Homology
BLAST of Lsi04G019400 vs. ExPASy Swiss-Prot
Match:
Q9LIE7 (Pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E95 PE=2 SV=1)
HSP 1 Score: 998.4 bits (2580), Expect = 4.6e-290
Identity = 496/808 (61.39%), Postives = 631/808 (78.09%), Query Frame = 0
Query: 1 MASSATPLPLFPP-----PSHLPLHNRST------NPKIPTIRYRLSRLCQEGHLHLARQ 60
MA SA PLP PP PS + ST P+ P+IR RLS++CQ+G+ LARQ
Sbjct: 1 MAGSALPLPPPPPLSLQSPSQNQTRHSSTFSPPTLTPQTPSIRSRLSKICQDGNPQLARQ 60
Query: 61 LFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADT 120
LFDA+P+P+TVLWNTIIIG +CNN P EALLFY MK ++P CD+YTYSS LKACA+T
Sbjct: 61 LFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAET 120
Query: 121 RNLGVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDS 180
+NL GKAVH H +RCL N SR+V+NSL+NMY CL+ PD D+VRKVFD+
Sbjct: 121 KNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN-APD------CFEYDVVRKVFDN 180
Query: 181 MRKRTVIAWNTLIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNA 240
MR++ V+AWNTLI+WYV+T R AEA +QF +MM++ +KPSPVSFVNVFPA S K A
Sbjct: 181 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 240
Query: 241 NVVHGMLVKLGSEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFV 300
NV +G+++KLG EYV DL+VVSS+I MYAELG +E +++VFD+C+ERN EVWNTMI +V
Sbjct: 241 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV 300
Query: 301 QNNFPLEGIQLFLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQV 360
QN+ +E I+LFL+A+ S++ DEV+ L A +A S LQ+ EL Q H FV KN +
Sbjct: 301 QNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPI 360
Query: 361 CVINALIAMYSRCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQ 420
++N+L+ MYSRC S+ SF +F +M E+DVVSWNTMISAFVQNGL+DE LML YEMQKQ
Sbjct: 361 VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 420
Query: 421 DLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQ 480
+D +TVTALLSAAS+LRN +IGKQTH +L+R GIQFEGM+SYLIDMY+KSGLI +Q
Sbjct: 421 GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQ 480
Query: 481 NVFEKSYSRERDQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNP 540
+FE S ERDQATWNSM+SGYTQNG ++ FLV R+ML+Q + PN VT+ASILPAC+
Sbjct: 481 KLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQ 540
Query: 541 SGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTM 600
G +D GKQLHGFSIR LDQNVFVA+AL+DMYSK+G+I +AE +FS+ ER+ VTY+TM
Sbjct: 541 IGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTM 600
Query: 601 ILGYGQHGMGESALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYN 660
ILGYGQHGMGE A+S+F +MQ+SGI+PDA+TFVAVLSACSY+GL+DEGL+IFE MR VYN
Sbjct: 601 ILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYN 660
Query: 661 IQPSTEHFCCVADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVV 720
IQPS+EH+CC+ DMLGRVGRV+EAYEFV GLGE+GN+ E+WGSLL +C++H + EL + V
Sbjct: 661 IQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETV 720
Query: 721 AKKLLEMEKRNGKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYM 780
+++L + +K +GY VLLSN+YAEE+ W++V VR+ M+EKGLKKE G S IEIAGY+
Sbjct: 721 SERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYV 780
Query: 781 NHFASKDRKHPQSDEIYSMLEELLMDMK 798
N F S+D++HP S EIY +++ L DM+
Sbjct: 781 NCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
BLAST of Lsi04G019400 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 432.2 bits (1110), Expect = 1.3e-119
Identity = 261/826 (31.60%), Postives = 460/826 (55.69%), Query Frame = 0
Query: 10 LFPPPSHLPLHNRSTNPKIPTIRYRLSRLCQEGHLHLARQLFDALPRPSTVLWNTIIIGL 69
+FP PS L +R +P + + + A +F + R S W ++
Sbjct: 14 IFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSR-SPEWWIDLLRSK 73
Query: 70 VCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGVGKAVHAHFLRCLMNP 129
V +N EA+L Y +M +K D+Y + ++LKA AD +++ +GK +HAH +
Sbjct: 74 VRSNLLREAVLTYVDMIVLG--IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGV 133
Query: 130 SRI-VYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRTVIAWNTLIAWYVRT 189
+ V N+L+N+Y C G G V KVFD + +R ++WN+LI+
Sbjct: 134 DSVTVANTLVNLYRKC-----------GDFG--AVYKVFDRISERNQVSWNSLISSLCSF 193
Query: 190 ERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSL---GDFKNANVVHGMLVKLGSEYVN 249
E++ A++ FR M+ ++PS + V+V A S+L VH ++ G
Sbjct: 194 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE---L 253
Query: 250 DLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNFPLEGIQLFLQAM 309
+ +++++ + MY +LG L +K + + R+ WNT++++ QN LE ++ +L+ M
Sbjct: 254 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE-YLREM 313
Query: 310 ESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVI-NALIAMYSRCNS 369
E DE ++ S + A SHL+ ++LHA+ +KN ++ + + +AL+ MY C
Sbjct: 314 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 373
Query: 370 IDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQ-DLMVDSVTVTALLS 429
+ ++FD M ++ + WN MI+ + QN + EAL+LF M++ L+ +S T+ ++
Sbjct: 374 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 433
Query: 430 AASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSYSRERDQ 489
A + HG++++ G+ + + + L+DMY++ G I+ A +F K +RD
Sbjct: 434 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK--MEDRDL 493
Query: 490 ATWNSMMSGYTQNGLVDQAFLVLRQM--LDQKV---------MPNVVTLASILPACNPSG 549
TWN+M++GY + + A L+L +M L++KV PN +TL +ILP+C
Sbjct: 494 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 553
Query: 550 YIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMIL 609
+ GK++H ++I+N+L +V V +AL+DMY+K G + + VF + +++++T++ +I+
Sbjct: 554 ALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 613
Query: 610 GYGQHGMGESALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQ 669
YG HG G+ A+ + M G++P+ VTF++V +ACS++G+VDEGL+IF M+ Y ++
Sbjct: 614 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 673
Query: 670 PSTEHFCCVADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAK 729
PS++H+ CV D+LGR GR+ EAY+ + + N W SLL A RIH E+G++ A+
Sbjct: 674 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQ 733
Query: 730 KLLEMEKRNGKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNH 789
L+++E ++VLL+NIY+ W+ VR+ MKE+G++KE G SWIE ++
Sbjct: 734 NLIQLEP--NVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHK 793
Query: 790 FASKDRKHPQSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
F + D HPQS+++ LE L M+ GY P ++ L + E ++
Sbjct: 794 FVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEK 815
BLAST of Lsi04G019400 vs. ExPASy Swiss-Prot
Match:
Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 418.3 bits (1074), Expect = 2.0e-115
Identity = 245/762 (32.15%), Postives = 420/762 (55.12%), Query Frame = 0
Query: 42 GHLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSS 101
G L A ++FD +P + WNT+I V N P AL Y NM+ + S + +
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS--FPA 189
Query: 102 VLKACADTRNLGVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRD 161
+LKACA R++ G +H+ ++ + + + N+L++MY+ ++
Sbjct: 190 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLS------------- 249
Query: 162 LVRKVFDSMR-KRTVIAWNTLIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAF 221
R++FD + K + WN++++ Y + + E ++ FR M G P+ + V+ A
Sbjct: 250 AARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 309
Query: 222 SSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEV 281
K +H ++K S + ++LYV ++ I MY G + A+++ +
Sbjct: 310 DGFSYAKLGKEIHASVLK-SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT 369
Query: 282 WNTMINAFVQNNFPLEGIQLFLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFV 341
WN++I +VQN E ++ F + + + DEVS+ S IAA+ L +LHA+V
Sbjct: 370 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKS-DEVSMTSIIAASGRLSNLLAGMELHAYV 429
Query: 342 IKNVAVSQVCVINALIAMYSRCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 401
IK+ S + V N LI MYS+CN + F M +KD++SW T+I+ + QN + EAL
Sbjct: 430 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEAL 489
Query: 402 MLFYEMQKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYA 461
LF ++ K+ + +D + + ++L A+S L++ I K+ H ++LR G+ + + L+D+Y
Sbjct: 490 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYG 549
Query: 462 KSGLIEAAQNVFEKSYSRERDQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTL 521
K + A VFE + +D +W SM+S NG +A + R+M++ + + V L
Sbjct: 550 KCRNMGYATRVFES--IKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVAL 609
Query: 522 ASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANE 581
IL A ++ G+++H + +R +A A++DMY+ G + A+ VF +
Sbjct: 610 LCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER 669
Query: 582 RSIVTYSTMILGYGQHGMGESALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQI 641
+ ++ Y++MI YG HG G++A+ +F M+ + PD ++F+A+L ACS+AGL+DEG
Sbjct: 670 KGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGF 729
Query: 642 FESMRTVYNIQPSTEHFCCVADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIH 701
+ M Y ++P EH+ C+ DMLGR V EA+EFV + + E+W +LLAACR H
Sbjct: 730 LKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTA-EVWCALLAACRSH 789
Query: 702 KQFELGKVVAKKLLEMEKRNGKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGS 761
+ E+G++ A++LLE+E +N G VL+SN++AE+ W +V VR +MK G++K G
Sbjct: 790 SEKEIGEIAAQRLLELEPKN--PGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGC 849
Query: 762 SWIEIAGYMNHFASKDRKHPQSDEIYSMLEELLMDM-KHAGY 802
SWIE+ G ++ F ++D+ HP+S EIY L E+ + + GY
Sbjct: 850 SWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGY 869
BLAST of Lsi04G019400 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 417.9 bits (1073), Expect = 2.6e-115
Identity = 239/711 (33.61%), Postives = 408/711 (57.38%), Query Frame = 0
Query: 95 DSYTYSSVLKACADTRNLGVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTV 154
D T SVL+ CAD+++L GK V +F+R ++ ++L + S+ + D K
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVD-NFIR---GNGFVIDSNLGSKLSLMYTNCGDLKEA 152
Query: 155 SGYSGRDLVRKVFDSMRKRTVIAWNTLIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFV 214
S +VFD ++ + WN L+ ++ ++ ++ F+ MM G++ +F
Sbjct: 153 S---------RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFS 212
Query: 215 NVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCL 274
V +FSSL +HG ++K G N V +S + Y + ++ A+KVFD
Sbjct: 213 CVSKSFSSLRSVHGGEQLHGFILKSGFGERNS--VGNSLVAFYLKNQRVDSARKVFDEMT 272
Query: 275 ERNTEVWNTMINAFVQNNFPLEGIQLFLQAMESEDAALDEVSLLSAIAAASHLQKFELAE 334
ER+ WN++IN +V N +G+ +F+Q + S +D +++S A + + L
Sbjct: 273 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGR 332
Query: 335 QLHAFVIKNVAVSQVCVINALIAMYSRCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNG 394
+H+ +K + N L+ MYS+C +D + +F M ++ VVS+ +MI+ + + G
Sbjct: 333 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 392
Query: 395 LNDEALMLFYEMQKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDS 454
L EA+ LF EM+++ + D TVTA+L+ + R D GK+ H ++ N + F+ + +
Sbjct: 393 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 452
Query: 455 YLIDMYAKSGLIEAAQNVFEKSYSRERDQATWNSMMSGYTQNGLVDQAFLVLRQMLDQK- 514
L+DMYAK G ++ A+ VF S R +D +WN+++ GY++N ++A + +L++K
Sbjct: 453 ALMDMYAKCGSMQEAELVF--SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 512
Query: 515 VMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSITHAE 574
P+ T+A +LPAC D G+++HG+ +RN + VA +L+DMY+K G++ A
Sbjct: 513 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 572
Query: 575 YVFSKANERSIVTYSTMILGYGQHGMGESALSMFHTMQKSGIRPDAVTFVAVLSACSYAG 634
+F + +V+++ MI GYG HG G+ A+++F+ M+++GI D ++FV++L ACS++G
Sbjct: 573 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 632
Query: 635 LVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGS 694
LVDEG + F MR I+P+ EH+ C+ DML R G + +AY F+ + + IWG+
Sbjct: 633 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDA-TIWGA 692
Query: 695 LLAACRIHKQFELGKVVAKKLLEMEKRNGKTGYHVLLSNIYAEERNWENVHIVRKQMKEK 754
LL CRIH +L + VA+K+ E+E N TGY+VL++NIYAE WE V +RK++ ++
Sbjct: 693 LLCGCRIHHDVKLAEKVAEKVFELEPEN--TGYYVLMANIYAEAEKWEQVKRLRKRIGQR 752
Query: 755 GLKKETGSSWIEIAGYMNHFASKDRKHPQSDEIYSMLEELLMDMKHAGYRP 804
GL+K G SWIEI G +N F + D +P+++ I + L ++ M GY P
Sbjct: 753 GLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSP 782
BLAST of Lsi04G019400 vs. ExPASy Swiss-Prot
Match:
Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)
HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-113
Identity = 258/765 (33.73%), Postives = 407/765 (53.20%), Query Frame = 0
Query: 55 PRPSTVLWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGV 114
P + LWN+II N EAL FY ++ S +V D YT+ SV+KACA + +
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRES--KVSPDKYTFPSVIKACAGLFDAEM 126
Query: 115 GKAVHAHFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRT 174
G V+ L V N+L++MYS +T R+VFD M R
Sbjct: 127 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLT-------------RARQVFDEMPVRD 186
Query: 175 VIAWNTLIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHG 234
+++WN+LI+ Y Y EA++ + + I P + +V PAF +L K +HG
Sbjct: 187 LVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHG 246
Query: 235 MLVKLGSEYVNDLYVVSSS-IFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNF 294
+K G VN + VV++ + MY + A++VFD R++ +NTMI +++
Sbjct: 247 FALKSG---VNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 306
Query: 295 PLEGIQLFLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVIN 354
E +++FL+ ++ L VS S + A HL+ LA+ ++ +++K V + V N
Sbjct: 307 VEESVRMFLENLDQFKPDLLTVS--SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN 366
Query: 355 ALIAMYSRCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMV 414
LI +Y++C + + +F++M KD VSWN++IS ++Q+G EA+ LF M +
Sbjct: 367 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 426
Query: 415 DSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVF 474
D +T L+S ++ L + GK H +++GI + + + LIDMYAK G + + +F
Sbjct: 427 DHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIF 486
Query: 475 EKSYSRERDQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGY 534
S D TWN+++S + G V QM +V+P++ T LP C
Sbjct: 487 --SSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAA 546
Query: 535 IDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILG 594
GK++H +R + + + ALI+MYSK G + ++ VF + + R +VT++ MI
Sbjct: 547 KRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYA 606
Query: 595 YGQHGMGESALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQP 654
YG +G GE AL F M+KSGI PD+V F+A++ ACS++GLVDEGL FE M+T Y I P
Sbjct: 607 YGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 666
Query: 655 STEHFCCVADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKK 714
EH+ CV D+L R ++ +A EF+ + + + IW S+L ACR E + V+++
Sbjct: 667 MIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDA-SIWASVLRACRTSGDMETAERVSRR 726
Query: 715 LLEMEKRNGKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNHF 774
++E+ + GY +L SN YA R W+ V ++RK +K+K + K G SWIE+ ++ F
Sbjct: 727 IIELNPDD--PGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVF 786
Query: 775 ASKDRKHPQSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
+S D PQS+ IY LE L M GY P L E +E
Sbjct: 787 SSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEE 806
BLAST of Lsi04G019400 vs. ExPASy TrEMBL
Match:
A0A1S4E4R9 (pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502476 PE=4 SV=1)
HSP 1 Score: 1532.7 bits (3967), Expect = 0.0e+00
Identity = 765/817 (93.64%), Postives = 789/817 (96.57%), Query Frame = 0
Query: 1 MASSATPLPLFPPPSHLPLHNRSTNPKIPTIRYRLSRLCQEGHLHLARQLFDALPRPSTV 60
MAS ATPLPL PPS+LPLH STNPKIPTIRYRLSRLCQEG LHLARQLFDALPRPSTV
Sbjct: 1 MASPATPLPLSQPPSYLPLHTHSTNPKIPTIRYRLSRLCQEGRLHLARQLFDALPRPSTV 60
Query: 61 LWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGVGKAVHA 120
LWNTIIIGLVCNNFPDEAL FY NMKSSSPQVKCDSYTYSSVLKACADTRNL VGKAVHA
Sbjct: 61 LWNTIIIGLVCNNFPDEALFFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHA 120
Query: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRTVIAWNT 180
HFLRCLMNPSRIVYNSLLNMYSMCLS TPD VSGYSG DLVRKVFD+MRKRTV+AWNT
Sbjct: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSTTPDSTMVSGYSGCDLVRKVFDTMRKRTVVAWNT 180
Query: 181 LIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
LIAWYVRTERYAEAVKQFR MMKIGIKPSPVSFVNVFPAFSS+GDFKNANVVHGMLVKLG
Sbjct: 181 LIAWYVRTERYAEAVKQFRKMMKIGIKPSPVSFVNVFPAFSSMGDFKNANVVHGMLVKLG 240
Query: 241 SEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNFPLEGIQL 300
SEYVNDLYVVSS+IFMYAELG LEFAKKVFDNCLERNTEVWNTMI+AFVQNNF LEGIQL
Sbjct: 241 SEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQL 300
Query: 301 FLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVINALIAMYS 360
F QA+ESEDAA+DEV+LLSAI+AASHLQKF LAEQLHAFVIKNVAVSQVCV+NALIAMYS
Sbjct: 301 FFQAVESEDAAIDEVTLLSAISAASHLQKFVLAEQLHAFVIKNVAVSQVCVMNALIAMYS 360
Query: 361 RCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
RCNSID SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA
Sbjct: 361 RCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
Query: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSYSRER 480
LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKS+S ER
Sbjct: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHER 480
Query: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH
Sbjct: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
Query: 541 GFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILGYGQHGMGE 600
GFSIRNDLDQNVFVATALIDMYSKSGSI HAE VFSKANERSIVTYSTMILGYGQHGMGE
Sbjct: 541 GFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANERSIVTYSTMILGYGQHGMGE 600
Query: 601 SALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV 660
SALSMFHTMQK+GI+PDAVT VAVLSACSYAGLVDEGLQIFES++TVYNIQPSTEHFCC+
Sbjct: 601 SALSMFHTMQKTGIQPDAVTLVAVLSACSYAGLVDEGLQIFESIKTVYNIQPSTEHFCCI 660
Query: 661 ADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKKLLEMEKRN 720
ADMLGR GRVD+AYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGK+VAKKLLEMEKRN
Sbjct: 661 ADMLGRAGRVDKAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKRN 720
Query: 721 GKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNHFASKDRKHP 780
GKTGYHVLLSNIYAEERNWENV IVRKQM+E+GLKKETGSSWIEIAGYMNHFASKDR+HP
Sbjct: 721 GKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRRHP 780
Query: 781 QSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
QSD+IY MLEELLM+MKHAGYRPQSTSYLGG LEPDE
Sbjct: 781 QSDQIYGMLEELLMEMKHAGYRPQSTSYLGGFLEPDE 817
BLAST of Lsi04G019400 vs. ExPASy TrEMBL
Match:
A0A5A7VGP0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002840 PE=4 SV=1)
HSP 1 Score: 1532.7 bits (3967), Expect = 0.0e+00
Identity = 765/817 (93.64%), Postives = 789/817 (96.57%), Query Frame = 0
Query: 1 MASSATPLPLFPPPSHLPLHNRSTNPKIPTIRYRLSRLCQEGHLHLARQLFDALPRPSTV 60
MAS ATPLPL PPS+LPLH STNPKIPTIRYRLSRLCQEG LHLARQLFDALPRPSTV
Sbjct: 1 MASPATPLPLSQPPSYLPLHTHSTNPKIPTIRYRLSRLCQEGRLHLARQLFDALPRPSTV 60
Query: 61 LWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGVGKAVHA 120
LWNTIIIGLVCNNFPDEAL FY NMKSSSPQVKCDSYTYSSVLKACADTRNL VGKAVHA
Sbjct: 61 LWNTIIIGLVCNNFPDEALFFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHA 120
Query: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRTVIAWNT 180
HFLRCLMNPSRIVYNSLLNMYSMCLS TPD VSGYSG DLVRKVFD+MRKRTV+AWNT
Sbjct: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSTTPDSTMVSGYSGCDLVRKVFDTMRKRTVVAWNT 180
Query: 181 LIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
LIAWYVRTERYAEAVKQFR MMKIGIKPSPVSFVNVFPAFSS+GDFKNANVVHGMLVKLG
Sbjct: 181 LIAWYVRTERYAEAVKQFRKMMKIGIKPSPVSFVNVFPAFSSMGDFKNANVVHGMLVKLG 240
Query: 241 SEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNFPLEGIQL 300
SEYVNDLYVVSS+IFMYAELG LEFAKKVFDNCLERNTEVWNTMI+AFVQNNF LEGIQL
Sbjct: 241 SEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQL 300
Query: 301 FLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVINALIAMYS 360
F QA+ESEDAA+DEV+LLSAI+AASHLQKF LAEQLHAFVIKNVAVSQVCV+NALIAMYS
Sbjct: 301 FFQAVESEDAAIDEVTLLSAISAASHLQKFVLAEQLHAFVIKNVAVSQVCVMNALIAMYS 360
Query: 361 RCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
RCNSID SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA
Sbjct: 361 RCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
Query: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSYSRER 480
LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKS+S ER
Sbjct: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHER 480
Query: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH
Sbjct: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
Query: 541 GFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILGYGQHGMGE 600
GFSIRNDLDQNVFVATALIDMYSKSGSI HAE VFSKANERSIVTYSTMILGYGQHGMGE
Sbjct: 541 GFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANERSIVTYSTMILGYGQHGMGE 600
Query: 601 SALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV 660
SALSMFHTMQK+GI+PDAVT VAVLSACSYAGLVDEGLQIFES++TVYNIQPSTEHFCC+
Sbjct: 601 SALSMFHTMQKTGIQPDAVTLVAVLSACSYAGLVDEGLQIFESIKTVYNIQPSTEHFCCI 660
Query: 661 ADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKKLLEMEKRN 720
ADMLGR GRVD+AYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGK+VAKKLLEMEKRN
Sbjct: 661 ADMLGRAGRVDKAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKRN 720
Query: 721 GKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNHFASKDRKHP 780
GKTGYHVLLSNIYAEERNWENV IVRKQM+E+GLKKETGSSWIEIAGYMNHFASKDR+HP
Sbjct: 721 GKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRRHP 780
Query: 781 QSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
QSD+IY MLEELLM+MKHAGYRPQSTSYLGG LEPDE
Sbjct: 781 QSDQIYGMLEELLMEMKHAGYRPQSTSYLGGFLEPDE 817
BLAST of Lsi04G019400 vs. ExPASy TrEMBL
Match:
A0A5D3DWX1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002720 PE=4 SV=1)
HSP 1 Score: 1529.2 bits (3958), Expect = 0.0e+00
Identity = 762/817 (93.27%), Postives = 789/817 (96.57%), Query Frame = 0
Query: 1 MASSATPLPLFPPPSHLPLHNRSTNPKIPTIRYRLSRLCQEGHLHLARQLFDALPRPSTV 60
MAS ATPLPL PPS+LPLH STNPKIPTIRYRLSRLCQEG LHLARQLFDALPRPSTV
Sbjct: 1 MASPATPLPLSQPPSYLPLHTHSTNPKIPTIRYRLSRLCQEGRLHLARQLFDALPRPSTV 60
Query: 61 LWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGVGKAVHA 120
LWNTIIIGLVCNNFPDEAL FY NMKSSSPQVKCDSYTYSSVLKACADTRNL VGKAVHA
Sbjct: 61 LWNTIIIGLVCNNFPDEALFFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHA 120
Query: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRTVIAWNT 180
HFLRCLMNPSRIVYNSLLNMYSMCLS TPD VSGYSG DLVRKVFD+MRKRTV+AWNT
Sbjct: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSTTPDSTMVSGYSGCDLVRKVFDTMRKRTVVAWNT 180
Query: 181 LIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
LIAWYVRTERYAEAVKQFR MMKIGIKPSPVSFVNVFPAFSS+GDFKNANVVHGMLVKLG
Sbjct: 181 LIAWYVRTERYAEAVKQFRKMMKIGIKPSPVSFVNVFPAFSSMGDFKNANVVHGMLVKLG 240
Query: 241 SEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNFPLEGIQL 300
SEYVNDLYVVSS+IFMYAELG LEFAKKVFDNCLERNTEVWNTMI+AFVQNNF LEGIQL
Sbjct: 241 SEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQL 300
Query: 301 FLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVINALIAMYS 360
F QA+ESEDAA+DEV+LLSAI+AASHLQKFELAEQLHAFVIKNVAVSQVCV+NALIAMYS
Sbjct: 301 FFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVSQVCVMNALIAMYS 360
Query: 361 RCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
RCNSID SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA
Sbjct: 361 RCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
Query: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSYSRER 480
LLSAASDLRNPDIGKQTHGYLLRNGIQFEGM+SYLIDMYAKSGLIEAAQNVFEKS+S +R
Sbjct: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMESYLIDMYAKSGLIEAAQNVFEKSFSHDR 480
Query: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH
Sbjct: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
Query: 541 GFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILGYGQHGMGE 600
GFSIRNDLDQNVFVATALIDMYSKSGSI HAE VFSKANERSIVTYSTMILGYGQHGMGE
Sbjct: 541 GFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANERSIVTYSTMILGYGQHGMGE 600
Query: 601 SALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV 660
SAL MFHTMQK+GI+PDAVT VAVLSACSYAGLVDEGLQIFES++TVYNIQPSTEHFCC+
Sbjct: 601 SALFMFHTMQKTGIQPDAVTLVAVLSACSYAGLVDEGLQIFESIKTVYNIQPSTEHFCCI 660
Query: 661 ADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKKLLEMEKRN 720
ADMLGR GRVD+AYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGK+VAKKLLEMEKRN
Sbjct: 661 ADMLGRAGRVDKAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKRN 720
Query: 721 GKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNHFASKDRKHP 780
GKTGYHVLLSNIYAEERNWENV IVRKQM+E+G+KKETGSSWIEIAGYMNHFASKDR+HP
Sbjct: 721 GKTGYHVLLSNIYAEERNWENVDIVRKQMRERGVKKETGSSWIEIAGYMNHFASKDRRHP 780
Query: 781 QSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
QSD+IY MLEELLM+MKHAGYRPQSTSYLGG LEPDE
Sbjct: 781 QSDQIYGMLEELLMEMKHAGYRPQSTSYLGGFLEPDE 817
BLAST of Lsi04G019400 vs. ExPASy TrEMBL
Match:
A0A0A0L1V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G620570 PE=4 SV=1)
HSP 1 Score: 1526.5 bits (3951), Expect = 0.0e+00
Identity = 765/817 (93.64%), Postives = 787/817 (96.33%), Query Frame = 0
Query: 1 MASSATPLPLFPPPSHLPLHNRSTNPKIPTIRYRLSRLCQEGHLHLARQLFDALPRPSTV 60
MA SATPLPL PSHLPLH STNPKIPTIRYRLSRLCQEG LHLARQLFDALPRPSTV
Sbjct: 1 MAFSATPLPLSQSPSHLPLHTHSTNPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTV 60
Query: 61 LWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGVGKAVHA 120
LWNTIIIGLVCNNFPDEALLFY NMKSSSPQVKCDSYTYSSVLKACADTRNL VGKAVHA
Sbjct: 61 LWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHA 120
Query: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRTVIAWNT 180
HFLRCLMNPSRIVYNSLLNMYSMC S TPDGK VSGYS DLVRKVFD+MRKRTV+AWNT
Sbjct: 121 HFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNT 180
Query: 181 LIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
LIAWYVRTERYAEAVKQF MMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG
Sbjct: 181 LIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
Query: 241 SEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNFPLEGIQL 300
SEYVNDLYVVSS+IFMYAELG LEFAKKVFDNCLERNTEVWNTMI+AFVQNNF LEGIQL
Sbjct: 241 SEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQL 300
Query: 301 FLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVINALIAMYS 360
F QA+ESEDAA+DEV+LLSAI+AASHLQKFELAEQLHAFVIKNVAV+QVCV+NALIAMYS
Sbjct: 301 FFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYS 360
Query: 361 RCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
RCNSID SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEM+KQDLMVDSVTVTA
Sbjct: 361 RCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTA 420
Query: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSYSRER 480
LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKS+S ER
Sbjct: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHER 480
Query: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
DQATWNSMMSGYTQNGLVDQAFL+LRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH
Sbjct: 481 DQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
Query: 541 GFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILGYGQHGMGE 600
GFSIRNDLDQNVFVATALIDMYSKSGSI HAE VFSKANE+SIVTYSTMILGYGQHGMGE
Sbjct: 541 GFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGE 600
Query: 601 SALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV 660
SAL MFH MQKSGI+PDAVT VAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV
Sbjct: 601 SALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV 660
Query: 661 ADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKKLLEMEKRN 720
ADMLGR GRVD+AYEFVIGLGE+GNVMEIWGSLLAACRIHKQFELGK+VAKKLLEMEK N
Sbjct: 661 ADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKIN 720
Query: 721 GKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNHFASKDRKHP 780
GKTGYHVLLSNIYAEERNWENV IVRKQM+E+GLKKETGSSWIEIAGYMNHFASKDRKHP
Sbjct: 721 GKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHP 780
Query: 781 QSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
QSD+IYSMLEELLM+MKHAGYRP STSYLGG LEPDE
Sbjct: 781 QSDQIYSMLEELLMEMKHAGYRPLSTSYLGGFLEPDE 817
BLAST of Lsi04G019400 vs. ExPASy TrEMBL
Match:
A0A6J1IPE5 (pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111477014 PE=4 SV=1)
HSP 1 Score: 1485.7 bits (3845), Expect = 0.0e+00
Identity = 739/817 (90.45%), Postives = 774/817 (94.74%), Query Frame = 0
Query: 1 MASSATPLPLFPPPSHLPLHNRSTNPKIPTIRYRLSRLCQEGHLHLARQLFDALPRPSTV 60
MASSAT L L P PSH PLHN S NPKIPTIRYRLSRLCQEG LHLARQLFD LPRPSTV
Sbjct: 1 MASSATLLSLSPLPSHSPLHNHSANPKIPTIRYRLSRLCQEGQLHLARQLFDTLPRPSTV 60
Query: 61 LWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGVGKAVHA 120
LWNTIIIGLVCNNFPDEALLFY NMKSSSPQVKCDSYTYSS+LKACADTRNL VGKAVHA
Sbjct: 61 LWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSILKACADTRNLVVGKAVHA 120
Query: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRTVIAWNT 180
HFLRCLMNPSRIV+NSLLNMYSMCLS TPDGK G+SG DLVRKVFD+MRKRTV+AWNT
Sbjct: 121 HFLRCLMNPSRIVHNSLLNMYSMCLSTTPDGKMAPGHSGHDLVRKVFDTMRKRTVVAWNT 180
Query: 181 LIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
LIAWYVRTERYAEA+KQFR+M+K+GIKPSPVSFVNVFPA S L D K ANVVHGMLVK G
Sbjct: 181 LIAWYVRTERYAEAMKQFRLMLKLGIKPSPVSFVNVFPALSCLRDLKKANVVHGMLVKFG 240
Query: 241 SEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNFPLEGIQL 300
SEYVNDLYVVSS+IFMYAELG LE +KKVFD+CLERNTEVWNTMI+A+VQNN P EGIQL
Sbjct: 241 SEYVNDLYVVSSAIFMYAELGRLECSKKVFDSCLERNTEVWNTMISAYVQNNCPFEGIQL 300
Query: 301 FLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVINALIAMYS 360
FLQAMESEDAALDEV+LLSAIAA SHLQKFELAEQLHAFV+KNVAVSQVCV+NALIAMYS
Sbjct: 301 FLQAMESEDAALDEVTLLSAIAAVSHLQKFELAEQLHAFVVKNVAVSQVCVMNALIAMYS 360
Query: 361 RCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
RCNS D+SFKIFD MPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQ +M+DSV VTA
Sbjct: 361 RCNSTDVSFKIFDYMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQGMMIDSVVVTA 420
Query: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSYSRER 480
LLSAASDLRNP+IGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEK+YS ER
Sbjct: 421 LLSAASDLRNPNIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKNYSHER 480
Query: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
DQATWN+MMSGYTQNGLV QAFLVLRQMLDQK+ PNVVTLASILPACNPSGYIDWGKQLH
Sbjct: 481 DQATWNAMMSGYTQNGLVHQAFLVLRQMLDQKITPNVVTLASILPACNPSGYIDWGKQLH 540
Query: 541 GFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILGYGQHGMGE 600
GFSIRNDLDQNVFVATALIDMYSKSGSI +AE VF KA+ERSIVTYSTMILGYGQHGMGE
Sbjct: 541 GFSIRNDLDQNVFVATALIDMYSKSGSIANAENVFRKASERSIVTYSTMILGYGQHGMGE 600
Query: 601 SALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV 660
ALSMFHTMQKSGIRPDAVTFVA+LSACSY+GLVDEGLQIFESMRTVYNIQPS EHFCCV
Sbjct: 601 RALSMFHTMQKSGIRPDAVTFVAILSACSYSGLVDEGLQIFESMRTVYNIQPSIEHFCCV 660
Query: 661 ADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKKLLEMEKRN 720
ADMLGRVGRVDEAYEFV+GLGEQGN MEIWGSLLAACRIHKQFELGKVVA KLLEMEKRN
Sbjct: 661 ADMLGRVGRVDEAYEFVVGLGEQGNAMEIWGSLLAACRIHKQFELGKVVAMKLLEMEKRN 720
Query: 721 GKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNHFASKDRKHP 780
GKTGYHVLLSNIYAEERNWENV IVRKQM+E+GLKKETGSSWIEIAGYMNHFASKDRKHP
Sbjct: 721 GKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHP 780
Query: 781 QSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
QSD+IY+MLEELLM+MKHAGY+PQSTSY GGLLEPDE
Sbjct: 781 QSDQIYNMLEELLMEMKHAGYKPQSTSYAGGLLEPDE 817
BLAST of Lsi04G019400 vs. NCBI nr
Match:
XP_038898335.1 (pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Benincasa hispida] >XP_038898336.1 pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Benincasa hispida] >XP_038898337.1 pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Benincasa hispida])
HSP 1 Score: 1537.7 bits (3980), Expect = 0.0e+00
Identity = 768/817 (94.00%), Postives = 795/817 (97.31%), Query Frame = 0
Query: 1 MASSATPLPLFPPPSHLPLHNRSTNPKIPTIRYRLSRLCQEGHLHLARQLFDALPRPSTV 60
MASS+TPLPL PPPSHLPLH+RSTNPKIPTIRYRLSRLCQEG HLARQLFDALPRPSTV
Sbjct: 1 MASSSTPLPLSPPPSHLPLHSRSTNPKIPTIRYRLSRLCQEGQPHLARQLFDALPRPSTV 60
Query: 61 LWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGVGKAVHA 120
LWNTIIIGLVCNNFPDEALLFY NMKSSSP+VKCDSYTYSSVLKACADTRNLG G AVHA
Sbjct: 61 LWNTIIIGLVCNNFPDEALLFYSNMKSSSPKVKCDSYTYSSVLKACADTRNLGFGMAVHA 120
Query: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRTVIAWNT 180
HFLRCLMNPS+IVYNSLLNMYSMCLS TPDGK VS YSG DLVRKVFD RKRTVIAWNT
Sbjct: 121 HFLRCLMNPSKIVYNSLLNMYSMCLSTTPDGKMVSSYSGCDLVRKVFDLTRKRTVIAWNT 180
Query: 181 LIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
LI+WYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG
Sbjct: 181 LISWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
Query: 241 SEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNFPLEGIQL 300
SEYVNDLYVVSS+IFMYAELG LEFAKKVFDNCLERNTEVWNTMI+AFVQNNFPLEGIQL
Sbjct: 241 SEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFPLEGIQL 300
Query: 301 FLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVINALIAMYS 360
FLQAMESEDA LDEV+LLSAIAAASHLQKFELAEQL+AFVIKNVAVS+VC++NA+IAMYS
Sbjct: 301 FLQAMESEDATLDEVTLLSAIAAASHLQKFELAEQLNAFVIKNVAVSKVCLMNAIIAMYS 360
Query: 361 RCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
RCNSIDISFKIF+NMPEKDVVSWNTMIS FVQNGLNDEALMLFYEMQKQDLM+DSVTVTA
Sbjct: 361 RCNSIDISFKIFNNMPEKDVVSWNTMISGFVQNGLNDEALMLFYEMQKQDLMIDSVTVTA 420
Query: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSYSRER 480
LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGL EAAQNVFEKSYS ER
Sbjct: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLFEAAQNVFEKSYSHER 480
Query: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
DQATWNSMMSGY QNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH
Sbjct: 481 DQATWNSMMSGYAQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
Query: 541 GFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILGYGQHGMGE 600
GFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILGYGQHGMGE
Sbjct: 541 GFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILGYGQHGMGE 600
Query: 601 SALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV 660
SALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNI+PSTEHFCCV
Sbjct: 601 SALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIEPSTEHFCCV 660
Query: 661 ADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKKLLEMEKRN 720
ADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKKLLEMEKRN
Sbjct: 661 ADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKKLLEMEKRN 720
Query: 721 GKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNHFASKDRKHP 780
KTGYHVLLSN+YAEERNWENV I+RKQM+E+GLKKETGSSWIEI+GYMNHF+SKDRKHP
Sbjct: 721 RKTGYHVLLSNMYAEERNWENVDIIRKQMRERGLKKETGSSWIEISGYMNHFSSKDRKHP 780
Query: 781 QSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
QSD+IY+ML+ELL +MKHAGYRPQS+SYL GLLEPDE
Sbjct: 781 QSDQIYNMLQELLAEMKHAGYRPQSSSYL-GLLEPDE 816
BLAST of Lsi04G019400 vs. NCBI nr
Match:
XP_008464638.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Cucumis melo] >XP_008464639.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Cucumis melo] >XP_008464640.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Cucumis melo] >XP_016903224.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Cucumis melo] >KAA0066878.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1532.7 bits (3967), Expect = 0.0e+00
Identity = 765/817 (93.64%), Postives = 789/817 (96.57%), Query Frame = 0
Query: 1 MASSATPLPLFPPPSHLPLHNRSTNPKIPTIRYRLSRLCQEGHLHLARQLFDALPRPSTV 60
MAS ATPLPL PPS+LPLH STNPKIPTIRYRLSRLCQEG LHLARQLFDALPRPSTV
Sbjct: 1 MASPATPLPLSQPPSYLPLHTHSTNPKIPTIRYRLSRLCQEGRLHLARQLFDALPRPSTV 60
Query: 61 LWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGVGKAVHA 120
LWNTIIIGLVCNNFPDEAL FY NMKSSSPQVKCDSYTYSSVLKACADTRNL VGKAVHA
Sbjct: 61 LWNTIIIGLVCNNFPDEALFFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHA 120
Query: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRTVIAWNT 180
HFLRCLMNPSRIVYNSLLNMYSMCLS TPD VSGYSG DLVRKVFD+MRKRTV+AWNT
Sbjct: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSTTPDSTMVSGYSGCDLVRKVFDTMRKRTVVAWNT 180
Query: 181 LIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
LIAWYVRTERYAEAVKQFR MMKIGIKPSPVSFVNVFPAFSS+GDFKNANVVHGMLVKLG
Sbjct: 181 LIAWYVRTERYAEAVKQFRKMMKIGIKPSPVSFVNVFPAFSSMGDFKNANVVHGMLVKLG 240
Query: 241 SEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNFPLEGIQL 300
SEYVNDLYVVSS+IFMYAELG LEFAKKVFDNCLERNTEVWNTMI+AFVQNNF LEGIQL
Sbjct: 241 SEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQL 300
Query: 301 FLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVINALIAMYS 360
F QA+ESEDAA+DEV+LLSAI+AASHLQKF LAEQLHAFVIKNVAVSQVCV+NALIAMYS
Sbjct: 301 FFQAVESEDAAIDEVTLLSAISAASHLQKFVLAEQLHAFVIKNVAVSQVCVMNALIAMYS 360
Query: 361 RCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
RCNSID SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA
Sbjct: 361 RCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
Query: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSYSRER 480
LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKS+S ER
Sbjct: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHER 480
Query: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH
Sbjct: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
Query: 541 GFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILGYGQHGMGE 600
GFSIRNDLDQNVFVATALIDMYSKSGSI HAE VFSKANERSIVTYSTMILGYGQHGMGE
Sbjct: 541 GFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANERSIVTYSTMILGYGQHGMGE 600
Query: 601 SALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV 660
SALSMFHTMQK+GI+PDAVT VAVLSACSYAGLVDEGLQIFES++TVYNIQPSTEHFCC+
Sbjct: 601 SALSMFHTMQKTGIQPDAVTLVAVLSACSYAGLVDEGLQIFESIKTVYNIQPSTEHFCCI 660
Query: 661 ADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKKLLEMEKRN 720
ADMLGR GRVD+AYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGK+VAKKLLEMEKRN
Sbjct: 661 ADMLGRAGRVDKAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKRN 720
Query: 721 GKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNHFASKDRKHP 780
GKTGYHVLLSNIYAEERNWENV IVRKQM+E+GLKKETGSSWIEIAGYMNHFASKDR+HP
Sbjct: 721 GKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRRHP 780
Query: 781 QSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
QSD+IY MLEELLM+MKHAGYRPQSTSYLGG LEPDE
Sbjct: 781 QSDQIYGMLEELLMEMKHAGYRPQSTSYLGGFLEPDE 817
BLAST of Lsi04G019400 vs. NCBI nr
Match:
TYK28024.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1529.2 bits (3958), Expect = 0.0e+00
Identity = 762/817 (93.27%), Postives = 789/817 (96.57%), Query Frame = 0
Query: 1 MASSATPLPLFPPPSHLPLHNRSTNPKIPTIRYRLSRLCQEGHLHLARQLFDALPRPSTV 60
MAS ATPLPL PPS+LPLH STNPKIPTIRYRLSRLCQEG LHLARQLFDALPRPSTV
Sbjct: 1 MASPATPLPLSQPPSYLPLHTHSTNPKIPTIRYRLSRLCQEGRLHLARQLFDALPRPSTV 60
Query: 61 LWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGVGKAVHA 120
LWNTIIIGLVCNNFPDEAL FY NMKSSSPQVKCDSYTYSSVLKACADTRNL VGKAVHA
Sbjct: 61 LWNTIIIGLVCNNFPDEALFFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHA 120
Query: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRTVIAWNT 180
HFLRCLMNPSRIVYNSLLNMYSMCLS TPD VSGYSG DLVRKVFD+MRKRTV+AWNT
Sbjct: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSTTPDSTMVSGYSGCDLVRKVFDTMRKRTVVAWNT 180
Query: 181 LIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
LIAWYVRTERYAEAVKQFR MMKIGIKPSPVSFVNVFPAFSS+GDFKNANVVHGMLVKLG
Sbjct: 181 LIAWYVRTERYAEAVKQFRKMMKIGIKPSPVSFVNVFPAFSSMGDFKNANVVHGMLVKLG 240
Query: 241 SEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNFPLEGIQL 300
SEYVNDLYVVSS+IFMYAELG LEFAKKVFDNCLERNTEVWNTMI+AFVQNNF LEGIQL
Sbjct: 241 SEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQL 300
Query: 301 FLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVINALIAMYS 360
F QA+ESEDAA+DEV+LLSAI+AASHLQKFELAEQLHAFVIKNVAVSQVCV+NALIAMYS
Sbjct: 301 FFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVSQVCVMNALIAMYS 360
Query: 361 RCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
RCNSID SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA
Sbjct: 361 RCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
Query: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSYSRER 480
LLSAASDLRNPDIGKQTHGYLLRNGIQFEGM+SYLIDMYAKSGLIEAAQNVFEKS+S +R
Sbjct: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMESYLIDMYAKSGLIEAAQNVFEKSFSHDR 480
Query: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH
Sbjct: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
Query: 541 GFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILGYGQHGMGE 600
GFSIRNDLDQNVFVATALIDMYSKSGSI HAE VFSKANERSIVTYSTMILGYGQHGMGE
Sbjct: 541 GFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANERSIVTYSTMILGYGQHGMGE 600
Query: 601 SALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV 660
SAL MFHTMQK+GI+PDAVT VAVLSACSYAGLVDEGLQIFES++TVYNIQPSTEHFCC+
Sbjct: 601 SALFMFHTMQKTGIQPDAVTLVAVLSACSYAGLVDEGLQIFESIKTVYNIQPSTEHFCCI 660
Query: 661 ADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKKLLEMEKRN 720
ADMLGR GRVD+AYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGK+VAKKLLEMEKRN
Sbjct: 661 ADMLGRAGRVDKAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKRN 720
Query: 721 GKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNHFASKDRKHP 780
GKTGYHVLLSNIYAEERNWENV IVRKQM+E+G+KKETGSSWIEIAGYMNHFASKDR+HP
Sbjct: 721 GKTGYHVLLSNIYAEERNWENVDIVRKQMRERGVKKETGSSWIEIAGYMNHFASKDRRHP 780
Query: 781 QSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
QSD+IY MLEELLM+MKHAGYRPQSTSYLGG LEPDE
Sbjct: 781 QSDQIYGMLEELLMEMKHAGYRPQSTSYLGGFLEPDE 817
BLAST of Lsi04G019400 vs. NCBI nr
Match:
XP_011654005.2 (pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Cucumis sativus] >XP_011654006.2 pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Cucumis sativus] >XP_031740200.1 pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Cucumis sativus] >KGN55492.2 hypothetical protein Csa_012479 [Cucumis sativus])
HSP 1 Score: 1528.8 bits (3957), Expect = 0.0e+00
Identity = 766/817 (93.76%), Postives = 788/817 (96.45%), Query Frame = 0
Query: 1 MASSATPLPLFPPPSHLPLHNRSTNPKIPTIRYRLSRLCQEGHLHLARQLFDALPRPSTV 60
MASSATPLPL PSHLPLH STNPKIPTIRYRLSRLCQEG LHLARQLFDALPRPSTV
Sbjct: 1 MASSATPLPLSQSPSHLPLHTHSTNPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTV 60
Query: 61 LWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGVGKAVHA 120
LWNTIIIGLVCNNFPDEALLFY NMKSSSPQVKCDSYTYSSVLKACADTRNL VGKAVHA
Sbjct: 61 LWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHA 120
Query: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRTVIAWNT 180
HFLRCLMNPSRIVYNSLLNMYSMC S TPDGK VSGYS DLVRKVFD+MRKRTV+AWNT
Sbjct: 121 HFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNT 180
Query: 181 LIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
LIAWYVRTERYAEAVKQF MMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG
Sbjct: 181 LIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
Query: 241 SEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNFPLEGIQL 300
SEYVNDLYVVSS+IFMYAELG LEFAKKVFDNCLERNTEVWNTMI+AFVQNNF LEGIQL
Sbjct: 241 SEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQL 300
Query: 301 FLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVINALIAMYS 360
F QA+ESEDAA+DEV+LLSAI+AASHLQKFELAEQLHAFVIKNVAV+QVCV+NALIAMYS
Sbjct: 301 FFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYS 360
Query: 361 RCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
RCNSID SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEM+KQDLMVDSVTVTA
Sbjct: 361 RCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTA 420
Query: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSYSRER 480
LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKS+S ER
Sbjct: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHER 480
Query: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
DQATWNSMMSGYTQNGLVDQAFL+LRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH
Sbjct: 481 DQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
Query: 541 GFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILGYGQHGMGE 600
GFSIRNDLDQNVFVATALIDMYSKSGSI HAE VFSKANE+SIVTYSTMILGYGQHGMGE
Sbjct: 541 GFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGE 600
Query: 601 SALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV 660
SAL MFH MQKSGI+PDAVT VAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV
Sbjct: 601 SALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV 660
Query: 661 ADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKKLLEMEKRN 720
ADMLGR GRVD+AYEFVIGLGE+GNVMEIWGSLLAACRIHKQFELGK+VAKKLLEMEK N
Sbjct: 661 ADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKIN 720
Query: 721 GKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNHFASKDRKHP 780
GKTGYHVLLSNIYAEERNWENV IVRKQM+E+GLKKETGSSWIEIAGYMNHFASKDRKHP
Sbjct: 721 GKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHP 780
Query: 781 QSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
QSD+IYSMLEELLM+MKHAGYRP STSYLGG LEPDE
Sbjct: 781 QSDQIYSMLEELLMEMKHAGYRPLSTSYLGGFLEPDE 817
BLAST of Lsi04G019400 vs. NCBI nr
Match:
XP_022976704.1 (pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Cucurbita maxima])
HSP 1 Score: 1485.7 bits (3845), Expect = 0.0e+00
Identity = 739/817 (90.45%), Postives = 774/817 (94.74%), Query Frame = 0
Query: 1 MASSATPLPLFPPPSHLPLHNRSTNPKIPTIRYRLSRLCQEGHLHLARQLFDALPRPSTV 60
MASSAT L L P PSH PLHN S NPKIPTIRYRLSRLCQEG LHLARQLFD LPRPSTV
Sbjct: 1 MASSATLLSLSPLPSHSPLHNHSANPKIPTIRYRLSRLCQEGQLHLARQLFDTLPRPSTV 60
Query: 61 LWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGVGKAVHA 120
LWNTIIIGLVCNNFPDEALLFY NMKSSSPQVKCDSYTYSS+LKACADTRNL VGKAVHA
Sbjct: 61 LWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSILKACADTRNLVVGKAVHA 120
Query: 121 HFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRTVIAWNT 180
HFLRCLMNPSRIV+NSLLNMYSMCLS TPDGK G+SG DLVRKVFD+MRKRTV+AWNT
Sbjct: 121 HFLRCLMNPSRIVHNSLLNMYSMCLSTTPDGKMAPGHSGHDLVRKVFDTMRKRTVVAWNT 180
Query: 181 LIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLG 240
LIAWYVRTERYAEA+KQFR+M+K+GIKPSPVSFVNVFPA S L D K ANVVHGMLVK G
Sbjct: 181 LIAWYVRTERYAEAMKQFRLMLKLGIKPSPVSFVNVFPALSCLRDLKKANVVHGMLVKFG 240
Query: 241 SEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNFPLEGIQL 300
SEYVNDLYVVSS+IFMYAELG LE +KKVFD+CLERNTEVWNTMI+A+VQNN P EGIQL
Sbjct: 241 SEYVNDLYVVSSAIFMYAELGRLECSKKVFDSCLERNTEVWNTMISAYVQNNCPFEGIQL 300
Query: 301 FLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVINALIAMYS 360
FLQAMESEDAALDEV+LLSAIAA SHLQKFELAEQLHAFV+KNVAVSQVCV+NALIAMYS
Sbjct: 301 FLQAMESEDAALDEVTLLSAIAAVSHLQKFELAEQLHAFVVKNVAVSQVCVMNALIAMYS 360
Query: 361 RCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMVDSVTVTA 420
RCNS D+SFKIFD MPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQ +M+DSV VTA
Sbjct: 361 RCNSTDVSFKIFDYMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQGMMIDSVVVTA 420
Query: 421 LLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKSYSRER 480
LLSAASDLRNP+IGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEK+YS ER
Sbjct: 421 LLSAASDLRNPNIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQNVFEKNYSHER 480
Query: 481 DQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLH 540
DQATWN+MMSGYTQNGLV QAFLVLRQMLDQK+ PNVVTLASILPACNPSGYIDWGKQLH
Sbjct: 481 DQATWNAMMSGYTQNGLVHQAFLVLRQMLDQKITPNVVTLASILPACNPSGYIDWGKQLH 540
Query: 541 GFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILGYGQHGMGE 600
GFSIRNDLDQNVFVATALIDMYSKSGSI +AE VF KA+ERSIVTYSTMILGYGQHGMGE
Sbjct: 541 GFSIRNDLDQNVFVATALIDMYSKSGSIANAENVFRKASERSIVTYSTMILGYGQHGMGE 600
Query: 601 SALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCV 660
ALSMFHTMQKSGIRPDAVTFVA+LSACSY+GLVDEGLQIFESMRTVYNIQPS EHFCCV
Sbjct: 601 RALSMFHTMQKSGIRPDAVTFVAILSACSYSGLVDEGLQIFESMRTVYNIQPSIEHFCCV 660
Query: 661 ADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKKLLEMEKRN 720
ADMLGRVGRVDEAYEFV+GLGEQGN MEIWGSLLAACRIHKQFELGKVVA KLLEMEKRN
Sbjct: 661 ADMLGRVGRVDEAYEFVVGLGEQGNAMEIWGSLLAACRIHKQFELGKVVAMKLLEMEKRN 720
Query: 721 GKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNHFASKDRKHP 780
GKTGYHVLLSNIYAEERNWENV IVRKQM+E+GLKKETGSSWIEIAGYMNHFASKDRKHP
Sbjct: 721 GKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHFASKDRKHP 780
Query: 781 QSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
QSD+IY+MLEELLM+MKHAGY+PQSTSY GGLLEPDE
Sbjct: 781 QSDQIYNMLEELLMEMKHAGYKPQSTSYAGGLLEPDE 817
BLAST of Lsi04G019400 vs. TAIR 10
Match:
AT3G22150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 998.4 bits (2580), Expect = 3.3e-291
Identity = 496/808 (61.39%), Postives = 631/808 (78.09%), Query Frame = 0
Query: 1 MASSATPLPLFPP-----PSHLPLHNRST------NPKIPTIRYRLSRLCQEGHLHLARQ 60
MA SA PLP PP PS + ST P+ P+IR RLS++CQ+G+ LARQ
Sbjct: 1 MAGSALPLPPPPPLSLQSPSQNQTRHSSTFSPPTLTPQTPSIRSRLSKICQDGNPQLARQ 60
Query: 61 LFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADT 120
LFDA+P+P+TVLWNTIIIG +CNN P EALLFY MK ++P CD+YTYSS LKACA+T
Sbjct: 61 LFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAET 120
Query: 121 RNLGVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDS 180
+NL GKAVH H +RCL N SR+V+NSL+NMY CL+ PD D+VRKVFD+
Sbjct: 121 KNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN-APD------CFEYDVVRKVFDN 180
Query: 181 MRKRTVIAWNTLIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNA 240
MR++ V+AWNTLI+WYV+T R AEA +QF +MM++ +KPSPVSFVNVFPA S K A
Sbjct: 181 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 240
Query: 241 NVVHGMLVKLGSEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFV 300
NV +G+++KLG EYV DL+VVSS+I MYAELG +E +++VFD+C+ERN EVWNTMI +V
Sbjct: 241 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV 300
Query: 301 QNNFPLEGIQLFLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQV 360
QN+ +E I+LFL+A+ S++ DEV+ L A +A S LQ+ EL Q H FV KN +
Sbjct: 301 QNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPI 360
Query: 361 CVINALIAMYSRCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQ 420
++N+L+ MYSRC S+ SF +F +M E+DVVSWNTMISAFVQNGL+DE LML YEMQKQ
Sbjct: 361 VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 420
Query: 421 DLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKSGLIEAAQ 480
+D +TVTALLSAAS+LRN +IGKQTH +L+R GIQFEGM+SYLIDMY+KSGLI +Q
Sbjct: 421 GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQ 480
Query: 481 NVFEKSYSRERDQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNP 540
+FE S ERDQATWNSM+SGYTQNG ++ FLV R+ML+Q + PN VT+ASILPAC+
Sbjct: 481 KLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQ 540
Query: 541 SGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTM 600
G +D GKQLHGFSIR LDQNVFVA+AL+DMYSK+G+I +AE +FS+ ER+ VTY+TM
Sbjct: 541 IGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTM 600
Query: 601 ILGYGQHGMGESALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYN 660
ILGYGQHGMGE A+S+F +MQ+SGI+PDA+TFVAVLSACSY+GL+DEGL+IFE MR VYN
Sbjct: 601 ILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYN 660
Query: 661 IQPSTEHFCCVADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVV 720
IQPS+EH+CC+ DMLGRVGRV+EAYEFV GLGE+GN+ E+WGSLL +C++H + EL + V
Sbjct: 661 IQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETV 720
Query: 721 AKKLLEMEKRNGKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYM 780
+++L + +K +GY VLLSN+YAEE+ W++V VR+ M+EKGLKKE G S IEIAGY+
Sbjct: 721 SERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYV 780
Query: 781 NHFASKDRKHPQSDEIYSMLEELLMDMK 798
N F S+D++HP S EIY +++ L DM+
Sbjct: 781 NCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
BLAST of Lsi04G019400 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 432.2 bits (1110), Expect = 9.4e-121
Identity = 261/826 (31.60%), Postives = 460/826 (55.69%), Query Frame = 0
Query: 10 LFPPPSHLPLHNRSTNPKIPTIRYRLSRLCQEGHLHLARQLFDALPRPSTVLWNTIIIGL 69
+FP PS L +R +P + + + A +F + R S W ++
Sbjct: 14 IFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSR-SPEWWIDLLRSK 73
Query: 70 VCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGVGKAVHAHFLRCLMNP 129
V +N EA+L Y +M +K D+Y + ++LKA AD +++ +GK +HAH +
Sbjct: 74 VRSNLLREAVLTYVDMIVLG--IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGV 133
Query: 130 SRI-VYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRTVIAWNTLIAWYVRT 189
+ V N+L+N+Y C G G V KVFD + +R ++WN+LI+
Sbjct: 134 DSVTVANTLVNLYRKC-----------GDFG--AVYKVFDRISERNQVSWNSLISSLCSF 193
Query: 190 ERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSL---GDFKNANVVHGMLVKLGSEYVN 249
E++ A++ FR M+ ++PS + V+V A S+L VH ++ G
Sbjct: 194 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE---L 253
Query: 250 DLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNFPLEGIQLFLQAM 309
+ +++++ + MY +LG L +K + + R+ WNT++++ QN LE ++ +L+ M
Sbjct: 254 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE-YLREM 313
Query: 310 ESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVI-NALIAMYSRCNS 369
E DE ++ S + A SHL+ ++LHA+ +KN ++ + + +AL+ MY C
Sbjct: 314 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 373
Query: 370 IDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQ-DLMVDSVTVTALLS 429
+ ++FD M ++ + WN MI+ + QN + EAL+LF M++ L+ +S T+ ++
Sbjct: 374 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 433
Query: 430 AASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSYSRERDQ 489
A + HG++++ G+ + + + L+DMY++ G I+ A +F K +RD
Sbjct: 434 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK--MEDRDL 493
Query: 490 ATWNSMMSGYTQNGLVDQAFLVLRQM--LDQKV---------MPNVVTLASILPACNPSG 549
TWN+M++GY + + A L+L +M L++KV PN +TL +ILP+C
Sbjct: 494 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 553
Query: 550 YIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMIL 609
+ GK++H ++I+N+L +V V +AL+DMY+K G + + VF + +++++T++ +I+
Sbjct: 554 ALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 613
Query: 610 GYGQHGMGESALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQ 669
YG HG G+ A+ + M G++P+ VTF++V +ACS++G+VDEGL+IF M+ Y ++
Sbjct: 614 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 673
Query: 670 PSTEHFCCVADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAK 729
PS++H+ CV D+LGR GR+ EAY+ + + N W SLL A RIH E+G++ A+
Sbjct: 674 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQ 733
Query: 730 KLLEMEKRNGKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNH 789
L+++E ++VLL+NIY+ W+ VR+ MKE+G++KE G SWIE ++
Sbjct: 734 NLIQLEP--NVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHK 793
Query: 790 FASKDRKHPQSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
F + D HPQS+++ LE L M+ GY P ++ L + E ++
Sbjct: 794 FVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEK 815
BLAST of Lsi04G019400 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 417.9 bits (1073), Expect = 1.8e-116
Identity = 239/711 (33.61%), Postives = 408/711 (57.38%), Query Frame = 0
Query: 95 DSYTYSSVLKACADTRNLGVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTV 154
D T SVL+ CAD+++L GK V +F+R ++ ++L + S+ + D K
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVD-NFIR---GNGFVIDSNLGSKLSLMYTNCGDLKEA 152
Query: 155 SGYSGRDLVRKVFDSMRKRTVIAWNTLIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFV 214
S +VFD ++ + WN L+ ++ ++ ++ F+ MM G++ +F
Sbjct: 153 S---------RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFS 212
Query: 215 NVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCL 274
V +FSSL +HG ++K G N V +S + Y + ++ A+KVFD
Sbjct: 213 CVSKSFSSLRSVHGGEQLHGFILKSGFGERNS--VGNSLVAFYLKNQRVDSARKVFDEMT 272
Query: 275 ERNTEVWNTMINAFVQNNFPLEGIQLFLQAMESEDAALDEVSLLSAIAAASHLQKFELAE 334
ER+ WN++IN +V N +G+ +F+Q + S +D +++S A + + L
Sbjct: 273 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGR 332
Query: 335 QLHAFVIKNVAVSQVCVINALIAMYSRCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNG 394
+H+ +K + N L+ MYS+C +D + +F M ++ VVS+ +MI+ + + G
Sbjct: 333 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 392
Query: 395 LNDEALMLFYEMQKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDS 454
L EA+ LF EM+++ + D TVTA+L+ + R D GK+ H ++ N + F+ + +
Sbjct: 393 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 452
Query: 455 YLIDMYAKSGLIEAAQNVFEKSYSRERDQATWNSMMSGYTQNGLVDQAFLVLRQMLDQK- 514
L+DMYAK G ++ A+ VF S R +D +WN+++ GY++N ++A + +L++K
Sbjct: 453 ALMDMYAKCGSMQEAELVF--SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 512
Query: 515 VMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSITHAE 574
P+ T+A +LPAC D G+++HG+ +RN + VA +L+DMY+K G++ A
Sbjct: 513 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 572
Query: 575 YVFSKANERSIVTYSTMILGYGQHGMGESALSMFHTMQKSGIRPDAVTFVAVLSACSYAG 634
+F + +V+++ MI GYG HG G+ A+++F+ M+++GI D ++FV++L ACS++G
Sbjct: 573 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 632
Query: 635 LVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGS 694
LVDEG + F MR I+P+ EH+ C+ DML R G + +AY F+ + + IWG+
Sbjct: 633 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDA-TIWGA 692
Query: 695 LLAACRIHKQFELGKVVAKKLLEMEKRNGKTGYHVLLSNIYAEERNWENVHIVRKQMKEK 754
LL CRIH +L + VA+K+ E+E N TGY+VL++NIYAE WE V +RK++ ++
Sbjct: 693 LLCGCRIHHDVKLAEKVAEKVFELEPEN--TGYYVLMANIYAEAEKWEQVKRLRKRIGQR 752
Query: 755 GLKKETGSSWIEIAGYMNHFASKDRKHPQSDEIYSMLEELLMDMKHAGYRP 804
GL+K G SWIEI G +N F + D +P+++ I + L ++ M GY P
Sbjct: 753 GLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSP 782
BLAST of Lsi04G019400 vs. TAIR 10
Match:
AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 417.5 bits (1072), Expect = 2.4e-116
Identity = 243/752 (32.31%), Postives = 416/752 (55.32%), Query Frame = 0
Query: 42 GHLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSS 101
G L A ++FD +P + WNT+I V N P AL Y NM+ + S + +
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS--FPA 189
Query: 102 VLKACADTRNLGVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRD 161
+LKACA R++ G +H+ ++ + + + N+L++MY+ ++
Sbjct: 190 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLS------------- 249
Query: 162 LVRKVFDSMR-KRTVIAWNTLIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAF 221
R++FD + K + WN++++ Y + + E ++ FR M G P+ + V+ A
Sbjct: 250 AARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 309
Query: 222 SSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSSIFMYAELGWLEFAKKVFDNCLERNTEV 281
K +H ++K S + ++LYV ++ I MY G + A+++ +
Sbjct: 310 DGFSYAKLGKEIHASVLK-SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT 369
Query: 282 WNTMINAFVQNNFPLEGIQLFLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFV 341
WN++I +VQN E ++ F + + + DEVS+ S IAA+ L +LHA+V
Sbjct: 370 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKS-DEVSMTSIIAASGRLSNLLAGMELHAYV 429
Query: 342 IKNVAVSQVCVINALIAMYSRCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 401
IK+ S + V N LI MYS+CN + F M +KD++SW T+I+ + QN + EAL
Sbjct: 430 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEAL 489
Query: 402 MLFYEMQKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYA 461
LF ++ K+ + +D + + ++L A+S L++ I K+ H ++LR G+ + + L+D+Y
Sbjct: 490 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYG 549
Query: 462 KSGLIEAAQNVFEKSYSRERDQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTL 521
K + A VFE + +D +W SM+S NG +A + R+M++ + + V L
Sbjct: 550 KCRNMGYATRVFES--IKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVAL 609
Query: 522 ASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANE 581
IL A ++ G+++H + +R +A A++DMY+ G + A+ VF +
Sbjct: 610 LCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER 669
Query: 582 RSIVTYSTMILGYGQHGMGESALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQI 641
+ ++ Y++MI YG HG G++A+ +F M+ + PD ++F+A+L ACS+AGL+DEG
Sbjct: 670 KGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGF 729
Query: 642 FESMRTVYNIQPSTEHFCCVADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIH 701
+ M Y ++P EH+ C+ DMLGR V EA+EFV + + E+W +LLAACR H
Sbjct: 730 LKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTA-EVWCALLAACRSH 789
Query: 702 KQFELGKVVAKKLLEMEKRNGKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGS 761
+ E+G++ A++LLE+E +N G VL+SN++AE+ W +V VR +MK G++K G
Sbjct: 790 SEKEIGEIAAQRLLELEPKN--PGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGC 849
Query: 762 SWIEIAGYMNHFASKDRKHPQSDEIYSMLEEL 793
SWIE+ G ++ F ++D+ HP+S EIY L E+
Sbjct: 850 SWIEMDGKVHKFTARDKSHPESKEIYEKLSEV 859
BLAST of Lsi04G019400 vs. TAIR 10
Match:
AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 412.5 bits (1059), Expect = 7.7e-115
Identity = 258/765 (33.73%), Postives = 407/765 (53.20%), Query Frame = 0
Query: 55 PRPSTVLWNTIIIGLVCNNFPDEALLFYRNMKSSSPQVKCDSYTYSSVLKACADTRNLGV 114
P + LWN+II N EAL FY ++ S +V D YT+ SV+KACA + +
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRES--KVSPDKYTFPSVIKACAGLFDAEM 126
Query: 115 GKAVHAHFLRCLMNPSRIVYNSLLNMYSMCLSITPDGKTVSGYSGRDLVRKVFDSMRKRT 174
G V+ L V N+L++MYS +T R+VFD M R
Sbjct: 127 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLT-------------RARQVFDEMPVRD 186
Query: 175 VIAWNTLIAWYVRTERYAEAVKQFRMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHG 234
+++WN+LI+ Y Y EA++ + + I P + +V PAF +L K +HG
Sbjct: 187 LVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHG 246
Query: 235 MLVKLGSEYVNDLYVVSSS-IFMYAELGWLEFAKKVFDNCLERNTEVWNTMINAFVQNNF 294
+K G VN + VV++ + MY + A++VFD R++ +NTMI +++
Sbjct: 247 FALKSG---VNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 306
Query: 295 PLEGIQLFLQAMESEDAALDEVSLLSAIAAASHLQKFELAEQLHAFVIKNVAVSQVCVIN 354
E +++FL+ ++ L VS S + A HL+ LA+ ++ +++K V + V N
Sbjct: 307 VEESVRMFLENLDQFKPDLLTVS--SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN 366
Query: 355 ALIAMYSRCNSIDISFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMQKQDLMV 414
LI +Y++C + + +F++M KD VSWN++IS ++Q+G EA+ LF M +
Sbjct: 367 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 426
Query: 415 DSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVF 474
D +T L+S ++ L + GK H +++GI + + + LIDMYAK G + + +F
Sbjct: 427 DHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIF 486
Query: 475 EKSYSRERDQATWNSMMSGYTQNGLVDQAFLVLRQMLDQKVMPNVVTLASILPACNPSGY 534
S D TWN+++S + G V QM +V+P++ T LP C
Sbjct: 487 --SSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAA 546
Query: 535 IDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSITHAEYVFSKANERSIVTYSTMILG 594
GK++H +R + + + ALI+MYSK G + ++ VF + + R +VT++ MI
Sbjct: 547 KRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYA 606
Query: 595 YGQHGMGESALSMFHTMQKSGIRPDAVTFVAVLSACSYAGLVDEGLQIFESMRTVYNIQP 654
YG +G GE AL F M+KSGI PD+V F+A++ ACS++GLVDEGL FE M+T Y I P
Sbjct: 607 YGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 666
Query: 655 STEHFCCVADMLGRVGRVDEAYEFVIGLGEQGNVMEIWGSLLAACRIHKQFELGKVVAKK 714
EH+ CV D+L R ++ +A EF+ + + + IW S+L ACR E + V+++
Sbjct: 667 MIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDA-SIWASVLRACRTSGDMETAERVSRR 726
Query: 715 LLEMEKRNGKTGYHVLLSNIYAEERNWENVHIVRKQMKEKGLKKETGSSWIEIAGYMNHF 774
++E+ + GY +L SN YA R W+ V ++RK +K+K + K G SWIE+ ++ F
Sbjct: 727 IIELNPDD--PGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVF 786
Query: 775 ASKDRKHPQSDEIYSMLEELLMDMKHAGYRPQSTSYLGGLLEPDE 818
+S D PQS+ IY LE L M GY P L E +E
Sbjct: 787 SSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEE 806
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9LIE7 | 4.6e-290 | 61.39 | Pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Arabidop... | [more] |
| Q7Y211 | 1.3e-119 | 31.60 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
| Q9M1V3 | 2.0e-115 | 32.15 | Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... | [more] |
| Q9SN39 | 2.6e-115 | 33.61 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| Q9SS60 | 1.1e-113 | 33.73 | Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S4E4R9 | 0.0e+00 | 93.64 | pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Cucumis ... | [more] |
| A0A5A7VGP0 | 0.0e+00 | 93.64 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A5D3DWX1 | 0.0e+00 | 93.27 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A0A0L1V7 | 0.0e+00 | 93.64 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G620570 PE=4 SV=1 | [more] |
| A0A6J1IPE5 | 0.0e+00 | 90.45 | pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Cucurbit... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038898335.1 | 0.0e+00 | 94.00 | pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Benincasa ... | [more] |
| XP_008464638.1 | 0.0e+00 | 93.64 | PREDICTED: pentatricopeptide repeat-containing protein At3g22150, chloroplastic ... | [more] |
| TYK28024.1 | 0.0e+00 | 93.27 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
| XP_011654005.2 | 0.0e+00 | 93.76 | pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Cucumis sa... | [more] |
| XP_022976704.1 | 0.0e+00 | 90.45 | pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Cucurbita ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G22150.1 | 3.3e-291 | 61.39 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G57430.1 | 9.4e-121 | 31.60 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G18750.1 | 1.8e-116 | 33.61 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G63370.1 | 2.4e-116 | 32.31 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G03580.1 | 7.7e-115 | 33.73 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
