Lsi04G021750 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G021750
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function (DUF1218)
Location	chr04: 28832653 .. 28836722 (+)
RNA-Seq Expression	Lsi04G021750
Synteny	Lsi04G021750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAGCTAAAGCATATATAGCTAAGCACCACACAAATTGACTCTCACTCGTCAGTTTCGCCTTCATTCCGAAACAAGCTCTTCTTCATTTTCTTCTTCATTTCTCCCTTCAGGTTTCCCTGCATTTTCCAAATAATTTCTCTCAATTTTCAACCGCTTCTTCTTTGCCCTAGAGAAATCGAAGGTATACAGTTCTTGTTTAAGGCTTTGTAAACAATTATTCAACGTTTGTTTGTTTGTTTCTTTGAACGATCGTGATTTCTGTGCTGGTGTTAATACCAGGAGAAGTTTTCATTGGATTATTCCACTGTCGATTGTGTTTGTTTATGAATTTCGATAGCTTTTTGGAGTATCGTGATTCTCTTCTCGCTACAGATTATGTGCATATTGTTAAATTAATTTGTTGAATCCTTTTTGGTTTAGCGGCAAAATATGTTTTTCGAGAAATTGTTTGATTTGGGGATTTGTGTGATAATGCTAGGGTTGGAATGGAACGTTTTGATGTTTTGTTTACACTCTCTGTTTATTTAATTTAGGTTGAATTTTGTATACGAAGTACTCATTGAACTTTAATCTTTGTTTTGAAAATACTCGTATTACCTCTTGACCTATTTTTCAAAACTAGAGTAGAAATCCTTGGCAGTTTTGATTTGATTGTTAACCTTTATGAAAGTTTAGGGACTAAATTTTATTTTATAAATTCTGTAAAATAAGAAAAAGTAACAAGAAAACTATTAAATCTCTTTTTGTTATTCCTTTTGCAATCATAACTCATTCTAGTAGTTATGCCTCCCTTCCTAACTTTAGCATATTTTATCGTTTAATCATCACTTCTAAGATATCATTTTATTCCCTGTATAGGTCACTGGTAACACTTATCTAGAGAACAATGGCTGTTTCTGTTAAGTTGATGGCTCTTACTGTTGGAACTTTCGGTGTCATATCCTTTATATTTGGAGTCGTTGCTGAAAACAAGAAGGTAAGCATCTCTAATCATTATAAACAAGCATATCATCTTGGCACTTGTTCAATTTTTACTGTAGATATCTGTTCATTTGAGATTGTCAACAGCAAGAATGAAAATATTGATGAATAGTTTTGTTCTCCCTTTGTCTCACTTATAGTATATCGCACCTTGCTTGGACCTTATTATTAGGGAGTGTTAAAGTTTGTTTTCTAATGTTTTATATAAACGATCCTTCAATCCTAAAAATAGAGGAGGACAAGCTAGAGAAAAACAACTATATCTTTTTAAGTATTTTATATCAATTATGGGAATATCTTAGTAAAACAAATTATTTATTACTCTTCCCCGACCTTTTACAAATCTCAAATTTATTGTTCCATAATTTAAAGCTTTTTCACATCTATTCTCTTTTGATTGATTCAATTTTTTATAACAATTCTTTTTTTTAGACTTTTATCAAATAATTTAGATTAAACAAAATTGGATGTAATTTAAATCACATAAAATTTTTAATAATTAGATTAGAATAAATTACAAATTTAAGTTATGAAGATAATAAATCTACTTTGGTTTATATGACAAAATCACTCCAATCTAGTAGTAATTGCATTTTGCCAAACACTGTAACTTGTTTTTTCCAATTTAAAATTAAAATTTACCAAAAACTAATACGTGACAATTGTATATTTTATGTGCATCTGGTTGCAAACTCAAGGGTATGCTCGTGTTTAATTTTATTTAGCATGCACTCTCTCTGTCTATTCGAATTTATGTTGGTTTAACGTGTGAAATTATGATGAATTTTTCCAATTTTTTTCATTGACGGTCGGTTACCTCTCATGTTGTCTTTACTTGGATTTGGACAGCCTGCTTCTGGAACTCCCATCCCAGGCAAGGGCATTGTTATTTGTAAATATCCGGGTGACCCGACGGTGGCCCTGGGGTTTCTTTCCTTTCTGTTTCTTCTTGCTTCTTCAATTTCTGGATACCTCTCTGTGTTCTATCCTTACGAAGGAAAATCCATTCCTCGAGGTGCCTTCTTTAAGAGCAGTAGTTTCTCTACATTCTTCAACATTGCTCTGTAAGTGTTCTTTGCCAAACAAGGTTTATTGCATGCTTATTTGTTGAGTTGCCATATGTATTTAAAAACCTTGGAATCTATTTGAATAATCCGCTTAATCTTTATTTGCATTCTGGTGAAGCTATTCATAAGAATTTTATTAAATTATAGGGAATATTTACGAGTTTTTATCAAATTATGAAGACTAAATTCTAATTTTTAAAGCCAACTAAATTCTTAACTTTACCATAAGGAGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTAAATACTAGAAACGAGAAGCAAACCAGTAACTAAAATAGACGTGAATCTAAGTGATCTAGAAACAAGCGCTTGGTAATGTTATTAACTTATTGTTTTACTTTTTTTCTTTACTAAAAAGAGATGTAATCTATTTGGTAATCATTGGTAGTTTATTGTTTTCTGAAATTCTGAATTAAAGATGTAAAACATTTTATTTAGCAGGGATATTTGCAAATATAACAATCAGATTGAAAGTATTAGAATATATAGCAACATTTAAAAAAATTGCAAATATATCAAAGTCTATTAGTGATAGAGTCTTATCACCGATAGACTTTGATGGTGTAGATGTATGTCACAGAAAGAGTTTATCAACGATAGAAGTCTATCACTTAGACTTTACTATATTTGCAATTTTTTAAAAATATTGCTATATACTTAGTTATTATTATTAAAATTGCTACTCATTAGTATTCATTTTATAAAACAATAGTGGTAAACTAGTGTTTGAAAAACAAAAAAAAACTGAAAACCTAAACGGGAAACTTAAATTTTGGGAACTTTTGGGATAAAACGACCTTACTTGAAAGTGATCTATTCTATAGGTTGTACGGTGTCTTTTGAGTGCTAAGAAAAATTTAAAGAAAAAGAAAAGAAAAACATAAACCATTATAGAATGTTTCAGTCTTCAAAAACTGGAAACAAGAAACGATAAACAAATAACTTGATACACCTTCTCCATTTGCAGGTTCACAACTGGATTAGCTATAACTTTTCTGGTATGGCCTACGGTCACGGAGCAACTTCACTTGACTCGCAACGTTCATCTCAATCTCGACACGGCATGCCCGACTGCTAAGACTGGTCTTCTGGGTGGCGGTGCATTTCTATCCCTTGATTCTTCCCTCCTTTGGTTGGTTGCTCTGATGCTCGCTGGTAATGCTCGAGAGGACTATCTCGACGAAATAGAGGAAAAAGGAACCAATGCTGGAGCTCTTAAGAGCAGTGCATAAAGCTTCTTTGTTTGTTTAGTGAGAATAATAATTCAGTTTCACATCACTGTCGATTTACTCATTTAGTAAGGATTTCTTGCCTTTAGGGGGAAACAAAGAGATTACTGTGAATATGGTATTCTTCTTTATAGTATACTGTTGGGACAATCCTTGTTGCTTCATCTAAATCGTCAAATGTATATAGGAAAATATATATTTTTTAGTTAATGATATGCATGGCAATTCTAGT

mRNA sequence

TTGAGCTAAAGCATATATAGCTAAGCACCACACAAATTGACTCTCACTCGTCAGTTTCGCCTTCATTCCGAAACAAGCTCTTCTTCATTTTCTTCTTCATTTCTCCCTTCAGGTTTCCCTGCATTTTCCAAATAATTTCTCTCAATTTTCAACCGCTTCTTCTTTGCCCTAGAGAAATCGAAGGTCACTGGTAACACTTATCTAGAGAACAATGGCTGTTTCTGTTAAGTTGATGGCTCTTACTGTTGGAACTTTCGGTGTCATATCCTTTATATTTGGAGTCGTTGCTGAAAACAAGAAGCCTGCTTCTGGAACTCCCATCCCAGGCAAGGGCATTGTTATTTGTAAATATCCGGGTGACCCGACGGTGGCCCTGGGGTTTCTTTCCTTTCTGTTTCTTCTTGCTTCTTCAATTTCTGGATACCTCTCTGTGTTCTATCCTTACGAAGGAAAATCCATTCCTCGAGGTGCCTTCTTTAAGAGCAGTAGTTTCTCTACATTCTTCAACATTGCTCTGTTCACAACTGGATTAGCTATAACTTTTCTGGTATGGCCTACGGTCACGGAGCAACTTCACTTGACTCGCAACGTTCATCTCAATCTCGACACGGCATGCCCGACTGCTAAGACTGGTCTTCTGGGTGGCGGTGCATTTCTATCCCTTGATTCTTCCCTCCTTTGGTTGGTTGCTCTGATGCTCGCTGGTAATGCTCGAGAGGACTATCTCGACGAAATAGAGGAAAAAGGAACCAATGCTGGAGCTCTTAAGAGCAGTGCATAAAGCTTCTTTGTTTGTTTAGTGAGAATAATAATTCAGTTTCACATCACTGTCGATTTACTCATTTAGTAAGGATTTCTTGCCTTTAGGGGGAAACAAAGAGATTACTGTGAATATGGTATTCTTCTTTATAGTATACTGTTGGGACAATCCTTGTTGCTTCATCTAAATCGTCAAATGTATATAGGAAAATATATATTTTTTAGTTAATGATATGCATGGCAATTCTAGT

Coding sequence (CDS)

ATGGCTGTTTCTGTTAAGTTGATGGCTCTTACTGTTGGAACTTTCGGTGTCATATCCTTTATATTTGGAGTCGTTGCTGAAAACAAGAAGCCTGCTTCTGGAACTCCCATCCCAGGCAAGGGCATTGTTATTTGTAAATATCCGGGTGACCCGACGGTGGCCCTGGGGTTTCTTTCCTTTCTGTTTCTTCTTGCTTCTTCAATTTCTGGATACCTCTCTGTGTTCTATCCTTACGAAGGAAAATCCATTCCTCGAGGTGCCTTCTTTAAGAGCAGTAGTTTCTCTACATTCTTCAACATTGCTCTGTTCACAACTGGATTAGCTATAACTTTTCTGGTATGGCCTACGGTCACGGAGCAACTTCACTTGACTCGCAACGTTCATCTCAATCTCGACACGGCATGCCCGACTGCTAAGACTGGTCTTCTGGGTGGCGGTGCATTTCTATCCCTTGATTCTTCCCTCCTTTGGTTGGTTGCTCTGATGCTCGCTGGTAATGCTCGAGAGGACTATCTCGACGAAATAGAGGAAAAAGGAACCAATGCTGGAGCTCTTAAGAGCAGTGCATAA

Protein sequence

MAVSVKLMALTVGTFGVISFIFGVVAENKKPASGTPIPGKGIVICKYPGDPTVALGFLSFLFLLASSISGYLSVFYPYEGKSIPRGAFFKSSSFSTFFNIALFTTGLAITFLVWPTVTEQLHLTRNVHLNLDTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYLDEIEEKGTNAGALKSSA

Homology

[Close]

BLAST of Lsi04G021750 vs. ExPASy TrEMBL
Match: A0A5D3E5J0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006950 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.7e-87
Identity = 168/189 (88.89%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MAVSVKLMALTVGTFGVISFIFGVVAENKKPASGTPIPGKGIVICKYPGDPTVALGFLSF 60
           MAVSVKLM+L VGT GVISF+FGVVAENKKPASGTPIPGKG+V+CKY  DPTVALGFLSF
Sbjct: 1   MAVSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGLVVCKYQSDPTVALGFLSF 60

Query: 61  LFLLASSISGYLSVFYPYEGKSIPRGAFFKSSSFSTFFNIALFTTGLAITFLVWPTVTEQ 120
           LFLLASS +GYLS+FYPYEGKS+PRGAFFKSSSFS FFNIALFTTGLAIT LVWPTVTEQ
Sbjct: 61  LFLLASSFAGYLSLFYPYEGKSVPRGAFFKSSSFSAFFNIALFTTGLAITMLVWPTVTEQ 120

Query: 121 LHLTRNVHLNLDTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYLDEIEEKGT 180
           LHLTRNVH NL+TACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDY DEI EKGT
Sbjct: 121 LHLTRNVHFNLNTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 NAGALKSSA 190
           N  A+KSSA
Sbjct: 181 NVEAVKSSA 189

[Close]

BLAST of Lsi04G021750 vs. ExPASy TrEMBL
Match: A0A1S3CR04 (uncharacterized protein LOC103503777 OS=Cucumis melo OX=3656 GN=LOC103503777 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.7e-87
Identity = 168/189 (88.89%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MAVSVKLMALTVGTFGVISFIFGVVAENKKPASGTPIPGKGIVICKYPGDPTVALGFLSF 60
           MAVSVKLM+L VGT GVISF+FGVVAENKKPASGTPIPGKG+V+CKY  DPTVALGFLSF
Sbjct: 1   MAVSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGLVVCKYQSDPTVALGFLSF 60

Query: 61  LFLLASSISGYLSVFYPYEGKSIPRGAFFKSSSFSTFFNIALFTTGLAITFLVWPTVTEQ 120
           LFLLASS +GYLS+FYPYEGKS+PRGAFFKSSSFS FFNIALFTTGLAIT LVWPTVTEQ
Sbjct: 61  LFLLASSFAGYLSLFYPYEGKSVPRGAFFKSSSFSAFFNIALFTTGLAITMLVWPTVTEQ 120

Query: 121 LHLTRNVHLNLDTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYLDEIEEKGT 180
           LHLTRNVH NL+TACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDY DEI EKGT
Sbjct: 121 LHLTRNVHFNLNTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 NAGALKSSA 190
           N  A+KSSA
Sbjct: 181 NVEAVKSSA 189

[Close]

BLAST of Lsi04G021750 vs. ExPASy TrEMBL
Match: A0A6J1CQA7 (uncharacterized protein LOC111013177 OS=Momordica charantia OX=3673 GN=LOC111013177 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.2e-84
Identity = 163/189 (86.24%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MAVSVKLMALTVGTFGVISFIFGVVAENKKPASGTPIPGKGIVICKYPGDPTVALGFLSF 60
           MAVSVK MAL V TFGVISFIFGVVAENKKPA+GTPIPGKG+VICKYP DPTVALG+LS 
Sbjct: 1   MAVSVKSMALIVATFGVISFIFGVVAENKKPAAGTPIPGKGLVICKYPSDPTVALGYLSV 60

Query: 61  LFLLASSISGYLSVFYPYEGKSIPRGAFFKSSSFSTFFNIALFTTGLAITFLVWPTVTEQ 120
           +FLLASSI+GY S+FYPY+GKS+PRGA F+SSSFS FFNIA+FTTGLAIT LVWPTVTEQ
Sbjct: 61  VFLLASSIAGYFSLFYPYQGKSVPRGAMFRSSSFSVFFNIAVFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHLNLDTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYLDEIEEKGT 180
           LHLTRNVH NL+T CPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDY +EIEEKGT
Sbjct: 121 LHLTRNVHHNLETECPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFEEIEEKGT 180

Query: 181 NAGALKSSA 190
           N+ ALKSSA
Sbjct: 181 NSEALKSSA 189

[Close]

BLAST of Lsi04G021750 vs. ExPASy TrEMBL
Match: A0A0A0LEF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881610 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.8e-84
Identity = 165/190 (86.84%), Postives = 174/190 (91.58%), Query Frame = 0


Query: 1   MAVSVKLMALTVGTFGVISFIFGVVAENKKPASGTPIPGKGIVICKYPGDPTVALGFLSF 60
           MAVSVKLM+L VGT GVISF+FGVVAENKKPASGTPIPGKG V+CKY  DPTVALGFLSF
Sbjct: 1   MAVSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGHVVCKYQSDPTVALGFLSF 60

Query: 61  LFLLASSISGYLSVFYPYEGKSIPRGAFFKSSSFSTFFNIALFTTGLAITFLVWPTVTEQ 120
           +FLLASS +GYLS+FYPYEGKS+PRGAFFKSS+F  FFNIALFTTGLAIT LVWPTVTEQ
Sbjct: 61  MFLLASSCAGYLSLFYPYEGKSVPRGAFFKSSTFFAFFNIALFTTGLAITMLVWPTVTEQ 120

Query: 121 LHLTRNVHLNLDTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYLDEIEEKG- 180
           LHLTRNVH NLDTACPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDY DEI EKG 
Sbjct: 121 LHLTRNVHFNLDTACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 TNAGALKSSA 190
           TN  A+KSSA
Sbjct: 181 TNVEAVKSSA 190

[Close]

BLAST of Lsi04G021750 vs. ExPASy TrEMBL
Match: A0A5D3E6F5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006960 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 4.1e-83
Identity = 160/189 (84.66%), Postives = 173/189 (91.53%), Query Frame = 0


Query: 1   MAVSVKLMALTVGTFGVISFIFGVVAENKKPASGTPIPGKGIVICKYPGDPTVALGFLSF 60
           MAVSVKLM+LTV   GV SFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTV LG+LS 
Sbjct: 1   MAVSVKLMSLTVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  LFLLASSISGYLSVFYPYEGKSIPRGAFFKSSSFSTFFNIALFTTGLAITFLVWPTVTEQ 120
            FLLASS++GYLS+FYPY+GKS+PRGA FKSSSFS FFNIALFTTGLAIT LVWPTVTEQ
Sbjct: 61  AFLLASSVAGYLSLFYPYQGKSVPRGAMFKSSSFSAFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHLNLDTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYLDEIEEKGT 180
           LHL+RNVH N +TACPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDY DEI EKGT
Sbjct: 121 LHLSRNVHHNTETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 NAGALKSSA 190
           N+ +LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of Lsi04G021750 vs. NCBI nr
Match: XP_038897126.1 (uncharacterized protein LOC120085287 [Benincasa hispida] >XP_038897127.1 uncharacterized protein LOC120085287 [Benincasa hispida])

HSP 1 Score: 334.3 bits (856), Expect = 6.6e-88
Identity = 172/189 (91.01%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MAVSVKLMALTVGTFGVISFIFGVVAENKKPASGTPIPGKGIVICKYPGDPTVALGFLSF 60
           MAVSVKLM+L VGT G ISFIFGVVAENKKPASGTPIPGKGIV+CKYP DPTVALGFLSF
Sbjct: 1   MAVSVKLMSLIVGTLGFISFIFGVVAENKKPASGTPIPGKGIVVCKYPSDPTVALGFLSF 60

Query: 61  LFLLASSISGYLSVFYPYEGKSIPRGAFFKSSSFSTFFNIALFTTGLAITFLVWPTVTEQ 120
           LFLLASS +GYLS+FYPYEGKSIPRGAFFKS SFS FFNIALFTTGLAITFLVWPTVTEQ
Sbjct: 61  LFLLASSCAGYLSLFYPYEGKSIPRGAFFKSISFSAFFNIALFTTGLAITFLVWPTVTEQ 120

Query: 121 LHLTRNVHLNLDTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYLDEIEEKGT 180
           LHLTRNVHLNL+TACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDY DEI EKGT
Sbjct: 121 LHLTRNVHLNLETACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 NAGALKSSA 190
              ALKSSA
Sbjct: 181 KVEALKSSA 189

[Close]

BLAST of Lsi04G021750 vs. NCBI nr
Match: XP_008466340.1 (PREDICTED: uncharacterized protein LOC103503777 [Cucumis melo] >KAA0038772.1 uncharacterized protein E6C27_scaffold92G003260 [Cucumis melo var. makuwa] >TYK31387.1 uncharacterized protein E5676_scaffold455G006950 [Cucumis melo var. makuwa])

HSP 1 Score: 331.3 bits (848), Expect = 5.6e-87
Identity = 168/189 (88.89%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MAVSVKLMALTVGTFGVISFIFGVVAENKKPASGTPIPGKGIVICKYPGDPTVALGFLSF 60
           MAVSVKLM+L VGT GVISF+FGVVAENKKPASGTPIPGKG+V+CKY  DPTVALGFLSF
Sbjct: 1   MAVSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGLVVCKYQSDPTVALGFLSF 60

Query: 61  LFLLASSISGYLSVFYPYEGKSIPRGAFFKSSSFSTFFNIALFTTGLAITFLVWPTVTEQ 120
           LFLLASS +GYLS+FYPYEGKS+PRGAFFKSSSFS FFNIALFTTGLAIT LVWPTVTEQ
Sbjct: 61  LFLLASSFAGYLSLFYPYEGKSVPRGAFFKSSSFSAFFNIALFTTGLAITMLVWPTVTEQ 120

Query: 121 LHLTRNVHLNLDTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYLDEIEEKGT 180
           LHLTRNVH NL+TACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDY DEI EKGT
Sbjct: 121 LHLTRNVHFNLNTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 NAGALKSSA 190
           N  A+KSSA
Sbjct: 181 NVEAVKSSA 189

[Close]

BLAST of Lsi04G021750 vs. NCBI nr
Match: XP_022143268.1 (uncharacterized protein LOC111013177 [Momordica charantia])

HSP 1 Score: 321.6 bits (823), Expect = 4.5e-84
Identity = 163/189 (86.24%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MAVSVKLMALTVGTFGVISFIFGVVAENKKPASGTPIPGKGIVICKYPGDPTVALGFLSF 60
           MAVSVK MAL V TFGVISFIFGVVAENKKPA+GTPIPGKG+VICKYP DPTVALG+LS 
Sbjct: 1   MAVSVKSMALIVATFGVISFIFGVVAENKKPAAGTPIPGKGLVICKYPSDPTVALGYLSV 60

Query: 61  LFLLASSISGYLSVFYPYEGKSIPRGAFFKSSSFSTFFNIALFTTGLAITFLVWPTVTEQ 120
           +FLLASSI+GY S+FYPY+GKS+PRGA F+SSSFS FFNIA+FTTGLAIT LVWPTVTEQ
Sbjct: 61  VFLLASSIAGYFSLFYPYQGKSVPRGAMFRSSSFSVFFNIAVFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHLNLDTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYLDEIEEKGT 180
           LHLTRNVH NL+T CPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDY +EIEEKGT
Sbjct: 121 LHLTRNVHHNLETECPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFEEIEEKGT 180

Query: 181 NAGALKSSA 190
           N+ ALKSSA
Sbjct: 181 NSEALKSSA 189

[Close]

BLAST of Lsi04G021750 vs. NCBI nr
Match: XP_004136327.1 (uncharacterized protein LOC101222453 [Cucumis sativus] >XP_031739415.1 uncharacterized protein LOC101222453 [Cucumis sativus] >KGN60148.1 hypothetical protein Csa_001823 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 9.9e-84
Identity = 165/190 (86.84%), Postives = 174/190 (91.58%), Query Frame = 0


Query: 1   MAVSVKLMALTVGTFGVISFIFGVVAENKKPASGTPIPGKGIVICKYPGDPTVALGFLSF 60
           MAVSVKLM+L VGT GVISF+FGVVAENKKPASGTPIPGKG V+CKY  DPTVALGFLSF
Sbjct: 1   MAVSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGHVVCKYQSDPTVALGFLSF 60

Query: 61  LFLLASSISGYLSVFYPYEGKSIPRGAFFKSSSFSTFFNIALFTTGLAITFLVWPTVTEQ 120
           +FLLASS +GYLS+FYPYEGKS+PRGAFFKSS+F  FFNIALFTTGLAIT LVWPTVTEQ
Sbjct: 61  MFLLASSCAGYLSLFYPYEGKSVPRGAFFKSSTFFAFFNIALFTTGLAITMLVWPTVTEQ 120

Query: 121 LHLTRNVHLNLDTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYLDEIEEKG- 180
           LHLTRNVH NLDTACPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDY DEI EKG 
Sbjct: 121 LHLTRNVHFNLDTACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 TNAGALKSSA 190
           TN  A+KSSA
Sbjct: 181 TNVEAVKSSA 190

[Close]

BLAST of Lsi04G021750 vs. NCBI nr
Match: XP_022143291.1 (uncharacterized protein LOC111013196 [Momordica charantia])

HSP 1 Score: 317.4 bits (812), Expect = 8.4e-83
Identity = 160/189 (84.66%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MAVSVKLMALTVGTFGVISFIFGVVAENKKPASGTPIPGKGIVICKYPGDPTVALGFLSF 60
           MAVSVK M+L V TFGVISFIFGVVAENKKPA+GTPIPGKG+VICKYPGDPTVALG+LS 
Sbjct: 1   MAVSVKSMSLIVATFGVISFIFGVVAENKKPAAGTPIPGKGLVICKYPGDPTVALGYLSV 60

Query: 61  LFLLASSISGYLSVFYPYEGKSIPRGAFFKSSSFSTFFNIALFTTGLAITFLVWPTVTEQ 120
           LFLLASSI+GY S+FYPY+GKS+PRGA F+SSSFS FFN+A+FTTGLAIT LVWPTVTEQ
Sbjct: 61  LFLLASSIAGYFSLFYPYQGKSVPRGAIFRSSSFSIFFNVAVFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHLNLDTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYLDEIEEKGT 180
           LHL RNVH NL+T CPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDY +EIEEKG+
Sbjct: 121 LHLMRNVHHNLETECPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFEEIEEKGS 180

Query: 181 NAGALKSSA 190
           N  ALKSSA
Sbjct: 181 NGEALKSSA 189

[Close]

BLAST of Lsi04G021750 vs. TAIR 10
Match: AT4G31130.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-69
Identity = 126/184 (68.48%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MAVSVKLMALTVGTFGVISFIFGVVAENKKPASGTPIPGKGIVICKYPGDPTVALGFLSF 60
           MAVS+K M+L V   GV+SF+ GV+AENKKPASGTPI GKG+VICKYP DPTVALG+LS 
Sbjct: 1   MAVSMKQMSLVVSALGVLSFVLGVIAENKKPASGTPISGKGVVICKYPSDPTVALGYLSA 60

Query: 61  LFLLASSISGYLSVFYPYEGKSIPRGAFFKSSSFSTFFNIALFTTGLAITFLVWPTVTEQ 120
            FLLA +++GY S+F  Y+GKS+P    FKS+SFS FFNIAL T+GLA++ L+WPT+TEQ
Sbjct: 61  AFLLACTVAGYKSLFISYKGKSVPNSVLFKSTSFSVFFNIALITSGLALSLLLWPTITEQ 120

Query: 121 LHLTRNVHLNLDTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYLDEIEEKGT 180
           LHLTRNVH NL+T+CPTAKTGLLGGGAF+SLDS L WLVALMLA NARED+ DE+E +  
Sbjct: 121 LHLTRNVHRNLETSCPTAKTGLLGGGAFVSLDSCLFWLVALMLADNAREDHFDEVESRSI 180

Query: 181 NAGA 185
           +  +
Sbjct: 181 DGNS 184

The following BLAST results are available for this feature:

BLAST of Lsi04G021750 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi04G021750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E5J0	2.7e-87	88.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CR04	2.7e-87	88.89	uncharacterized protein LOC103503777 OS=Cucumis melo OX=3656 GN=LOC103503777 PE=...	[more]
A0A6J1CQA7	2.2e-84	86.24	uncharacterized protein LOC111013177 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0LEF8	4.8e-84	86.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881610 PE=4 SV=1	[more]
A0A5D3E6F5	4.1e-83	84.66	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lsi04G021750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897126.1	6.6e-88	91.01	uncharacterized protein LOC120085287 [Benincasa hispida] >XP_038897127.1 unchara...	[more]
XP_008466340.1	5.6e-87	88.89	PREDICTED: uncharacterized protein LOC103503777 [Cucumis melo] >KAA0038772.1 unc...	[more]
XP_022143268.1	4.5e-84	86.24	uncharacterized protein LOC111013177 [Momordica charantia]	[more]
XP_004136327.1	9.9e-84	86.84	uncharacterized protein LOC101222453 [Cucumis sativus] >XP_031739415.1 uncharact...	[more]
XP_022143291.1	8.4e-83	84.66	uncharacterized protein LOC111013196 [Momordica charantia]	[more]

BLAST of Lsi04G021750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31130.1	1.1e-69	68.48	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 60..154 e-value: 1.9E-12 score: 47.5
None	No IPR available	PANTHER	PTHR31769:SF9	OS05G0465400 PROTEIN	coord: 1..180
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 1..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G021750.1	Lsi04G021750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane