Lsi04G016670 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAATCTTGTCATCAATAAAAATGTCACTATGTTGATAATATAACCTACCTTTACAGTCTTAAACAACTTTGAGAATCGTCATCTATCAAACTTGTGGGTTTAATAAACTCTGCTCTGTTTGAAAACGCCCTTAACCAATGTGGCGTGGCGTTTGTCAGTTGTAATAATGTTTTTATTGTATAAAACTTGTGCTATTTGACAGATAATTTTGGGATCATCTTCAGTGGCTCGTAGGAAAATATTATCTGAGATGGGTTATGAATTCACCATTATGGTATATTCTCTACCTAGATGTACTTACATGACCTGTAAACTCTCCCTTCTCAAAATGTTTAACTTTTCCTCTCCCAAAATGAAGTCTGCAGATATTGATGAGAAAGCCATACGCAAAGAAAAGCCGGAAGAGTTGGTTGTGGCTCTTGCTGAAGCAAAGGTTAGGTGTCCTCTTGCATTATATTTGTGCTTCACCATATTTTGTGACTGAAGTATTACTGAATATGTTATTAGTCCCCCCCCTTTTCTAAATTGCTTGTGATACATGAGCACCGTCGCCAAAAGAAGATTTTAGATATAAAATTTGTCTTTTGTTCCATGCTAACACGACATCTAGGATTTAGAAACTTCTGTTAGCTGCATAACATTTCTAAAGTCATCCTATAGTGGATACAATGATTTGCATAGTTTGGATATTACGCTTCACGTTAAAGAACAAATAGAGTACAAAAATGAAAAATTTGACTAACCCTTCAAGCCAGGGACGTGGATTCCAAATCTTAATGAGCTGGAAATGTGGCCACATTCATCTCTTTTGCATCTGTTCGTGTTTTTTCATTCCCCCTTTAAAATCTCTATGTATAAATGTAAATTGGCATGTGATTATTTTTGCACGAGCAACTTGTATTAATTAGGCATGAGTTTCATCTCAGGCTGATGCCATCATATCCAATTTTCAAAAAATTCATACACATGAAAAGGAAGCAGAACCAACAGTTTTGATTGCTGCTGACACAGTATGTTTTCCTATGTTAGTGTCAGTCTTTATTCTCTGTGTTGAACAATCTGGTGCATGATGGCTTGTATCACATGGGGCCATTTATAAATTGAGGATACAGTCACAACGGCCCACTTTAAGATAGGATTTGTTTCCTCGGAATTAATCTGATTTGGTGTGCAACTTTTTCTTCCCTCTTTGAAGTCTTAATTGTAACTGCTTCATGCCAAAGCTTCTTCCGCTTTCACAATTTTAGTACGGAGTTTGGTTGTGGTAGCAGATGTTATTTCTTAGCTGATGGATATTTATTGTCAGGCAGATGCCATCTTAGGAAGACTTTCCACGGATGATTTTAAGAAGGATGCAGAGCCAACACTATTGATTACTTCTGATCAAGTATCTATATCAAGTCCTTTGACATCCGTCCGTTTTTATATGTCTTAAGTGATTTTTTAATTTTCGACTTGAATGATGTAGATAAAATTTTTGTGCGTTCATTGCACATCTTTCTCTACCTGACTGGCTGACTCATAAAAGATAATTAGAGATTTGTTTCCTTCTAAATTGGCATGTTGATTTGTTGCCTTATTATTTACATCTCCCCAATATGTCTTTTTAATTTAAAAAAGGACGATAATAAAAAGTTGATTAGAATGATTTTCATATCTGACATCTGTTTCTTTATTTTTCTTCATATTTTGTGACTTGTGAGAAATTTTCTTGAATCCAGCCTATAATGATAAGTTGATGCTTGATAGTCTTTCCTCAGTCTCCGCCCCCTTCACCAATAATCAGATTAAATAGATTGCCAATCCCATGTGAAAAACCTGCCGCCACTCTTTGTGCCCCTGTTGACCCATTTACCTTGAGATAGAAGTTGACGGAACAATTCTCTTGTTATATTTTTATTCTTAGACCCGTTGTCTATTGTACCCTCAAAACATAAATGGTCTTTTCGTGATAACTTATGCCATAACGACACTTTCTTGTTCTGTTTGCAAAGTTCCTCTTAGACATACTTTCTTACTTCTATTGGTAATTGATGTGGAGGTGGTGATCTATGAAGGTGTCATCAGAGAAAAACCAGCCAGCAAGGAGGAAGCACGACAATTTATGAAAGGTTTGTTTATATAATATTAATGAATTTCTATTTTCTTTACTATTTCTTGAGTGCTTTTGTTCGATAAAAAATTATGTTGCAGATTATTCAGGAGGGCATGCAGCCACACTTGGATCTGTACTTGTTACAAACCTCAAAACAGGATTTAGGAAAGGAGAATGGGATCGAGTAGAGGTATATATATACATATTTTTTTTATCTGTTGATGATCTTTATATTTCTTGTTTACTAGTTCACGTTTCTCTCTATCATTTCCCTCTATAATATTAACGAAAAGACACTCATGTTGTTGAGACTGCTACGTTCTAATTGACTAAACAAATAGAACATATCCTACTTTCATAGACATACTATAAACTTCTTCTACAAGACAACTCGCTTGGTATGTGCTCTGCTGTGGGACCAGCAGTATAGATGCTAGACACTGTTATTTTTTAACGAGTAAGGAGCTTCCTGTTCTGCTTCTATCCAACATCGATTTTGATTCCTAGCAACTGGTAGTCGACTCCTTGAAGATTTTGGTTCTGTTTTACAATACCACACGTTTCTTTGTTTTCTTATGTTGTCCGATATTAACATGTGCTCTTACAGATCTTTTTCAATGAAATACCTGATGAAGTCATCGACAAGCTGGTAGGGATTTCACTTTACAGCTTGACGTTGCTCATGTTTTCGTTAGGAAAATGAAACATTGAATGTATCTTTTGTGATCTTGAACTTTTTTTCTTTACATTTCAGGTCGAGGAGGGGACTGTGCTCAATGTTGCTGGAGGGCTGATTATCGAGCATCCTTTAATTTTACCGTATGTGAAAGAAGTGGTTAGTTTCCCTTCGTTCTTCCTTTCCTATTGACAATGACCTCAAGCTTTTATTCATACATGGAATCCATCATTTCGGAAGAAGCATCCAGCTAGTGATATTGCTTGCATTCATTTACTTGCTTCATTGGTTGTGTTTCATCTGAACCTTGAATAAAATATTCCTATAGATCCTCCTAGTGGTTTGAATTCCATGTATATGATGTGTACGTGGCATGCATGTACGTGATAATGAGAGCTCATATGACAAATATTCACGTGTAGATATTGCGAAATTACATATAGATGACGATTGATATGATAAGTTAAACTGGGTATCTAGGGATTAAAAAAAGGTATCTAAAAAAGGCTGCACACAGCTTACTGTGAAGAAAAAAAAAAGGGTCAGCCATACCGGTTAATTTAATTTTAGTATTTATTTATTTATTTTCAAAATAAGTGTTGTATCACATGGGTAAACGTGCATATGCACACAAGGTTTTTCTGTCTATAAATCCTGAAGATCAAGACTCTTTTTGTCTGAAAACGTGATATAGTTTTACATATTGATATGGCCTAAGAAGCACGGACACTTTAGTTTGGCTAGCGTGTCCGTGTCTGACACGTGTCGGATACTCCGACACTTCGACACTTGTTGGACACGCATCGGACACTTGTTAGTGTAACAAATGTGTTAGACATGCATTGAACACTTGTTGAGTAAACTAAAAAGACACTTATATGGCAATAATAATAACTTGTGAGTGTGAAATACATCAAGGTAAGTCTTTTAAGCATATAAATGCATCATATTTTGGTATGAAAATGATATATACTTTTAAAAATGTATGTTTTAATAAACGTGTCCTTGCCGTGTCGTGTCCTAGATATTTAAAATATGGCGTGTCGCCGTGTCCGTGTCGTGTCATATCCGTGTCTTGTATTCGTGTCCGTGCTTATTAGGATATGGCCAACAAATCGGTTGGGACATCCAGAAATATGCTCATCGTTCTCGATGTCTTGGTAGATAACTTGGGAACTTTTGATCTCTGCAGGTAGGGACGACAGATAGTGTGATGGGTCTTCCTAAGGCTCTGACTGAGAAACTCTTGAAGGAAGCCATATAGGTGCTGTGGATAATATCACATTTCACCTTTAACTTATTTTCTAATCAAACATCTCTTTCTTTTCCATTGGGGAATAGTCAGCCTAACCTGACAATCTATTATTCTTGCTTCCTGTGGACTTCGGTAACAATCAACTATTATTTGTATTAGCAATCTTATTATCAGTTAAAGATTTAAGAACAAACTTGTATCTCTTTTGAACTCGTATCCTCACTTTATAGTTGGTATGATCTGGCTTTCCCCCCCCCGTGAAAGGAGGCCGTTTCTTTCTTTCTTTCATACTATTAAAGAAAAATTAAATTGTATTTATAAACTATGCATCTAACAATCATGAGTGATGGTCATATTGCATAATTTTTCCCCA ATGTCTAATCTTGTCATCAATAAAAATATAATTTTGGGATCATCTTCAGTGGCTCGTAGGAAAATATTATCTGAGATGGGTTATGAATTCACCATTATGGTATATTCTCTACCTAGATGTACTTACATGACCTGTAAACTCTCCCTTCTCAAAATGTTTAACTTTTCCTCTCCCAAAATGAAGTCTGCAGATATTGATGAGAAAGCCATACGCAAAGAAAAGCCGGAAGAGTTGGTTGTGGCTCTTGCTGAAGCAAAGGCTGATGCCATCATATCCAATTTTCAAAAAATTCATACACATGAAAAGGAAGCAGAACCAACAGTTTTGATTGCTGCTGACACAGCAGATGCCATCTTAGGAAGACTTTCCACGGATGATTTTAAGAAGGATGCAGAGCCAACACTATTGATTACTTCTGATCAAACCCGTTGTCTATTGTACCCTCAAAACATAAATGGTCTTTTCGTGATAACTTATGCCATAACGACACTTTCTTGTTCTGTTTGCAAAGTTCCTCTTAGACATACTTTCTTACTTCTATTGGTAATTGATGTGGAGGTGGTGATCTATGAAGGTGTCATCAGAGAAAAACCAGCCAGCAAGGAGGAAGCACGACAATTTATGAAAGATTATTCAGGAGGGCATGCAGCCACACTTGGATCTGTACTTGTTACAAACCTCAAAACAGGATTTAGGAAAGGAGAATGGGATCGAGTAGAGATCTTTTTCAATGAAATACCTGATGAAGTCATCGACAAGCTGGTCGAGGAGGGGACTGTGCTCAATGTTGCTGGAGGGCTGATTATCGAGCATCCTTTAATTTTACCGTATGTGAAAGAAGTGGTAGGGACGACAGATAGTGTGATGGGTCTTCCTAAGGCTCTGACTGAGAAACTCTTGAAGGAAGCCATATAGGTGCTGTGGATAATATCACATTTCACCTTTAACTTATTTTCTAATCAAACATCTCTTTCTTTTCCATTGGGGAATAGTCAGCCTAACCTGACAATCTATTATTCTTGCTTCCTGTGGACTTCGGTAACAATCAACTATTATTTGTATTAGCAATCTTATTATCAGTTAAAGATTTAAGAACAAACTTGTATCTCTTTTGAACTCGTATCCTCACTTTATAGTTGGTATGATCTGGCTTTCCCCCCCCCGTGAAAGGAGGCCGTTTCTTTCTTTCTTTCATACTATTAAAGAAAAATTAAATTGTATTTATAAACTATGCATCTAACAATCATGAGTGATGGTCATATTGCATAATTTTTCCCCA ATGTCTAATCTTGTCATCAATAAAAATATAATTTTGGGATCATCTTCAGTGGCTCGTAGGAAAATATTATCTGAGATGGGTTATGAATTCACCATTATGGTATATTCTCTACCTAGATGTACTTACATGACCTGTAAACTCTCCCTTCTCAAAATGTTTAACTTTTCCTCTCCCAAAATGAAGTCTGCAGATATTGATGAGAAAGCCATACGCAAAGAAAAGCCGGAAGAGTTGGTTGTGGCTCTTGCTGAAGCAAAGGCTGATGCCATCATATCCAATTTTCAAAAAATTCATACACATGAAAAGGAAGCAGAACCAACAGTTTTGATTGCTGCTGACACAGCAGATGCCATCTTAGGAAGACTTTCCACGGATGATTTTAAGAAGGATGCAGAGCCAACACTATTGATTACTTCTGATCAAACCCGTTGTCTATTGTACCCTCAAAACATAAATGGTCTTTTCGTGATAACTTATGCCATAACGACACTTTCTTGTTCTGTTTGCAAAGTTCCTCTTAGACATACTTTCTTACTTCTATTGGTAATTGATGTGGAGGTGGTGATCTATGAAGGTGTCATCAGAGAAAAACCAGCCAGCAAGGAGGAAGCACGACAATTTATGAAAGATTATTCAGGAGGGCATGCAGCCACACTTGGATCTGTACTTGTTACAAACCTCAAAACAGGATTTAGGAAAGGAGAATGGGATCGAGTAGAGATCTTTTTCAATGAAATACCTGATGAAGTCATCGACAAGCTGGTCGAGGAGGGGACTGTGCTCAATGTTGCTGGAGGGCTGATTATCGAGCATCCTTTAATTTTACCGTATGTGAAAGAAGTGGTAGGGACGACAGATAGTGTGATGGGTCTTCCTAAGGCTCTGACTGAGAAACTCTTGAAGGAAGCCATATAG MSNLVINKNIILGSSSVARRKILSEMGYEFTIMVYSLPRCTYMTCKLSLLKMFNFSSPKMKSADIDEKAIRKEKPEELVVALAEAKADAIISNFQKIHTHEKEAEPTVLIAADTADAILGRLSTDDFKKDAEPTLLITSDQTRCLLYPQNINGLFVITYAITTLSCSVCKVPLRHTFLLLLVIDVEVVIYEGVIREKPASKEEARQFMKDYSGGHAATLGSVLVTNLKTGFRKGEWDRVEIFFNEIPDEVIDKLVEEGTVLNVAGGLIIEHPLILPYVKEVVGTTDSVMGLPKALTEKLLKEAI Homology
BLAST of Lsi04G016670 vs. ExPASy Swiss-Prot
Match: Q54TC5 (7-methyl-GTP pyrophosphatase OS=Dictyostelium discoideum OX=44689 GN=DDB_G0281937 PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.3e-19 Identity = 76/296 (25.68%), Postives = 129/296 (43.58%), Query Frame = 0
BLAST of Lsi04G016670 vs. ExPASy Swiss-Prot
Match: Q823U1 (dTTP/UTP pyrophosphatase OS=Chlamydophila caviae (strain ATCC VR-813 / DSM 19441 / GPIC) OX=227941 GN=CCA_00314 PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.5e-04 Identity = 34/116 (29.31%), Postives = 60/116 (51.72%), Query Frame = 0
BLAST of Lsi04G016670 vs. ExPASy Swiss-Prot
Match: Q253S7 (dTTP/UTP pyrophosphatase OS=Chlamydia felis (strain Fe/C-56) OX=264202 GN=CF0689 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 2.0e-04 Identity = 35/116 (30.17%), Postives = 58/116 (50.00%), Query Frame = 0
BLAST of Lsi04G016670 vs. ExPASy Swiss-Prot
Match: Q9PK45 (Nucleoside triphosphate pyrophosphatase OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=TC_0628 PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 3.4e-04 Identity = 34/124 (27.42%), Postives = 60/124 (48.39%), Query Frame = 0
BLAST of Lsi04G016670 vs. ExPASy Swiss-Prot
Match: Q47JQ0 (dTTP/UTP pyrophosphatase OS=Dechloromonas aromatica (strain RCB) OX=159087 GN=Daro_0172 PE=3 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 9.9e-04 Identity = 35/112 (31.25%), Postives = 52/112 (46.43%), Query Frame = 0
BLAST of Lsi04G016670 vs. ExPASy TrEMBL
Match: A0A1S3CRP6 (maf-like protein DDB_G0281937 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503944 PE=3 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 8.5e-99 Identity = 214/295 (72.54%), Postives = 216/295 (73.22%), Query Frame = 0
BLAST of Lsi04G016670 vs. ExPASy TrEMBL
Match: A0A6J1BSP3 (maf-like protein DDB_G0281937 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005415 PE=3 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 8.0e-97 Identity = 207/295 (70.17%), Postives = 216/295 (73.22%), Query Frame = 0
BLAST of Lsi04G016670 vs. ExPASy TrEMBL
Match: A0A5A7TDU8 (Maf-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00450 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.9e-91 Identity = 214/349 (61.32%), Postives = 216/349 (61.89%), Query Frame = 0
BLAST of Lsi04G016670 vs. ExPASy TrEMBL
Match: A0A6J1A9J0 (maf-like protein DDB_G0281937 isoform X1 OS=Herrania umbratica OX=108875 GN=LOC110416109 PE=3 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 1.3e-83 Identity = 177/295 (60.00%), Postives = 205/295 (69.49%), Query Frame = 0
BLAST of Lsi04G016670 vs. ExPASy TrEMBL
Match: E0CQD4 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g12540 PE=3 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 6.5e-83 Identity = 174/295 (58.98%), Postives = 206/295 (69.83%), Query Frame = 0
BLAST of Lsi04G016670 vs. NCBI nr
Match: XP_011652416.1 (7-methyl-GTP pyrophosphatase [Cucumis sativus]) HSP 1 Score: 374.8 bits (961), Expect = 7.1e-100 Identity = 215/295 (72.88%), Postives = 218/295 (73.90%), Query Frame = 0
BLAST of Lsi04G016670 vs. NCBI nr
Match: KAE8651328.1 (hypothetical protein Csa_000804 [Cucumis sativus]) HSP 1 Score: 374.8 bits (961), Expect = 7.1e-100 Identity = 215/295 (72.88%), Postives = 218/295 (73.90%), Query Frame = 0
BLAST of Lsi04G016670 vs. NCBI nr
Match: XP_008466560.1 (PREDICTED: maf-like protein DDB_G0281937 isoform X1 [Cucumis melo]) HSP 1 Score: 370.2 bits (949), Expect = 1.8e-98 Identity = 214/295 (72.54%), Postives = 216/295 (73.22%), Query Frame = 0
BLAST of Lsi04G016670 vs. NCBI nr
Match: XP_038905433.1 (7-methyl-GTP pyrophosphatase isoform X4 [Benincasa hispida]) HSP 1 Score: 369.0 bits (946), Expect = 3.9e-98 Identity = 210/295 (71.19%), Postives = 218/295 (73.90%), Query Frame = 0
BLAST of Lsi04G016670 vs. NCBI nr
Match: XP_022132591.1 (maf-like protein DDB_G0281937 isoform X1 [Momordica charantia]) HSP 1 Score: 363.6 bits (932), Expect = 1.6e-96 Identity = 207/295 (70.17%), Postives = 216/295 (73.22%), Query Frame = 0
BLAST of Lsi04G016670 vs. TAIR 10
Match: AT5G42770.2 (Maf-like protein ) HSP 1 Score: 257.7 bits (657), Expect = 1.2e-68 Identity = 153/295 (51.86%), Postives = 186/295 (63.05%), Query Frame = 0
BLAST of Lsi04G016670 vs. TAIR 10
Match: AT5G42770.1 (Maf-like protein ) HSP 1 Score: 219.9 bits (559), Expect = 2.7e-57 Identity = 137/295 (46.44%), Postives = 167/295 (56.61%), Query Frame = 0
BLAST of Lsi04G016670 vs. TAIR 10
Match: AT5G66550.1 (Maf-like protein ) HSP 1 Score: 200.7 bits (509), Expect = 1.7e-51 Identity = 122/295 (41.36%), Postives = 158/295 (53.56%), Query Frame = 0
BLAST of Lsi04G016670 vs. TAIR 10
Match: AT2G25500.1 (Inosine triphosphate pyrophosphatase family protein ) HSP 1 Score: 77.0 bits (188), Expect = 2.9e-14 Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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