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Lsi04G017690 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTTTTATTGCTCTAACTAAACCCTAAACCCTTTAATTACTCTGACTAATTGGTCATCTGATTTCCAGATTTTATCAAGGAAGGTCATGATCAGTACGTTTACCGCCACGCAAACGGGTAACGATTTTGATATCTCTTTTAGTTTATCCGATGAACAATTTCCCGCTCATCGTATTTACTATTTTGCCTGTCTTTCTTATTCTAGCTTGTGTGTGATCGGCTTGGCTGCTACGCATATTGCATTCAAAGACAGTGGCGGTGTCACGGCCGTTGATTTCAATGTAGGGAAATCCGATCGCAGCAGCTTTAAAGTCACTGGGAAACGCAAGAAGGTATAGAAATGGTAATTACGGACTTGCGAACTGGTTCGTGTTACTTGGTGATTAAAGAAACAGTGTTGCTAGAAACTAACCTATATACATTGTGATAAAATCTCACTTACTCTTAAGGTGCTGGTTTCGCCTCGTGTGAGTTATGTTGCCTTGGATTTTATGAAATTATCGTCATTAGAAGATTATGTCAATTTCCTATATGATTGTTTATGAACTATATCATAATTCACCATATCACAGACAGTAACATGTTTCAGAACCAGCCTTGGCTTGTGGAGTTCTTTTGTCATAATGGAGGTTTCTTTTTAGTAGAATTTTGATGAACCATAAGAACTGGCATCAGTAGGTTTTACATATATGATAGCCAAACTTTTACTAAATTTCTTTTTGCACTTCTTTACACCTTCAACTTGAAATTTAAAACTCCTGTCCTGTTTGTGAATCTGGATACTGGGATTTAATTATCTGTGCTGAAGTCACTAGTGTTATTTTGCAGAATGCGCAATTCTTTGAGCCCAATTCTGCTCTATGTAAAGTCTGCACCAAAGAGGCTTCTTATATTGTAAGGTTGGATCTTTTGGCTTTTCACCAATTCTGATAACGACATGTCATTTAGCTTCTCTTCAATTGCAACTCAGATCTTTTATGTTATTGTTAGGTGTTCTGTTAAAGGTTCTCTATTGGAAGTAAATGATCGCTTAATAAAGCAGCCAGAGTTGCTCAACACTGTGGTGAGGATAACCTTTTAATTTTATGGCCAATTGGGGTTTAAGAATATTAATTGCTGATACTGTAGTTTGCAAAAACGTGGTTGTTATGCATTCCTATGAGCACGCTACATTACTAATATTTGTCTTATCCCAGATTTTAAAAATCACATGTGGAAGATAACGCTGATATAGTAGCAGATTTACTGTATTAGATCGGCTGAATGAAATTTTACACTGTTACTTCTTTATAGTTTGTGGGTAGATGAGTTCCCTTGTTAGATTTTTCTTTTTATTGTACTAACACAGGCAAGAAAAGCAACTGCTGTTGAAATTTCTAACTAATGCTTAAGCGGAAAATTTCCCAGAAACTTTTGGAGGAAAAGATTGTTCTGATTTTTACTATTGTCACCGATTATTACATATAGTATGAAATTATATTGAAGCAAATTAGAAGAAGGGAAAGAAAGCATGTCTTCCTTTCTTATTTGTAACTTTATGCTATGAAAACAAGAAGAGCCAGTCATCTTTAGTGTTCATTTTCGATTCGCTTACCTTAAGGGGAAAAAATACAAACAAGATTTATACATGTTCAAATGACTTGACTTTTTATATTATGACAGGCTCACAGAGAAGGGTATATTGCTATTGTTATGCCAAAAGCAGCAGACTGGCTTAAAGTGAAGGAGTCATTGCTGAGCCTTGAACAATACAAAAGATTGAGAGAGGTGCACTGAGTCATTCATCCGCATACAGAAACAAGTAACTTTTAGATTTCTTCCATTGATGCTTTCCTCCATCTGTTCTTTAACTCGCCAGGTTTATCTCGTAGCATATTTTAACAGGACTGCCGAGTGATAATAATTCACTCAATTCTGGTAAGCTTGAGAATATATTATATATAGGGTTTGAACTTTCAATCCTTATATCTTCCAGTTTTGGTAGTTGAACTTTATAAAAAGTCTTTGGTCCTTGCCACTTAATTTCAGCACTTCACTTAGCAAAAATCTCATGTAGCATCATCATCATGTAGCCTTTTATTCAAGATTTTTATTAAATAGAATATAAGACTTTGACAAAATGACC ATGGAGGAAGGTCATGATCAGTACGTTTACCGCCACGCAAACGGCTTGTGTGTGATCGGCTTGGCTGCTACGCATATTGCATTCAAAGACAGTGGCGGTGTCACGGCCGTTGATTTCAATGTAGGGAAATCCGATCGCAGCAGCTTTAAAGTCACTGGGAAACGCAAGAAGGCTCACAGAGAAGGGTATATTGCTATTGTTATGCCAAAAGCAGCAGACTGGCTTAAAGTGAAGGAGTCATTGCTGAGCCTTGAACAATACAAAAGATTGAGAGAGGTGCACTGAGTCATTCATCCGCATACAGAAACAAGTAACTTTTAGATTTCTTCCATTGATGCTTTCCTCCATCTGTTCTTTAACTCGCCAGGTTTATCTCGTAGCATATTTTAACAGGACTGCCGAGTGATAATAATTCACTCAATTCTGGTAAGCTTGAGAATATATTATATATAGGGTTTGAACTTTCAATCCTTATATCTTCCAGTTTTGGTAGTTGAACTTTATAAAAAGTCTTTGGTCCTTGCCACTTAATTTCAGCACTTCACTTAGCAAAAATCTCATGTAGCATCATCATCATGTAGCCTTTTATTCAAGATTTTTATTAAATAGAATATAAGACTTTGACAAAATGACC ATGGAGGAAGGTCATGATCAGTACGTTTACCGCCACGCAAACGGCTTGTGTGTGATCGGCTTGGCTGCTACGCATATTGCATTCAAAGACAGTGGCGGTGTCACGGCCGTTGATTTCAATGTAGGGAAATCCGATCGCAGCAGCTTTAAAGTCACTGGGAAACGCAAGAAGGCTCACAGAGAAGGGTATATTGCTATTGTTATGCCAAAAGCAGCAGACTGGCTTAAAGTGAAGGAGTCATTGCTGAGCCTTGAACAATACAAAAGATTGAGAGAGGTGCACTGA MEEGHDQYVYRHANGLCVIGLAATHIAFKDSGGVTAVDFNVGKSDRSSFKVTGKRKKAHREGYIAIVMPKAADWLKVKESLLSLEQYKRLREVH Homology
BLAST of Lsi04G017690 vs. ExPASy TrEMBL
Match: A0A1S4E5T9 (Actin-binding transcription modulator OS=Cucumis melo OX=3656 GN=LOC103503860 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.5e-35 Identity = 87/142 (61.27%), Postives = 92/142 (64.79%), Query Frame = 0
BLAST of Lsi04G017690 vs. ExPASy TrEMBL
Match: A0A5A7VCI3 (Actin-binding transcription modulator OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001340 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.5e-35 Identity = 87/142 (61.27%), Postives = 92/142 (64.79%), Query Frame = 0
BLAST of Lsi04G017690 vs. ExPASy TrEMBL
Match: A0A5D3E6L9 (Actin-binding transcription modulator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007830 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.5e-35 Identity = 87/142 (61.27%), Postives = 92/142 (64.79%), Query Frame = 0
BLAST of Lsi04G017690 vs. ExPASy TrEMBL
Match: A0A6J1CMG0 (Actin-binding transcription modulator OS=Momordica charantia OX=3673 GN=LOC111012618 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.5e-35 Identity = 86/141 (60.99%), Postives = 92/141 (65.25%), Query Frame = 0
BLAST of Lsi04G017690 vs. ExPASy TrEMBL
Match: A0A7J6H0B3 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012438 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 6.0e-35 Identity = 70/93 (75.27%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of Lsi04G017690 vs. NCBI nr
Match: XP_038896120.1 (protein Abitram [Benincasa hispida] >XP_038896121.1 protein Abitram [Benincasa hispida] >XP_038896122.1 protein Abitram [Benincasa hispida]) HSP 1 Score: 160.6 bits (405), Expect = 6.5e-36 Identity = 89/142 (62.68%), Postives = 94/142 (66.20%), Query Frame = 0
BLAST of Lsi04G017690 vs. NCBI nr
Match: KAA0063309.1 (protein Simiate [Cucumis melo var. makuwa]) HSP 1 Score: 157.1 bits (396), Expect = 7.2e-35 Identity = 87/142 (61.27%), Postives = 92/142 (64.79%), Query Frame = 0
BLAST of Lsi04G017690 vs. NCBI nr
Match: XP_022142526.1 (protein Simiate [Momordica charantia]) HSP 1 Score: 157.1 bits (396), Expect = 7.2e-35 Identity = 86/141 (60.99%), Postives = 92/141 (65.25%), Query Frame = 0
BLAST of Lsi04G017690 vs. NCBI nr
Match: XP_008466465.1 (PREDICTED: protein Simiate [Cucumis melo] >XP_016903582.1 PREDICTED: protein Simiate [Cucumis melo] >TYK31468.1 protein Simiate [Cucumis melo var. makuwa]) HSP 1 Score: 157.1 bits (396), Expect = 7.2e-35 Identity = 87/142 (61.27%), Postives = 92/142 (64.79%), Query Frame = 0
BLAST of Lsi04G017690 vs. NCBI nr
Match: KAF4388461.1 (hypothetical protein F8388_012438 [Cannabis sativa]) HSP 1 Score: 156.4 bits (394), Expect = 1.2e-34 Identity = 70/93 (75.27%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of Lsi04G017690 vs. TAIR 10
Match: AT1G75980.1 (Single hybrid motif superfamily protein ) HSP 1 Score: 127.5 bits (319), Expect = 5.7e-30 Identity = 69/140 (49.29%), Postives = 81/140 (57.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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