Lsi04G021740 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G021740
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function (DUF1218)
Location	chr04: 28822208 .. 28825142 (+)
RNA-Seq Expression	Lsi04G021740
Synteny	Lsi04G021740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGCGCCAACTCAGACTTATTACCAATTTTATTTCTTAATAAACTCTTTTTCCTTCTGGATTTCTAAATCGGCACAATTCCTAAGTTAAAAAAAAAAAGGAAAAAAAGAAAACAGTTAAATTCCATATTTTAGATACGCCTCCCGAAATTTGATAGATTCCAGGATATACATTGGCCTATACAGAGCACTATAAATATCGAAACCATTGACCCATCCCTTCAGTCTTCACCTAAAATCCGGAGTGGGAGTGGGAACGGGAGAGAAATCAATTTTCATTTCCTTTCGCTCTCCTCTTTCTTCCTTCCTTCCTTCCTTCGTTAATTTCTTCAGGTTTGCTCGCGATTCCTCTTCAATTTATTCGTTGTTCTTTGTTAATGTTCTTCGTAAATCGCTGTTGCCGCCAATTTTGGTTGTCGAATTCTGTTTTGCAGTAGAAATTGGAGGAGAATTTCGTGTTTTAGGTCTTTTTAAGTTACTTTATTATGTTTTCTTGGGCTGGGGTTGTATTGTTGTTGCTTCTGTACTGTTTATTCCGTACGTTGTTTAGAGGATATACGGATAGAGAAGCTATTATTTTGATTGTTTGATTATTCGATTTATTTTTTGAGAAAATATGTCTATTGTTTTTGTATTTTATTGTTTTTTTACCCCTGTTAGTGATGAAAGATGACTCTCGAATTGGTATCCCTAGGGATTAAGAGTAATAAAGCTAAGGAGGCGTTTGGCCCACTCAGTGGGGTTAATTTGTTTGGTGTTTTGGAGTTAGTAGTAAGTTTATGTTTGGAGTGTAGAGTTGTAAGATGGAGTTCTTCGATAATTGTGAAAAGTATAAAAAGATGAAAAGATGGAATTACTTTATAAATGTGCAAACTTTGTGCCATTGAAGTTTACTTGTTTACACCAACTTCTTAAGTTGGTGGGCCAAACTTCATAATATTGAAGTTGAGTTGGTAGGCCAAACAGCCCCTAAGATTGGAACGTTTGTTGTCGTACGGAGCCATTGCTTTTCATGTGGTGTATTTTCCATTAATTTTCATACTGTTTTATCACTGTTCTTCTTTGGAGTGTAGAATCTGTTAGAACATGTGATTTGAGGGGTAGCGATTGAGGAGGTTGTATTTTTCCATTCAGTATACTGTTCTTGGCGTATTTGACCTACATTATGAATTTAGAAAAATTTTATTATGTAAGAAAGTGCAATCATAACTTAGTCTAATAGCTCCGCCTTGTTTTCCCCAGTATTTGCACATTCGTAGTGGTATATCTTATATCTCTGTCATCAGTTCTGAATATTTGTTTTGTTCCCTATAGGTGGTGTCATTTATCTGCAGAACAATGGCCGTGTCTATCAAGACTATGTCTCTTATTGTTGCAGCTTTAGGTGTGACATCCTTTATATTTGGAGTCGTTGCTGAGAACAAGAAGGTAAGAATGTGCAATCTTCATTAATCTATTTGGGGGAGTAGTTGTGTAGATGCAAATGCGATAGCCAGTGGTTTGACATGTGAAATTGTAATGACTTTTCCCTTGCCATCTGAATTGTTTGTTAAACCTTTTTTTGCTAGTTTCATTGAGCCATACATGATCGTACCCTATGCAATATCGTATAGGTTAATACTCTTCTATTTTAAGAATTGGTCTTCTTCTTTATTAATTGGTCACTGTCTTTTTTGTTGTCTTTACTTGTGGACAGCCTGCATCTGGAACTCCCATCCCAGGCAAAGGCATCGTTATCTGTCGGTATCCGGGCGACCCAACTGTGGTCCTGGGATATCTTTCGGTTGCATTTCTTCTTGCTTCTTCAATTGCAGGATACTTCTCTTTGTTCTATCCTTACCAAGGAAAATCCGTTCCTCGAGGTGCCATGTTTAAGAGCAGCAGTTTCTCTGTTTTCTTCAACATTGCCCTGTAAGTTCTCTTTCCGAGTCACTTCCTTTATGCTAGCTTTCTAAAACTTTTTTAACTTTGAAGTATCTAAATGCATTATGGTTCAATATTATAGATTCTTGAAAATTCTGCTTCTCTGAGAAATACTCCTACAGGTTGTTTTGTGTAATTTACACATCACAAATTGAATCGTTACCTTTTTTAGAGTAGTTTCCTGTCCGAATACACTTATGAAACAAGATTTCTTGCATGTTTAAATGAATGTTCTCTTTTCCAAGAGTCATCGAATTGATTCTATCATTGTGATAATATTCCACCTATATTTATATATATATTCTTTTATTTCTATGATTCGTGGTATAAAATCAAGAAAAATAAGCTGTAAAATGGAAATGTTATCAAATTTCATATCGATAGGTGTCCGTCTATTTACGAGGTTTTGTTAGACTAATGTCGATATCACAATGTCATATGATCTCATCCTTTTGACTTTTCATGTGGTTTTTGTAAGGCATAGTTACATATCATTTTGATACACCCTCTCTGTTTGCAGCTTCACAACTGGACTGGCTATAACTTTGCTTGTATGGCCGACGGTCACCGAGCAACTTCACTTGACGCGCAATGTTCATCACAACATCGAGACAGCATGCCCAACCGCTAAGACCGGTCTTCTGGGTGGTGGTGCATTTCTATCCCTTGATTCATCCCTCTTCTGGTTGGTTGCCCTGATGTTGGCTGGAAATGCTCGTGAGGACTACTTTGATGAAATAGCCGATAAAGTAGCCAATTCTGAAGCTCTTAAGAGCAGCGCATGAAAAAACCTCTCTGTTTAGTGAAATAATAATTCAGTTTCATTTTACTTTGGAATTTTACTTGTCATTAACTATTAAGTAGAGATTTATGTGTGAATATGGTATTCTTCTTTATAGTCTTACTGTTGAACATTTCTTGTGGTGTGCTAAATCCTACACCAAACTCAATTCACAGTCAACTAATAACATATTGGTACTAAGTTTAAATATATTCTGGCCTTCTACTTTATT

mRNA sequence

CTGGCGCCAACTCAGACTTATTACCAATTTTATTTCTTAATAAACTCTTTTTCCTTCTGGATTTCTAAATCGGCACAATTCCTAAGTTAAAAAAAAAAAGGAAAAAAAGAAAACAGTTAAATTCCATATTTTAGATACGCCTCCCGAAATTTGATAGATTCCAGGATATACATTGGCCTATACAGAGCACTATAAATATCGAAACCATTGACCCATCCCTTCAGTCTTCACCTAAAATCCGGAGTGGGAGTGGGAACGGGAGAGAAATCAATTTTCATTTCCTTTCGCTCTCCTCTTTCTTCCTTCCTTCCTTCCTTCGTTAATTTCTTCAGGTGGTGTCATTTATCTGCAGAACAATGGCCGTGTCTATCAAGACTATGTCTCTTATTGTTGCAGCTTTAGGTGTGACATCCTTTATATTTGGAGTCGTTGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCATCCCAGGCAAAGGCATCGTTATCTGTCGGTATCCGGGCGACCCAACTGTGGTCCTGGGATATCTTTCGGTTGCATTTCTTCTTGCTTCTTCAATTGCAGGATACTTCTCTTTGTTCTATCCTTACCAAGGAAAATCCGTTCCTCGAGGTGCCATGTTTAAGAGCAGCAGTTTCTCTGTTTTCTTCAACATTGCCCTCTTCACAACTGGACTGGCTATAACTTTGCTTGTATGGCCGACGGTCACCGAGCAACTTCACTTGACGCGCAATGTTCATCACAACATCGAGACAGCATGCCCAACCGCTAAGACCGGTCTTCTGGGTGGTGGTGCATTTCTATCCCTTGATTCATCCCTCTTCTGGTTGGTTGCCCTGATGTTGGCTGGAAATGCTCGTGAGGACTACTTTGATGAAATAGCCGATAAAGTAGCCAATTCTGAAGCTCTTAAGAGCAGCGCATGAAAAAACCTCTCTGTTTAGTGAAATAATAATTCAGTTTCATTTTACTTTGGAATTTTACTTGTCATTAACTATTAAGTAGAGATTTATGTGTGAATATGGTATTCTTCTTTATAGTCTTACTGTTGAACATTTCTTGTGGTGTGCTAAATCCTACACCAAACTCAATTCACAGTCAACTAATAACATATTGGTACTAAGTTTAAATATATTCTGGCCTTCTACTTTATT

Coding sequence (CDS)

ATGGCCGTGTCTATCAAGACTATGTCTCTTATTGTTGCAGCTTTAGGTGTGACATCCTTTATATTTGGAGTCGTTGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCATCCCAGGCAAAGGCATCGTTATCTGTCGGTATCCGGGCGACCCAACTGTGGTCCTGGGATATCTTTCGGTTGCATTTCTTCTTGCTTCTTCAATTGCAGGATACTTCTCTTTGTTCTATCCTTACCAAGGAAAATCCGTTCCTCGAGGTGCCATGTTTAAGAGCAGCAGTTTCTCTGTTTTCTTCAACATTGCCCTCTTCACAACTGGACTGGCTATAACTTTGCTTGTATGGCCGACGGTCACCGAGCAACTTCACTTGACGCGCAATGTTCATCACAACATCGAGACAGCATGCCCAACCGCTAAGACCGGTCTTCTGGGTGGTGGTGCATTTCTATCCCTTGATTCATCCCTCTTCTGGTTGGTTGCCCTGATGTTGGCTGGAAATGCTCGTGAGGACTACTTTGATGAAATAGCCGATAAAGTAGCCAATTCTGAAGCTCTTAAGAGCAGCGCATGA

Protein sequence

MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQLHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVANSEALKSSA

Homology

[Close]

BLAST of Lsi04G021740 vs. ExPASy TrEMBL
Match: A0A0A0LHD9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881600 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.8e-92
Identity = 178/189 (94.18%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSV 60
           MAVS+K MSLIVAALGVTSFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTVVLGYLSV
Sbjct: 1   MAVSVKLMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASS AGY SLFYPYQGKSVPRGAMFKSSSFS FFNIALFTTGLAITLLVWPTVTEQ
Sbjct: 61  AFLLASSAAGYLSLFYPYQGKSVPRGAMFKSSSFSTFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVA 180
           LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+K +
Sbjct: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGS 180

Query: 181 NSEALKSSA 190
           NSE+LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of Lsi04G021740 vs. ExPASy TrEMBL
Match: A0A5D3E6F5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006960 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 9.0e-91
Identity = 175/189 (92.59%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 1   MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSV 60
           MAVS+K MSL VAALGVTSFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTVVLGYLSV
Sbjct: 1   MAVSVKLMSLTVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASS+AGY SLFYPYQGKSVPRGAMFKSSSFS FFNIALFTTGLAITLLVWPTVTEQ
Sbjct: 61  AFLLASSVAGYLSLFYPYQGKSVPRGAMFKSSSFSAFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVA 180
           LHL+RNVHHN ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+K  
Sbjct: 121 LHLSRNVHHNTETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 NSEALKSSA 190
           NSE+LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of Lsi04G021740 vs. ExPASy TrEMBL
Match: A0A1S3CR11 (uncharacterized protein LOC103503778 OS=Cucumis melo OX=3656 GN=LOC103503778 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 9.0e-91
Identity = 175/189 (92.59%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 1   MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSV 60
           MAVS+K MSL VAALGVTSFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTVVLGYLSV
Sbjct: 1   MAVSVKLMSLTVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASS+AGY SLFYPYQGKSVPRGAMFKSSSFS FFNIALFTTGLAITLLVWPTVTEQ
Sbjct: 61  AFLLASSVAGYLSLFYPYQGKSVPRGAMFKSSSFSAFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVA 180
           LHL+RNVHHN ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+K  
Sbjct: 121 LHLSRNVHHNTETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 NSEALKSSA 190
           NSE+LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of Lsi04G021740 vs. ExPASy TrEMBL
Match: A0A6J1CQA7 (uncharacterized protein LOC111013177 OS=Momordica charantia OX=3673 GN=LOC111013177 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.6e-87
Identity = 167/189 (88.36%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 1   MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSV 60
           MAVS+K+M+LIVA  GV SFIFGVVAENKKPA+GTPIPGKG+VIC+YP DPTV LGYLSV
Sbjct: 1   MAVSVKSMALIVATFGVISFIFGVVAENKKPAAGTPIPGKGLVICKYPSDPTVALGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQ 120
            FLLASSIAGYFSLFYPYQGKSVPRGAMF+SSSFSVFFNIA+FTTGLAITLLVWPTVTEQ
Sbjct: 61  VFLLASSIAGYFSLFYPYQGKSVPRGAMFRSSSFSVFFNIAVFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVA 180
           LHLTRNVHHN+ET CPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDYF+EI +K  
Sbjct: 121 LHLTRNVHHNLETECPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFEEIEEKGT 180

Query: 181 NSEALKSSA 190
           NSEALKSSA
Sbjct: 181 NSEALKSSA 189

[Close]

BLAST of Lsi04G021740 vs. ExPASy TrEMBL
Match: A0A6J1CPU8 (uncharacterized protein LOC111013196 OS=Momordica charantia OX=3673 GN=LOC111013196 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 6.1e-87
Identity = 165/189 (87.30%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 1   MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSV 60
           MAVS+K+MSLIVA  GV SFIFGVVAENKKPA+GTPIPGKG+VIC+YPGDPTV LGYLSV
Sbjct: 1   MAVSVKSMSLIVATFGVISFIFGVVAENKKPAAGTPIPGKGLVICKYPGDPTVALGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQ 120
            FLLASSIAGYFSLFYPYQGKSVPRGA+F+SSSFS+FFN+A+FTTGLAITLLVWPTVTEQ
Sbjct: 61  LFLLASSIAGYFSLFYPYQGKSVPRGAIFRSSSFSIFFNVAVFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVA 180
           LHL RNVHHN+ET CPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYF+EI +K +
Sbjct: 121 LHLMRNVHHNLETECPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFEEIEEKGS 180

Query: 181 NSEALKSSA 190
           N EALKSSA
Sbjct: 181 NGEALKSSA 189

[Close]

BLAST of Lsi04G021740 vs. NCBI nr
Match: XP_004136329.1 (uncharacterized protein LOC101222863 [Cucumis sativus] >XP_031737574.1 uncharacterized protein LOC101222863 [Cucumis sativus] >KGN60147.1 hypothetical protein Csa_002476 [Cucumis sativus])

HSP 1 Score: 347.1 bits (889), Expect = 9.9e-92
Identity = 178/189 (94.18%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSV 60
           MAVS+K MSLIVAALGVTSFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTVVLGYLSV
Sbjct: 1   MAVSVKLMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASS AGY SLFYPYQGKSVPRGAMFKSSSFS FFNIALFTTGLAITLLVWPTVTEQ
Sbjct: 61  AFLLASSAAGYLSLFYPYQGKSVPRGAMFKSSSFSTFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVA 180
           LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+K +
Sbjct: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGS 180

Query: 181 NSEALKSSA 190
           NSE+LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of Lsi04G021740 vs. NCBI nr
Match: XP_038896871.1 (uncharacterized protein LOC120085090 [Benincasa hispida])

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-91
Identity = 177/189 (93.65%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 1   MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSV 60
           MA S+K MSLIVAALGV SFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTVVLGYLSV
Sbjct: 1   MAASVKMMSLIVAALGVISFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFS FFNIALFTTGLAITLL+WPTVTEQ
Sbjct: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSAFFNIALFTTGLAITLLIWPTVTEQ 120

Query: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVA 180
           LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+K  
Sbjct: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGG 180

Query: 181 NSEALKSSA 190
           NSE+LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of Lsi04G021740 vs. NCBI nr
Match: XP_008466341.1 (PREDICTED: uncharacterized protein LOC103503778 [Cucumis melo] >KAA0038773.1 uncharacterized protein E6C27_scaffold92G003270 [Cucumis melo var. makuwa] >TYK31388.1 uncharacterized protein E5676_scaffold455G006960 [Cucumis melo var. makuwa])

HSP 1 Score: 342.8 bits (878), Expect = 1.9e-90
Identity = 175/189 (92.59%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 1   MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSV 60
           MAVS+K MSL VAALGVTSFIFGV+AENKKPASGTPIPGKGIVIC+YPGDPTVVLGYLSV
Sbjct: 1   MAVSVKLMSLTVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASS+AGY SLFYPYQGKSVPRGAMFKSSSFS FFNIALFTTGLAITLLVWPTVTEQ
Sbjct: 61  AFLLASSVAGYLSLFYPYQGKSVPRGAMFKSSSFSAFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVA 180
           LHL+RNVHHN ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIA+K  
Sbjct: 121 LHLSRNVHHNTETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGT 180

Query: 181 NSEALKSSA 190
           NSE+LKSSA
Sbjct: 181 NSESLKSSA 189

[Close]

BLAST of Lsi04G021740 vs. NCBI nr
Match: XP_022143268.1 (uncharacterized protein LOC111013177 [Momordica charantia])

HSP 1 Score: 330.5 bits (846), Expect = 9.6e-87
Identity = 167/189 (88.36%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 1   MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSV 60
           MAVS+K+M+LIVA  GV SFIFGVVAENKKPA+GTPIPGKG+VIC+YP DPTV LGYLSV
Sbjct: 1   MAVSVKSMALIVATFGVISFIFGVVAENKKPAAGTPIPGKGLVICKYPSDPTVALGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQ 120
            FLLASSIAGYFSLFYPYQGKSVPRGAMF+SSSFSVFFNIA+FTTGLAITLLVWPTVTEQ
Sbjct: 61  VFLLASSIAGYFSLFYPYQGKSVPRGAMFRSSSFSVFFNIAVFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVA 180
           LHLTRNVHHN+ET CPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDYF+EI +K  
Sbjct: 121 LHLTRNVHHNLETECPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFEEIEEKGT 180

Query: 181 NSEALKSSA 190
           NSEALKSSA
Sbjct: 181 NSEALKSSA 189

[Close]

BLAST of Lsi04G021740 vs. NCBI nr
Match: XP_022143291.1 (uncharacterized protein LOC111013196 [Momordica charantia])

HSP 1 Score: 330.1 bits (845), Expect = 1.3e-86
Identity = 165/189 (87.30%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 1   MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSV 60
           MAVS+K+MSLIVA  GV SFIFGVVAENKKPA+GTPIPGKG+VIC+YPGDPTV LGYLSV
Sbjct: 1   MAVSVKSMSLIVATFGVISFIFGVVAENKKPAAGTPIPGKGLVICKYPGDPTVALGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQ 120
            FLLASSIAGYFSLFYPYQGKSVPRGA+F+SSSFS+FFN+A+FTTGLAITLLVWPTVTEQ
Sbjct: 61  LFLLASSIAGYFSLFYPYQGKSVPRGAIFRSSSFSIFFNVAVFTTGLAITLLVWPTVTEQ 120

Query: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADKVA 180
           LHL RNVHHN+ET CPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYF+EI +K +
Sbjct: 121 LHLMRNVHHNLETECPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFEEIEEKGS 180

Query: 181 NSEALKSSA 190
           N EALKSSA
Sbjct: 181 NGEALKSSA 189

[Close]

BLAST of Lsi04G021740 vs. TAIR 10
Match: AT4G31130.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 276.9 bits (707), Expect = 1.2e-74
Identity = 135/178 (75.84%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 1   MAVSIKTMSLIVAALGVTSFIFGVVAENKKPASGTPIPGKGIVICRYPGDPTVVLGYLSV 60
           MAVS+K MSL+V+ALGV SF+ GV+AENKKPASGTPI GKG+VIC+YP DPTV LGYLS 
Sbjct: 1   MAVSMKQMSLVVSALGVLSFVLGVIAENKKPASGTPISGKGVVICKYPSDPTVALGYLSA 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSVFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLA ++AGY SLF  Y+GKSVP   +FKS+SFSVFFNIAL T+GLA++LL+WPT+TEQ
Sbjct: 61  AFLLACTVAGYKSLFISYKGKSVPNSVLFKSTSFSVFFNIALITSGLALSLLLWPTITEQ 120

Query: 121 LHLTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIADK 179
           LHLTRNVH N+ET+CPTAKTGLLGGGAF+SLDS LFWLVALMLA NARED+FDE+  +
Sbjct: 121 LHLTRNVHRNLETSCPTAKTGLLGGGAFVSLDSCLFWLVALMLADNAREDHFDEVESR 178

The following BLAST results are available for this feature:

BLAST of Lsi04G021740 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi04G021740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHD9	4.8e-92	94.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881600 PE=4 SV=1	[more]
A0A5D3E6F5	9.0e-91	92.59	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CR11	9.0e-91	92.59	uncharacterized protein LOC103503778 OS=Cucumis melo OX=3656 GN=LOC103503778 PE=...	[more]
A0A6J1CQA7	4.6e-87	88.36	uncharacterized protein LOC111013177 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1CPU8	6.1e-87	87.30	uncharacterized protein LOC111013196 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Lsi04G021740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136329.1	9.9e-92	94.18	uncharacterized protein LOC101222863 [Cucumis sativus] >XP_031737574.1 uncharact...	[more]
XP_038896871.1	1.3e-91	93.65	uncharacterized protein LOC120085090 [Benincasa hispida]	[more]
XP_008466341.1	1.9e-90	92.59	PREDICTED: uncharacterized protein LOC103503778 [Cucumis melo] >KAA0038773.1 unc...	[more]
XP_022143268.1	9.6e-87	88.36	uncharacterized protein LOC111013177 [Momordica charantia]	[more]
XP_022143291.1	1.3e-86	87.30	uncharacterized protein LOC111013196 [Momordica charantia]	[more]

BLAST of Lsi04G021740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31130.1	1.2e-74	75.84	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 60..154 e-value: 9.4E-14 score: 51.7
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 1..181
None	No IPR available	PANTHER	PTHR31769:SF9	OS05G0465400 PROTEIN	coord: 1..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G021740.1	Lsi04G021740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane