Lsi04G018870 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G018870
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosomal RNA small subunit methyltransferase F
Locationchr04: 25995521 .. 26003699 (+)
RNA-Seq ExpressionLsi04G018870
SyntenyLsi04G018870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCTGCTCTGCTTCGTAATCTCGCAGTGTTTCTCTTTGAATGAAGAAAGCGACGGATTGTCTTCTCAAAACCTTTCGCAGAACCTTCTTTACTCTCCAAAACCCTAAACCCCAGGTTTCTCTCTCCTCCTCACTCACTCTCTCCTCTCTGTTTGTGTTTCATTCTGTGGCTTAACTTGGAAGAAAAATGGCGCAACAGATGGAAGATCTGCCAGAAAGATACAGTTTCAATCCTGTTTTGAGATGGAATCCTCAAGTGGAGGAGTATTTCGCGAAGGCTTACGGAGAGGAGCAGTTCGCCCTCATTTCTAAAGCTCTTACGTACTTTTCTTCCTTCTGTTTGCTTTATTCTCTGTTTTCTTAGTAGTTATGAGCTTCATGATAAACAGGGCCGACTGAATGTAATTCTCAGTTGTGCTGGTTTTTTTTAGTGTTTATGCATTTGAGCTCGAGCGAAGTCTAAATTTAATTACGTATATTGAGCTTCTAAATTGACATAACGTAATTAATTGTGCACAAGCGTCATTATGTTATACTTTTAGGAAATGCAGGGATTTTTGTTATTGAATTTGTGTAAGCGTTGCATCAGCTTCCACTGCGTATATATTTTGACTTCTTTGTAATGTCCTTTACGTTTGGTCTTTATTTCAAATCATCATGTTCATTCTTACTCTTTCATTAACTTGAAAGTATGCCATTCTTCGTAGCGTGCCTGGTGAACCCGGAGATTCTGCCGGAAAAAAATATTTTGGTTATGAATATTAATAATGGGCATCTAGTTTACTGCTGATATTAGAAGAAAAAAAAGGTTCCCACACATTAACTATATTTTCAAAATGCAAATACGCACCCATTAATTAAACATTTGAATTGTTCATTTTGGAGGACACTGTTCCTAATTTTCTTTGCTACTTTACCCAGCCATTTTGCTACACTAGTAGTTGCTGGCCATCTAATCATATGGTCTGTTTAAAGGTGCAAATATTATATTGTGTATTTGTGTGTCGTGCTAAAAACATGTGCTGTCGAGTTTGATTCTGTTGAAATATTGTTAACAAGTATTTCTTATGATCTTATCTTTGTTGTATGTACACCAATGTTATACATAGTCAGGATATATTCTAATAGTTTAACTAATCCAATGGTCAGGCGTCCGTCTTGTTACTCATGCATACGTGTAAATACACTCAAGTCCACAACTGATACTGTCATTGAGAAGTTATCAACTATTGTTAAAGAAATGGGACATTCAAATTCTGAAAACAAAACATTAATGGGTGGTGGTGATGTTGATGTCAATGGTATTGAACTTATGCAAAGTGTCAGTCAGAGGGCCTCAATGAAGATTGAAGATGAGAAAAACTCAATTACTGAAAAGTTTCAACATCCGTCCATCTCAAGGTGTCAGGTACCTGGGTTAGACTATGTTGTATTTGTAAGGGGTTCAGGACCACACGCAATTGATTATGGTTATGCAAATGGCAGACCTCCAAAAGAAGTGATTGTGAGTCGAAAATGTGCTGAGGCAGTTCTTCGCGGAGCTCAGGTTAGCTGATTTGTTTGTGTGAGAATGTTATGAACAGTTTACAGTATCTATTGGCATTGTTGTCATTCTTTTCTGGAATACATTTATATTTTTTCTTTTTAATGTCATCAACCACCGTGTGATTGCTTGCTATTATCTTGTTATTCATTATTTTGTATCTTGCATTACATTTTGTCTTGTGATAAGACAAGCAATTTGATATGAGTTGTGTTGAATATCACAATGTTTGCTGATATTATCAATTAAATATTACTTGAAAATTTCTGTACATTGTGGAGGAACTTGCTTGTTGTTATTATTGCTTCTCATCTATCATATCATTCATCCGAATGATGTACTTCATTGATTTTAGAGAAAATATTTTAATTTCTATTGTTACTTTCTACTGATCTTGGTTATACACTTATCACAAAGCTGTTTTCTAATTGTAGTTTCCTATAGGTTTATGTTCCCGGTGTTATGGCTTGCAGTGCTCATGTTGAGAAAGGGGATACAGTTGCTGTTTCAGTTGCTGTGGAGCAGCCTGGGCTTGATGGTGGATGGAGCCTTGGTATTACTCGAGGGACTGTTGTGCAGGGCTTACCGACGGGTAGGAAGTGCTTCATCATTCAATTTACTAAACTTTAGTTTCTTTAATCTAACATTTTAACTCTCTTTCTCTCTCTCTCTATCTTTCTATATATATATATATATATTTGGTAATATTGTTATGGATTTTGGGAAACTAAAGAAAATGAGTGCAATTAGCAATAATCTATTTTGCTTAAAAGCATGGGAGACCCTTTTCTGTATTCACTTTAGTCCTTGCCTGCATATTATTTCCCATTTGTTTGGAAGACGTGTAGTTTTGTTGACTTGATGAAGTTCACTGCTTAGAGTAGAAACATTTCTTCAGGGGAATTATTATGTTGAGAAAATATTTGTAGTTCACTCCTTTCTGCTGCTGTCTTGTGCTTTCCTCTAGCTGGTCAATTGCATTTTCTTAGTTGTACTTTTTGAGTTTGAAAACAAGACTTAATAACTTCCCCGTTTTGTTTTGTTTTGTTTTGTTTTGTTTGTTTGTTTGTTTTTGTTTTGTTTTATTATTATTATTTTTTTAAATTTAAAATTAAATTATTTTTTTAAAATTTATACGTATTTGATGTTTATAGGTTACATTACTATAAATAATTAATGCTATGCTTATTGCAGATCCTTATCACTCTGAAAGGCATGGATTATATATTGGTCAAGGAACAACAGCAATGTCAAGGGCTGGGACTTTTCGTGTTTCAGAAGGAATTGCTGTGGACATGAATAATAGAGTATTTAAACTTCCATCCTTTTATGGTACATTTCTTCTTTGTATGACCTAAGTGTGTGTGTATAAATATATTAATAATAATTAGAAACATTTCATCAAATAATAATAACAACAACAACAACAGTCATGGCTTTGGAACTATGGTTTTGTATCATTTGCTTTATATAATTTTGCGTAAGTAGTTGAAGATCAAGAATTTGCATGGTGGTTTTGTTTTGGACATTTTGGTAACTCGTTGTATATGTAAATGCTCATAACCTTATAGATTATTTTGCATTTCTTGTTCCTTGGTTGTAAAGCTCAGCTTTAGGTTTTCTTTGCAGTCTAGATTACTTGGTAGGTTTTTTATCTGCAGGATGCATTTAATCTTAGCATTTATCGTATATACAATTGCGATTGTCTTACATAAACCTGTTTGTTCTTAGATTTAATATTTTCTCTGACAGATGTGCTCGAGGGAGAAATCTTTCTTCAAAACCTGCCAAGCATTGTCACTGCTCATGCTTTAGGTATTTTCGACAGACCTACTTTTGTTTCAGTGACTCTAAAGTTTCTGTTTCACTAGCGAAGTTACTACCCTTTTGGTTTGCCTTCCATTCAGTCTATTACTAGGCAAATACTTGAGCTGTGTTTCTCATTAATAGGATTTGCAGATTAGAACTTATAATGATTTTTTTCTTTAACAATTAATATATATTTTCCCAAGTCGTTATTTTCCCTCCATTCTACTGTCTATTCTGTCACTTTGCATGCATTTGTATCCTTGTTTGTTTTGTATTTTTCACTTTGTTAACTATGCATGCTTCGGTTTCCGCCTAAATGGATATCTTTTTCCTATTTCTCACCTTAGATCCACAAAAAGGTGAACGTATATTAGACATGTGTGCGGCACCTGGGGGGAAAACAACTGCAATTGCAATCCTTATGAAGGATGAAGGGGAGGTCATTGCTGCTGATAGGTCTCACAATAAGGTACAATGGTACAAACTGGAGATATAGAAAAGAGCTTTTCTATTACTATCCGTTTCTCATATGCCGTATTTAAACCATGGAGCTATTTTTCACAAGTGTAGCTTTTGCAATGGTCTGCTTTCTTTGTTAATCCTTCATCAAACTTGTGTTCAGGTGATGGATATTCAAAAATTGGCCGCTGAGATGGGGTTGAGCTGTATAATAACCTATAAGCTTGATGCTCTTAAATCTGTCAATCGAAACACTGATTCCTGCAAGGGCACTGCTTCAGTTTGCATTGATGCCAATGATGGTGTTGTGAACAATATTTCCAATTCAACGAATCTCGACAATGTAAAACCATCCTCAATTACTGAAGTATTGCAAGCTGATGAGACTGAAAAGCAGAATGGTAGATATCTTTATTCTGATGGCTTTAAGAAACTATGAGTCTAGTTTCTTGGTTTTCCAACCCTTCCCTTTTGGTCTATATTTCACATAGAAAAAGCTATAAGTTATTTATATACACACAGAATCCTAGTGGAATAGTTTCTTACAGATCTAGGAGTTTTAAGTAAGGGTCCAAGGAATAAAGTGAACTTCTAGAATTCATCTCCCACATGTGAAAGTGTTGTGAGTGAAACACATAACACTTCAATTTATAAAAATCTGAGTAAACTATTAGTTAATTTTAGTTCGATGTGTGGAATGTAACAGTTAGTCCTTGACATCATGGTTGCTTATGGAAAGTCCTCTGACTATGTAAATTTATAAAAATGTGTATTTTGATTCTCCTTTTGGGTACATTACAATTATATTAGTTTTTGGATTCTTTGTAAAACGAACTTGCATCGATCCCCTCATTTTTCTTTGGACAGTTCTATTATTTTCTGAATTTCTTATATAATTTCCTTTGTTAAAAAGGGAAAATTCTCAAGCAAGCTTGAACTAAGGCCAGTGCTACTAATAGGAAATATATTGAGAATATTAATAGGATGTTAGTTAGAGCATATGGGTAATTAACTTGGACCTATTTAGTTATGACTTATAAATAGAGGAAGTAAGAGATCTTAGAGGGGGATTGTTCAGTATGGGACTTGTGGAGAGATAACTCTCTCGAAAGGCTTTTGATATTGCTCTCTAGGAAGGCTATTGATATTGTAATTTCTCTTTTGAAATTGCAATATGGTTCGATTTCAAATTTTGTATTATTGGGATCCTAACACAGGATTACTTTTATTTTCTGGTTTTGTTCCCAGTTTCACTTCGTTGACTGCATCATATATGTGTTTCTTTATCTGTGGTTGCAAATTCAGTTTCTGAAATCATTTTATCAACTATGAGGAACTGAATGGGGAATTTTTCTTTTACTAAAGCGAAACAAAAAAAGTATGGTAGGAGACCACGAAATGGTCCAGGAAGAAATCAATGCATGGGTGGTAGAGCTGAAAACTCGAAAGGTTTTGCCCCCAACAGTTTTGACAGAGTCCTTCTTGATGCTCCTTGTTCGGCCCTTGGTTTAAGACCTCGACTATTTGCTGGGGAGGTAGAATTACTTCAGTTATTTTTGAATGTGTGTTTACAATATAATGTTTGGTTGGGAAACAGTTTTGTTATATCTAATTACTTTCCAAATTTATGCTAATGCATGTTCAATATGTTTCTGGTTTGTCTAAAGTTCCGACAGATGGAAACTTGAGGTTAATAATATATTGGTTTGCCAGGAAACAATTGCATCGTTGAAGAACCATGCAAAGTATCAGAGACGCATGTTTGATCAGGCCGTCCAATTAGTTCGTCCAGGTGGAGTAATTGTATATTCAACGTGAGTATGCCACATTGTATTTCTTCATATTTGATGTATACCATGAGTTTGTACGGTATGGATAAAATGTCTGCTTTTGAACTTATATGGTTGCCACTCCTTAATAAGAACAGCCTTCAAGATTTAGCTGCCATGGCTATATCTTAAGAGATAATAAAGAGGGAGGAACCACGGGATCTTTTAGGACAAGAATATCGATGTAGATCAGGTTTTTATATTTGCTATAAAAAAAATAATTAAAAAAAGGATATTCAATCCATGGAATTACAACAAGCTTTCCCAATTGTTTAGAAGGGAAGCATGTGAATAGGATGCAAATAAATTAGAGCTTTTACACCAGGAAATAGCATAGTAAATGGCAAGGTTGAAGAACAGATGTAGATCAGGTTTGGGAAATTAATTGTTCCGATGTTTTTACTAGGCCCAAACTCAATATCCATTTCCCCCCTAAAAGATCCTGTGGTTCCTCCATCTAAAAGATCCCGGATCCCGGGCTATATCCTGGGATCCCGCTCATTACATTATAGTTATGGTCCACCTCACTAATAATCCTTGTGATACATTCGACTGAAGTTTTTGCCGTCGTTTTATTCTACTGAAGTTTTTGGTAATAATTTTACACTGTCAGCTGTACGATTAACCCTGGTGAGAACGAAGCTCTGGTTCGTTATGCTTTGGATACGTATAAGTTCTTGACCTTGGCACCACAGGTTAGATTGTAACACTATTATTGCTTCCTTCCTGTTTTTACTTGCATTAACCATGGCACCACAGCTTTCCTGTTCTTTCAGTATTCACTCAGTTTGGACAATCTAATTTATCTGATTCACATTCATCTGTGCAAACTTTGTGATATTTCAGCATCCAAGAATTGGGGGACCTGGCCTTGTTGGTCATTTTGAGTTTGCTGATCATTCTGTGGAGTAAGTGCTTTGACCTAACACCTCCTCCCCCTCATCGTGAAAAATTACATATACATTGTTCATAGAAAATTTCGTTTTCATCCCCAAAACCAGTTTAATTGGTTAACTTAATCTATTTTGAATAAGTAGTAAAATAGATACCTATTTAGAACTAAAGAGTTGTTCAGGAATTAACCTGTGAACAAACCAAGCACCCAAAATCATCAAGTGATAAAAATGCCAACTCTCTCTAACCATGAAAATACCTTAATCTAGTCAAATCAAGTAGAAGAAAAAGTGTTAGAAGTGTCCAAACTTTATAATAAAATACGAAATTTAACATTAATGTATTCAACTTAACCAAAAGAACCGACACTCACATAAATATTTATTCAGCCACGTAAATGCACATAGCTAATCATAAAATAGACTAAAGATGGGAACTTAGCGTATGGAGGATGTTGATTTTATCATTTCTACTGTTAGTCTAAAAAATAAGTTGACACTTTAGAGTTAGTAATCTTACTAGCTTGGTTTGTTGCAACTTGCAAGTAGGCTAAGTTCATCAGATTGGTCGAAGAAACATACACGTTGACTTGAACACTCGCGAACAAAAGAAGAGGAAAAAAGAAAGAAAAAGGAAAAAAGAAAATGTGCTCGTATGGATGAGTAAACCCTAGACTGAATGGAGTATATGGTTATATTGGTCATGCCATGGCGTGGCATGCCTAAGTGCAATAGATATTCCATGGTTTAGATTTCATTTGGTATGCATAAATGCTGACAAAACCTATTAGTCAATCATTATCTGTTTGTGGTAGTGAAGTTCATTTACATTTCTTTCAGATAAGGCATCTCCCAGATTGTCCTGTCCTTCCATGTCTTTACATACATTTGTGAACAAGTAAAAATGATTTTCCTAATTTTTCTCTGGACTTATGATTAGTAATTTCACCAACTTTAAGAACAAGGGTTGGTTAAGACACAAAATTTTAGGGTAAAATATCAAGTACTGACAATTTTTCATATTACCTCCCTTCATTTTTGCTATAAAAGAATCAAGTTAAGAATTATATGAATGACGTGTCAAAATGTAAATGGAAGAAGTACGTATAACGGTAGTCCTCAAATTTTAGAAGTATGACATTGGTGAAAGAAGGAGAGAGGAATTAGAGAATATGCATCGAGTTAGAAAGAGAAAAGTGAATTGTAATTTGTAAAGAGATATTAGTGCAAAAAGTGGATAAGTTTTAAGTGCTTTCAAGAGCTGAATGTGACATTTTGTACTTGGTTTTGCAGAGAATGGTTAAGACCGGGTGAAGAACACCTTGTTCAAAGGTTCGATCCATCATCATCGCTCGATACAATAGGATTTTTCATTGCCAAATTTTCTGTTGGCTCCAAAGATTCGGAACAGCGAGATCATCTTGTAAATGCATTGTAATCGACACAGGACGACATTCTTGTTTGAAGTTAAATTGCAACTTGTGTTGTTAAGGTGAGGAATACAATTGTTCCTAACACCTTATCAATTTATTAATTCCAGTCTGTCATAAAGTATTGATGGAACGTGATGTAATATTGCTAACGCTAATGCTTTTATTAATTTATAATTTGTTACTTCCGTAAATCAATAAAGTAGTCAGAAGAAAT

mRNA sequence

TGCTGCTCTGCTTCGTAATCTCGCAGTGTTTCTCTTTGAATGAAGAAAGCGACGGATTGTCTTCTCAAAACCTTTCGCAGAACCTTCTTTACTCTCCAAAACCCTAAACCCCAGAAAAATGGCGCAACAGATGGAAGATCTGCCAGAAAGATACAGTTTCAATCCTGTTTTGAGATGGAATCCTCAAGTGGAGGAGTATTTCGCGAAGGCTTACGGAGAGGAGCAGTTCGCCCTCATTTCTAAAGCTCTTACGCGTCCGTCTTGTTACTCATGCATACGTGTAAATACACTCAAGTCCACAACTGATACTGTCATTGAGAAGTTATCAACTATTGTTAAAGAAATGGGACATTCAAATTCTGAAAACAAAACATTAATGGGTGGTGGTGATGTTGATGTCAATGGTATTGAACTTATGCAAAGTGTCAGTCAGAGGGCCTCAATGAAGATTGAAGATGAGAAAAACTCAATTACTGAAAAGTTTCAACATCCGTCCATCTCAAGGTGTCAGGTACCTGGGTTAGACTATGTTGTATTTGTAAGGGGTTCAGGACCACACGCAATTGATTATGGTTATGCAAATGGCAGACCTCCAAAAGAAGTGATTGTGAGTCGAAAATGTGCTGAGGCAGTTCTTCGCGGAGCTCAGGTTTATGTTCCCGGTGTTATGGCTTGCAGTGCTCATGTTGAGAAAGGGGATACAGTTGCTGTTTCAGTTGCTGTGGAGCAGCCTGGGCTTGATGGTGGATGGAGCCTTGGTATTACTCGAGGGACTGTTGTGCAGGGCTTACCGACGGATCCTTATCACTCTGAAAGGCATGGATTATATATTGGTCAAGGAACAACAGCAATGTCAAGGGCTGGGACTTTTCGTGTTTCAGAAGGAATTGCTGTGGACATGAATAATAGAGTATTTAAACTTCCATCCTTTTATGATGTGCTCGAGGGAGAAATCTTTCTTCAAAACCTGCCAAGCATTGTCACTGCTCATGCTTTAGATCCACAAAAAGGTGAACGTATATTAGACATGTGTGCGGCACCTGGGGGGAAAACAACTGCAATTGCAATCCTTATGAAGGATGAAGGGGAGGTCATTGCTGCTGATAGGTCTCACAATAAGAAAAGAGCTTTTCTATTACTATCCGTTTCTCATATGCCGTATTTAAACCATGGAGCTATTTTTCACAAGTGTAGCTTTTGCAATGGTCTGCTTTCTTTGTTAATCCTTCATCAAACTTGTGTTCAGGTGATGGATATTCAAAAATTGGCCGCTGAGATGGGGTTGAGCTGTATAATAACCTATAAGCTTGATGCTCTTAAATCTGTCAATCGAAACACTGATTCCTGCAAGGGCACTGCTTCAGTTTGCATTGATGCCAATGATGGTGTTGTGAACAATATTTCCAATTCAACGAATCTCGACAATGTAAAACCATCCTCAATTACTGAAGTATTGCAAGCTGATGAGACTGAAAAGCAGAATGCGAAACAAAAAAAGTATGGTAGGAGACCACGAAATGGTCCAGGAAGAAATCAATGCATGGGTGGTAGAGCTGAAAACTCGAAAGGTTTTGCCCCCAACAGTTTTGACAGAGTCCTTCTTGATGCTCCTTGTTCGGCCCTTGGTTTAAGACCTCGACTATTTGCTGGGGAGGTAGAATTACTTCATTCCGACAGATGGAAACTTGAGGTTAATAATATATTGGTTTGCCAGGAAACAATTGCATCGTTGAAGAACCATGCAAAGTATCAGAGACGCATGTTTGATCAGGCCGTCCAATTAGTTCGTCCAGGTGGAGTAATTGTATATTCAACCTGTACGATTAACCCTGGTGAGAACGAAGCTCTGGTTCGTTATGCTTTGGATACGTATAAGTTCTTGACCTTGGCACCACAGCATCCAAGAATTGGGGGACCTGGCCTTGTTGGTCATTTTGAGTTTGCTGATCATTCTGTGGAAGAATGGTTAAGACCGGGTGAAGAACACCTTGTTCAAAGGTTCGATCCATCATCATCGCTCGATACAATAGGATTTTTCATTGCCAAATTTTCTGTTGGCTCCAAAGATTCGGAACAGCGAGATCATCTTGTAAATGCATTGTAATCGACACAGGACGACATTCTTGTTTGAAGTTAAATTGCAACTTGTGTTGTTAAGGTGAGGAATACAATTGTTCCTAACACCTTATCAATTTATTAATTCCAGTCTGTCATAAAGTATTGATGGAACGTGATGTAATATTGCTAACGCTAATGCTTTTATTAATTTATAATTTGTTACTTCCGTAAATCAATAAAGTAGTCAGAAGAAAT

Coding sequence (CDS)

ATGGCGCAACAGATGGAAGATCTGCCAGAAAGATACAGTTTCAATCCTGTTTTGAGATGGAATCCTCAAGTGGAGGAGTATTTCGCGAAGGCTTACGGAGAGGAGCAGTTCGCCCTCATTTCTAAAGCTCTTACGCGTCCGTCTTGTTACTCATGCATACGTGTAAATACACTCAAGTCCACAACTGATACTGTCATTGAGAAGTTATCAACTATTGTTAAAGAAATGGGACATTCAAATTCTGAAAACAAAACATTAATGGGTGGTGGTGATGTTGATGTCAATGGTATTGAACTTATGCAAAGTGTCAGTCAGAGGGCCTCAATGAAGATTGAAGATGAGAAAAACTCAATTACTGAAAAGTTTCAACATCCGTCCATCTCAAGGTGTCAGGTACCTGGGTTAGACTATGTTGTATTTGTAAGGGGTTCAGGACCACACGCAATTGATTATGGTTATGCAAATGGCAGACCTCCAAAAGAAGTGATTGTGAGTCGAAAATGTGCTGAGGCAGTTCTTCGCGGAGCTCAGGTTTATGTTCCCGGTGTTATGGCTTGCAGTGCTCATGTTGAGAAAGGGGATACAGTTGCTGTTTCAGTTGCTGTGGAGCAGCCTGGGCTTGATGGTGGATGGAGCCTTGGTATTACTCGAGGGACTGTTGTGCAGGGCTTACCGACGGATCCTTATCACTCTGAAAGGCATGGATTATATATTGGTCAAGGAACAACAGCAATGTCAAGGGCTGGGACTTTTCGTGTTTCAGAAGGAATTGCTGTGGACATGAATAATAGAGTATTTAAACTTCCATCCTTTTATGATGTGCTCGAGGGAGAAATCTTTCTTCAAAACCTGCCAAGCATTGTCACTGCTCATGCTTTAGATCCACAAAAAGGTGAACGTATATTAGACATGTGTGCGGCACCTGGGGGGAAAACAACTGCAATTGCAATCCTTATGAAGGATGAAGGGGAGGTCATTGCTGCTGATAGGTCTCACAATAAGAAAAGAGCTTTTCTATTACTATCCGTTTCTCATATGCCGTATTTAAACCATGGAGCTATTTTTCACAAGTGTAGCTTTTGCAATGGTCTGCTTTCTTTGTTAATCCTTCATCAAACTTGTGTTCAGGTGATGGATATTCAAAAATTGGCCGCTGAGATGGGGTTGAGCTGTATAATAACCTATAAGCTTGATGCTCTTAAATCTGTCAATCGAAACACTGATTCCTGCAAGGGCACTGCTTCAGTTTGCATTGATGCCAATGATGGTGTTGTGAACAATATTTCCAATTCAACGAATCTCGACAATGTAAAACCATCCTCAATTACTGAAGTATTGCAAGCTGATGAGACTGAAAAGCAGAATGCGAAACAAAAAAAGTATGGTAGGAGACCACGAAATGGTCCAGGAAGAAATCAATGCATGGGTGGTAGAGCTGAAAACTCGAAAGGTTTTGCCCCCAACAGTTTTGACAGAGTCCTTCTTGATGCTCCTTGTTCGGCCCTTGGTTTAAGACCTCGACTATTTGCTGGGGAGGTAGAATTACTTCATTCCGACAGATGGAAACTTGAGGTTAATAATATATTGGTTTGCCAGGAAACAATTGCATCGTTGAAGAACCATGCAAAGTATCAGAGACGCATGTTTGATCAGGCCGTCCAATTAGTTCGTCCAGGTGGAGTAATTGTATATTCAACCTGTACGATTAACCCTGGTGAGAACGAAGCTCTGGTTCGTTATGCTTTGGATACGTATAAGTTCTTGACCTTGGCACCACAGCATCCAAGAATTGGGGGACCTGGCCTTGTTGGTCATTTTGAGTTTGCTGATCATTCTGTGGAAGAATGGTTAAGACCGGGTGAAGAACACCTTGTTCAAAGGTTCGATCCATCATCATCGCTCGATACAATAGGATTTTTCATTGCCAAATTTTCTGTTGGCTCCAAAGATTCGGAACAGCGAGATCATCTTGTAAATGCATTGTAA

Protein sequence

MAQQMEDLPERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNTLKSTTDTVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNSITEKFQHPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQGTTAMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCSFCNGLLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCIDANDGVVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRAENSKGFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKNHAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLVGHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKFSVGSKDSEQRDHLVNAL
Homology
[Close]
BLAST of Lsi04G018870 vs. ExPASy Swiss-Prot
Match: Q84MA1 (rRNA (cytosine-C(5))-methyltransferase NOP2C OS=Arabidopsis thaliana OX=3702 GN=NOP2C PE=2 SV=1)

HSP 1 Score: 686.4 bits (1770), Expect = 3.2e-196
Identity = 375/666 (56.31%), Postives = 446/666 (66.97%), Query Frame = 0 

Query: 1   MAQQMEDLP---ERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNT 60
           ++ QME  P   ERY ++PVLRWNP+VE+YF KAYG + FA ISKALTRPS YSCIRVNT
Sbjct: 33  ISHQMEMGPSDSERYCYDPVLRWNPEVEDYFTKAYGPDHFARISKALTRPSSYSCIRVNT 92

Query: 61  LKSTTDTVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNS 120
           +K+T+D VIEKL+ I+ +                    G++L+Q           D  + 
Sbjct: 93  VKTTSDAVIEKLTKILND-----------------SEEGLKLVQ----------PDGSSP 152

Query: 121 ITEKFQHPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQ 180
           +T         +CQ+PGLDYVVFV GSGPH I+Y      PPKEV+VSRKCAEAVLRGAQ
Sbjct: 153 VT---------KCQIPGLDYVVFVNGSGPHKIEYDSGLENPPKEVLVSRKCAEAVLRGAQ 212

Query: 181 VYVPGVMACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLY 240
           VYVPGV+AC+AHVEKGD VAV VA+EQPG +G WS+ +TRGT +QGLPTDPY+ ER GLY
Sbjct: 213 VYVPGVLACTAHVEKGDAVAVCVAMEQPGDEGDWSVNMTRGTTLQGLPTDPYYRERSGLY 272

Query: 241 IGQGTTAMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQK 300
           IG GT  +SRAG FRV  GIAVD+N+RVF+LPS +++LEGEIFLQNLPSI+ AHALDPQK
Sbjct: 273 IGMGTAMLSRAGMFRVPNGIAVDLNHRVFRLPSLHNILEGEIFLQNLPSIIVAHALDPQK 332

Query: 301 GERILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHK 360
           GERILDMCAAPGGKTTAIAILM DEGE++AADRSHNK                       
Sbjct: 333 GERILDMCAAPGGKTTAIAILMNDEGEIVAADRSHNK----------------------- 392

Query: 361 CSFCNGLLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSV------NRNTDSCK 420
                              V+ +Q L+AEMG +CI T KLDALKSV      N +T    
Sbjct: 393 -------------------VLVVQNLSAEMGFTCITTCKLDALKSVCLPTTLNESTILIN 452

Query: 421 GTASVCIDANDGVVNNISNSTNLDNVKPSSITEVLQADETEKQN-------AKQKKYGRR 480
           G  S  + ++  + +N    T++ + +  +     + D TE+ N       A  +K   R
Sbjct: 453 GDNSSSMTSHSELSSN-EEMTSVTSRRSEADKSCEKNDSTEQPNGGDNVSQAYIRKNKGR 512

Query: 481 PRNGPGRNQCMGGRAENSKGFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLE 540
            +NG GR QC GGRA  S+GF PNSFDRVLLDAPCSALGLRPRLFAG             
Sbjct: 513 LKNGRGRTQCQGGRAGKSQGFPPNSFDRVLLDAPCSALGLRPRLFAG------------- 572

Query: 541 VNNILVCQETIASLKNHAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDT 600
                   ET+ SL+NH  YQR+M DQAVQLVR GG++VYSTCTINP ENEA+VRYALD 
Sbjct: 573 -------LETVVSLRNHGWYQRKMLDQAVQLVRVGGILVYSTCTINPSENEAVVRYALDK 599

Query: 601 YKFLTLAPQHPRIGGPGLVGHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKF 651
           Y+FL+LAPQHPRIGGPGLVG  EF D  +EEWL+PGEE LVQ+FDPSS LDTIGFFIAKF
Sbjct: 633 YRFLSLAPQHPRIGGPGLVGRCEFPDGYIEEWLKPGEEELVQKFDPSSELDTIGFFIAKF 599

[Close]
BLAST of Lsi04G018870 vs. ExPASy Swiss-Prot
Match: Q7TS68 (tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 OS=Mus musculus OX=10090 GN=Nsun6 PE=2 SV=2)

HSP 1 Score: 216.1 bits (549), Expect = 1.2e-54
Identity = 167/553 (30.20%), Postives = 231/553 (41.77%), Query Frame = 0 

Query: 118 ITEKFQHPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQ 177
           + ++F   SI   Q P L  V+ +  +GP          R   EVIV  +C  AVLRGA 
Sbjct: 75  LQKQFGESSIPVVQHPALPDVLLIPMTGPRK-----NIERQQGEVIVGAQCGNAVLRGAH 134

Query: 178 VYVPGVMACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLY 237
           VYVPG+++ S  ++ GD ++V   +      G      T+                  ++
Sbjct: 135 VYVPGIVSASKFMKAGDVISVYSDINGKCKKGAKEFDGTK------------------VF 194

Query: 238 IGQGTTAMSRAGTFR---VSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALD 297
           +G G + +SR   F      +GI + M   ++  PSF +VL   IFLQNLPS V AH LD
Sbjct: 195 LGNGISELSRKDIFNGLPDLKGIGIRMTEPIYLSPSFDNVLPSYIFLQNLPSTVVAHVLD 254

Query: 298 PQKGERILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAI 357
           PQ GE+ILDMCAAPGGKTT  A LM+D+GEVIA D+   K                    
Sbjct: 255 PQPGEKILDMCAAPGGKTTHTAALMQDKGEVIALDKILTK-------------------- 314

Query: 358 FHKCSFCNGLLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTA 417
                                 V  +++ A+ +GL  I  +  DA K++           
Sbjct: 315 ----------------------VNKLKQNASLLGLHSIRAFCFDATKALK---------- 374

Query: 418 SVCIDANDGVVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQC 477
              +D  DG+                                                  
Sbjct: 375 ---LDTTDGI-------------------------------------------------- 434

Query: 478 MGGRAENSKGFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQET 537
                E    F P SFDR++LDAPCS +G RP                      + C  T
Sbjct: 435 -----EGGPPFLPESFDRIILDAPCSGMGQRPN---------------------MACTWT 463

Query: 538 IASLKNHAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQH 597
           +  + ++   QR++   AVQL++PGGV+VYSTCTI   ENE  V +AL T+  L L PQ 
Sbjct: 495 LKEVTSYQPLQRKLLHVAVQLLKPGGVLVYSTCTITLAENEEQVAWALRTFPCLQLQPQE 463

Query: 598 PRIGGPGLVGHFEFADHSVEEWLRPGEEHLVQRFDPS----------------------- 645
           P+IGG G+VG    A  ++E+  +      +QRFDPS                       
Sbjct: 555 PQIGGEGMVG----AGLTLEQLKQ------LQRFDPSVVPLQNMDTDSLGEARREDMIWL 463

[Close]
BLAST of Lsi04G018870 vs. ExPASy Swiss-Prot
Match: Q8TEA1 (tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 OS=Homo sapiens OX=9606 GN=NSUN6 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.6e-49
Identity = 170/608 (27.96%), Postives = 244/608 (40.13%), Query Frame = 0 

Query: 77  GHSNSENKTLMGGGDVDVNGIELMQSVSQRASM----------KIEDEKNSITEKFQHP- 136
           G  N E  T +G  + +     L++ +S   S            ++  KN + ++ Q   
Sbjct: 20  GFMNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHLASVQHVKNLLLDELQKQF 79

Query: 137 ---SISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPG 196
              S+   Q P L  V+ +   GP          +   E IV  +C  AVLRGA VY PG
Sbjct: 80  NGLSVPILQHPDLQDVLLIPVIGPRK-----NIKKQQCEAIVGAQCGNAVLRGAHVYAPG 139

Query: 197 VMACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQGT 256
           +++ S  ++ GD ++V   ++     G      T+                  +++G G 
Sbjct: 140 IVSASQFMKAGDVISVYSDIKGKCKKGAKEFDGTK------------------VFLGNGI 199

Query: 257 TAMSRAGTFR---VSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGE 316
           + +SR   F      +G+ + M   V+  PSF  VL   +FLQNLPS + +H L+PQ GE
Sbjct: 200 SELSRKEIFSGLPELKGMGIRMTEPVYLSPSFDSVLPRYLFLQNLPSALVSHVLNPQPGE 259

Query: 317 RILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCS 376
           +ILD+CAAPGGKTT IA LM D+GEVIA D+  NK                         
Sbjct: 260 KILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNK------------------------- 319

Query: 377 FCNGLLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCID 436
                            V  I++ A  +GL+ I  +  D  K+V                
Sbjct: 320 -----------------VEKIKQNALLLGLNSIRAFCFDGTKAV---------------- 379

Query: 437 ANDGVVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRA 496
                         LD V+ +                                       
Sbjct: 380 -------------KLDMVEDT--------------------------------------- 439

Query: 497 ENSKGFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLK 556
           E    F P SFDR+LLDAPCS +G RP                      + C  ++  + 
Sbjct: 440 EGEPPFLPESFDRILLDAPCSGMGQRPN---------------------MACTWSVKEVA 463

Query: 557 NHAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGG 616
           ++   QR++F  AVQL++P GV+VYSTCTI   ENE  V +AL  +  L L PQ P+IGG
Sbjct: 500 SYQPLQRKLFTAAVQLLKPEGVLVYSTCTITLAENEEQVAWALTKFPCLQLQPQEPQIGG 463

Query: 617 PGLVGHFEFADHSVEEWLRPGEEHLVQRFDPS-----------------------SSLDT 645
            G+ G    A  S E+  +      +QRFDPS                       ++ D+
Sbjct: 560 EGMRG----AGLSCEQLKQ------LQRFDPSAVPLPDTDMDSLREARREDMLRLANKDS 463

[Close]
BLAST of Lsi04G018870 vs. ExPASy Swiss-Prot
Match: O57712 (tRNA (cytosine(72)-C(5))-methyltransferase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=PH1991 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.7e-29
Identity = 147/625 (23.52%), Postives = 234/625 (37.44%), Query Frame = 0 

Query: 23  QVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNTLKSTTDTVIEKLSTIVKEMGHSNSE 82
           ++ EY+   +G+E+   I K L  P  +  IRVNTLK + + +I                
Sbjct: 12  ELREYYKNLFGKEEANKIMKKLREPVEHYYIRVNTLKISREKLI---------------- 71

Query: 83  NKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNSITEKFQHPSISRCQVPGLDYVVFVR 142
                  G++   G++ ++S                              P L   ++  
Sbjct: 72  -------GELKKEGLKPLRS------------------------------PYLPEGLYFV 131

Query: 143 GSGPHAIDYGYANGRPPKEVIVSRK-CAEAVLRGAQVYVPGVMACSAHVEKGDTVAVSVA 202
             GP+  D    +  P   V+V+ K  AE+V +GA +Y PGV+    ++++GD V +   
Sbjct: 132 REGPNFSD----DFEPKLPVVVANKYAAESVYQGAMLYAPGVLKADKNIKEGDEVQI--- 191

Query: 203 VEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQGTTAMSRAGTFRVSEGIAVDM 262
                                    DP      GL +G G   M        + G+AV++
Sbjct: 192 ------------------------RDP-----KGLLVGIGIARMDYKEMTEATRGLAVEV 251

Query: 263 NNRVFKLPSFYDVL---EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAIL 322
               FKLPS  ++    +G  + Q LPS+VTA  L+P++ + I+DM AAPGGKTT IA L
Sbjct: 252 TLPKFKLPSLSELKAFEKGYFYPQGLPSMVTARVLEPKEDDVIIDMAAAPGGKTTHIAQL 311

Query: 323 MKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCSFCNGLLSLLILHQTCVQVM 382
           ++++GE+IA D+S N+ R                                          
Sbjct: 312 LENKGEIIAIDKSKNRLR------------------------------------------ 371

Query: 383 DIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCIDANDGVVNNISNSTNLDNVK 442
            +++    +G+  +   ++DA K  +                                  
Sbjct: 372 KMEENIKRLGVKNVKLVQMDARKLPD---------------------------------- 382

Query: 443 PSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRAENSKGFAPNSFDRVLLDAP 502
                                               +G +A           D++LLDAP
Sbjct: 432 ------------------------------------LGIKA-----------DKILLDAP 382

Query: 503 CSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKNHAKYQRRMFDQAVQLVRP 562
           C+ALG+RP+L            W+         + T+  ++  A+YQR     A++ +R 
Sbjct: 492 CTALGVRPKL------------WE---------ERTLKHIEATARYQRAFIWAAIKSLRR 382

Query: 563 GGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLVGHFEFADHSVEEWLR 622
           GGV+VYSTCT++  ENE  V++ +   K + L  Q   IG PG+                
Sbjct: 552 GGVLVYSTCTLSYEENEGNVKFMI--RKGMKLEEQSIFIGSPGI---------------- 382

Query: 623 PGEEHLVQRFDPSSSLDTIGFFIAK 644
               + VQRF P   L T GFFIAK
Sbjct: 612 --GMNKVQRFYPHKHL-TQGFFIAK 382

[Close]
BLAST of Lsi04G018870 vs. ExPASy Swiss-Prot
Match: Q9V106 (tRNA (cytosine(49)-C(5))-methyltransferase OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=272844 GN=PYRAB06230 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-10
Identity = 36/95 (37.89%), Postives = 56/95 (58.95%), Query Frame = 0 

Query: 488 NSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKNHAKYQRR 547
           N+FDRVLLDAPCS++G+  + F        +  W            +I  +  H++ Q+R
Sbjct: 178 NTFDRVLLDAPCSSVGMIRKNFK------FARTW------------SIGKVYYHSRLQKR 237

Query: 548 MFDQAVQLVRPGGVIVYSTCTINPGENEALVRYAL 583
           +   A + ++PGGV+VYSTCT++P ENE +V + L
Sbjct: 238 LILAAYKSLKPGGVLVYSTCTVDPLENEEVVDFLL 254


HSP 2 Score: 51.2 bits (121), Expect = 5.1e-05
Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0 

Query: 277 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNK 335
           G I  Q   S++    LDP+  E ILDM AAPG KTT +A  M++EG +IA D   ++
Sbjct: 90  GLIIPQEASSMIPPVVLDPKPSEVILDMAAAPGSKTTQMAQYMENEGCIIANDAKRDR 147

[Close]
BLAST of Lsi04G018870 vs. ExPASy TrEMBL
Match: A0A5A7SU66 (Putative methyltransferase NSUN6 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00390 PE=3 SV=1)

HSP 1 Score: 1065.8 bits (2755), Expect = 7.1e-308
Identity = 545/653 (83.46%), Postives = 565/653 (86.52%), Query Frame = 0 

Query: 1   MAQQMEDLPERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNTLKS 60
           MAQQMEDLPERYS+NPVLRWNPQVEEYF KAYG E F+ ISKALTRPSCYSCIRVNTLKS
Sbjct: 1   MAQQMEDLPERYSYNPVLRWNPQVEEYFVKAYGAEHFSHISKALTRPSCYSCIRVNTLKS 60

Query: 61  TTDTVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNSITE 120
           TTDTVIEKLSTIVKEM   NSE+KTL+ GGDVD NGI+LMQS SQRAS+KIEDEK S+TE
Sbjct: 61  TTDTVIEKLSTIVKEMDRPNSEDKTLV-GGDVDANGIDLMQSDSQRASIKIEDEKKSVTE 120

Query: 121 KFQHPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYV 180
           KFQHPSISRCQVPGLDYVVFVRGSGPH IDYGYANGRPPKEVIVSRKCAEAVLRGAQVYV
Sbjct: 121 KFQHPSISRCQVPGLDYVVFVRGSGPHTIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYV 180

Query: 181 PGVMACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQ 240
           PGVMACSAHVEKGD VAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSER+GLYIGQ
Sbjct: 181 PGVMACSAHVEKGDAVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERNGLYIGQ 240

Query: 241 GTTAMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGER 300
           GTTAMSRAG FRVS GIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGER
Sbjct: 241 GTTAMSRAGIFRVSGGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGER 300

Query: 301 ILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCSF 360
           ILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNK                          
Sbjct: 301 ILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNK-------------------------- 360

Query: 361 CNGLLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCIDA 420
                           VMDIQKLAAEMGLSCI+TYKLDALKSVNRN DSCKGT+SVCIDA
Sbjct: 361 ----------------VMDIQKLAAEMGLSCIVTYKLDALKSVNRNGDSCKGTSSVCIDA 420

Query: 421 NDGVVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRAE 480
           NDGVVNN+SNS NL+NV+PSS+TEV + D+T+ QNAKQKK G RPRNGPGRNQCMGGRAE
Sbjct: 421 NDGVVNNVSNSMNLNNVEPSSVTEVSEVDKTKMQNAKQKKNGWRPRNGPGRNQCMGGRAE 480

Query: 481 NSKGFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKN 540
           NS+GFAPNSFDRVLLDAPCSALGLRPRLFAGE                    ETIASL+N
Sbjct: 481 NSRGFAPNSFDRVLLDAPCSALGLRPRLFAGE--------------------ETIASLRN 540

Query: 541 HAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGP 600
           HAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALD YKFLTLAPQHPRIGGP
Sbjct: 541 HAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDKYKFLTLAPQHPRIGGP 590

Query: 601 GLVGHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKFSVGSKDSEQ 654
           GLVGHFEFADH VEEWLRPGEEHLVQRFDPSS LDTIGFFIAKFSVG+KD EQ
Sbjct: 601 GLVGHFEFADHFVEEWLRPGEEHLVQRFDPSSPLDTIGFFIAKFSVGAKDFEQ 590

[Close]
BLAST of Lsi04G018870 vs. ExPASy TrEMBL
Match: A0A1S3CS06 (putative methyltransferase NSUN6 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504116 PE=3 SV=1)

HSP 1 Score: 1060.4 bits (2741), Expect = 3.0e-306
Identity = 542/650 (83.38%), Postives = 562/650 (86.46%), Query Frame = 0 

Query: 4   QMEDLPERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNTLKSTTD 63
           QMEDLPERYS+NPVLRWNPQVEEYF KAYG E F+ ISKALTRPSCYSCIRVNTLKSTTD
Sbjct: 25  QMEDLPERYSYNPVLRWNPQVEEYFVKAYGAEHFSHISKALTRPSCYSCIRVNTLKSTTD 84

Query: 64  TVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNSITEKFQ 123
           TVIEKLSTIVKEM   NSE+KTL+ GGDVD NGI+LMQS SQRAS+KIEDEK S+TEKFQ
Sbjct: 85  TVIEKLSTIVKEMDRPNSEDKTLV-GGDVDANGIDLMQSDSQRASIKIEDEKKSVTEKFQ 144

Query: 124 HPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 183
           HPSISRCQVPGLDYVVFVRGSGPH IDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV
Sbjct: 145 HPSISRCQVPGLDYVVFVRGSGPHTIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 204

Query: 184 MACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQGTT 243
           MACSAHVEKGD VAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSER+GLYIGQGTT
Sbjct: 205 MACSAHVEKGDAVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERNGLYIGQGTT 264

Query: 244 AMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 303
           AMSRAG FRVS GIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD
Sbjct: 265 AMSRAGIFRVSGGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 324

Query: 304 MCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCSFCNG 363
           MCAAPGGKTTAIAILMKDEGEVIAADRSHNK                             
Sbjct: 325 MCAAPGGKTTAIAILMKDEGEVIAADRSHNK----------------------------- 384

Query: 364 LLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCIDANDG 423
                        VMDIQKLAAEMGLSCI+TYKLDALKSVNRN DSCKGT+SVCIDANDG
Sbjct: 385 -------------VMDIQKLAAEMGLSCIVTYKLDALKSVNRNGDSCKGTSSVCIDANDG 444

Query: 424 VVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRAENSK 483
           VVNN+SNS NL+NV+PSS+TEV + D+T+ QNAKQKK G RPRNGPGRNQCMGGRAENS+
Sbjct: 445 VVNNVSNSMNLNNVEPSSVTEVSEVDKTKMQNAKQKKNGWRPRNGPGRNQCMGGRAENSR 504

Query: 484 GFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKNHAK 543
           GFAPNSFDRVLLDAPCSALGLRPRLFAGE                    ETIASL+NHAK
Sbjct: 505 GFAPNSFDRVLLDAPCSALGLRPRLFAGE--------------------ETIASLRNHAK 564

Query: 544 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLV 603
           YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALD YKFLTLAPQHPRIGGPGLV
Sbjct: 565 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDKYKFLTLAPQHPRIGGPGLV 611

Query: 604 GHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKFSVGSKDSEQ 654
           GHFEFADH VEEWLRPGEEHLVQRFDPSS LDTIGFFIAKFSVG+KD EQ
Sbjct: 625 GHFEFADHFVEEWLRPGEEHLVQRFDPSSPLDTIGFFIAKFSVGAKDFEQ 611

[Close]
BLAST of Lsi04G018870 vs. ExPASy TrEMBL
Match: A0A0A0L1L4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608150 PE=3 SV=1)

HSP 1 Score: 1052.4 bits (2720), Expect = 8.1e-304
Identity = 540/650 (83.08%), Postives = 558/650 (85.85%), Query Frame = 0 

Query: 4   QMEDLPERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNTLKSTTD 63
           QMEDLPERYS+NPVL WNPQVEEYF KAYG E F+ ISKALTRPSCYSCIRVNTLKSTTD
Sbjct: 25  QMEDLPERYSYNPVLIWNPQVEEYFVKAYGAEHFSHISKALTRPSCYSCIRVNTLKSTTD 84

Query: 64  TVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNSITEKFQ 123
           TVIEKLSTIVKEMG SNSENKTL+ GGDVD NGI+LMQS S+RASMKIEDEK  +TEKFQ
Sbjct: 85  TVIEKLSTIVKEMGCSNSENKTLV-GGDVDANGIDLMQSDSRRASMKIEDEKKPVTEKFQ 144

Query: 124 HPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 183
           HPSISRCQVPGLDYVVFVRGSGPH IDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV
Sbjct: 145 HPSISRCQVPGLDYVVFVRGSGPHTIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 204

Query: 184 MACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQGTT 243
           MACSAHVEKGD VAVSVAVEQ G+DGGWSLGITRGTVVQGLPTDPYHSER+GLYIGQGTT
Sbjct: 205 MACSAHVEKGDAVAVSVAVEQRGVDGGWSLGITRGTVVQGLPTDPYHSERNGLYIGQGTT 264

Query: 244 AMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 303
           AMSRAG FRVS GIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD
Sbjct: 265 AMSRAGIFRVSGGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 324

Query: 304 MCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCSFCNG 363
           MCAAPGGKTTAIAILMKDEGEVIAADRSHNK                             
Sbjct: 325 MCAAPGGKTTAIAILMKDEGEVIAADRSHNK----------------------------- 384

Query: 364 LLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCIDANDG 423
                        VMDIQKLAAEMGLSCI TYKLDALKSVNRN DSCKGTASVCIDANDG
Sbjct: 385 -------------VMDIQKLAAEMGLSCIATYKLDALKSVNRNVDSCKGTASVCIDANDG 444

Query: 424 VVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRAENSK 483
           VVNN SNS NLDNV+PSS+TEV + D+T+ QNAKQK  G RPRNGPGRNQCMGGRAENS+
Sbjct: 445 VVNNSSNSMNLDNVEPSSVTEVSEVDKTKMQNAKQKMNGWRPRNGPGRNQCMGGRAENSR 504

Query: 484 GFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKNHAK 543
           GFAPNSFDRVLLDAPCSALGLRPR+FAGE                    ETIASL+NHAK
Sbjct: 505 GFAPNSFDRVLLDAPCSALGLRPRIFAGE--------------------ETIASLRNHAK 564

Query: 544 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLV 603
           YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALD YKFLTLAPQHPRIGGPGLV
Sbjct: 565 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDKYKFLTLAPQHPRIGGPGLV 611

Query: 604 GHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKFSVGSKDSEQ 654
           GHFEFADH VEEWLRPGEEHLVQRFDPSS LDTIGFFIAKFSVG+KD E+
Sbjct: 625 GHFEFADHFVEEWLRPGEEHLVQRFDPSSPLDTIGFFIAKFSVGTKDLEE 611

[Close]
BLAST of Lsi04G018870 vs. ExPASy TrEMBL
Match: A0A6J1FK18 (putative methyltransferase NSUN6 OS=Cucurbita moschata OX=3662 GN=LOC111446444 PE=3 SV=1)

HSP 1 Score: 1025.0 bits (2649), Expect = 1.4e-295
Identity = 527/649 (81.20%), Postives = 548/649 (84.44%), Query Frame = 0 

Query: 4   QMEDLPERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNTLKSTTD 63
           QMEDL ERY FNPVLRWN QVEEYF KAYG E FALISKALTRPSCYSCIRVNTLKSTTD
Sbjct: 25  QMEDLSERYCFNPVLRWNSQVEEYFTKAYGAEHFALISKALTRPSCYSCIRVNTLKSTTD 84

Query: 64  TVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNSITEKFQ 123
           TVI+KLSTIV EMG SNSEN TL  GGD DVNGIEL QS SQ+AS+KI DEKN ITE F+
Sbjct: 85  TVIKKLSTIVTEMGKSNSENTTLK-GGDGDVNGIELTQSGSQKASVKINDEKNPITENFE 144

Query: 124 HPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 183
           HPSISRCQVPGLDYVVFVRGSGPH IDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV
Sbjct: 145 HPSISRCQVPGLDYVVFVRGSGPHTIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 204

Query: 184 MACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQGTT 243
           MACSAHVEKGD VA+SVAVEQPGLDGGWSLGITRGTVVQGLPTDPYH ER GLYIGQGTT
Sbjct: 205 MACSAHVEKGDVVAISVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHPERSGLYIGQGTT 264

Query: 244 AMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 303
           AMSRAG FRV EG+AVDM+NRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD
Sbjct: 265 AMSRAGIFRVCEGVAVDMHNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 324

Query: 304 MCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCSFCNG 363
           MCAAPGGKTTAIAILMKDEGE+IAADRSHNK                             
Sbjct: 325 MCAAPGGKTTAIAILMKDEGEIIAADRSHNK----------------------------- 384

Query: 364 LLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCIDANDG 423
                        VM+IQKLAAEMGLSCI TYKLDALKSVNR TDSCK + SVC+DAND 
Sbjct: 385 -------------VMNIQKLAAEMGLSCIKTYKLDALKSVNRRTDSCKSSDSVCVDANDS 444

Query: 424 VVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRAENSK 483
           VVN+ S+S NLDN KPSSITE+L+ D+  KQNA+ +K G+RPRNGPGRNQCMGGRAENSK
Sbjct: 445 VVNDGSSSMNLDNEKPSSITEILEVDKIRKQNAEGRKNGKRPRNGPGRNQCMGGRAENSK 504

Query: 484 GFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKNHAK 543
           GFAPNSFDRVLLDAPCSALGLRPRLFAGE                    ET+ASLK+HAK
Sbjct: 505 GFAPNSFDRVLLDAPCSALGLRPRLFAGE--------------------ETLASLKHHAK 564

Query: 544 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLV 603
           YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLV
Sbjct: 565 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLV 610

Query: 604 GHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKFSVGSKDSE 653
           G FEFADHS EEWLRPGEEHLVQRFDPSS LDTIGFFIAKFSVGSKDSE
Sbjct: 625 GRFEFADHSGEEWLRPGEEHLVQRFDPSSPLDTIGFFIAKFSVGSKDSE 610

[Close]
BLAST of Lsi04G018870 vs. ExPASy TrEMBL
Match: A0A6J1J149 (putative methyltransferase NSUN6 OS=Cucurbita maxima OX=3661 GN=LOC111480346 PE=3 SV=1)

HSP 1 Score: 1022.7 bits (2643), Expect = 6.9e-295
Identity = 523/649 (80.59%), Postives = 548/649 (84.44%), Query Frame = 0 

Query: 4   QMEDLPERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNTLKSTTD 63
           QMEDL ERY FNPVLRWN QVEEYF KAYG E F LISKALTRPSCYSCIRVNTLKSTTD
Sbjct: 25  QMEDLSERYCFNPVLRWNSQVEEYFTKAYGAEHFTLISKALTRPSCYSCIRVNTLKSTTD 84

Query: 64  TVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNSITEKFQ 123
           TVI+KLSTIV E+G  NSEN TL  GGDVDVNGIEL QS SQ+ASMKI DEKN ITEKFQ
Sbjct: 85  TVIKKLSTIVTEIGKPNSENTTLK-GGDVDVNGIELTQSGSQKASMKINDEKNPITEKFQ 144

Query: 124 HPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 183
           HPSISRCQVPGLDYVVFVRGSGPH IDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV
Sbjct: 145 HPSISRCQVPGLDYVVFVRGSGPHTIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 204

Query: 184 MACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQGTT 243
           MACSAHVEKGD VA+SVAVEQPGLDGGWSLGITRGTVVQGLPTDPYH ER GLYIGQGTT
Sbjct: 205 MACSAHVEKGDVVAISVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHPERSGLYIGQGTT 264

Query: 244 AMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 303
           AMSRAG FRV EG++VDM+NRVFKLPSFYDVL+GEIFLQNLPSIVTAHALDPQKGERILD
Sbjct: 265 AMSRAGIFRVREGVSVDMHNRVFKLPSFYDVLQGEIFLQNLPSIVTAHALDPQKGERILD 324

Query: 304 MCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCSFCNG 363
           MCAAPGGKTTAIAILMKDEGE+IAADRSHNK                             
Sbjct: 325 MCAAPGGKTTAIAILMKDEGEIIAADRSHNK----------------------------- 384

Query: 364 LLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCIDANDG 423
                        VM+IQKLAAEMGLSCI TYKLDALKSVNR TDSCK + SVC+DAND 
Sbjct: 385 -------------VMNIQKLAAEMGLSCIKTYKLDALKSVNRRTDSCKSSDSVCVDANDS 444

Query: 424 VVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRAENSK 483
           VVN+ S+S NLDN KPSSITE+L+ D+  KQNA+ +  G+RPRNGPGRNQCMGGRAENSK
Sbjct: 445 VVNDSSSSMNLDNEKPSSITEILEVDKIRKQNAEGRNNGKRPRNGPGRNQCMGGRAENSK 504

Query: 484 GFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKNHAK 543
           GFAPNSFDRVLLDAPCSALGLRPRLFAGE                    ET+ASLK+HAK
Sbjct: 505 GFAPNSFDRVLLDAPCSALGLRPRLFAGE--------------------ETLASLKHHAK 564

Query: 544 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLV 603
           YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPR+GGPGLV
Sbjct: 565 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRVGGPGLV 610

Query: 604 GHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKFSVGSKDSE 653
           G FEFADHSVEEWLRPGEE+LVQRFDPSS LDTIGFFIAKFSVGSKD+E
Sbjct: 625 GRFEFADHSVEEWLRPGEEYLVQRFDPSSPLDTIGFFIAKFSVGSKDAE 610

[Close]
BLAST of Lsi04G018870 vs. NCBI nr
Match: XP_038899621.1 (tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X1 [Benincasa hispida])

HSP 1 Score: 1096.6 bits (2835), Expect = 0.0e+00
Identity = 567/661 (85.78%), Postives = 576/661 (87.14%), Query Frame = 0 

Query: 1   MAQQMEDLPERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNTLKS 60
           MAQQMEDLPERYS+NPVLRWNPQVEEYF KAYG E FALISKALTRPSCYSCIRVNTLKS
Sbjct: 48  MAQQMEDLPERYSYNPVLRWNPQVEEYFVKAYGAEHFALISKALTRPSCYSCIRVNTLKS 107

Query: 61  TTDTVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNSITE 120
           TTDTVIEKLSTIVKEMGHSNSENKTL+ GGDV+VNGIELMQS SQRASMKIEDEKNSITE
Sbjct: 108 TTDTVIEKLSTIVKEMGHSNSENKTLV-GGDVNVNGIELMQSGSQRASMKIEDEKNSITE 167

Query: 121 KFQHPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYV 180
           KFQHPSISRCQVPGLDYVVFVRGSGPH IDYGYANGRPPKEVIVSRKCAEAVLRGAQVYV
Sbjct: 168 KFQHPSISRCQVPGLDYVVFVRGSGPHTIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYV 227

Query: 181 PGVMACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQ 240
           PGVMACSAHVEKGD VAVSVAVEQPGLDGGWSLGITRGTVVQGL TDPYHSER+GLYIGQ
Sbjct: 228 PGVMACSAHVEKGDAVAVSVAVEQPGLDGGWSLGITRGTVVQGLLTDPYHSERNGLYIGQ 287

Query: 241 GTTAMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGER 300
           GTTAMSRAG FRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGER
Sbjct: 288 GTTAMSRAGIFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGER 347

Query: 301 ILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCSF 360
           ILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNK                          
Sbjct: 348 ILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNK-------------------------- 407

Query: 361 CNGLLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCIDA 420
                           VMDI+KLAAEMGLSCI+TYKLDALKSVNRNTDSCKGTASVCIDA
Sbjct: 408 ----------------VMDIKKLAAEMGLSCIVTYKLDALKSVNRNTDSCKGTASVCIDA 467

Query: 421 NDGVVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRAE 480
           N+GVVN  SNS  LDNVKPSSITEV + DET+ QNAK KK GRR RNGPGRNQCMGGRAE
Sbjct: 468 NEGVVN--SNSMKLDNVKPSSITEVSEVDETKMQNAKGKKNGRRLRNGPGRNQCMGGRAE 527

Query: 481 NSKGFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKN 540
           NSKGFAPNSFDRVLLDAPCSALGLRPRLFAGE                    ETI SLKN
Sbjct: 528 NSKGFAPNSFDRVLLDAPCSALGLRPRLFAGE--------------------ETITSLKN 587

Query: 541 HAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGP 600
           HAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGP
Sbjct: 588 HAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGP 643

Query: 601 GLVGHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKFSVGSKDSEQRDHLVNA 660
           GLVGHFEFADHSVEEWLRPGEEHLVQRFDPSS LDTIGFFIAKFSVGSKDSEQ DHL NA
Sbjct: 648 GLVGHFEFADHSVEEWLRPGEEHLVQRFDPSSPLDTIGFFIAKFSVGSKDSEQEDHLANA 643

Query: 661 L 662
           L
Sbjct: 708 L 643

[Close]
BLAST of Lsi04G018870 vs. NCBI nr
Match: XP_038899622.1 (tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X2 [Benincasa hispida])

HSP 1 Score: 1091.3 bits (2821), Expect = 0.0e+00
Identity = 564/658 (85.71%), Postives = 573/658 (87.08%), Query Frame = 0 

Query: 4   QMEDLPERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNTLKSTTD 63
           QMEDLPERYS+NPVLRWNPQVEEYF KAYG E FALISKALTRPSCYSCIRVNTLKSTTD
Sbjct: 25  QMEDLPERYSYNPVLRWNPQVEEYFVKAYGAEHFALISKALTRPSCYSCIRVNTLKSTTD 84

Query: 64  TVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNSITEKFQ 123
           TVIEKLSTIVKEMGHSNSENKTL+ GGDV+VNGIELMQS SQRASMKIEDEKNSITEKFQ
Sbjct: 85  TVIEKLSTIVKEMGHSNSENKTLV-GGDVNVNGIELMQSGSQRASMKIEDEKNSITEKFQ 144

Query: 124 HPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 183
           HPSISRCQVPGLDYVVFVRGSGPH IDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV
Sbjct: 145 HPSISRCQVPGLDYVVFVRGSGPHTIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 204

Query: 184 MACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQGTT 243
           MACSAHVEKGD VAVSVAVEQPGLDGGWSLGITRGTVVQGL TDPYHSER+GLYIGQGTT
Sbjct: 205 MACSAHVEKGDAVAVSVAVEQPGLDGGWSLGITRGTVVQGLLTDPYHSERNGLYIGQGTT 264

Query: 244 AMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 303
           AMSRAG FRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD
Sbjct: 265 AMSRAGIFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 324

Query: 304 MCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCSFCNG 363
           MCAAPGGKTTAIAILMKDEGEVIAADRSHNK                             
Sbjct: 325 MCAAPGGKTTAIAILMKDEGEVIAADRSHNK----------------------------- 384

Query: 364 LLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCIDANDG 423
                        VMDI+KLAAEMGLSCI+TYKLDALKSVNRNTDSCKGTASVCIDAN+G
Sbjct: 385 -------------VMDIKKLAAEMGLSCIVTYKLDALKSVNRNTDSCKGTASVCIDANEG 444

Query: 424 VVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRAENSK 483
           VVN  SNS  LDNVKPSSITEV + DET+ QNAK KK GRR RNGPGRNQCMGGRAENSK
Sbjct: 445 VVN--SNSMKLDNVKPSSITEVSEVDETKMQNAKGKKNGRRLRNGPGRNQCMGGRAENSK 504

Query: 484 GFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKNHAK 543
           GFAPNSFDRVLLDAPCSALGLRPRLFAGE                    ETI SLKNHAK
Sbjct: 505 GFAPNSFDRVLLDAPCSALGLRPRLFAGE--------------------ETITSLKNHAK 564

Query: 544 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLV 603
           YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLV
Sbjct: 565 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLV 617

Query: 604 GHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKFSVGSKDSEQRDHLVNAL 662
           GHFEFADHSVEEWLRPGEEHLVQRFDPSS LDTIGFFIAKFSVGSKDSEQ DHL NAL
Sbjct: 625 GHFEFADHSVEEWLRPGEEHLVQRFDPSSPLDTIGFFIAKFSVGSKDSEQEDHLANAL 617

[Close]
BLAST of Lsi04G018870 vs. NCBI nr
Match: KAA0032867.1 (putative methyltransferase NSUN6 isoform X1 [Cucumis melo var. makuwa] >TYK09408.1 putative methyltransferase NSUN6 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1065.8 bits (2755), Expect = 1.5e-307
Identity = 545/653 (83.46%), Postives = 565/653 (86.52%), Query Frame = 0 

Query: 1   MAQQMEDLPERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNTLKS 60
           MAQQMEDLPERYS+NPVLRWNPQVEEYF KAYG E F+ ISKALTRPSCYSCIRVNTLKS
Sbjct: 1   MAQQMEDLPERYSYNPVLRWNPQVEEYFVKAYGAEHFSHISKALTRPSCYSCIRVNTLKS 60

Query: 61  TTDTVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNSITE 120
           TTDTVIEKLSTIVKEM   NSE+KTL+ GGDVD NGI+LMQS SQRAS+KIEDEK S+TE
Sbjct: 61  TTDTVIEKLSTIVKEMDRPNSEDKTLV-GGDVDANGIDLMQSDSQRASIKIEDEKKSVTE 120

Query: 121 KFQHPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYV 180
           KFQHPSISRCQVPGLDYVVFVRGSGPH IDYGYANGRPPKEVIVSRKCAEAVLRGAQVYV
Sbjct: 121 KFQHPSISRCQVPGLDYVVFVRGSGPHTIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYV 180

Query: 181 PGVMACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQ 240
           PGVMACSAHVEKGD VAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSER+GLYIGQ
Sbjct: 181 PGVMACSAHVEKGDAVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERNGLYIGQ 240

Query: 241 GTTAMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGER 300
           GTTAMSRAG FRVS GIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGER
Sbjct: 241 GTTAMSRAGIFRVSGGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGER 300

Query: 301 ILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCSF 360
           ILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNK                          
Sbjct: 301 ILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNK-------------------------- 360

Query: 361 CNGLLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCIDA 420
                           VMDIQKLAAEMGLSCI+TYKLDALKSVNRN DSCKGT+SVCIDA
Sbjct: 361 ----------------VMDIQKLAAEMGLSCIVTYKLDALKSVNRNGDSCKGTSSVCIDA 420

Query: 421 NDGVVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRAE 480
           NDGVVNN+SNS NL+NV+PSS+TEV + D+T+ QNAKQKK G RPRNGPGRNQCMGGRAE
Sbjct: 421 NDGVVNNVSNSMNLNNVEPSSVTEVSEVDKTKMQNAKQKKNGWRPRNGPGRNQCMGGRAE 480

Query: 481 NSKGFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKN 540
           NS+GFAPNSFDRVLLDAPCSALGLRPRLFAGE                    ETIASL+N
Sbjct: 481 NSRGFAPNSFDRVLLDAPCSALGLRPRLFAGE--------------------ETIASLRN 540

Query: 541 HAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGP 600
           HAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALD YKFLTLAPQHPRIGGP
Sbjct: 541 HAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDKYKFLTLAPQHPRIGGP 590

Query: 601 GLVGHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKFSVGSKDSEQ 654
           GLVGHFEFADH VEEWLRPGEEHLVQRFDPSS LDTIGFFIAKFSVG+KD EQ
Sbjct: 601 GLVGHFEFADHFVEEWLRPGEEHLVQRFDPSSPLDTIGFFIAKFSVGAKDFEQ 590

[Close]
BLAST of Lsi04G018870 vs. NCBI nr
Match: XP_008466789.1 (PREDICTED: putative methyltransferase NSUN6 isoform X1 [Cucumis melo])

HSP 1 Score: 1060.4 bits (2741), Expect = 6.1e-306
Identity = 542/650 (83.38%), Postives = 562/650 (86.46%), Query Frame = 0 

Query: 4   QMEDLPERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNTLKSTTD 63
           QMEDLPERYS+NPVLRWNPQVEEYF KAYG E F+ ISKALTRPSCYSCIRVNTLKSTTD
Sbjct: 25  QMEDLPERYSYNPVLRWNPQVEEYFVKAYGAEHFSHISKALTRPSCYSCIRVNTLKSTTD 84

Query: 64  TVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNSITEKFQ 123
           TVIEKLSTIVKEM   NSE+KTL+ GGDVD NGI+LMQS SQRAS+KIEDEK S+TEKFQ
Sbjct: 85  TVIEKLSTIVKEMDRPNSEDKTLV-GGDVDANGIDLMQSDSQRASIKIEDEKKSVTEKFQ 144

Query: 124 HPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 183
           HPSISRCQVPGLDYVVFVRGSGPH IDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV
Sbjct: 145 HPSISRCQVPGLDYVVFVRGSGPHTIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 204

Query: 184 MACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQGTT 243
           MACSAHVEKGD VAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSER+GLYIGQGTT
Sbjct: 205 MACSAHVEKGDAVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERNGLYIGQGTT 264

Query: 244 AMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 303
           AMSRAG FRVS GIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD
Sbjct: 265 AMSRAGIFRVSGGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 324

Query: 304 MCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCSFCNG 363
           MCAAPGGKTTAIAILMKDEGEVIAADRSHNK                             
Sbjct: 325 MCAAPGGKTTAIAILMKDEGEVIAADRSHNK----------------------------- 384

Query: 364 LLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCIDANDG 423
                        VMDIQKLAAEMGLSCI+TYKLDALKSVNRN DSCKGT+SVCIDANDG
Sbjct: 385 -------------VMDIQKLAAEMGLSCIVTYKLDALKSVNRNGDSCKGTSSVCIDANDG 444

Query: 424 VVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRAENSK 483
           VVNN+SNS NL+NV+PSS+TEV + D+T+ QNAKQKK G RPRNGPGRNQCMGGRAENS+
Sbjct: 445 VVNNVSNSMNLNNVEPSSVTEVSEVDKTKMQNAKQKKNGWRPRNGPGRNQCMGGRAENSR 504

Query: 484 GFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKNHAK 543
           GFAPNSFDRVLLDAPCSALGLRPRLFAGE                    ETIASL+NHAK
Sbjct: 505 GFAPNSFDRVLLDAPCSALGLRPRLFAGE--------------------ETIASLRNHAK 564

Query: 544 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLV 603
           YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALD YKFLTLAPQHPRIGGPGLV
Sbjct: 565 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDKYKFLTLAPQHPRIGGPGLV 611

Query: 604 GHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKFSVGSKDSEQ 654
           GHFEFADH VEEWLRPGEEHLVQRFDPSS LDTIGFFIAKFSVG+KD EQ
Sbjct: 625 GHFEFADHFVEEWLRPGEEHLVQRFDPSSPLDTIGFFIAKFSVGAKDFEQ 611

[Close]
BLAST of Lsi04G018870 vs. NCBI nr
Match: XP_011653980.1 (tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X1 [Cucumis sativus] >KGN54939.1 hypothetical protein Csa_012449 [Cucumis sativus])

HSP 1 Score: 1052.4 bits (2720), Expect = 1.7e-303
Identity = 540/650 (83.08%), Postives = 558/650 (85.85%), Query Frame = 0 

Query: 4   QMEDLPERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNTLKSTTD 63
           QMEDLPERYS+NPVL WNPQVEEYF KAYG E F+ ISKALTRPSCYSCIRVNTLKSTTD
Sbjct: 25  QMEDLPERYSYNPVLIWNPQVEEYFVKAYGAEHFSHISKALTRPSCYSCIRVNTLKSTTD 84

Query: 64  TVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNSITEKFQ 123
           TVIEKLSTIVKEMG SNSENKTL+ GGDVD NGI+LMQS S+RASMKIEDEK  +TEKFQ
Sbjct: 85  TVIEKLSTIVKEMGCSNSENKTLV-GGDVDANGIDLMQSDSRRASMKIEDEKKPVTEKFQ 144

Query: 124 HPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 183
           HPSISRCQVPGLDYVVFVRGSGPH IDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV
Sbjct: 145 HPSISRCQVPGLDYVVFVRGSGPHTIDYGYANGRPPKEVIVSRKCAEAVLRGAQVYVPGV 204

Query: 184 MACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLYIGQGTT 243
           MACSAHVEKGD VAVSVAVEQ G+DGGWSLGITRGTVVQGLPTDPYHSER+GLYIGQGTT
Sbjct: 205 MACSAHVEKGDAVAVSVAVEQRGVDGGWSLGITRGTVVQGLPTDPYHSERNGLYIGQGTT 264

Query: 244 AMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 303
           AMSRAG FRVS GIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD
Sbjct: 265 AMSRAGIFRVSGGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 324

Query: 304 MCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHKCSFCNG 363
           MCAAPGGKTTAIAILMKDEGEVIAADRSHNK                             
Sbjct: 325 MCAAPGGKTTAIAILMKDEGEVIAADRSHNK----------------------------- 384

Query: 364 LLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSVNRNTDSCKGTASVCIDANDG 423
                        VMDIQKLAAEMGLSCI TYKLDALKSVNRN DSCKGTASVCIDANDG
Sbjct: 385 -------------VMDIQKLAAEMGLSCIATYKLDALKSVNRNVDSCKGTASVCIDANDG 444

Query: 424 VVNNISNSTNLDNVKPSSITEVLQADETEKQNAKQKKYGRRPRNGPGRNQCMGGRAENSK 483
           VVNN SNS NLDNV+PSS+TEV + D+T+ QNAKQK  G RPRNGPGRNQCMGGRAENS+
Sbjct: 445 VVNNSSNSMNLDNVEPSSVTEVSEVDKTKMQNAKQKMNGWRPRNGPGRNQCMGGRAENSR 504

Query: 484 GFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKNHAK 543
           GFAPNSFDRVLLDAPCSALGLRPR+FAGE                    ETIASL+NHAK
Sbjct: 505 GFAPNSFDRVLLDAPCSALGLRPRIFAGE--------------------ETIASLRNHAK 564

Query: 544 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLV 603
           YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALD YKFLTLAPQHPRIGGPGLV
Sbjct: 565 YQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDKYKFLTLAPQHPRIGGPGLV 611

Query: 604 GHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKFSVGSKDSEQ 654
           GHFEFADH VEEWLRPGEEHLVQRFDPSS LDTIGFFIAKFSVG+KD E+
Sbjct: 625 GHFEFADHFVEEWLRPGEEHLVQRFDPSSPLDTIGFFIAKFSVGTKDLEE 611

[Close]
BLAST of Lsi04G018870 vs. TAIR 10
Match: AT1G06560.1 (NOL1/NOP2/sun family protein )

HSP 1 Score: 686.4 bits (1770), Expect = 2.2e-197
Identity = 375/666 (56.31%), Postives = 446/666 (66.97%), Query Frame = 0 

Query: 1   MAQQMEDLP---ERYSFNPVLRWNPQVEEYFAKAYGEEQFALISKALTRPSCYSCIRVNT 60
           ++ QME  P   ERY ++PVLRWNP+VE+YF KAYG + FA ISKALTRPS YSCIRVNT
Sbjct: 33  ISHQMEMGPSDSERYCYDPVLRWNPEVEDYFTKAYGPDHFARISKALTRPSSYSCIRVNT 92

Query: 61  LKSTTDTVIEKLSTIVKEMGHSNSENKTLMGGGDVDVNGIELMQSVSQRASMKIEDEKNS 120
           +K+T+D VIEKL+ I+ +                    G++L+Q           D  + 
Sbjct: 93  VKTTSDAVIEKLTKILND-----------------SEEGLKLVQ----------PDGSSP 152

Query: 121 ITEKFQHPSISRCQVPGLDYVVFVRGSGPHAIDYGYANGRPPKEVIVSRKCAEAVLRGAQ 180
           +T         +CQ+PGLDYVVFV GSGPH I+Y      PPKEV+VSRKCAEAVLRGAQ
Sbjct: 153 VT---------KCQIPGLDYVVFVNGSGPHKIEYDSGLENPPKEVLVSRKCAEAVLRGAQ 212

Query: 181 VYVPGVMACSAHVEKGDTVAVSVAVEQPGLDGGWSLGITRGTVVQGLPTDPYHSERHGLY 240
           VYVPGV+AC+AHVEKGD VAV VA+EQPG +G WS+ +TRGT +QGLPTDPY+ ER GLY
Sbjct: 213 VYVPGVLACTAHVEKGDAVAVCVAMEQPGDEGDWSVNMTRGTTLQGLPTDPYYRERSGLY 272

Query: 241 IGQGTTAMSRAGTFRVSEGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQK 300
           IG GT  +SRAG FRV  GIAVD+N+RVF+LPS +++LEGEIFLQNLPSI+ AHALDPQK
Sbjct: 273 IGMGTAMLSRAGMFRVPNGIAVDLNHRVFRLPSLHNILEGEIFLQNLPSIIVAHALDPQK 332

Query: 301 GERILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKKRAFLLLSVSHMPYLNHGAIFHK 360
           GERILDMCAAPGGKTTAIAILM DEGE++AADRSHNK                       
Sbjct: 333 GERILDMCAAPGGKTTAIAILMNDEGEIVAADRSHNK----------------------- 392

Query: 361 CSFCNGLLSLLILHQTCVQVMDIQKLAAEMGLSCIITYKLDALKSV------NRNTDSCK 420
                              V+ +Q L+AEMG +CI T KLDALKSV      N +T    
Sbjct: 393 -------------------VLVVQNLSAEMGFTCITTCKLDALKSVCLPTTLNESTILIN 452

Query: 421 GTASVCIDANDGVVNNISNSTNLDNVKPSSITEVLQADETEKQN-------AKQKKYGRR 480
           G  S  + ++  + +N    T++ + +  +     + D TE+ N       A  +K   R
Sbjct: 453 GDNSSSMTSHSELSSN-EEMTSVTSRRSEADKSCEKNDSTEQPNGGDNVSQAYIRKNKGR 512

Query: 481 PRNGPGRNQCMGGRAENSKGFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLE 540
            +NG GR QC GGRA  S+GF PNSFDRVLLDAPCSALGLRPRLFAG             
Sbjct: 513 LKNGRGRTQCQGGRAGKSQGFPPNSFDRVLLDAPCSALGLRPRLFAG------------- 572

Query: 541 VNNILVCQETIASLKNHAKYQRRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDT 600
                   ET+ SL+NH  YQR+M DQAVQLVR GG++VYSTCTINP ENEA+VRYALD 
Sbjct: 573 -------LETVVSLRNHGWYQRKMLDQAVQLVRVGGILVYSTCTINPSENEAVVRYALDK 599

Query: 601 YKFLTLAPQHPRIGGPGLVGHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKF 651
           Y+FL+LAPQHPRIGGPGLVG  EF D  +EEWL+PGEE LVQ+FDPSS LDTIGFFIAKF
Sbjct: 633 YRFLSLAPQHPRIGGPGLVGRCEFPDGYIEEWLKPGEEELVQKFDPSSELDTIGFFIAKF 599

[Close]
BLAST of Lsi04G018870 vs. TAIR 10
Match: AT3G13180.1 (NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein )

HSP 1 Score: 66.6 bits (161), Expect = 8.4e-11
Identity = 52/172 (30.23%), Postives = 73/172 (42.44%), Query Frame = 0 

Query: 490 FDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLKNHAKYQRRMF 549
           +D+VLLDAPCS LG    + +   +L    RW  ++ ++L             K Q  + 
Sbjct: 402 YDKVLLDAPCSGLG----VLSKRADL----RWNRKLEDML----------ELTKLQDELL 461

Query: 550 DQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHPRIGGPGLVGHFEFA 609
           D A +LV+ GGV+VYSTC+I+P ENE  V   L  +   T+ P                 
Sbjct: 462 DSASKLVKHGGVLVYSTCSIDPEENEGRVEAFLLRHPEFTIDP----------------- 521

Query: 610 DHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAKFSVGSKDSEQRDHLVNAL 662
                          V  F PSS + + GFF++     S D      LV AL
Sbjct: 522 ---------------VTSFVPSSFVTSQGFFLSNPVKHSLDGAFAARLVRAL 523


HSP 2 Score: 51.6 bits (122), Expect = 2.8e-06
Identity = 26/70 (37.14%), Postives = 39/70 (55.71%), Query Frame = 0 

Query: 276 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKK 335
           EG   +Q+  + +    + PQ GERI+D CAAPGGKT  +A  +K +G + A D +  + 
Sbjct: 309 EGICSVQDESAGLIVSVVKPQPGERIMDACAAPGGKTLFMASCLKGQGMIYAMDVNEGRL 368

Query: 336 RAFLLLSVSH 346
           R     + SH
Sbjct: 369 RILGETAKSH 378

[Close]
BLAST of Lsi04G018870 vs. TAIR 10
Match: AT5G55920.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 1.9e-10
Identity = 93/393 (23.66%), Postives = 130/393 (33.08%), Query Frame = 0 

Query: 273 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGEVIAADRSH 332
           + L G   LQ   S +   AL P++ ERI+D+ AAPGGKTT IA LMK+ G + A +   
Sbjct: 335 EYLAGYYMLQGASSFLPVMALAPRENERIVDVAAAPGGKTTYIAALMKNTGLIYANE--- 394

Query: 333 NKKRAFLLLSVSHMPYLNHGAIFHKCSFCNGLLSLLILHQTCVQVMDIQKLAAEMGLSCI 392
                                                                       
Sbjct: 395 ------------------------------------------------------------ 454

Query: 393 ITYKLDALKSVNRNTDSCKGTASVCIDANDGVVNNISNSTNLDNVKPSSITEVLQADETE 452
              K+  LKS+  N                GV N I                        
Sbjct: 455 --MKVPRLKSLTANLHRM------------GVTNTI------------------------ 514

Query: 453 KQNAKQKKYGRRPRNGPGRNQCMGGRAENSKGFAPNSFDRVLLDAPCSALGLRPRLFAGE 512
                                C     E  K    N+ DRVLLDAPCS  G+        
Sbjct: 515 --------------------VCNYDGRELPKVLGQNTVDRVLLDAPCSGTGI-------- 574

Query: 513 VELLHSDRWKLEVNNILVCQETIASLKNHAKYQRRMFDQAVQLV----RPGGVIVYSTCT 572
                     +  +  +   +T+  +K  A  Q+++   A+ +V    + GG IVYSTC+
Sbjct: 575 ----------ISKDESVKITKTMDEIKKFAHLQKQLLLAAIDMVDANSKTGGYIVYSTCS 575

Query: 573 INPGENEALVRYALD--TYKFLTLAPQHPRIGGPGLVGHFEFADHSVEEWLRPGEEHLVQ 632
           I   ENEA++ YAL     K +T           G  G   F +H  +  L        +
Sbjct: 635 IMVTENEAVIDYALKKRDVKLVTCGLDF------GRKGFTRFREHRFQPSL-----DKTR 575

Query: 633 RFDPS-SSLDTIGFFIAKFSVGS---KDSEQRD 656
           RF P   ++D  GFF+AK    S   + SE+ D
Sbjct: 695 RFYPHVHNMD--GFFVAKLKKMSNVKQSSEEGD 575

[Close]
BLAST of Lsi04G018870 vs. TAIR 10
Match: AT4G26600.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 3.2e-10
Identity = 52/168 (30.95%), Postives = 73/168 (43.45%), Query Frame = 0 

Query: 480 ENSKGFAPNSFDRVLLDAPCSALGLRPRLFAGEVELLHSDRWKLEVNNILVCQETIASLK 539
           E +K    +S DRVLLDAPCS  G+                  +  +  +   ++   +K
Sbjct: 404 ELTKVLGQSSVDRVLLDAPCSGTGV------------------ISKDESVKTSKSADDIK 463

Query: 540 NHAKYQRRMFDQAVQLV----RPGGVIVYSTCTINPGENEALVRYALDTYKFLTLAPQHP 599
             A  Q+++   A+ LV    + GG IVYSTC++   ENEA++ YAL   + + L P   
Sbjct: 464 KFAHLQKQLILGAIDLVDANSKTGGYIVYSTCSVMIPENEAVIDYALKN-RDVKLVPCGL 523

Query: 600 RIGGPGLVGHFEFADHSVEEWLRPGEEHLVQRFDPSSSLDTIGFFIAK 644
             G PG     E   H   E  R    H V   D        GFF+AK
Sbjct: 524 DFGRPGFSSFREHRFHPSLEKTRRFYPH-VHNMD--------GFFVAK 543


HSP 2 Score: 54.3 bits (129), Expect = 4.3e-07
Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 0 

Query: 273 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGEVIA 328
           + L G   LQ+  S +   AL P++ ER++DM AAPGGKTT +A LMK+ G + A
Sbjct: 318 EYLAGFYMLQSASSFLPVMALAPREKERVVDMAAAPGGKTTYVAALMKNTGIIYA 372

[Close]
BLAST of Lsi04G018870 vs. TAIR 10
Match: AT5G26180.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 1.8e-08
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0 

Query: 274 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGEVIAADRSHN 333
           V  G IFLQ   S + A AL PQ G  +LD C+APG KT  +A LM+ +G++IA + +  
Sbjct: 281 VANGRIFLQGKASSMVAAALQPQAGWEVLDACSAPGNKTIHLAALMEGQGKIIACELNEE 340

Query: 334 K 335
           +
Sbjct: 341 R 341

The following BLAST results are available for this feature:
BLAST of Lsi04G018870 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84MA13.2e-19656.31rRNA (cytosine-C(5))-methyltransferase NOP2C OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q7TS681.2e-5430.20tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 OS=Mus musculus OX=10090 GN=Nsu... [more]
Q8TEA17.6e-4927.96tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 OS=Homo sapiens OX=9606 GN=NSUN... [more]
O577126.7e-2923.52tRNA (cytosine(72)-C(5))-methyltransferase OS=Pyrococcus horikoshii (strain ATCC... [more]
Q9V1061.1e-1037.89tRNA (cytosine(49)-C(5))-methyltransferase OS=Pyrococcus abyssi (strain GE5 / Or... [more]
BLAST of Lsi04G018870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SU667.1e-30883.46Putative methyltransferase NSUN6 isoform X1 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CS063.0e-30683.38putative methyltransferase NSUN6 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504... [more]
A0A0A0L1L48.1e-30483.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608150 PE=3 SV=1[more]
A0A6J1FK181.4e-29581.20putative methyltransferase NSUN6 OS=Cucurbita moschata OX=3662 GN=LOC111446444 P... [more]
A0A6J1J1496.9e-29580.59putative methyltransferase NSUN6 OS=Cucurbita maxima OX=3661 GN=LOC111480346 PE=... [more]
BLAST of Lsi04G018870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899621.10.0e+0085.78tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X1 [Benincasa hispida][more]
XP_038899622.10.0e+0085.71tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X2 [Benincasa hispida][more]
KAA0032867.11.5e-30783.46putative methyltransferase NSUN6 isoform X1 [Cucumis melo var. makuwa] >TYK09408... [more]
XP_008466789.16.1e-30683.38PREDICTED: putative methyltransferase NSUN6 isoform X1 [Cucumis melo][more]
XP_011653980.11.7e-30383.08tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X1 [Cucumis sativus] >K... [more]
BLAST of Lsi04G018870 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G06560.12.2e-19756.31NOL1/NOP2/sun family protein [more]
AT3G13180.18.4e-1130.23NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein [more]
AT5G55920.11.9e-1023.66S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
AT4G26600.13.2e-1030.95S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
AT5G26180.11.8e-0844.26S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023267RNA (C5-cytosine) methyltransferasePRINTSPR02008RCMTFAMILYcoord: 302..312
score: 80.66
coord: 559..575
score: 58.66
IPR036974PUA domain superfamilyGENE3D2.30.130.10PUA domaincoord: 156..265
e-value: 4.2E-12
score: 47.6
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 287..659
e-value: 4.7E-52
score: 178.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..478
NoneNo IPR availablePANTHERPTHR22807:SF64BNAA08G28690D PROTEINcoord: 376..648
NoneNo IPR availablePANTHERPTHR22807NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGcoord: 5..79
coord: 376..648
NoneNo IPR availablePANTHERPTHR22807:SF64BNAA08G28690D PROTEINcoord: 126..335
NoneNo IPR availablePANTHERPTHR22807NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGcoord: 126..335
NoneNo IPR availablePANTHERPTHR22807:SF64BNAA08G28690D PROTEINcoord: 5..79
NoneNo IPR availablePROSITEPS50890PUAcoord: 159..266
score: 12.242409
IPR002478PUA domainPFAMPF01472PUAcoord: 161..198
e-value: 5.8E-6
score: 26.2
IPR001678SAM-dependent methyltransferase RsmB/NOP2-typePFAMPF01189Methyltr_RsmB-Fcoord: 291..334
e-value: 1.2E-13
score: 51.2
coord: 486..592
e-value: 4.3E-15
score: 55.9
IPR001678SAM-dependent methyltransferase RsmB/NOP2-typePROSITEPS51686SAM_MT_RSMB_NOPcoord: 212..334
score: 10.265385
IPR001678SAM-dependent methyltransferase RsmB/NOP2-typePROSITEPS51686SAM_MT_RSMB_NOPcoord: 488..647
score: 19.421387
IPR018314Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved sitePROSITEPS01153NOL1_NOP2_SUNcoord: 490..501
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 480..644
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 255..583
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 160..262

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G018870.1Lsi04G018870.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001510 RNA methylation
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003723 RNA binding