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRII    
Sbjct: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRII---- 180

Query: 181 VKFESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKE 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 VSSDVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFY 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 RRHVLFLNIICLKRFTLHIVFAPSGDAS-RCPCDTLVFEDESEKGSNALLSRAWSPGWSN 360
                                  SGDAS RCPCDTLVFEDESEKGSNALL+RAWSPGWSN
Sbjct: 301 -----------------------SGDASRRCPCDTLVFEDESEKGSNALLARAWSPGWSN 360

Query: 361 ADKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEG 420
           ADKALTTFINGPL+EYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEG
Sbjct: 361 ADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEG 420

Query: 421 NKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRT 480
           N+AG+ESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRT
Sbjct: 421 NEAGEESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRT 480

Query: 481 GYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALG 540
           GYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALG
Sbjct: 481 GYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALG 540

Query: 541 WQYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRW 600
           WQYISGTLPD REFDRIDNPQ                       LEGYK DP GEYVRRW
Sbjct: 541 WQYISGTLPDSREFDRIDNPQ-----------------------LEGYKCDPYGEYVRRW 600

Query: 601 LPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEA 660
           LPELSRLPTEWIHHPWNAPE VLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEA
Sbjct: 601 LPELSRLPTEWIHHPWNAPEYVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEA 660

Query: 661 ASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSS 720
           ASRAAIENGTEEGLGDSSESIPIAFPQ+I MEEED+EPARMNAHT+RCYEDQMVPSMTSS
Sbjct: 661 ASRAAIENGTEEGLGDSSESIPIAFPQEITMEEEDVEPARMNAHTIRCYEDQMVPSMTSS 682

Query: 721 VRLEDEPSLNIQSTAEDGRAEVPTNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAGIALR 780
           VRL DEPSLNIQSTAEDGRAEVP NANL QE TR+ VNPRV P  PTQTR PYT GI LR
Sbjct: 721 VRLGDEPSLNIQSTAEDGRAEVPINANLNQELTRNVVNPRVRPNDPTQTRLPYTPGIGLR 682

Query: 781 TSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTH 840
           T+ EDSTAES SSSDVRRERDGGVVPVWSPPSSSYTEQFVV+ENGIGTSSSFLQGHQQ+H
Sbjct: 781 TAAEDSTAESYSSSDVRRERDGGVVPVWSPPSSSYTEQFVVEENGIGTSSSFLQGHQQSH 682

Query: 841 QIINWRRLSQTG 852
           QIINWRRLSQTG
Sbjct: 841 QIINWRRLSQTG 682

[Close]

BLAST of Lsi04G022320 vs. NCBI nr
Match: XP_038897472.1 (cryptochrome-1 isoform X1 [Benincasa hispida] >XP_038897473.1 cryptochrome-1 isoform X2 [Benincasa hispida])

HSP 1 Score: 1314.7 bits (3401), Expect = 0.0e+00
Identity = 672/851 (78.97%), Postives = 676/851 (79.44%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGAS LFFNHLYDPLSLIRDHRAKEVLS
Sbjct: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASHLFFNHLYDPLSLIRDHRAKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNA 180
           AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRII    
Sbjct: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRII---- 180

Query: 181 VKFESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKE 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 VSSDVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFY 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 RRHVLFLNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNA 360
                                  SGDASRCPCDTLVFEDESEKGSNALL+RAWSPGWSNA
Sbjct: 301 -----------------------SGDASRCPCDTLVFEDESEKGSNALLARAWSPGWSNA 360

Query: 361 DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN 420
           DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN
Sbjct: 361 DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN 420

Query: 421 KAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG 480
           KAG+ESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG
Sbjct: 421 KAGEESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG 480

Query: 481 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 540
           YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW
Sbjct: 481 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 540

Query: 541 QYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWL 600
           QYISGTLPD REFDRIDNPQ                       LEGYKFDPNGEYVRRWL
Sbjct: 541 QYISGTLPDSREFDRIDNPQ-----------------------LEGYKFDPNGEYVRRWL 600

Query: 601 PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA 660
           PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPI+GLDAAKARLEEALSEMWQQEAA
Sbjct: 601 PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIIGLDAAKARLEEALSEMWQQEAA 660

Query: 661 SRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSSV 720
           SRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPAR+NAHTVRCYEDQMVPSMTSSV
Sbjct: 661 SRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARINAHTVRCYEDQMVPSMTSSV 681

Query: 721 RLEDEPSLNIQSTAEDGRAEVPTNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAGIALRT 780
           RLEDEPSLNIQSTAEDGRAEVPTNANL QEPTRDAVNPR LPTAPTQTR PYTAGIALRT
Sbjct: 721 RLEDEPSLNIQSTAEDGRAEVPTNANLPQEPTRDAVNPRALPTAPTQTRHPYTAGIALRT 681

Query: 781 SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ 840
           SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ
Sbjct: 781 SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ 681

Query: 841 IINWRRLSQTG 852
           IINWRRLSQTG
Sbjct: 841 IINWRRLSQTG 681

[Close]

BLAST of Lsi04G022320 vs. NCBI nr
Match: XP_004136290.1 (cryptochrome-1 isoform X2 [Cucumis sativus] >XP_011652550.1 cryptochrome-1 isoform X1 [Cucumis sativus])

HSP 1 Score: 1300.8 bits (3365), Expect = 0.0e+00
Identity = 663/851 (77.91%), Postives = 671/851 (78.85%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVV VFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVVVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGT+LLTKRSTNTISALLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTYLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNA 180
           AQGI VRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRII    
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRII---- 180

Query: 181 VKFESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKE 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 VSSDVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFY 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 RRHVLFLNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNA 360
                                  SGDASRCPCDTLVFEDESEKGSNALL+RAWSPGWSNA
Sbjct: 301 -----------------------SGDASRCPCDTLVFEDESEKGSNALLARAWSPGWSNA 360

Query: 361 DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN 420
           DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN
Sbjct: 361 DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN 420

Query: 421 KAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG 480
           KAG+ESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG
Sbjct: 421 KAGEESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG 480

Query: 481 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 540
           YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW
Sbjct: 481 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 540

Query: 541 QYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWL 600
           QYISGTLPD REFDRIDNPQ                       LEGYKFDPNGEYVRRWL
Sbjct: 541 QYISGTLPDSREFDRIDNPQ-----------------------LEGYKFDPNGEYVRRWL 600

Query: 601 PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA 660
           PELSRLPTEWIHHPWNAPESVLQAAG+ELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA
Sbjct: 601 PELSRLPTEWIHHPWNAPESVLQAAGVELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA 660

Query: 661 SRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSSV 720
           SRAAIENGTEEGLGDSSESIPIAFPQDIAM+EED+EPARMNAHTVRCYEDQMVPSMTSSV
Sbjct: 661 SRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARMNAHTVRCYEDQMVPSMTSSV 681

Query: 721 RLEDEPSLNIQSTAEDGRAEVPTNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAGIALRT 780
           RLEDE SLNIQSTAEDGRAEVPTNANL QEP RDAVNPR +PTAPTQTRRPYTAGIALRT
Sbjct: 721 RLEDESSLNIQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQTRRPYTAGIALRT 681

Query: 781 SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ 840
           SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ
Sbjct: 781 SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ 681

Query: 841 IINWRRLSQTG 852
           IINWRRLSQTG
Sbjct: 841 IINWRRLSQTG 681

[Close]

BLAST of Lsi04G022320 vs. NCBI nr
Match: XP_008466232.1 (PREDICTED: cryptochrome-1 isoform X1 [Cucumis melo] >XP_008466233.1 PREDICTED: cryptochrome-1 isoform X2 [Cucumis melo] >KAA0038710.1 cryptochrome-1 isoform X1 [Cucumis melo var. makuwa] >TYK31322.1 cryptochrome-1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1299.3 bits (3361), Expect = 0.0e+00
Identity = 663/851 (77.91%), Postives = 671/851 (78.85%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLR+EDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGTFLLTKRSTNTISALLDV KATGAS LFFNHLYDPLSLIRDHR KEVLS
Sbjct: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNA 180
           AQGI VRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRI+    
Sbjct: 121 AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIV---- 180

Query: 181 VKFESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKE 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 VSSDVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFY 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 RRHVLFLNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNA 360
                                  SGDASRCPCDTLVFEDESEKGSNALL+RAWSPGWSNA
Sbjct: 301 -----------------------SGDASRCPCDTLVFEDESEKGSNALLARAWSPGWSNA 360

Query: 361 DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN 420
           DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN
Sbjct: 361 DKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGN 420

Query: 421 KAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG 480
           KAG+ESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG
Sbjct: 421 KAGEESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTG 480

Query: 481 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 540
           YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW
Sbjct: 481 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 540

Query: 541 QYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWL 600
           QYISGTLPD REFDRIDNPQ                       LEGYKFDPNGEYVRRWL
Sbjct: 541 QYISGTLPDSREFDRIDNPQ-----------------------LEGYKFDPNGEYVRRWL 600

Query: 601 PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA 660
           PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA
Sbjct: 601 PELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAA 660

Query: 661 SRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSSV 720
           SRAAIENGTEEGLGDSSESIPIAFPQDIAM+EED+EPAR+NAHTVRCYEDQMVPSMTSSV
Sbjct: 661 SRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARVNAHTVRCYEDQMVPSMTSSV 681

Query: 721 RLEDEPSLNIQSTAEDGRAEVPTNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAGIALRT 780
           RLEDE SLNIQSTAEDGRAEVPTNANL QEP RDAVNPR +PTAPTQTR PYTAGIALRT
Sbjct: 721 RLEDESSLNIQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQTRLPYTAGIALRT 681

Query: 781 SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ 840
           SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ
Sbjct: 781 SVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTHQ 681

Query: 841 IINWRRLSQTG 852
           IINWRRLSQTG
Sbjct: 841 IINWRRLSQTG 681

[Close]

BLAST of Lsi04G022320 vs. NCBI nr
Match: KAG7024545.1 (Cryptochrome-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1288.9 bits (3334), Expect = 0.0e+00
Identity = 660/852 (77.46%), Postives = 681/852 (79.93%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPALTAAVR+GAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRSGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           A LDSSLRSLGTFL+TKRSTNTISALLDVVKATGASQLFFNHLYDPLSL+RDHRAKEVLS
Sbjct: 61  ALLDSSLRSLGTFLVTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLVRDHRAKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNA 180
           AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIIS   
Sbjct: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIIS--- 180

Query: 181 VKFESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKE 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 VSSDVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFY 300
                         C+F HL                                     +  
Sbjct: 241 -------------GCLFYHL-------------------------------------VQQ 300

Query: 301 RRHVLFLNIICLKRFTLHIVFAPSGDAS-RCPCDTLVFEDESEKGSNALLSRAWSPGWSN 360
           R+  +  ++        +IVFAPSGDAS RCPCDTLVFEDESEKGSNALL+RAWSPGWSN
Sbjct: 301 RKRSIDFSL-------CYIVFAPSGDASRRCPCDTLVFEDESEKGSNALLARAWSPGWSN 360

Query: 361 ADKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEG 420
           ADKALTTFINGPL+EYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEG
Sbjct: 361 ADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEG 420

Query: 421 NKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRT 480
           N+AG+ESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRT
Sbjct: 421 NEAGEESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRT 480

Query: 481 GYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALG 540
           GYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALG
Sbjct: 481 GYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALG 540

Query: 541 WQYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRW 600
           WQYISGTLPD REFDRIDNPQ                       LEGYK DP GEYVRRW
Sbjct: 541 WQYISGTLPDSREFDRIDNPQ-----------------------LEGYKCDPYGEYVRRW 600

Query: 601 LPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEA 660
           LPELSRLPTEWIHHPWNAPE VLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEA
Sbjct: 601 LPELSRLPTEWIHHPWNAPEYVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEA 660

Query: 661 ASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSS 720
           ASRAAIENGTEEGLGDSSESIP+AFPQ+I MEEED+EPARMNAHT+RCYEDQMVPSMTSS
Sbjct: 661 ASRAAIENGTEEGLGDSSESIPMAFPQEITMEEEDVEPARMNAHTIRCYEDQMVPSMTSS 709

Query: 721 VRLEDEPSLNIQSTAEDGRAEVPTNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAGIALR 780
           VRL DEPSLNIQSTAEDGR EVP NANL QEPTR+ VNPRV PT PTQTR PYT GI LR
Sbjct: 721 VRLGDEPSLNIQSTAEDGRGEVPINANLNQEPTRNVVNPRVRPTDPTQTRLPYTPGIGLR 709

Query: 781 TSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTH 840
           T+ EDSTAES SSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQ+H
Sbjct: 781 TAAEDSTAESYSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQSH 709

Query: 841 QIINWRRLSQTG 852
           QIINWRRLSQTG
Sbjct: 841 QIINWRRLSQTG 709

[Close]

BLAST of Lsi04G022320 vs. NCBI nr
Match: XP_022975880.1 (cryptochrome-1 [Cucurbita maxima])

HSP 1 Score: 1266.5 bits (3276), Expect = 0.0e+00
Identity = 649/852 (76.17%), Postives = 663/852 (77.82%), Query Frame = 0


Query: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60
           MSGGGCSIVWFRRDLRVEDNPALTAAVR+GAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL
Sbjct: 1   MSGGGCSIVWFRRDLRVEDNPALTAAVRSGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSL 60

Query: 61  AHLDSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLS 120
           AHLDSSLRSLGTFL+TKRSTNTISALLDVVKATGASQLFFNHLYDPLSL+RDHRAKEVLS
Sbjct: 61  AHLDSSLRSLGTFLVTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLVRDHRAKEVLS 120

Query: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNA 180
           AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRII    
Sbjct: 121 AQGIGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRII---- 180

Query: 181 VKFESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKE 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 VSSDVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFY 300
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 301 RRHVLFLNIICLKRFTLHIVFAPSGDAS-RCPCDTLVFEDESEKGSNALLSRAWSPGWSN 360
                                  SGDAS RC CDTL+FEDESEKGSNALL+RAWSPGWSN
Sbjct: 301 -----------------------SGDASRRCQCDTLLFEDESEKGSNALLARAWSPGWSN 360

Query: 361 ADKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEG 420
           ADKALTTFINGPL+EYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEG
Sbjct: 361 ADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEG 420

Query: 421 NKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRT 480
           NKAG+ESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRT
Sbjct: 421 NKAGEESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRT 480

Query: 481 GYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALG 540
           GYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALG
Sbjct: 481 GYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALG 540

Query: 541 WQYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRW 600
           WQYISGTLPD REFDRIDNPQ                       LEGYK DP GEYVRRW
Sbjct: 541 WQYISGTLPDSREFDRIDNPQ-----------------------LEGYKCDPYGEYVRRW 600

Query: 601 LPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEA 660
           LPELSRLPTEWIHHPWNAPE VLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEA
Sbjct: 601 LPELSRLPTEWIHHPWNAPEYVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEA 660

Query: 661 ASRAAIENGTEEGLGDSSESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSS 720
           ASRAAIENGTEEGLGDSSESIPIAFPQ+I MEEED+EPARMNAHT+RCYEDQMVPSMTSS
Sbjct: 661 ASRAAIENGTEEGLGDSSESIPIAFPQEITMEEEDVEPARMNAHTIRCYEDQMVPSMTSS 682

Query: 721 VRLEDEPSLNIQSTAEDGRAEVPTNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAGIALR 780
           VRL DEPSLNIQSTAEDGRAEVP NANL QEPTR+ VNPRV PT PTQTR PYT GI L 
Sbjct: 721 VRLGDEPSLNIQSTAEDGRAEVPINANLNQEPTRNVVNPRVRPTNPTQTRLPYTPGIGLG 682

Query: 781 TSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQTH 840
           T+ EDSTAES SSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQ+H
Sbjct: 781 TAAEDSTAESYSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSSFLQGHQQSH 682

Query: 841 QIINWRRLSQTG 852
           QIINWR+LSQTG
Sbjct: 841 QIINWRQLSQTG 682

[Close]

BLAST of Lsi04G022320 vs. TAIR 10
Match: AT4G08920.1 (cryptochrome 1 )

HSP 1 Score: 1008.8 bits (2607), Expect = 2.5e-294
Identity = 536/859 (62.40%), Postives = 591/859 (68.80%), Query Frame = 0


Query: 4   GGCSIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHL 63
           GGCSIVWFRRDLRVEDNPAL AAVRAG V+A+F+WAPEEEGHY+PGRVSRWWLK SLA L
Sbjct: 11  GGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQL 70

Query: 64  DSSLRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQG 123
           DSSLRSLGT L+TKRST+++++LLDVVK+TGASQ+FFNHLYDPLSL+RDHRAK+VL+AQG
Sbjct: 71  DSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQG 130

Query: 124 IGVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNAVKF 183
           I VRS+NADLLYEPW+V D  G PF+ FA FWERCLSMP DPE+PLLPPK+II       
Sbjct: 131 IAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKII------- 190

Query: 184 ESKLLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKEVSS 243
                                                                       
Sbjct: 191 ------------------------------------------------------------ 250

Query: 244 DVDGLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFYRRH 303
                                                                       
Sbjct: 251 ------------------------------------------------------------ 310

Query: 304 VLFLNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNADKA 363
                               SGD S+C  D LVFED+SEKGSNALL+RAWSPGWSN DKA
Sbjct: 311 --------------------SGDVSKCVADPLVFEDDSEKGSNALLARAWSPGWSNGDKA 370

Query: 364 LTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAG 423
           LTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVR+KQV WANEGN+AG
Sbjct: 371 LTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAG 430

Query: 424 DESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPL 483
           +ESVNLFLKSIGLREYSRY+SFNHPYSHERPLLGHLKFFPW VDE YFKAWRQGRTGYPL
Sbjct: 431 EESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPL 490

Query: 484 VDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 543
           VDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI
Sbjct: 491 VDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI 550

Query: 544 SGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWLPEL 603
           +GTLPD REFDRIDNPQ                        EGYKFDPNGEYVRRWLPEL
Sbjct: 551 TGTLPDSREFDRIDNPQ-----------------------FEGYKFDPNGEYVRRWLPEL 610

Query: 604 SRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAASRA 663
           SRLPT+WIHHPWNAPESVLQAAGIELGSNYPLPIVGLD AKARL EALS+MWQ EAASRA
Sbjct: 611 SRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQMWQLEAASRA 670

Query: 664 AIENGTEEGLGDSS--ESIPIAFPQDIAMEEEDLEPARMNAHTVRCYEDQMVPSMTSSV- 723
           AIENG+EEGLGDS+  E  PI FP+DI MEE   EP R+N +  R YEDQMVPS+TSS+ 
Sbjct: 671 AIENGSEEGLGDSAEVEEAPIEFPRDITMEE--TEPTRLNPN--RRYEDQMVPSITSSLI 681

Query: 724 --RLEDEPSLNIQSTAEDGRAEVP---TNANLLQEPTRDAVNPRVLPTAPTQTRRPYTAG 783
               ++E SLN++++  D RAEVP    N N  Q+   +  + +V    P    R     
Sbjct: 731 RPEEDEESSLNLRNSVGDSRAEVPRNMVNTNQAQQRRAEPASNQVTAMIPEFNIR----- 681

Query: 784 IALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIG---TSSSFL 843
             +  S EDSTAESSSS   RRER GG+VP WSP    Y+EQF  +ENGIG   T+SS+L
Sbjct: 791 -IVAESTEDSTAESSSSG--RRERSGGIVPEWSP---GYSEQFPSEENGIGGGSTTSSYL 681

Query: 844 QGHQQTHQIINWRRLSQTG 852
           Q H   H+I+NWRRLSQTG
Sbjct: 851 QNH---HEILNWRRLSQTG 681

[Close]

BLAST of Lsi04G022320 vs. TAIR 10
Match: AT1G04400.2 (cryptochrome 2 )

HSP 1 Score: 607.4 bits (1565), Expect = 1.7e-173
Identity = 310/674 (45.99%), Postives = 391/674 (58.01%), Query Frame = 0


Query: 7   SIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSS 66
           +IVWFRRDLR+EDNPAL AA   G+V  VFIW PEEEG +YPGR SRWW+KQSLAHL  S
Sbjct: 7   TIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLSQS 66

Query: 67  LRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGV 126
           L++LG+ L   ++ NTISA+LD ++ TGA+++ FNHLYDP+SL+RDH  KE L  +GI V
Sbjct: 67  LKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGISV 126

Query: 127 RSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNAVKFESK 186
           +SYN DLLYEPW++    G PFT+F  +W++CL M  +    L PP R++ + A      
Sbjct: 127 QSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSIE-SVMLPPPWRLMPITA------ 186

Query: 187 LLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKEVSSDVD 246
                                                  A+E +                
Sbjct: 187 ---------------------------------------AAEAIWA-------------- 246

Query: 247 GLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFYRRHVLF 306
                                                                       
Sbjct: 247 ------------------------------------------------------------ 306

Query: 307 LNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNADKALTT 366
                                  C  + L  E+E+EK SNALL+RAWSPGWSNADK L  
Sbjct: 307 -----------------------CSIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNE 366

Query: 367 FINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDES 426
           FI   L++Y+KN +K    +TS LSP+LHFGE+SVR VF   RMKQ++WA + N  G+ES
Sbjct: 367 FIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEES 426

Query: 427 VNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDA 486
            +LFL+ IGLREYSRY+ FN P++HE+ LL HL+FFPW  D   FKAWRQGRTGYPLVDA
Sbjct: 427 ADLFLRGIGLREYSRYICFNFPFTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDA 486

Query: 487 GMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGT 546
           GMRELWATGW+H+RIRV+VSSF VK L LPW+WGMKYFWDTLLDADLE D LGWQYISG+
Sbjct: 487 GMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGS 510

Query: 547 LPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWLPELSRL 606
           +PDG E DR+DNP LQ                       G K+DP GEY+R+WLPEL+RL
Sbjct: 547 IPDGHELDRLDNPALQ-----------------------GAKYDPEGEYIRQWLPELARL 510

Query: 607 PTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAASRAAIE 666
           PTEWIHHPW+AP +VL+A+G+ELG+NY  PIV +D A+  L +A+S   + +    AA  
Sbjct: 607 PTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAISRTREAQIMIGAA-- 510

Query: 667 NGTEEGLGDSSESI 681
              +E + DS E++
Sbjct: 667 --PDEIVADSFEAL 510

[Close]

BLAST of Lsi04G022320 vs. TAIR 10
Match: AT1G04400.1 (cryptochrome 2 )

HSP 1 Score: 607.4 bits (1565), Expect = 1.7e-173
Identity = 310/674 (45.99%), Postives = 391/674 (58.01%), Query Frame = 0


Query: 7   SIVWFRRDLRVEDNPALTAAVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLAHLDSS 66
           +IVWFRRDLR+EDNPAL AA   G+V  VFIW PEEEG +YPGR SRWW+KQSLAHL  S
Sbjct: 7   TIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLSQS 66

Query: 67  LRSLGTFLLTKRSTNTISALLDVVKATGASQLFFNHLYDPLSLIRDHRAKEVLSAQGIGV 126
           L++LG+ L   ++ NTISA+LD ++ TGA+++ FNHLYDP+SL+RDH  KE L  +GI V
Sbjct: 67  LKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGISV 126

Query: 127 RSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISVNAVKFESK 186
           +SYN DLLYEPW++    G PFT+F  +W++CL M  +    L PP R++ + A      
Sbjct: 127 QSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSIE-SVMLPPPWRLMPITA------ 186

Query: 187 LLLLSHNWWKTETIILPTHDFTLLYDYMRESGHPTLMLFASEMVTCKLVDHEKEVSSDVD 246
                                                  A+E +                
Sbjct: 187 ---------------------------------------AAEAIWA-------------- 246

Query: 247 GLAVEINHCIFSHLKYVLAVHSLFLFYLNGKLLGNEAFCGNFNFLPIYCLYLFYRRHVLF 306
                                                                       
Sbjct: 247 ------------------------------------------------------------ 306

Query: 307 LNIICLKRFTLHIVFAPSGDASRCPCDTLVFEDESEKGSNALLSRAWSPGWSNADKALTT 366
                                  C  + L  E+E+EK SNALL+RAWSPGWSNADK L  
Sbjct: 307 -----------------------CSIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNE 366

Query: 367 FINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDES 426
           FI   L++Y+KN +K    +TS LSP+LHFGE+SVR VF   RMKQ++WA + N  G+ES
Sbjct: 367 FIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEES 426

Query: 427 VNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDA 486
            +LFL+ IGLREYSRY+ FN P++HE+ LL HL+FFPW  D   FKAWRQGRTGYPLVDA
Sbjct: 427 ADLFLRGIGLREYSRYICFNFPFTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDA 486

Query: 487 GMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGT 546
           GMRELWATGW+H+RIRV+VSSF VK L LPW+WGMKYFWDTLLDADLE D LGWQYISG+
Sbjct: 487 GMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGS 510

Query: 547 LPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWLPELSRL 606
           +PDG E DR+DNP LQ                       G K+DP GEY+R+WLPEL+RL
Sbjct: 547 IPDGHELDRLDNPALQ-----------------------GAKYDPEGEYIRQWLPELARL 510

Query: 607 PTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAAKARLEEALSEMWQQEAASRAAIE 666
           PTEWIHHPW+AP +VL+A+G+ELG+NY  PIV +D A+  L +A+S   + +    AA  
Sbjct: 607 PTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAISRTREAQIMIGAA-- 510

Query: 667 NGTEEGLGDSSESI 681
              +E + DS E++
Sbjct: 667 --PDEIVADSFEAL 510

[Close]

BLAST of Lsi04G022320 vs. TAIR 10
Match: AT3G15620.1 (DNA photolyase family protein )

HSP 1 Score: 120.9 bits (302), Expect = 4.8e-27
Identity = 90/312 (28.85%), Postives = 139/312 (44.55%), Query Frame = 0


Query: 353 WSP---GWSNADKALTTFINGPLLEYSKNRRKADSA-----TTSFLSPHLHFGEVSVRKV 412
           W+P   G S A K LT  I+      +  + K D +      T+ +SP+L FG +S R  
Sbjct: 234 WTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPATTVMSPYLKFGCLSSRYF 293

Query: 413 FHLVRMKQVLWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPW 472
           +  +   Q ++  +  K     V+L L  +  RE+    +F  P   +       K  PW
Sbjct: 294 YQCL---QNIY-KDVKKHTSPPVSL-LGQLLWREFFYTTAFGTPNFDKMKGNRICKQIPW 353

Query: 473 VVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKY 532
             D     AWR G+TGYP +DA M +L   GW+H   R  V+ F  +  L + W  G   
Sbjct: 354 NEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIHWEQGRDV 413

Query: 533 FWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQLQLYPLQLTRLESSICLLMLLYD 592
           F   L+D+D   +   W ++S                   +  Q  R+ S I        
Sbjct: 414 FERLLIDSDWAINNGNWMWLS----------------CSSFFYQFNRIYSPISF------ 473

Query: 593 LEGYKFDPNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDAA 652
             G K+DP+G+Y+R +LP L  +P ++I+ PW AP SV   A   +G +YP P+V  D+A
Sbjct: 474 --GKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSA 516

Query: 653 KARLEEALSEMW 656
               +  + E +
Sbjct: 534 SKECKRKMGEAY 516

[Close]

BLAST of Lsi04G022320 vs. TAIR 10
Match: AT5G24850.1 (cryptochrome 3 )

HSP 1 Score: 109.0 bits (271), Expect = 1.9e-23
Identity = 77/244 (31.56%), Postives = 110/244 (45.08%), Query Frame = 0


Query: 376 SKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGDESVNLFLKSIG 435
           ++N       +T F SP L FG +S R ++  V+        E  +  + S    L  + 
Sbjct: 276 TRNGMLGPDYSTKF-SPWLAFGCISPRFIYEEVQ------RYEKERVANNSTYWVLFELI 335

Query: 436 LREYSRYMSFNHPYSHERPLLGHL-----KFFPWVVDEGYFKAWRQGRTGYPLVDAGMRE 495
            R+Y R++S     S     L HL         W  D+  F++WR  +TGYPL+DA M+E
Sbjct: 336 WRDYFRFLSIKCGNS-----LFHLGGPRNVQGKWSQDQKLFESWRDAKTGYPLIDANMKE 395

Query: 496 LWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDG 555
           L  TG++ +R R +V SF V+ + L WR G ++F   LLD D  S+   W Y +G   D 
Sbjct: 396 LSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDP 455

Query: 556 REFDRIDNPQLQLYPLQLTRLESSICLLMLLYDLEGYKFDPNGEYVRRWLPELSRLPTEW 615
           RE      P+                        +   +DP GEYV  WL +L RLP E 
Sbjct: 456 REDRYFSIPK------------------------QAQNYDPEGEYVAFWLQQLRRLPKEK 483

The following BLAST results are available for this feature:

BLAST of Lsi04G022320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43125	3.6e-293	62.40	Cryptochrome-1 OS=Arabidopsis thaliana OX=3702 GN=CRY1 PE=1 SV=2	[more]
Q96524	2.4e-172	45.99	Cryptochrome-2 OS=Arabidopsis thaliana OX=3702 GN=CRY2 PE=1 SV=2	[more]
P40115	1.6e-160	46.02	Cryptochrome-1 OS=Sinapis alba OX=3728 GN=PHR1 PE=2 SV=1	[more]
A9CJC9	4.8e-72	31.11	Deoxyribodipyrimidine photo-lyase OS=Agrobacterium fabrum (strain C58 / ATCC 339...	[more]
P12768	3.0e-42	34.81	Deoxyribodipyrimidine photo-lyase OS=Streptomyces griseus OX=1911 GN=phr PE=3 SV...	[more]

BLAST of Lsi04G022320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDY1	0.0e+00	77.91	Photolyase/cryptochrome alpha/beta domain-containing protein OS=Cucumis sativus ...	[more]
A0A1S3CS50	0.0e+00	77.91	cryptochrome-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503708 PE=3 SV=1	[more]
A0A5D3E5Y8	0.0e+00	77.91	Cryptochrome-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1IHZ1	0.0e+00	76.17	cryptochrome-1 OS=Cucurbita maxima OX=3661 GN=LOC111476454 PE=3 SV=1	[more]
A0A6J1F880	0.0e+00	76.06	cryptochrome-1 OS=Cucurbita moschata OX=3662 GN=LOC111443215 PE=3 SV=1	[more]

BLAST of Lsi04G022320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897472.1	0.0e+00	78.97	cryptochrome-1 isoform X1 [Benincasa hispida] >XP_038897473.1 cryptochrome-1 iso...	[more]
XP_004136290.1	0.0e+00	77.91	cryptochrome-1 isoform X2 [Cucumis sativus] >XP_011652550.1 cryptochrome-1 isofo...	[more]
XP_008466232.1	0.0e+00	77.91	PREDICTED: cryptochrome-1 isoform X1 [Cucumis melo] >XP_008466233.1 PREDICTED: c...	[more]
KAG7024545.1	0.0e+00	77.46	Cryptochrome-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022975880.1	0.0e+00	76.17	cryptochrome-1 [Cucurbita maxima]	[more]

BLAST of Lsi04G022320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08920.1	2.5e-294	62.40	cryptochrome 1	[more]
AT1G04400.2	1.7e-173	45.99	cryptochrome 2	[more]
AT1G04400.1	1.7e-173	45.99	cryptochrome 2	[more]
AT3G15620.1	4.8e-27	28.85	DNA photolyase family protein	[more]
AT5G24850.1	1.9e-23	31.56	cryptochrome 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 640..660
None	No IPR available	GENE3D	1.25.40.80		coord: 334..447 e-value: 1.4E-21 score: 79.3
None	No IPR available	GENE3D	1.10.579.10	DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3	coord: 448..672 e-value: 1.9E-75 score: 254.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 761..789
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 731..811
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 731..751
None	No IPR available	PANTHER	PTHR11455:SF50	CRYPTOCHROME-1	coord: 324..773 coord: 1..193
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 1..159 e-value: 9.0E-43 score: 147.9
IPR006050	DNA photolyase, N-terminal	PFAM	PF00875	DNA_photolyase	coord: 7..161 e-value: 1.8E-38 score: 132.1
IPR006050	DNA photolyase, N-terminal	PROSITE	PS51645	PHR_CRY_ALPHA_BETA	coord: 5..134 score: 34.034527
IPR005101	Cryptochrome/DNA photolyase, FAD-binding domain	PFAM	PF03441	FAD_binding_7	coord: 586..651 e-value: 6.8E-16 score: 58.4 coord: 430..562 e-value: 1.2E-39 score: 135.9
IPR020978	Cryptochrome C-terminal	PFAM	PF12546	Cryptochrome_C	coord: 681..793 e-value: 2.7E-27 score: 95.7
IPR002081	Cryptochrome/DNA photolyase class 1	PANTHER	PTHR11455	CRYPTOCHROME	coord: 324..773 coord: 1..193
IPR018394	Cryptochrome/DNA photolyase class 1, conserved site, C-terminal	PROSITE	PS00691	DNA_PHOTOLYASES_1_2	coord: 499..518
IPR018394	Cryptochrome/DNA photolyase class 1, conserved site, C-terminal	PROSITE	PS00394	DNA_PHOTOLYASES_1_1	coord: 479..491
IPR036134	Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily	SUPERFAMILY	48173	Cryptochrome/photolyase FAD-binding domain	coord: 339..658
IPR036155	Cryptochrome/photolyase, N-terminal domain superfamily	SUPERFAMILY	52425	Cryptochrome/photolyase, N-terminal domain	coord: 7..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G022320.1	Lsi04G022320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009785	blue light signaling pathway
biological_process	GO:0032922	circadian regulation of gene expression
biological_process	GO:0043153	entrainment of circadian clock by photoperiod
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0006950	response to stress
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0009882	blue light photoreceptor activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0071949	FAD binding