Lsi04G021690 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G021690
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPolyamine-modulated factor 1-binding protein
Locationchr04: 28746838 .. 28761096 (+)
RNA-Seq ExpressionLsi04G021690
SyntenyLsi04G021690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAGTCAATATTCACGTCTTACGATTCTACCTCCATTTATATGTGTAATCCTTCTTTTATTTGATTGTCATGCTTCACTTATCCGTTATTTTTTAGTTGTGTAATTCTAGAAGGAATTTTATTAATTCTCTTGCTTCGAGATGATTGTACTCGGAGAAAGGTTGCTCCTCTGATAATTTATAGGCTTATAATTTACACCAGATCAAATGTGCTCATGAGATTAGATCTGTTTTGGAGAGAGGTGGTAAATCACAGCCGAACACATGTGAAAACTTGAGAGCCTTGAAACAAGCAATATCAGTTCAAAGTCAAACCAAGACGAGCTTGCTTCTATCACAAAATCATTTTCTCGTTTTCTCTTTCCTTCTTAGCTTGTTGGTGTTTATCACGCCCTGATCTTTGGATCATTCTGTGTCATTCAATTAGAGAACGCTGGTTCTGATATTTTTACATCCGCGCAGATATATCACAACAGGCTCAATCGGCTATGGAGAACATGCTTAGAATGATCAGGTTTGTTAATTACGAACCAGTAACTCGTTTCTTTCTTTCCTTTTTGTTTTTTGGATTTTTAGTTTGCGGGAAATGTTGTAAAGTGGTAAGCTGCAAGTGGGGAGAGTGAACATTACTACATGCGAACTTGATGCTTCGATGCTATCATCCTTGCACTGACAACGAAATTTTTTTAATTTTTATAAAAGAGATCTTAAAAGCACGAACTCCTCTAAATAATACATGGAGTTGAAGGAACGCAAATAGTATGATGACATGAAGTTTGCTTCGATGCTTAGATTTCTGGTTCATGCTTTCAATAAATACTATAAACAAATTTGTGCCAGCGAAAGATCGACTACTTTACATGCGGAGCCAATTTAAAGCTATGCTCATAAAACACTGGTTTTGTTTACTTTTTTCTTCTTCTTCGTAATAGAGGATTCTCCCAGTCAGAAAATATGAATATACTTTAGTGAAGTTATCTGTTCTTTGTCGCCCACCAATACCATCTATCTTCCCATTCCTCATCTGCCCATCATTTTCTGAATCTTCTACTCCTAATGACTCAAATTAATTGCATAAAACATAATAATGGTACGTCTACGTCGTCATGCTAACCTTAGTCTTCTCGTTTTCAACTGTTTGCAGTGAAATTGATCAAAACGCTGTTGGAATAGTGGAAGATATAGAGAAGTGCAGGGGTTCTTCTCTTGACAGGAAGGGGGTGCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACATGCTCAACAATGGAGGGGGAACGCTGTAAGATTTCTCTCAAAATTTCTGCACGTTTCTGCCAATACATATCCCCTTAATATAGTTACACTGTCACTCATCTCTTGTTTCTTGATAGTTGAAGACCATAAGTCATCAGTTTAGGCTTTGAAGGAGTAATGGGATATGTGAACTGAGCAGATATAATTTTTGTCTTCAAACAAAGAACAAATGATCACCCTCTCTTAAAACATTCAAGTCTTCTACTTTAGAGCCATCAGCCATGAGAATTGAGCTCCCTCTCTTGCCAAATCTTTTCTCTGCAATCCATGGTCAATCAGTTATCTTCTAATTTGAAGAATGTCATCTATATTGACATTAAAAAGGTACATGAGGAGTTAAAAAAGCCAAGCCCTTTATATTTTCTTAGAAGTAAAATTTCAAGTTTGATTTTTTCTGTCCGATTCATAACTCTATTTTATAACTTACATTCGGACCATGATATCAAGAACATGGTAAGGTTTGTATTTACCTGTCTTCTTTATAAGACAAGAAAACCTCGCAAGTGACTTAAATTTCCAATTTCACCATCTTCTTCCTCTCATATTTAATCCTATGATTAAGTCAACAAAAATTTGTCCTCAAGGAATAATAGGTACTTAGTTTTGGATTGTAATTTCTTAAATATTTCCCGGGACTGTTTAAGATGTATGAGGCAAAGTATATTTTACACATATCTAATTATAATACCTGCCAATCCAAAAAGTTCTTCCATTGACTCAGGCAGAAGTACCAGTTTTCCCTTACTGTTGCCATCTTTTGTACTTTCATCTGGATGGTGCTCGTGAATTATCACCCTTATGCGAACTGTAGGTGGCAATGGTCCAGATCCTATAACATAATTGTGTCAATTGAGCTATGAAGTTCTAATTTATTGTACAATCCTTAATATGCTTATCCAAGCACAATCCCCCTAGTAAACTTTTATATGAAGTACTGCAACGCAGATGGTCTCAAACAACAATTGAAAATTCATGATATCCAAGTTGCTCAAATAAAGTAACTCGATTAAGATTAGAACATCTAGGAGTGTGCTTTGTTCTGAGTCAAGTTGATAGACGGACTGCTTACTAAATGAGTCCAATATTTTTTGCTGACAAAGCTGGATTTTCATAATTTATCTTCTAATTTAAAGAAAAAGTTTAAATGATCAACCCAAATTATTGAGAAATGTTTAGCATGCTCTGTTTTTAAAGAGGTGAATATAAATTCTTTTGACAAAACTCAATATAGGTTACTTGAAAAACTAAGTGACAACATAGTTCTTGCACACATGAACATTATGTTCTGATCATGATGAATCTAGAATGTGCTTGGATGTTGTTGCAACTTGCAGCAAGATATATGTTCAGTTAAAAAAAAATTAATTCCCAAGATTTATGAATTATCCACTTTTTGCATGTTTTCTTAGCTAAACTTGTTAGAAAATGATATCATAACTATCAATGTCATCTACTCACCTTCCATTTTTTGATCTTCATGATGATTTGGTACTCTCTGATTTTGTGTCTCGTTTGGTTCTGTGCCCTGCAAAACAACATTTAAGGTTCTCGTTAGTCTTTATCATTCTCATAAGTGAGCCATTTCTCTGGCGGAAACCATTAGGAACCAGTTTACCAGGTAACAGACAGGCAACTCAACTATATCCAGAATATATAGGGAAAAAGAGAGAATATTTATGAATGTTCGGCATTGTACTGATGATTTGTTCAAAAATTAATTTGCATCAACGTATAATTTCTTTCCAAAGCATGGACTTAACTTCCATTGAGCAGTTCATTACAAGTTGCATCATCCAATGTTGCTTGGTCATCTTTTCTAGTTGTATTTTTTAAAATTAGAATTAGTTTATCAATGAATCTTTATTTGGTAAATTAAATAGCTCCTATGGTTTACTCTAATGGACACATTTTCCCTCTACTTTAAATTGTGAGCCATTTCCCCCTTTTCATGGATAAATGATTGCTAAATTTCCCTTTCAAATTGTTTTTGTCAAATTTTCTTGACCAGAGAAGTACTTGAAATTCTCCCTTTATATATTATGTTATTGACTCATTTGTGTCTTTGTTACATACTAAGTTTTACAAGTAACTTTAAAGAATTAAAAGAATATAAAAAATGACTTTAGCAACATTCATTTGTGCTTTTTCCAGAAAATGTAAATTATAACTTTGATCTATTTTAATTTCTTTTCCTGTAATTTTTCTGCTATATACTTGCAGGAAAAGTTGACTTTCATAAATTTAGGGAAGAAATTTACCAGTTGTCAATAATCCTACTATTTTATTCTCTAGACATGGTTAAGGAGAACACATTAATGCCTAGCATATTTTCACCATAGGCATAAGCATTTTGCTTGAATCTAGTTCGCCTAGCTTGCACTTGTATAGATGATATTTTTGGAAGTCTTTGATTTTCAAGCTTGAAAAATCTTCAGATTGGCTCATGAGGATTTCAATATATTTTTAATAAAGTGAACTCTCATCCTTTGTATAGCAGTTAACCTGAGTCAACTTGATACTCAAAAATCATGATTTTGAGATTAAGTTAGCTGTAAAGTATCCTGGTATGTAATAAACACCCGCATCCATTCTCAGTAATTTCTCCTGTATGCTTCTCGAAGTTATATTCAAACAAGAAGACTTCTAATGTTTGGCATTGCACTAGCTAAAAATCCTACAAGCTGAGTATGTCCAAGTTGTAATCCACTCGATTGAATAGTAAAAGAAAAGTACCTCTGTATTTAGGTCTTCCAGCAATTCTGAAAAGTAGGGTATTTCGTTTTGCTCCTCTTTTTTTAACCCCTTCAAATGCTGATAGTGCAGTGCAAAAGTCAGCATATAAAGAAAGGAAAAATAAAAACAAAAGGATGTGCGTACTAAACGTGAGAGGGTTAATTAGGATCATACACAACAAGTTTATCCAGTTACTATCTTGATGATAGTATCTTTAATCTCAAACGCTTCTGATATAAAATTTGTTTATCTTATAATACTTGTGTTATAGATCCACTATTTTTCTAACCTCAGTGAACTTGGAGAAAATGGTTTTTCCATCTTCATTGTTTGGTTGTAACAGTTGCTTAAAATGATGATGACTGATCCTGATGACTTGGGAGAGTCTTCTAGTTCTCACTGTAAATGGCTGTGGGATATTCAACATCACAGCAATTTCCCCTGCCATTTGTGGAGATTCCAGCTTTGACAAAATCTGAAAACCAATCATGCAAATATATAAAAAAGAGTGAAAAGATTCAGGTTCATTGGATTTTCCTGTCTTTTTCCCGGTTGAGGATGAAAAAGTTCTCAGTACATGCGTAATGCAGATGCAGCAGCCACCCTTCCATTTTAAACATCATTGCGCAGTATCATCATTACACAAATTGTTTTGCTTCTACTTGATTGTTTTGAGAACTAGCAGATAAATCTATCTTGTTTTGTTTAGAGTGACTTGGAAGACTAGGGAGACTGCTTACCTTGGAATGGGGTTATCTCCTAATATTAGGGATGTCGTGCTCCTTTCCAATCTCCATGCTCGGAAAGACGTTATATCATAATATGGATTTTCCCTTCCTGATGTCGTTCATGACAGTATTTTGTACATTTTGTCAATTTCTTATGCAGGAAATTTTCTTGAGCATGAAATGTGGACCTCAAAGTTTGACTAGAGCTTGAAGAATCAACTTGTAAAGATAGTTGGACTTTATGATTTATGAATGAATGGGATATTATCTTCTGTTGGATGGTGCAGACAATACGCTATTTTTGTTTAGTCTACAATTACTACCAGAACACATCCTCATCTAATCCTCTTCTGTTGTCTTGCCTTCAGTTCTGGTTTATTAAAATTCAGGATGTGCACTGCTTGTACTTTATCTGAATATCCTTCAATTGCCAACCAAATTATCACTTCAACGCAACATAAGTTTTCTCAAGGATACTGGAGTCCAATTAGATATTTATTTAAAACGGGTTATAGTTTTGTGCTTTGGTTTTCAAGGATGGTGGTTGCTGAACAAAAGCTCTCTCTCTTCACTCTGGATCTTCTAACGATTTAAGTTCTTTTGCCACCAACTTTATTAGACTCTGATATTATTTTTAACTGCTCAGAATGACCTTGCTTGAATAGGATAGAACCTGTTTTATAGTCTGTACACCTATGTTTTGAGTTTATTTTAACTGTTTAGAATATTGTCATAAATACTTCATAGTCTAACTTTCCTTGTCAGAATATGTAATTTGGCATGAATTGCTAAACTTTCTTGCACCATATAATGTAATGCATAGAGATAGGCAATAATCTTTAAACTCAACTATGAACTTCTCTATGTTACCTGTTCAGTTCCAGTCCTGTACGAGATCACATCCTGCATTTTCATAAATGTAGTTCAGATTTTATTCCAAGAAAACATGGAATGCAGATAAAAAAACACAAGATATTACATACCACTGCTCCAGACACCAAAATGTAGAAATCTGTTGGTATCTCGTTTTGTATTATAATGTCAACTTTAGGTGGAAAGTACTCTGCTTTCATCTCAGACACCTGCACAAATATATTATAGGCCATCAGGATAACTGAGAATAGCAATTAAATGTAATGGCTGGGATATTTTCCAGACATTCTTCCGTTAAATGGTGAAGGTAAATGCTCCAAAGTTCTACGTTTTACTTCATACTGTATGACTTGGGAGTCTGTTTTAAAACTCTTTTTTTGTGAAAATCATCATCTCTTGAACAGGGAAAAAGTTCTTTTACCAATTGGACGATAAGGTCTTCAGAGAGCCCCTTGAATAAGTATGCATTCTCCACGGTATGACGGAAAAGGTGCTGGGCAATACTGGATCTGATTGCTTTAGGTAAATCCTCCAACACCTCTTCTTGCTTCAACTCTGCTGTCTTGAACTTGAGTTGCATGTGCGCCAACATTTGATCTTTCAGGCCTTCTGGCAGTCTATTCTTGCTTCCATAACGCAATATCTCATTTATGGAATCCCTCTGGTAAGTGATAATAAAGTTTGTTTATTATGAAGTGTAAAGCTAAAAGAGAGATTAGAATGTCAGATGGTTTTGTGCTCCGTGTAATTGTAGGACAAGAACATCAATAGTAAAAGGAGTCAATCATTGGCTTGTTGCTTCTTGCTTATTAAAAAAGTATGGAATTTGTTCATATTGAACCAGGCTTCGGCCAGTACCATTGAATACTAATTTAATAGATTCAGTGCTTGCAGATTTAAAATTATGTTTTCTATTGTCTAAACCATTGATTATTGCCAAAACTTGGACATATTTACAATGCAAGATTCTTGCAGTAGCATTTTCTTGTTCCATTGCCGGTAGGCTTATCACAAATACTATGCTTTCTATGTTAGACTGGTTCTATGTTACTGTAGATGAGTGTGTAGAGGGAGCCCCTTTTTGTGGGCTTGGTTTTTGTATACCTTTGTATTCTTTCATTTTTTCCCAATGAAAGTTGTTTTCACTAAATAAAAATTAATTAATCAATTAATTAAAAAAAAATTGATTTGAGTGTGTAGAGAAAAGGATAAATTACCATGATAAATGTTCGGATAGCACCGTGAACAATGAGATTTGTCATGTTTCCTATCAAATAAGATGTGAGGCCAATGTTGAATAGCATGTAGAATATGCTAAAAATCTTCTCCCCTAGATTGACTGCATGCAAGTCCCCATAACCAACAGTAGCAAGTGTGACAATGGACCAATATATCGAATAGGTGTACCCAAGCCAAATACTTCTGTTCTTAAACTCTTCGACTTCAAGTCCAATCCATGTGTTTGCTGAATCTTTATGATGAACTGCTAACCAGTAGTAGAAACAACCAGCTGAATGAACTGCTAACAGTGTAACCTGTCATAGGTAGTCAACCCAAAGGTATTATACTTCAATTTAAGCAGTGGTCTGAGAGTAGAACGTTACAAGTAAGTTTGTTATCCCAGGAAAGATGTCTTACACAAATTAGTTTGGTGAGTCTTGTAAAAAAGTAACTAAAGCGTATGTCTTTCTCCAGCCTGGATTTGAGGCAGTTTGTCAGTTAGATTAGTTATGAACTGAACTTGCCAAGTCCTTTTGAATACATATGTAGCAGTTTGCATTTTTCTTTTAAAATCTTTACTACCAAATAATTAATTTTATTATAATTCGAAGTGCAAGCAATCGATTACCTTGTGAAGAGTTCACTAACACGCCTTAGTCGCCAGAACCGAAGTAAGTTGAGGAAGCCGAAGGCCTCACTGCGGTGCATCTCTCCAGTGAAAATTCTGTATATTACCTGAAATGGAAGAGTGGATGCTACGTCCATGGGGAACCACAGGCTTGTAAGGTAACTGTAGCAACACAATTTTTTATTAATCCAATAGCTGTTCTGTAGATTTTAAATTTGGCTTCAGTAATTCATTTCACTATTGTTTGCAATAACCATGAACCCAAGTCATATCATATAATATGTTTTTTACCATTACAATGTACATCTTATTCAATTCAATTTGCAAACTTGAATATAGCTTAGTTGATTAAGGCATAAGTTTCGACCAAAAGGTCATAAATCCGATCTCCCCACCCACTTGTTAAACTAAAAAAACATATTCAATTTCATTTCCTCTTTTATTTTTTATTTTTGTCAGAAAATAATCATATTATTTTAGTGTCCTCTATTTAGGACTTCTACATGTGTGCAGTTGTCGTCTTGTGCTAAATTGTGCTGTCGTGTCCGTAATGACAAAACAGAAAAATTACCATTAGATGTGAAAATTATTGTTCCATTTTAAAAACTGACTACTGTTCCCCCTTCCTTCAGATCTTGAAAACACTTCAATTTCCAAAACTAGTTGATGGAAGAAGAAACCCCAAAATGGATTCAAACCAAAACACTACTTGGAATTGATAAAATTAACATACCGTACAGCTATCTTCTTATGATCATCAACAAGGAGATAGGTGTCTTTATCCAAGTACGCGACGAAAAAGGTCAACACAATATCAAGGGCAAAGAATGCATCCACCACCAAATCAACGGGTAAAAGAGACCCAGTTGCCACTTTCTTGAAGGCAAGTTCAAAGGGAGATGCCCACGCTGAGTACACCACTAGCACTACCAGGAAAGTTTGCCACCACCTGCATTGCATCATCATTCATATTCCAAAATGCCCAACCAAAGTGGTCCGCTCCTTTTTCTCTCCAAAAGCAAGTAAGACAAAATTCCTTGCTTTAGACTAATTTTTCAAATTCTAATTATTAATACATCAATTTTCTCTCAAATACACCTTCATATCATACTATAAATCATTTTTATTGAATATGTTCGTTCATTTACAACTAATGAAATTCATCCTCATATACGACAAGTGAGAAAAAAAAAATTTATTGAGCAGAACAAGCTAAGCACTAAGATCAGCTAAACAAAGGGCTAGGGGATCATTTATATTATCTTAAATTGGGAAGTAGCAAATTATGAATACGAGTTTAAGAGAAAATTAGAAATACTGATGGTGTGTAAATTTAAAACTTAAATCATATTCTCTCTTTTGACTTGCATCTACTCGCTTGTTTATCTAGCGGTATTGAATTGAAAAAGATGAGTTGTTGAATTAACTTACCGATATCTTCTGTCATACGGAACTATAACGAACTTGTTCAGGTGCGAGTATCCATCGTTCACAATTGTTCCAAACGCCGGCAAGAGGCTGCTGGAAACCGACGTTAAGTTCTTTATTTCGCCACTTGAGTGCCGCCGGAACAGCAAAGGTATCGGCGACCTTGTTTCGGACACTGGTGTCGACATTGTGTTTCAGCCTTCTGCAAATTCTATGATCCAGAAAAAAGAGAGTCGGTTTTCATGCATGCCTGAGACTTTTTATATACATAAAAGAGGTAACTTTTATACTCACACCCGTGAATTCAACTGAATATCTATTAATTAAAGCCAAAGGGGAAGGTGGTAATGAGCTTTCGTTGAATTGGTGTTCTGTATGGTAAATAAAAAGACGATCATCTCAATGACAATTATACATGAAAGATACGATTATTTTATTTTATTTTATCTTATTTTATTTTATTTTATTTGGTGATCCAAGTTGACTTGCATTATTCTATGAATGATCCCATGCTCAAGAGATTGGCTTACAAATACTTTGCAATTAATAATTGTGATTTTTTTTATATGCTATATGTGTGTATTGTGAAGGAAGAGTTGACTCTTAATTTCAGGACTTCAACAGGGAAAAAAAGGAAAATGTTGCGTTGGGATTGGTGCGGTATAAAGATCTGGAGAAAAGGCAAATATCTTTTACCATCCAACGATAATTAATATACGGTAACTTTCTCGCTTCTTTAAATAGACATTATTCAAATTCATTAGGAGGACCTAGTGCAGATTCTTCTATGCATTATATATATACATATACACAAACAAACACCTTAGTTTAACCATGGGGAAACTGGAAAAGAGAGAGAGAGAGAGAGAAATAAAGAAAGAAAGAAGCTTACTCATAGGAAAAATGGCAAATCTGAGGTCAGAATACGATACCAGTGAATAAATCATTGTGAATGTGTGAACTTAATCTGAGAACTAATCATTTTATTCTTTTTCAATAGAAAAAGAATGTATTAATGGTTCATAAATTGTCACTGTGGTTCTTTTAATGGAAAATATTTATAGATTTGTGCACATGGAAAAAATTTTCTACTTTATGTCCGATTTTTTCTGCTGTTATTTAGCCATTAGATATTTTCTTTCCTTTTCCATTTTTACCTACCAGTGTCATGCAACTAGGGATATTTTAGGTTTGGTAATTGTATTTTGGGAGAGCCAGCTTGCTGTACCCATTTTTTGCATCCAAGTCTGGCACAACAAATTTTTTTTTTTTTTTAGGTCTTGTAAATTGGCCTAGATGTTAGCCTTTTCTTTTAGCCCCGTTTGATTTTTAGTGGTTAATTTTAAAAAATTTAAGTCTATTAACAAATCTTCTATTTTTTTCTTTGTTTATTATCTACTTTTTAACTATATTTTCAAAATTTAAGTCAAATTTTGAAAATTAAAAAAAAAGGTCCGTTTGGTAATAATTTCGTTTCTTGTTTTTAATTTTTGAAGATTAAGACTATTTTCTCTCAATTTCTTATAATAGTTTGCATCTTGGTAAAGAGTAGATAACAATTAAAATATGAAATTTTGGAGTAGAAGAAGTTTTTAGGCTTAATTTTTTTAAAAAAATGAAAACTAAAAATCAAATGATTATCAAATGAGGCCGTAAATTTTAAAAAACATGTTTTTGTTTCATGTTTTTAAAATTTAGCCAAGAATTCAAATCAACCATGGTAAGAAAATGAGAGAAAATATGTTTAATTTTCAAAAACCAAAAGCCAAAAACAAAATGGTTACCAATTGTATTTTATTTTTGTTATATTTGTAAATATTTTGGTTTATTTTTCTATATTTGAAAAATGTCTTGAATTTTTTTTTTTTGTTGTACTTTTAAAAATTATATATTTTTATTATTTTAATATTTCATACTTCAAAAAATATATAATATGTGAGATCAGTATAGAAAATTACGATTGATTGAATATTCTCAAACTAAATATTTTTTACAAAATTATTTTCTTTATGAATCCATCATTTATACACCTAATTGAAAGCGTATAATTATATGTTTTTACCTAAAAACTAAATCTCGCAGCCATCAAATGCGCAGACTCACTCTATACAAACAAATGTTATAATGTAACAAAGACTCAACTATATTTTCTTTCCCTTTTTCTGTTTTTTTAATTATTATTTTTCACTTTTTCACTCTTTCATTTTTTTACTTTTTATTTTTTGTGTGTGCATATGGCAAATTAAAATAATGAAAATTTTGAAAATCTGTAAGGAAAAAGAACACTTGAAACTTGGCACATCGGAATGTGTCACGTGGCTGGGTTGTTTTAATTATTTTGTAATTAAGTTTTGTTCTAGATACGGTTTTTGATTTACGCGTTTTTAGAATGAATCTTTATATTCTTTTCGATTTTTTCTTTTTTGACAAATATATTCTTTTCGATTTTGAAATTTAATATCGACCAAAGATTTATTATTCTTTGAAATCAAATATGGTTAGTTGAAATTATAATGCCTTAATTTTTCTTGAAGCCAGATTCAAATTGGCAATGAAATTAAAATACTTAACCTTTTCTTTTTTCCTTCTTAACTATTTTTGTTTTTGTCAAGTTGGTTTCAGTTTTTTTTTCATTTACGTTTTTTTTAGTCTTAATTACCTACCATCTTTTTTTATTATATAATTATTTGACTTTTTTTAATATAATAATTGCAGAGATGAGAGTTCAAGTAATGCATGTCAATCACCATTGACTTAAGCTTGTTTTGAAATTATTTTTCTAATTGCATTCATAGTGTATATATATATGTGTGTGTTTTATGTCGTAGGTTTTGTGTATTTCTAACCAACAAATATGTTGATTTTTCATGTGTTGGATAACTTTTGGATAAATTGAAATTGCAACGTAATTTGGTGCTGCAATGGTAAGGTTACAAGTGTAATTTATTAAAGAAATTTTTTCTATATTTGTATAGTAATTTTTCTTTTTTTAAACTATATTTTTAATTGTTATTCGTCAAATTAGATTGGACTAGATATAAAAACATAGAAGCAAAATAAAGCCTATCTCAACAGTTAAAACATCTGGTCTTTTCTTAGGAGTGGACTCTCACATTTGTATTAAAGAAAATTAAAAATAAGGCCATAATTGAAATTTGTCTTCTAGAGAAAATCCAAACCAATCAATTAAAATTTCAAATTCTACGACTAAGAACACTTCAGTTATTTCGATGAGTGATAATAATAATAATAATAACAAGCGTCAGATTGCCAGAAAAACTTGACAAAACAAGAACTAAACGTCGTAAAGTGGTTGGCCCCAAATATAATAAATCGTAGAAAATTATAATTAGAGTCGATTGACCCCCCTTTTTTTTTTTCATAAATAATATAAAAACATAATTTTTTTTAGTTCAATTGTAGTAGAGATAAGAGATTGAACCATTGATCTTTTAGATGATAATTAGTGTCTTATTCAATCGGCTATGCTCGGATTGATACAAAAAATTTAGAATTAAATGTATACATCAAGATGATATTGTGTACAATAGAACGTGTAAAGGTTGTGATCTTTCAGGATGGTATTGTTTTGACTCTTTAAACATGAATTTCTCTTTTGTGGATATTGAAACATATTCGTTAATTTTTTGAAAACTTCTTATAGGAAGATACCATTTTAATAACGAGTTCCAACTTATTGTCGATAACATTCAGACCTAGTTTTAGTATGGGCGGATTTGAGGTTTTATTTTGCTTCAATATGCTGCAAAACTGTAGTTCACACCCTTGTTAATCATGCTCAAATAACAAACTCCGTTAAAACATGGTTAGAGACCACCCACATGAGTGAATGATATTCTAGCGACTCCTTTTTCTTCTTATTTGTCCTATTTTCCTTCTTTCTCCATCTGGTACTAAATAAAAATAAAAAATCATACAAAAACGAAATCAAAACTAAAATAAACAAAATACATCCATCTATTTAAAATGCTTGAAAATTGGGTATTTATGACATCCATTAGCCATGCTTATGCAATGTGCAACCCATTCATTTTTTTTTAATGCACCCTTTGACATTTACAAGGGAAGACTTCCATATCTTAGACTTTTAAATTTGGTGATGAGGTGGGAAATTAAATTAAATATCACAAATATGTTGAAATCTAATTCCCTTGTTAATTAACAAATGAAATGTAAGCTTTTATTATTACTATTTATTATTTATTTATTTATATCTTATCTACTAATAGGATAATGTTAATAAATGGACACAACAAAATATAATTTAGGGGGAGAGAATGCAACTCATAGTTTATTCAACATGTGAATGTGAAAAAATTCATTTCAATTATACATCTAAACCAATTGAGGTATGCTAAAAAAATTAGCCATAAATATATTTTAACCTAATTTAATTCCATTGATCAATCAAAAGCTGACTTTGGAGTATACAATAATATATTGTTGCAAGTTGCAAATACAAGGGAAATTTTTTTATTTAATCTAATTCCATCCAAACGAAATGGTCGGTTGGAGTCGAAATTAAATACAAGAAACATACATTATGACTTGAGCAAGATGTACAGCCAATCAATCTCTGAAGGTGATGACAAGATAAGAAAGGAATTTAATTCTTAAGACATCTCATTTACAAAGTGGAGTGCCACATTCCTCTGCCTGCTCTTGCCTCTCAAAGCTGTACTAAAAGGAGATTTAGTATAACACACACACACATATATATATAAAGAAATTAACATTACCTACATAAAGCTTACAATAAAATGCCCTTGTTATATCTCTCTATTTATTTTTTTTGTAATTCAGGTTCAGCTTTGTGATCTTATCCCCATACATCTTCCATTGCTGAAACTGAATAGCCTCACCCTGGAGCACGAAAAAATGTCCAAAAATATGATTACATGTACACAAAATATCGGGATAATTGCGAACTCCTGGAACGATTTAACCGGTATTCCCAATTGATTAAGCGAATTGACTTTTCTTCAAAGTCACCTCAAGCAGTATCCCAAGCAAAAACAAGCTCGGTCCTGCTGGAACTACCAAAGCAATTGACGTTGAACCAAGTAAATGATGGAAGGGAAGTTGCCAGAGACTATGTAGGTAGAAGACTGAACGGCAAAATCTGTTCGATTGAGGTGATTACATGTATTGAGCCAACCACTGCTTACACATATCGAGCACGGGCAGGGCGTTCGCGTGCAGTGCCTAAAAGAGAAATGTACCGCACAACCTGAGTTATTGTTTCTAAATCAAGCATCAAAAGCACAATAATCTTCACATTGATCAACATTTACATTAACATCAGAAGGG

mRNA sequence

ATGGCCAATATATCACAACAGGCTCAATCGGCTATGGAGAACATGCTTAGAATGATCAGTGAAATTGATCAAAACGCTGTTGGAATAGTGGAAGATATAGAGAAGTGCAGGGGTTCTTCTCTTGACAGGAAGGGGGTGCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACATGCTCAACAATGGAGGGGGAACGCTGTGCGAGTATCCATCGTTCACAATTGTTCCAAACGCCGGCAAGAGGCTGCTGGAAACCGACGTTAAGTTCTTTATTTCGCCACTTGAGTGCCGCCGGAACAGCAAAGGTATCGGCGACCTTGTTTCGGACACTGGTGTCGACATTGACTTCAACAGGGAAAAAAAGGAAAATGTTGCGTTGGGATTGGTGCGGTATAAAGATCTGGAGAAAAGGCAAATATCTTTTACCATCCAACGATAATTAATATACGGTTCAGCTTTGTGATCTTATCCCCATACATCTTCCATTGCTGAAACTGAATAGCCTCACCCTGGAGCACGAAAAAATGTCCAAAAATATGATTACATGTACACAAAATATCGGGATAATTGCGAACTCCTGGAACGATTTAACCGGTATTCCCAATTGATTAAGCGAATTGACTTTTCTTCAAAGTCACCTCAAGCAGTATCCCAAGCAAAAACAAGCTCGGTCCTGCTGGAACTACCAAAGCAATTGACGTTGAACCAAGTAAATGATGGAAGGGAAGTTGCCAGAGACTATGTAGGTAGAAGACTGAACGGCAAAATCTGTTCGATTGAGGTGATTACATGTATTGAGCCAACCACTGCTTACACATATCGAGCACGGGCAGGGCGTTCGCGTGCAGTGCCTAAAAGAGAAATGTACCGCACAACCTGAGTTATTGTTTCTAAATCAAGCATCAAAAGCACAATAATCTTCACATTGATCAACATTTACATTAACATCAGAAGGG

Coding sequence (CDS)

ATGGCCAATATATCACAACAGGCTCAATCGGCTATGGAGAACATGCTTAGAATGATCAGTGAAATTGATCAAAACGCTGTTGGAATAGTGGAAGATATAGAGAAGTGCAGGGGTTCTTCTCTTGACAGGAAGGGGGTGCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACATGCTCAACAATGGAGGGGGAACGCTGTGCGAGTATCCATCGTTCACAATTGTTCCAAACGCCGGCAAGAGGCTGCTGGAAACCGACGTTAAGTTCTTTATTTCGCCACTTGAGTGCCGCCGGAACAGCAAAGGTATCGGCGACCTTGTTTCGGACACTGGTGTCGACATTGACTTCAACAGGGAAAAAAAGGAAAATGTTGCGTTGGGATTGGTGCGGTATAAAGATCTGGAGAAAAGGCAAATATCTTTTACCATCCAACGATAA

Protein sequence

MANISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTLCEYPSFTIVPNAGKRLLETDVKFFISPLECRRNSKGIGDLVSDTGVDIDFNREKKENVALGLVRYKDLEKRQISFTIQR
Homology
[Close]
BLAST of Lsi04G021690 vs. ExPASy TrEMBL
Match: A0A6J1IGC1 (uncharacterized protein LOC111476676 OS=Cucurbita maxima OX=3661 GN=LOC111476676 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 9.6e-27
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 3   NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVL 62
           +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVL
Sbjct: 36  HISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVL 95

Query: 63  DMLNNGGGTL 73
           DMLNNGGGTL
Sbjct: 96  DMLNNGGGTL 105

[Close]
BLAST of Lsi04G021690 vs. ExPASy TrEMBL
Match: A0A6J1FEZ1 (uncharacterized protein LOC111443468 OS=Cucurbita moschata OX=3662 GN=LOC111443468 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 9.6e-27
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 3   NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVL 62
           +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVL
Sbjct: 36  HISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVL 95

Query: 63  DMLNNGGGTL 73
           DMLNNGGGTL
Sbjct: 96  DMLNNGGGTL 105

[Close]
BLAST of Lsi04G021690 vs. ExPASy TrEMBL
Match: A0A0A0LJE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881050 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.8e-26
Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 3   NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVL 62
           +ISQQAQ AMENMLRMISEIDQNAVGIVEDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVL
Sbjct: 34  DISQQAQGAMENMLRMISEIDQNAVGIVEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVL 93

Query: 63  DMLNNGGG 71
           DMLNNGGG
Sbjct: 94  DMLNNGGG 101

[Close]
BLAST of Lsi04G021690 vs. ExPASy TrEMBL
Match: A0A5A7TBQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007070 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0 

Query: 3   NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVL 62
           +ISQQAQ AMENMLRMISEIDQNAVGIVEDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVL
Sbjct: 34  DISQQAQGAMENMLRMISEIDQNAVGIVEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVL 93

Query: 63  DMLNN-GGGTL 73
           DMLNN GGGTL
Sbjct: 94  DMLNNRGGGTL 104

[Close]
BLAST of Lsi04G021690 vs. ExPASy TrEMBL
Match: A0A1S3CR82 (uncharacterized protein LOC103503784 OS=Cucumis melo OX=3656 GN=LOC103503784 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0 

Query: 3   NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVL 62
           +ISQQAQ AMENMLRMISEIDQNAVGIVEDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVL
Sbjct: 34  DISQQAQGAMENMLRMISEIDQNAVGIVEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVL 93

Query: 63  DMLNN-GGGTL 73
           DMLNN GGGTL
Sbjct: 94  DMLNNRGGGTL 104

[Close]
BLAST of Lsi04G021690 vs. NCBI nr
Match: KAG7024488.1 (hypothetical protein SDJN02_13304 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-26
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 3   NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVL 62
           +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVL
Sbjct: 38  HISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVL 97

Query: 63  DMLNNGGGTL 73
           DMLNNGGGTL
Sbjct: 98  DMLNNGGGTL 107

[Close]
BLAST of Lsi04G021690 vs. NCBI nr
Match: XP_022976221.1 (uncharacterized protein LOC111476676 [Cucurbita maxima])

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-26
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 3   NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVL 62
           +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVL
Sbjct: 36  HISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVL 95

Query: 63  DMLNNGGGTL 73
           DMLNNGGGTL
Sbjct: 96  DMLNNGGGTL 105

[Close]
BLAST of Lsi04G021690 vs. NCBI nr
Match: KAG6591596.1 (hypothetical protein SDJN03_13942, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-26
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 3  NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVL 62
          +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVL
Sbjct: 28 HISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVL 87

Query: 63 DMLNNGGGTL 73
          DMLNNGGGTL
Sbjct: 88 DMLNNGGGTL 97

[Close]
BLAST of Lsi04G021690 vs. NCBI nr
Match: XP_023535872.1 (uncharacterized protein LOC111797169 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-26
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 3   NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVL 62
           +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVL
Sbjct: 36  HISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVL 95

Query: 63  DMLNNGGGTL 73
           DMLNNGGGTL
Sbjct: 96  DMLNNGGGTL 105

[Close]
BLAST of Lsi04G021690 vs. NCBI nr
Match: XP_022937053.1 (uncharacterized protein LOC111443468 [Cucurbita moschata])

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-26
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 3   NISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVL 62
           +ISQQAQ AMENMLRMISEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVL
Sbjct: 36  HISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVL 95

Query: 63  DMLNNGGGTL 73
           DMLNNGGGTL
Sbjct: 96  DMLNNGGGTL 105

[Close]
BLAST of Lsi04G021690 vs. TAIR 10
Match: AT5G25570.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages. )

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-17
Identity = 42/70 (60.00%), Postives = 57/70 (81.43%), Query Frame = 0 

Query: 1   MANISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYT 60
           +A +SQQ Q  MENML+M+ EIDQN+VGI E+IEK +  ++++K +LEEEK QFQ+AAYT
Sbjct: 62  IAEMSQQVQMGMENMLKMVYEIDQNSVGIKEEIEKSKDFAMEKKRILEEEKDQFQKAAYT 121

Query: 61  VLDMLNNGGG 71
           +LDML+N  G
Sbjct: 122 ILDMLSNSRG 131

[Close]
BLAST of Lsi04G021690 vs. TAIR 10
Match: AT5G25570.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 4.0e-17
Identity = 41/67 (61.19%), Postives = 55/67 (82.09%), Query Frame = 0 

Query: 4  ISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLD 63
          +SQQ Q  MENML+M+ EIDQN+VGI E+IEK +  ++++K +LEEEK QFQ+AAYT+LD
Sbjct: 33 MSQQVQMGMENMLKMVYEIDQNSVGIKEEIEKSKDFAMEKKRILEEEKDQFQKAAYTILD 92

Query: 64 MLNNGGG 71
          ML+N  G
Sbjct: 93 MLSNSRG 99

[Close]
BLAST of Lsi04G021690 vs. TAIR 10
Match: AT5G25570.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 4.0e-17
Identity = 41/67 (61.19%), Postives = 55/67 (82.09%), Query Frame = 0 

Query: 4  ISQQAQSAMENMLRMISEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLD 63
          +SQQ Q  MENML+M+ EIDQN+VGI E+IEK +  ++++K +LEEEK QFQ+AAYT+LD
Sbjct: 33 MSQQVQMGMENMLKMVYEIDQNSVGIKEEIEKSKDFAMEKKRILEEEKDQFQKAAYTILD 92

Query: 64 MLNNGGG 71
          ML+N  G
Sbjct: 93 MLSNSRG 99

The following BLAST results are available for this feature:
BLAST of Lsi04G021690 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi04G021690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IGC19.6e-2794.29uncharacterized protein LOC111476676 OS=Cucurbita maxima OX=3661 GN=LOC111476676... [more]
A0A6J1FEZ19.6e-2794.29uncharacterized protein LOC111443468 OS=Cucurbita moschata OX=3662 GN=LOC1114434... [more]
A0A0A0LJE04.8e-2695.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881050 PE=4 SV=1[more]
A0A5A7TBQ01.1e-2594.37Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CR821.1e-2594.37uncharacterized protein LOC103503784 OS=Cucumis melo OX=3656 GN=LOC103503784 PE=... [more]
BLAST of Lsi04G021690 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7024488.12.0e-2694.29hypothetical protein SDJN02_13304 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022976221.12.0e-2694.29uncharacterized protein LOC111476676 [Cucurbita maxima][more]
KAG6591596.12.0e-2694.29hypothetical protein SDJN03_13942, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023535872.12.0e-2694.29uncharacterized protein LOC111797169 [Cucurbita pepo subsp. pepo][more]
XP_022937053.12.0e-2694.29uncharacterized protein LOC111443468 [Cucurbita moschata][more]
BLAST of Lsi04G021690 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G25570.31.4e-1760.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G25570.14.0e-1761.19unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
AT5G25570.24.0e-1761.19unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36800POLYAMINE-MODULATED FACTOR 1-BINDING PROTEINcoord: 3..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G021690.1Lsi04G021690.1mRNA