Lsi04G019790 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G019790
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	zinc finger BED domain-containing protein RICESLEEPER 1-like
Location	chr04: 26848631 .. 26851000 (-)
RNA-Seq Expression	Lsi04G019790
Synteny	Lsi04G019790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATGTCTAACGACTCATCAATCAAGAAACCGAAGAGGTTGACATCGGTAGTTTGGAATCACTTTGAGAGGGTCAGAAAGGCTGACATTTGTTATGCTGTTTGTGTGCATTGTAACAAGAAGCTCAGTGGCTCAAGTAATAGCGGAACCACACATCTAAGAAATCACTTGATGCGATGTCTAAAAAGATCCAATTATGATGTTTCTCAACTACTTGCGGCCAAGAGATTAAAAAAGGACAGTTCAAGTGGTCTTGCAAACATCAGCTTTGATGAAGGGCAGAGAAAAGATGAGTTTAAATCAGCAATTGTGAAATATGATCCAGATCAGAGAAGGGATGAAGTAGTCACCATTGCAAGTAGTAAGTTTGATCAGGAGCGGAGTCAGAATGATCTTGCTCATATGATCATATTGCACGGTTATCCATTGTCTATTGTTGAGCATGTAGGGTTTAAAGTTTTTGTCAAAAACATTCAGCCGTTGTTTGAGGTATTACCCAATAGCACTGTTGAGGTTTCTTGTATGGAAATCTATCAGAAGGAGAAAGAGAAGATTTTTGAAACTATTAATAGATTGCAGGGTAGAATTAACGTTTCGGTTGAAATGTGGTCCTCATCAGAAAATATTGATTATTTATGCTTGGCTGCACATTATATTGACGAGGATTGGAAATTACAGAAGAAGCTTTTGAATTTTGTCACACTTGATTCTTCTCATACAGAGGACATGCTCTCAGACGTGATTATTAAATGCCTGATGGACTGGGACATTGACTGTAAGCTATTTGCACTGACATTTGATGATTTTTCAACCAATGACGAGATAATCAGAAGAATTAAAGAACACATATCGAAGAAAAGGCCTCTTTTGAGTAACGGTAGACTATTTGACGTATGCTCTGCTGCACATACCATAAATGCGATCGCTGAAGACGTGATAGAAGCGATGCGAGAGGTTAACCAAAAGATCCGAGGGAGTTTTAAATATATCAGAAGTTCACAACTCACTCAAGGGAGGTTCAATGAGATGGCTCATCAAGTAGGGATCACCAGTCAGAAGATATTGGTCCCTGACAGTCCTGGTCAATGGAATTCAACATATTTCATGCTCGAGACAGCCGTGGAATACAAGGGTGCATTTAATCTTCTACAAAAGCATGATCCTCATTATGCATCAGCTCTTACTGCTTTAGAGTGGGAATGGACAACTAGTGTTGCTGACTATTTGAAACTTTTTGTTGAAATAGTAAACATCTTCTCTGGCAACAAATCTACTACAGCAAATATATATTTTCCTGAGATATGCGATGTTCACATTCAATTAATCGAGTGGTGTAAGAGCTCAGATAATTTTCTCAACTCCCTTGCATCGAAAATAAAGGCCAAGTTTGATAAATATTGGAGCAAATGCAGTCTGGCTTTGGCAGTTGCTGCAGTTCTAGATCCAAGGTTCAAAATGAAATTGGTCGAGTACTACTATTCGCAGATTTACGGTAGTACGGCCTTGGATCGTATTAAGGAAGTTTCTGATGGTATCAAGGAACTTTATGATGCATATTCAATCTGCTTTACAATGGTTGATCAAGGTTCAGCTTTGCGTGGAAGCAGTTTACCTGGGACGAGCAACGACTCTAGGGACAGGCTAAAAGGATTTGACAAGTTCCTTCATGAGACTTCTCAAGGTCAAAGTGTGATGTCTGATTTGGACAAATATTTAGAGGAACCAGTGTTTCCTCGAAACTGCGATTTCAACATATTAAACTGGTGGAAAGTCCACACCCCGAGGTACCCAATCTTGTCCATGATGGCTCGTGATGTTATCGGGACTCCAATGTCAAGCATTGCACCCGAGTTGGCATTTAGTACCAGAGGCCGAGTTCTCGACCGCTGTCGAAGTTCATTAAGCCCTGATACTCGTCAAGCTTTAATATGCGCACAAGATTGGCTTCGTATAGAACTTGAAGGTATGTGCATAATGGATTCTACCTAATATGTTTTTTCTTCTTTTACTTACAACTGTTTATTTTTTTTCGTTTCATATCAGATCCGAGGCCATTGTCTACCGCTTCGTACATACCGCTCCTGCTCGGAACCAATTAACTGTACAAATAGGTGCCTGGTGTCATGTAAATATCTTACTGAATATCTACCTCACTCCATTGTTTTGTTTTTTTATAATGTTAGGTTGATGGATCTGTTAGTTTATACTATAATGGATTCTGATTGTTTTTGAGGCCATAGCCTTGTCCAAGTGAGCCATGCTGTACATAATGAAATTCTGTTTCTTCTGAATGTCTGTCTATAAATCAGACAATGGGCAAAATTTGTATGTTTTTGCTGGTAATAAGAATTGTAAATATTCAGATCA

mRNA sequence

ATGGAGATGTCTAACGACTCATCAATCAAGAAACCGAAGAGGTTGACATCGGTAGTTTGGAATCACTTTGAGAGGGTCAGAAAGGCTGACATTTGTTATGCTGTTTGTGTGCATTGTAACAAGAAGCTCAGTGGCTCAAGTAATAGCGGAACCACACATCTAAGAAATCACTTGATGCGATGTCTAAAAAGATCCAATTATGATGTTTCTCAACTACTTGCGGCCAAGAGATTAAAAAAGGACAGTTCAAGTGGTCTTGCAAACATCAGCTTTGATGAAGGGCAGAGAAAAGATGAGTTTAAATCAGCAATTGTGAAATATGATCCAGATCAGAGAAGGGATGAAGTAGTCACCATTGCAAGTAGTAAGTTTGATCAGGAGCGGAGTCAGAATGATCTTGCTCATATGATCATATTGCACGGTTATCCATTGTCTATTGTTGAGCATGTAGGGTTTAAAGTTTTTGTCAAAAACATTCAGCCGTTGTTTGAGGTATTACCCAATAGCACTGTTGAGGTTTCTTGTATGGAAATCTATCAGAAGGAGAAAGAGAAGATTTTTGAAACTATTAATAGATTGCAGGGTAGAATTAACGTTTCGGTTGAAATGTGGTCCTCATCAGAAAATATTGATTATTTATGCTTGGCTGCACATTATATTGACGAGGATTGGAAATTACAGAAGAAGCTTTTGAATTTTGTCACACTTGATTCTTCTCATACAGAGGACATGCTCTCAGACGTGATTATTAAATGCCTGATGGACTGGGACATTGACTGTTCAGCTTTGCGTGGAAGCAGTTTACCTGGGACGAGCAACGACTCTAGGGACAGGCTAAAAGGATTTGACAAGTTCCTTCATGAGACTTCTCAAGGTCAAAGTGTGATGTCTGATTTGGACAAATATTTAGAGGAACCAGTGTTTCCTCGAAACTGCGATTTCAACATATTAAACTGGTGGAAAGTCCACACCCCGAGGTACCCAATCTTGTCCATGATGGCTCGTGATGTTATCGGGACTCCAATGTCAAGCATTGCACCCGAGTTGGCATTTAGTACCAGAGGCCGAGTTCTCGACCGCTGTCGAAGTTCATTAAGCCCTGATACTCGTCAAGCTTTAATATGCGCACAAGATTGGCTTCGTATAGAACTTGAAGATCCGAGGCCATTGTCTACCGCTTCGTACATACCGCTCCTGCTCGGAACCAATTAACTGTACAAATAGGTGCCTGGTGTCATGTAAATATCTTACTGAATATCTACCTCACTCCATTGTTTTGTTTTTTTATAATGTTAGGTTGATGGATCTGTTAGTTTATACTATAATGGATTCTGATTGTTTTTGAGGCCATAGCCTTGTCCAAGTGAGCCATGCTGTACATAATGAAATTCTGTTTCTTCTGAATGTCTGTCTATAAATCAGACAATGGGCAAAATTTGTATGTTTTTGCTGGTAATAAGAATTGTAAATATTCAGATCA

Coding sequence (CDS)

ATGGAGATGTCTAACGACTCATCAATCAAGAAACCGAAGAGGTTGACATCGGTAGTTTGGAATCACTTTGAGAGGGTCAGAAAGGCTGACATTTGTTATGCTGTTTGTGTGCATTGTAACAAGAAGCTCAGTGGCTCAAGTAATAGCGGAACCACACATCTAAGAAATCACTTGATGCGATGTCTAAAAAGATCCAATTATGATGTTTCTCAACTACTTGCGGCCAAGAGATTAAAAAAGGACAGTTCAAGTGGTCTTGCAAACATCAGCTTTGATGAAGGGCAGAGAAAAGATGAGTTTAAATCAGCAATTGTGAAATATGATCCAGATCAGAGAAGGGATGAAGTAGTCACCATTGCAAGTAGTAAGTTTGATCAGGAGCGGAGTCAGAATGATCTTGCTCATATGATCATATTGCACGGTTATCCATTGTCTATTGTTGAGCATGTAGGGTTTAAAGTTTTTGTCAAAAACATTCAGCCGTTGTTTGAGGTATTACCCAATAGCACTGTTGAGGTTTCTTGTATGGAAATCTATCAGAAGGAGAAAGAGAAGATTTTTGAAACTATTAATAGATTGCAGGGTAGAATTAACGTTTCGGTTGAAATGTGGTCCTCATCAGAAAATATTGATTATTTATGCTTGGCTGCACATTATATTGACGAGGATTGGAAATTACAGAAGAAGCTTTTGAATTTTGTCACACTTGATTCTTCTCATACAGAGGACATGCTCTCAGACGTGATTATTAAATGCCTGATGGACTGGGACATTGACTGTTCAGCTTTGCGTGGAAGCAGTTTACCTGGGACGAGCAACGACTCTAGGGACAGGCTAAAAGGATTTGACAAGTTCCTTCATGAGACTTCTCAAGGTCAAAGTGTGATGTCTGATTTGGACAAATATTTAGAGGAACCAGTGTTTCCTCGAAACTGCGATTTCAACATATTAAACTGGTGGAAAGTCCACACCCCGAGGTACCCAATCTTGTCCATGATGGCTCGTGATGTTATCGGGACTCCAATGTCAAGCATTGCACCCGAGTTGGCATTTAGTACCAGAGGCCGAGTTCTCGACCGCTGTCGAAGTTCATTAAGCCCTGATACTCGTCAAGCTTTAATATGCGCACAAGATTGGCTTCGTATAGAACTTGAAGATCCGAGGCCATTGTCTACCGCTTCGTACATACCGCTCCTGCTCGGAACCAATTAA

Protein sequence

MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMRCLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIASSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSHTEDMLSDVIIKCLMDWDIDCSALRGSSLPGTSNDSRDRLKGFDKFLHETSQGQSVMSDLDKYLEEPVFPRNCDFNILNWWKVHTPRYPILSMMARDVIGTPMSSIAPELAFSTRGRVLDRCRSSLSPDTRQALICAQDWLRIELEDPRPLSTASYIPLLLGTN

Homology

[Close]

BLAST of Lsi04G019790 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.1e-33
Identity = 88/252 (34.92%), Postives = 136/252 (53.97%), Query Frame = 0


Query: 13  KRLTSVVWNHF--ERVR--KADICYAVCVHCNKKLSGSSNSGTTHLRNH--LMRCLKRSN 72
           +R  S+VW HF  E V       C  +C       SGS  +GT+HL+ H  L  C K  N
Sbjct: 65  RRKKSLVWEHFTIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRHITLGSCPKIKN 124

Query: 73  YDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIASSKFDQ 132
            +   LL             A  + ++G+   E         P +RR      A++ FDQ
Sbjct: 125 QEHKLLLTP-----------AGGTDNDGEGTVE--------RPSKRRYRYTGYANAAFDQ 184

Query: 133 ERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQKEKEKI 192
           ERS + LA MIILH YPL IV+   F  F+ ++QP F V+   T+E     +YQKEKE +
Sbjct: 185 ERSCSYLAKMIILHDYPLHIVQQPAFTTFIDSLQPRFRVVDVETMEWEVYAVYQKEKENL 244

Query: 193 FETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSHTEDMLS 252
            +  N + GRI++++ +W++S+ + Y+ LA  +ID +WK+ +++LNF+ + S H+E+ LS
Sbjct: 245 MQAFNTMPGRISLAIGLWTTSQTLGYVSLAGQFIDSEWKMHRRMLNFMMVSSPHSENALS 297

Query: 253 DVIIKCLMDWDI 259
           + I   L DW++
Sbjct: 305 EAISTSLSDWNM 297

HSP 2 Score: 105.9 bits (263), Expect = 1.1e-21
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 266 SSLPGTSNDSRDRLKGFDKFLHETSQGQSVMSDLDKYLEEPVFPRNCDFNILNWWKVHTP 325
           +S   T+  + D L  FD +L E +  Q   S+L++YL+E + PR  +F+ILNWWK++T 
Sbjct: 585 NSTQATAPSTGDGLVDFDMYLSEIATSQPTKSELEQYLDESLTPRIQEFDILNWWKLNTL 644

Query: 326 RYPILSMMARDVIGTPMSSIAPELAFSTRG---RVLDRCRSSLSPDTRQALICAQDWLRI 385
           +YP LS MARD++  PMS ++   +  + G   R+LD  RSS  P+  +AL+CA+DWL+ 
Sbjct: 645 KYPTLSKMARDILAIPMSMVSSGNSIFSAGTGTRMLDDYRSSSRPEIVEALVCAKDWLQY 704

Query: 386 ELEDPRPLSTA 394
               P   STA
Sbjct: 705 LPATPEAPSTA 715

[Close]

BLAST of Lsi04G019790 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.6e-33
Identity = 84/252 (33.33%), Postives = 135/252 (53.57%), Query Frame = 0


Query: 13  KRLTSVVWNHFE-RVRKADICYAVCVHCNKKLS---GSSNSGTTHLRNH--LMRCLKRSN 72
           +R  SVVW HF        +  A C  C +  +   GS  SGT+HL+ H  L  C    N
Sbjct: 105 RRKKSVVWEHFTIEEMPGGVSRASCNLCKQTFAYSCGSKISGTSHLKRHITLASCPMLKN 164

Query: 73  YDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIASSKFDQ 132
            D+   L    +  +   G A     E   K  ++S                 A++ FDQ
Sbjct: 165 EDMKLSLPLATVTNNDGEGCA-----ERVAKRHYRS--------------TGYANAMFDQ 224

Query: 133 ERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQKEKEKI 192
           +R+ ++LA MIILH YPL IVE  GF  F+ ++QP F V+   T+E     +YQKE+E +
Sbjct: 225 DRTCSNLAKMIILHDYPLHIVEQRGFTAFIGSLQPRFRVIDVDTIEGQVHSVYQKERENL 284

Query: 193 FETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSHTEDMLS 252
               + + GRI+++V +W++S+ + Y+ LAA +ID +W++ ++++NF+ + S H+E+ LS
Sbjct: 285 MHVFSTVPGRISLTVRLWATSQTLGYISLAAQFIDTEWRVHRRMVNFMMVSSPHSENSLS 337

Query: 253 DVIIKCLMDWDI 259
           + I   L DW++
Sbjct: 345 EAISTSLSDWNM 337

HSP 2 Score: 103.2 bits (256), Expect = 7.0e-21
Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 0


Query: 277 DRLKGFDKFLHETSQGQSVMSDLDKYLEEPVFPRNCDFNILNWWKVHTPRYPILSMMARD 336
           D L  FD +L E +  Q  +S+L++YLEE + PR  DF IL WWK++T ++P LS MARD
Sbjct: 626 DELLDFDIYLSEIATSQPSISELEQYLEEALMPRIQDFEILEWWKLNTIKFPTLSKMARD 685

Query: 337 VIGTPMSSIAPE----LAFSTRGRVLDRCRSSLSPDTRQALICAQDWLRIELEDPRPLST 394
           V+  PMS ++       A +T  ++LD  RSSL P+T +AL CA+DWL+         ST
Sbjct: 686 VLAIPMSMVSSGSSIFSATATGSQMLDDYRSSLRPETVEALFCAKDWLQYPPATTEAPST 745

[Close]

BLAST of Lsi04G019790 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.3e-31
Identity = 86/261 (32.95%), Postives = 139/261 (53.26%), Query Frame = 0


Query: 2   EMSNDSSIKKPKRLTSVVWNHF--ERVR--KADICYAVCVHCNKKLSGSSNSGTTHLRNH 61
           EMS   + ++ +R  S+VW HF  E V       C  +C       SGS  +GT+HL+ H
Sbjct: 55  EMSTPPTSRR-RRKKSLVWEHFTIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRH 114

Query: 62  LMRCLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVV 121
           +              L +  + K+    LA          D      V+  P +RR    
Sbjct: 115 I-------------TLGSCPIIKNQEHKLA---LTPAVGTDNDGEGTVE-RPSKRRYRYT 174

Query: 122 TIASSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCME 181
             A++ FDQ+RS + LA MIILH YPL IV+   F  F+ ++QP F V+   T+E     
Sbjct: 175 GYANAAFDQDRSCSYLAKMIILHDYPLHIVQQPAFTTFIDSLQPRFRVVDVETMEGEVYA 234

Query: 182 IYQKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLD 241
           +YQKEKE + +  + + GRI++++ +W++S+ + Y+ LA  +ID +WK+ +++LNF+ + 
Sbjct: 235 VYQKEKENLMQAFSTMPGRISLTIGLWTTSQTLGYVSLAGQFIDSEWKIHRRMLNFMMVS 294

Query: 242 SSHTEDMLSDVIIKCLMDWDI 259
           S H+E+ LS+ I   L DW++
Sbjct: 295 SPHSENALSEAISTSLSDWNM 297

HSP 2 Score: 104.4 bits (259), Expect = 3.1e-21
Identity = 54/138 (39.13%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 265 GSSLPGTSNDSR-------DRLKGFDKFLHETSQGQSVMSDLDKYLEEPVFPRNCDFNIL 324
           G++ P + N ++       D L  FD +L E +  Q   S+L++YL+E + PR  +F+IL
Sbjct: 577 GNNAPASENGTQATAPSTGDGLVDFDMYLSEIATSQPTKSELEQYLDESLTPRIQEFDIL 636

Query: 325 NWWKVHTPRYPILSMMARDVIGTPMSSIAPELAFSTRG---RVLDRCRSSLSPDTRQALI 384
           NWWK++T ++P LS MARD++  PMS ++   +  + G   R+LD  RSSL P+  +AL+
Sbjct: 637 NWWKLNTLKFPTLSRMARDILAIPMSMVSSGNSIFSAGTGTRMLDDYRSSLRPEIVEALV 696

Query: 385 CAQDWLRIELEDPRPLST 393
           CA+DWL+     P   ST
Sbjct: 697 CAKDWLQYLPATPEAPST 714

[Close]

BLAST of Lsi04G019790 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 129.8 bits (325), Expect = 6.9e-29
Identity = 80/256 (31.25%), Postives = 130/256 (50.78%), Query Frame = 0


Query: 7   SSIKKPKRLTSVVWNHFERVRKADIC-YAVCVHCNKKL---SGSSNSGTTHLRNHLMRCL 66
           S+  + ++  S +W HF  V  +D C  A C+HCN+ L   SGS NSGT+HL  H+    
Sbjct: 47  SASTRGQKRKSAIWEHFTLVDVSDGCKRASCIHCNQSLAYSSGSKNSGTSHLTRHIAEWC 106

Query: 67  KRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIASS 126
                         R+ KD        +++                            ++
Sbjct: 107 --------------RVLKDRQKSRRYTTYNSSNE------------------------NA 166

Query: 127 KFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQKE 186
            FDQERS   LA MIIL+ YPL IV+   F  FV ++QP F+++   T+E     IY KE
Sbjct: 167 SFDQERSCLRLAKMIILNDYPLHIVQQPAFLSFVDSVQPNFKMVDIGTIETEVYAIYLKE 226

Query: 187 KEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSHTE 246
           K+ + + +  + GRI+++V   +++++I Y+ LAA +ID +W+L +++L  +      +E
Sbjct: 227 KDHLQQALANIPGRISLTVGSLTTNQSIRYISLAAQFIDSEWRLHRRVLKVMMAPWPQSE 264

Query: 247 DMLSDVIIKCLMDWDI 259
           + +S  IIKCL DW++
Sbjct: 287 NAVSRAIIKCLSDWNM 264

HSP 2 Score: 90.1 bits (222), Expect = 6.1e-17
Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 279 LKGFDKFLHE-TSQGQSVMSDLDKYLEEPVFPRNCDFNILNWWKVHTPRYPILSMMARDV 338
           L  FD +L E T+ GQ    +L+ YLEE +  R  DF++L WW+ +T +YP LS MARDV
Sbjct: 575 LVDFDMYLSEVTTMGQPFKHELELYLEEALTQRTPDFDVLKWWQDNTLKYPTLSRMARDV 634

Query: 339 IGTPMSSIAPELAF---STRGRVLDRCRSSLSPDTRQALICAQDWLR 382
           +  PMS++    +        R LD  RSSL P+  +AL+CA+DWL+
Sbjct: 635 LAIPMSTVGVGSSVFLPDNGSRSLDDYRSSLRPELVEALLCAKDWLQ 681

[Close]

BLAST of Lsi04G019790 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 6.5e-27
Identity = 76/272 (27.94%), Postives = 136/272 (50.00%), Query Frame = 0


Query: 1   MEMSNDSSIKKP-------KRLTSVVWNHFERVRKADIC-YAVCVHCNKKL---SGSSNS 60
           +E+ ND+ +  P       ++  S+VW HF        C  A C  CN+     +G+  +
Sbjct: 45  LEVYNDTEMVSPETQPIKRRKKKSMVWEHFTIEAVEPNCRRAFCKGCNQSFAYSNGNKVA 104

Query: 61  GTTHLRNHLMRCLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDP 120
           GT+HL+ H+ +             A      + ++ L +  +              K D 
Sbjct: 105 GTSHLKRHIFK---------GTCPALIHTHDNDNNPLMSTPYTP------------KTDT 164

Query: 121 DQRRDEVVTIASS--KFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLP 180
            +RR      AS    F+Q++ + ++A MII+H YPL +V+H GF  FV++IQP F+ + 
Sbjct: 165 PRRRYRSQNNASPYVAFNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHFDAVS 224

Query: 181 NSTVEVSCMEIYQKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQ 240
            + V+  C+  Y  EK+ + +++  + GR  ++++ W+S   + Y+ + AHYID DWK+Q
Sbjct: 225 FNNVQGDCVATYLAEKQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQ 284

Query: 241 KKLLNFVTLDSSHTEDMLSDVIIKCLMDWDID 260
           KKLLN +       ++ LS  +  C+ +W ++
Sbjct: 285 KKLLNVLMESYPEADEALSLAVANCVSEWGLE 295

HSP 2 Score: 102.4 bits (254), Expect = 1.2e-20
Identity = 46/104 (44.23%), Postives = 73/104 (70.19%), Query Frame = 0


Query: 277 DRLKGFDKFLHETSQGQSVMSDLDKYLEEPVFPRNCDFNILNWWKVHTPRYPILSMMARD 336
           D L  FD ++ ET+ GQ++ S+LD+YL+E + PR  +F++L+WWK +  +YP LS MARD
Sbjct: 572 DGLSDFDTYIMETT-GQNLKSELDQYLDETLLPRVQEFDVLDWWKQNKLKYPTLSKMARD 631

Query: 337 VIGTPMSSIAPELAFSTRGRVLDRCRSSLSPDTRQALICAQDWL 381
           ++  P+S+ A +  F    R +D  ++SL P+T +ALICA++WL
Sbjct: 632 ILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREWL 674

[Close]

BLAST of Lsi04G019790 vs. ExPASy TrEMBL
Match: A0A1S4E4C0 (zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucumis melo OX=3656 GN=LOC107992032 PE=4 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 8.4e-187
Identity = 383/671 (57.08%), Postives = 388/671 (57.82%), Query Frame = 0


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120
           CLKRSNYDVSQLLAAKRLKKDSSSGLANI FDEGQRKDEFKSAIVKYDP+QRRDEVVTIA
Sbjct: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANIGFDEGQRKDEFKSAIVKYDPNQRRDEVVTIA 120

Query: 121 SSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQ 180
           SSKFDQERSQNDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFEVLPNSTVE+SCMEIYQ
Sbjct: 121 SSKFDQERSQNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEVLPNSTVELSCMEIYQ 180

Query: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSH 240
           KEKEKIFETINRL GRINVSVEMWSSSENIDYLCL AHYIDEDWKLQKKLLNF+TLDSSH
Sbjct: 181 KEKEKIFETINRLPGRINVSVEMWSSSENIDYLCLTAHYIDEDWKLQKKLLNFITLDSSH 240

Query: 241 TEDMLSDVIIKCLMDWDIDC---------------------------------------- 300
           TEDMLSDVIIKCL+DW IDC                                        
Sbjct: 241 TEDMLSDVIIKCLVDWGIDCKLFALTFDDFSTNYEIIRRIKEHILKKRSLLSNGSLFDVC 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SAAHTINAIAKDVIEAMREVNQKIRGSFKYIRSSQVTQRRFNEMAHQVGITSQKILVPDN 360

Query: 361 --------------------------------SAL------------------------- 404
                                           SAL                         
Sbjct: 361 LGQWNSTYFMLETAVEYKGAFNLLQKHDSHYASALTALEWEWTTGVAEYLKLFVEIVNIF 420

[Close]

BLAST of Lsi04G019790 vs. ExPASy TrEMBL
Match: A0A6J1FC74 (zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442712 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 5.5e-186
Identity = 372/673 (55.27%), Postives = 391/673 (58.10%), Query Frame = 0


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           ME+SNDSSIKKPKRLTSVVWNHFERVRKADICYAVC+HCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEISNDSSIKKPKRLTSVVWNHFERVRKADICYAVCLHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120
           CLKRSNYDVSQLLAAKR+KKDSS GLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA
Sbjct: 61  CLKRSNYDVSQLLAAKRMKKDSSGGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120

Query: 121 SSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQ 180
           SSKFDQERS+NDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFEVLPNST+E++CMEIY+
Sbjct: 121 SSKFDQERSRNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEVLPNSTIELACMEIYE 180

Query: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSH 240
           KEKEKIFETINRLQGRINVSVEMWSS EN+DYLCL AHYI+EDWKLQKKLLNF+TLDSSH
Sbjct: 181 KEKEKIFETINRLQGRINVSVEMWSSPENMDYLCLTAHYINEDWKLQKKLLNFITLDSSH 240

Query: 241 TEDMLSDVIIKCLMDWDIDC---------------------------------------- 300
           T+DMLSDVIIKCLMDWDIDC                                        
Sbjct: 241 TDDMLSDVIIKCLMDWDIDCKLFALTFDNFSTNDEIIRRINEHISKKRPLLSNGRLFDVC 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SAAHTMNAIAEDVIEVLREITQKIRASFKYIRSSQVIQGRFNEMAHQVGITSQKILVPDS 360

Query: 361 ------------------------------------------------------------ 404
                                                                       
Sbjct: 361 PGQWNSTYFMLETAIEYKAAFNLLHEHDPDYASPLTVLEWEWTTNVAGYLKLFVEIMNIF 420

[Close]

BLAST of Lsi04G019790 vs. ExPASy TrEMBL
Match: A0A5A7VEC8 (Zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00500 PE=4 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 1.2e-185
Identity = 381/669 (56.95%), Postives = 386/669 (57.70%), Query Frame = 0


Query: 3   MSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMRCL 62
           MSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMRCL
Sbjct: 1   MSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMRCL 60

Query: 63  KRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIASS 122
           KRSNYDVSQLLAAKRLKKDSSSGLANI FDEGQRKDEFKSAIVKYDP+QRRDEVVTIASS
Sbjct: 61  KRSNYDVSQLLAAKRLKKDSSSGLANIGFDEGQRKDEFKSAIVKYDPNQRRDEVVTIASS 120

Query: 123 KFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQKE 182
           KFDQERSQNDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFEVLPNSTVE+SCMEIYQKE
Sbjct: 121 KFDQERSQNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEVLPNSTVELSCMEIYQKE 180

Query: 183 KEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSHTE 242
           KEKIFETINRL GRINVSVEMWSSSENIDYLCL AHYIDEDWKLQKKLLNF+TLDSSHTE
Sbjct: 181 KEKIFETINRLPGRINVSVEMWSSSENIDYLCLTAHYIDEDWKLQKKLLNFITLDSSHTE 240

Query: 243 DMLSDVIIKCLMDWDIDC------------------------------------------ 302
           DMLSDVIIKCL+DW IDC                                          
Sbjct: 241 DMLSDVIIKCLVDWGIDCKLFALTFDDFSTNYEIIRRIKEHILKKRSLLSNGSLFDVCSA 300

Query: 303 ------------------------------------------------------------ 362
                                                                       
Sbjct: 301 AHTINAIAKDVIEAMREVNQKIRGSFKYIRSSQVTQRRFNEMAHQVGITSQKILVPDNLG 360

Query: 363 ------------------------------SAL--------------------------- 404
                                         SAL                           
Sbjct: 361 QWNSTYFMLETAVEYKGAFNLLQKHDSHYASALTALEWEWTTGVAEYLKLFVEIVNIFSS 420

[Close]

BLAST of Lsi04G019790 vs. ExPASy TrEMBL
Match: A0A6J1IN11 (zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477023 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 2.1e-185
Identity = 371/673 (55.13%), Postives = 390/673 (57.95%), Query Frame = 0


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           ME+SNDSSIKKPKRLTSVVWNHFERVRKADICYAVC+HCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEISNDSSIKKPKRLTSVVWNHFERVRKADICYAVCLHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120
           CLKRSNYDVSQLLAAKR+KKDSS GLANISFDEGQRKDEFKSA+VKYDPDQRRDEVVTIA
Sbjct: 61  CLKRSNYDVSQLLAAKRMKKDSSGGLANISFDEGQRKDEFKSAVVKYDPDQRRDEVVTIA 120

Query: 121 SSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQ 180
           SSKFDQERS+NDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFEVLPNST+E++CM+IY+
Sbjct: 121 SSKFDQERSRNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEVLPNSTIELACMKIYE 180

Query: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSH 240
           KEKEKIFETINRLQGRINVSVEMWSS EN+DYLCL AHYIDEDWKLQKKLLNF+TLDSSH
Sbjct: 181 KEKEKIFETINRLQGRINVSVEMWSSPENMDYLCLTAHYIDEDWKLQKKLLNFITLDSSH 240

Query: 241 TEDMLSDVIIKCLMDWDIDC---------------------------------------- 300
           T+DMLSDVIIKCLMDWDIDC                                        
Sbjct: 241 TDDMLSDVIIKCLMDWDIDCKLFALTFDDFSTNDEIIRRINEHISKKRPLLSNGRLFDLC 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SAAHTMNAIAEDVIEALREITQKIRASFKYIRSSQVIQGRFNEMAHQVGITSQKILVPDS 360

Query: 361 ------------------------------------------------------------ 404
                                                                       
Sbjct: 361 PGQWNSTYFMLETAIEYKAAFNLLHEHDPDYASPLTVLEWEWTTSVAGYLKLFVEIMNIF 420

[Close]

BLAST of Lsi04G019790 vs. ExPASy TrEMBL
Match: A0A0A0L1Z7 (BED-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G624400 PE=4 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 3.0e-184
Identity = 376/673 (55.87%), Postives = 383/673 (56.91%), Query Frame = 0


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           MEMSNDSS+KKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 199 MEMSNDSSVKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 258

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120
           CLKRSNYDVSQLLAAKRLKKDSSSGLANI FDEGQRKDEFKSAIVKYDP+QRRDEVVTIA
Sbjct: 259 CLKRSNYDVSQLLAAKRLKKDSSSGLANIGFDEGQRKDEFKSAIVKYDPNQRRDEVVTIA 318

Query: 121 SSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQ 180
           SSKFDQERSQNDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFEVLPNSTVE+SCMEIYQ
Sbjct: 319 SSKFDQERSQNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEVLPNSTVEISCMEIYQ 378

Query: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSH 240
           KEK KIFE INRL GRINVSVEMWSSSENIDYLCL AHYIDEDWKLQKKLLNF+TLDSSH
Sbjct: 379 KEKLKIFEIINRLPGRINVSVEMWSSSENIDYLCLTAHYIDEDWKLQKKLLNFITLDSSH 438

Query: 241 TEDMLSDVIIKCLMDWDIDC---------------------------------------- 300
           TEDMLSDVIIKCL+DW IDC                                        
Sbjct: 439 TEDMLSDVIIKCLVDWGIDCKLFALTFDDFSTNYEIIRRIEEHISKQRSLLSNVRLFDVC 498

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 499 SAAHTINAIAKDVIEAMREVNQKIRGSFKYIRSSQVTQARFNEMAHQVGITSQKILVPDN 558

Query: 361 ------------------------------------------------------------ 404
                                                                       
Sbjct: 559 PGQWNLTYFMLETAVEYKGAFSLLQKHDSHYASALTALEWEWTTSVADYLKLFVEIVNIF 618

[Close]

BLAST of Lsi04G019790 vs. NCBI nr
Match: XP_038898440.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida] >XP_038898441.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida])

HSP 1 Score: 672.5 bits (1734), Expect = 2.2e-189
Identity = 384/673 (57.06%), Postives = 393/673 (58.40%), Query Frame = 0


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           MEMSNDS+IKKPKRLTS+VWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEMSNDSTIKKPKRLTSIVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120
           CLKRSNYDVSQLLAAKRLKKDSSSGLANI FDEGQRKDEFKSAIVKYDP+QRRDE VTIA
Sbjct: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANIGFDEGQRKDEFKSAIVKYDPNQRRDEAVTIA 120

Query: 121 SSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQ 180
           SSKFDQERSQNDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFE+LPNSTVE+SCMEIYQ
Sbjct: 121 SSKFDQERSQNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEILPNSTVELSCMEIYQ 180

Query: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSH 240
           KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCL AHYIDEDWKLQKKLLNFVTLDSSH
Sbjct: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLTAHYIDEDWKLQKKLLNFVTLDSSH 240

Query: 241 TEDMLSDVIIKCLMDWDIDC---------------------------------------- 300
           TEDMLSDVIIKCLMDWDIDC                                        
Sbjct: 241 TEDMLSDVIIKCLMDWDIDCKLFALTFDDFSTNDEIIRRIKEHVSKKKSLLSNGRLFDVC 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SAAHTMNAIAEDVIEAMREVNQKIRGSFKYIRSSQITQRRFNEMAHQVGITSQKILVPDS 360

Query: 361 ------------------------------------------------------------ 404
                                                                       
Sbjct: 361 PGQWNSTYFMLETAVEYKGAFNLLQKEDPHYASALTALEWEWTTSVADYLKLFVEIVNIF 420

[Close]

BLAST of Lsi04G019790 vs. NCBI nr
Match: XP_016903076.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis melo] >XP_016903077.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis melo] >XP_016903078.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis melo] >XP_016903079.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis melo])

HSP 1 Score: 662.9 bits (1709), Expect = 1.7e-186
Identity = 383/671 (57.08%), Postives = 388/671 (57.82%), Query Frame = 0


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120
           CLKRSNYDVSQLLAAKRLKKDSSSGLANI FDEGQRKDEFKSAIVKYDP+QRRDEVVTIA
Sbjct: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANIGFDEGQRKDEFKSAIVKYDPNQRRDEVVTIA 120

Query: 121 SSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQ 180
           SSKFDQERSQNDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFEVLPNSTVE+SCMEIYQ
Sbjct: 121 SSKFDQERSQNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEVLPNSTVELSCMEIYQ 180

Query: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSH 240
           KEKEKIFETINRL GRINVSVEMWSSSENIDYLCL AHYIDEDWKLQKKLLNF+TLDSSH
Sbjct: 181 KEKEKIFETINRLPGRINVSVEMWSSSENIDYLCLTAHYIDEDWKLQKKLLNFITLDSSH 240

Query: 241 TEDMLSDVIIKCLMDWDIDC---------------------------------------- 300
           TEDMLSDVIIKCL+DW IDC                                        
Sbjct: 241 TEDMLSDVIIKCLVDWGIDCKLFALTFDDFSTNYEIIRRIKEHILKKRSLLSNGSLFDVC 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SAAHTINAIAKDVIEAMREVNQKIRGSFKYIRSSQVTQRRFNEMAHQVGITSQKILVPDN 360

Query: 361 --------------------------------SAL------------------------- 404
                                           SAL                         
Sbjct: 361 LGQWNSTYFMLETAVEYKGAFNLLQKHDSHYASALTALEWEWTTGVAEYLKLFVEIVNIF 420

[Close]

BLAST of Lsi04G019790 vs. NCBI nr
Match: KAG6591773.1 (Zinc finger BED domain-containing protein RICESLEEPER 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 660.2 bits (1702), Expect = 1.1e-185
Identity = 372/673 (55.27%), Postives = 390/673 (57.95%), Query Frame = 0


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           ME+SNDSSIKKPKRLTSVVWNHFERVRKADICYAVC+HCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEISNDSSIKKPKRLTSVVWNHFERVRKADICYAVCLHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120
           CLKRSNYDVSQLLAAKR+KKDSS GLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA
Sbjct: 61  CLKRSNYDVSQLLAAKRMKKDSSGGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120

Query: 121 SSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQ 180
           SSKFDQERS+NDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFEVLPN T+E++CMEIY+
Sbjct: 121 SSKFDQERSRNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEVLPNRTIELACMEIYE 180

Query: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSH 240
           KEKEKIFETINRLQGRINVSVEMWSS EN+DYLCL AHYIDEDWKLQKKLLNF+TLDSSH
Sbjct: 181 KEKEKIFETINRLQGRINVSVEMWSSPENMDYLCLTAHYIDEDWKLQKKLLNFITLDSSH 240

Query: 241 TEDMLSDVIIKCLMDWDIDC---------------------------------------- 300
           T+DMLSDVIIKCLMDWDIDC                                        
Sbjct: 241 TDDMLSDVIIKCLMDWDIDCKLFSLTFDDFSTNDEIIRRINEHISKKRPLLSNGRLFDVC 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SAAHTMNAIAEDVIEALREITQKIRASFKYIRSSQVIQGRFNEMAHQVGITSQKILVPDS 360

Query: 361 ------------------------------------------------------------ 404
                                                                       
Sbjct: 361 PGQWNSTYFMLETAIEYKAAFNLLHEHDPDYASPLTVLEWEWTTNVAGYLKLFVEIMNIF 420

[Close]

BLAST of Lsi04G019790 vs. NCBI nr
Match: XP_022935970.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita moschata])

HSP 1 Score: 660.2 bits (1702), Expect = 1.1e-185
Identity = 372/673 (55.27%), Postives = 391/673 (58.10%), Query Frame = 0


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           ME+SNDSSIKKPKRLTSVVWNHFERVRKADICYAVC+HCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEISNDSSIKKPKRLTSVVWNHFERVRKADICYAVCLHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120
           CLKRSNYDVSQLLAAKR+KKDSS GLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA
Sbjct: 61  CLKRSNYDVSQLLAAKRMKKDSSGGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120

Query: 121 SSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQ 180
           SSKFDQERS+NDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFEVLPNST+E++CMEIY+
Sbjct: 121 SSKFDQERSRNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEVLPNSTIELACMEIYE 180

Query: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSH 240
           KEKEKIFETINRLQGRINVSVEMWSS EN+DYLCL AHYI+EDWKLQKKLLNF+TLDSSH
Sbjct: 181 KEKEKIFETINRLQGRINVSVEMWSSPENMDYLCLTAHYINEDWKLQKKLLNFITLDSSH 240

Query: 241 TEDMLSDVIIKCLMDWDIDC---------------------------------------- 300
           T+DMLSDVIIKCLMDWDIDC                                        
Sbjct: 241 TDDMLSDVIIKCLMDWDIDCKLFALTFDNFSTNDEIIRRINEHISKKRPLLSNGRLFDVC 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SAAHTMNAIAEDVIEVLREITQKIRASFKYIRSSQVIQGRFNEMAHQVGITSQKILVPDS 360

Query: 361 ------------------------------------------------------------ 404
                                                                       
Sbjct: 361 PGQWNSTYFMLETAIEYKAAFNLLHEHDPDYASPLTVLEWEWTTNVAGYLKLFVEIMNIF 420

[Close]

BLAST of Lsi04G019790 vs. NCBI nr
Match: XP_023536471.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita pepo subsp. pepo] >XP_023536472.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 659.8 bits (1701), Expect = 1.5e-185
Identity = 372/673 (55.27%), Postives = 390/673 (57.95%), Query Frame = 0


Query: 1   MEMSNDSSIKKPKRLTSVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMR 60
           ME+SNDSSIKKPKRLTSVVWNHFERVRKADICYAVC+HCNKKLSGSSNSGTTHLRNHLMR
Sbjct: 1   MEISNDSSIKKPKRLTSVVWNHFERVRKADICYAVCLHCNKKLSGSSNSGTTHLRNHLMR 60

Query: 61  CLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120
           CLKRSNYDVSQLLAAKR+KKDSS GLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA
Sbjct: 61  CLKRSNYDVSQLLAAKRMKKDSSGGLANISFDEGQRKDEFKSAIVKYDPDQRRDEVVTIA 120

Query: 121 SSKFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQ 180
           SSKFDQERS+NDLA MIILHGYPLSIVEHVGFKVFVKN+QPLFEVLPNST+E++CMEIY+
Sbjct: 121 SSKFDQERSRNDLARMIILHGYPLSIVEHVGFKVFVKNVQPLFEVLPNSTIELACMEIYE 180

Query: 181 KEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSH 240
           KEKEKIFETINRLQGRINVSVEMWSS EN+DYLCL AHYIDEDWKLQKKLLNF+TLDSSH
Sbjct: 181 KEKEKIFETINRLQGRINVSVEMWSSPENMDYLCLTAHYIDEDWKLQKKLLNFITLDSSH 240

Query: 241 TEDMLSDVIIKCLMDWDIDC---------------------------------------- 300
           T+DMLSDVIIKCLMDWDIDC                                        
Sbjct: 241 TDDMLSDVIIKCLMDWDIDCKLFALTFDDFSTNDEIIRRINEHISKKRPLLSNGRLFDVC 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 SAAHTMNAIAEDVIEALRETTQKIRASFKYIRSSQVIQGRFNEMAHQVGITSQKILVPDS 360

Query: 361 ------------------------------------------------------------ 404
                                                                       
Sbjct: 361 PGQWNSTYFMLETAIEYKAAFNLLHEHDPDYASPLTVLEWEWTTSVAGYLKLFVEIMNIF 420

[Close]

BLAST of Lsi04G019790 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 123.2 bits (308), Expect = 4.6e-28
Identity = 76/272 (27.94%), Postives = 136/272 (50.00%), Query Frame = 0


Query: 1   MEMSNDSSIKKP-------KRLTSVVWNHFERVRKADIC-YAVCVHCNKKL---SGSSNS 60
           +E+ ND+ +  P       ++  S+VW HF        C  A C  CN+     +G+  +
Sbjct: 45  LEVYNDTEMVSPETQPIKRRKKKSMVWEHFTIEAVEPNCRRAFCKGCNQSFAYSNGNKVA 104

Query: 61  GTTHLRNHLMRCLKRSNYDVSQLLAAKRLKKDSSSGLANISFDEGQRKDEFKSAIVKYDP 120
           GT+HL+ H+ +             A      + ++ L +  +              K D 
Sbjct: 105 GTSHLKRHIFK---------GTCPALIHTHDNDNNPLMSTPYTP------------KTDT 164

Query: 121 DQRRDEVVTIASS--KFDQERSQNDLAHMIILHGYPLSIVEHVGFKVFVKNIQPLFEVLP 180
            +RR      AS    F+Q++ + ++A MII+H YPL +V+H GF  FV++IQP F+ + 
Sbjct: 165 PRRRYRSQNNASPYVAFNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHFDAVS 224

Query: 181 NSTVEVSCMEIYQKEKEKIFETINRLQGRINVSVEMWSSSENIDYLCLAAHYIDEDWKLQ 240
            + V+  C+  Y  EK+ + +++  + GR  ++++ W+S   + Y+ + AHYID DWK+Q
Sbjct: 225 FNNVQGDCVATYLAEKQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQ 284

Query: 241 KKLLNFVTLDSSHTEDMLSDVIIKCLMDWDID 260
           KKLLN +       ++ LS  +  C+ +W ++
Sbjct: 285 KKLLNVLMESYPEADEALSLAVANCVSEWGLE 295

HSP 2 Score: 102.4 bits (254), Expect = 8.4e-22
Identity = 46/104 (44.23%), Postives = 73/104 (70.19%), Query Frame = 0


Query: 277 DRLKGFDKFLHETSQGQSVMSDLDKYLEEPVFPRNCDFNILNWWKVHTPRYPILSMMARD 336
           D L  FD ++ ET+ GQ++ S+LD+YL+E + PR  +F++L+WWK +  +YP LS MARD
Sbjct: 572 DGLSDFDTYIMETT-GQNLKSELDQYLDETLLPRVQEFDVLDWWKQNKLKYPTLSKMARD 631

Query: 337 VIGTPMSSIAPELAFSTRGRVLDRCRSSLSPDTRQALICAQDWL 381
           ++  P+S+ A +  F    R +D  ++SL P+T +ALICA++WL
Sbjct: 632 ILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREWL 674

[Close]

BLAST of Lsi04G019790 vs. TAIR 10
Match: AT1G18560.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 76.6 bits (187), Expect = 5.0e-14
Identity = 37/110 (33.64%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 290 SQGQSVMSDLDKYLEEPVFPRNCDFNILNWWKVHTPRYPILSMMARDVIGTPMSSIAPEL 349
           S   +V+ +L +YL E + P   D  +L+WWKV++ RYP LS MARD +    +S APE 
Sbjct: 561 SMSNNVVDELTQYLSESIVPMQTD--VLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEE 620

Query: 350 AFSTRGRVLDRCRSSLSPDTRQALICAQDWLRIELEDPRPLSTASYIPLL 400
            F  +G  +D+ +  +  D+ Q++IC + W+   ++     S   Y  L+
Sbjct: 621 IFCGKGEEIDKQKYCMPHDSTQSVICIRSWIEAGMKLKYKCSEIDYERLM 668

HSP 2 Score: 50.4 bits (119), Expect = 3.8e-06
Identity = 26/123 (21.14%), Postives = 58/123 (47.15%), Query Frame = 0


Query: 137 IILHGYPLSIVEHVGFKVFVKNIQPLFEVLPNSTVEVSCMEIYQKEKEKIFETINRLQGR 196
           + L   P S V+        K ++P  ++ P    +    E++   +  +  T+  +Q +
Sbjct: 145 LALSSLPPSTVDETWLGNSFKFLKPSIQLWPAEKYKAILDEVFTSMRGDVKTTLEHIQSK 204

Query: 197 INVSVEMWSSSENIDYLCLAAHYIDEDWKLQKKLLNFVTLDSSHTEDMLSDVIIKCLMDW 256
           ++V++  W+S ENI Y+ +   +IDE+W   + LL+   +        + + ++K L  +
Sbjct: 205 VSVTLSFWNSYENIFYMSVTGQWIDENWSSHRLLLDICRIPYPSGGSEIYNSLLKVLKTY 264

Query: 257 DID 260
            I+
Sbjct: 265 AIE 267

The following BLAST results are available for this feature:

BLAST of Lsi04G019790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9FJG3	2.1e-33	34.92	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q75HY5	3.6e-33	33.33	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
Q6AVI0	4.3e-31	32.95	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
Q0JMB2	6.9e-29	31.25	Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j...	[more]
Q9M2N5	6.5e-27	27.94	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]

BLAST of Lsi04G019790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E4C0	8.4e-187	57.08	zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucumis melo OX=...	[more]
A0A6J1FC74	5.5e-186	55.27	zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucurbita moscha...	[more]
A0A5A7VEC8	1.2e-185	56.95	Zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucumis melo var...	[more]
A0A6J1IN11	2.1e-185	55.13	zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucurbita maxima...	[more]
A0A0A0L1Z7	3.0e-184	55.87	BED-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G624400 PE...	[more]

BLAST of Lsi04G019790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898440.1	2.2e-189	57.06	zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]...	[more]
XP_016903076.1	1.7e-186	57.08	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis...	[more]
KAG6591773.1	1.1e-185	55.27	Zinc finger BED domain-containing protein RICESLEEPER 1, partial [Cucurbita argy...	[more]
XP_022935970.1	1.1e-185	55.27	zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita moschata...	[more]
XP_023536471.1	1.5e-185	55.27	zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita pepo sub...	[more]

BLAST of Lsi04G019790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	4.6e-28	27.94	BED zinc finger ;hAT family dimerisation domain	[more]
AT1G18560.1	5.0e-14	33.64	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 176..196
None	No IPR available	SMART	SM00614	bed5	coord: 14..64 e-value: 1.2E-16 score: 71.3
None	No IPR available	PANTHER	PTHR23272:SF147	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE	coord: 2..260
None	No IPR available	PANTHER	PTHR23272:SF147	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE	coord: 266..390
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 2..260 coord: 266..390
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 298..380 e-value: 1.0E-28 score: 98.9
IPR003656	Zinc finger, BED-type	PFAM	PF02892	zf-BED	coord: 17..60 e-value: 4.4E-7 score: 29.8
IPR003656	Zinc finger, BED-type	PROSITE	PS50808	ZF_BED	coord: 14..69 score: 11.144231
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 279..382
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 184..260
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 17..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G019790.1	Lsi04G019790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009791	post-embryonic development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046983	protein dimerization activity